PMD report

Problems found

#	File	Line	Problem
1	src/RunGui.java	8	All classes and interfaces must belong to a named package
2	src/RunGui.java	9	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
3	src/RunGui.java	11	Parameter 'args' is not assigned and could be declared final
4	src/Server.java	33	All classes and interfaces must belong to a named package
5	src/Server.java	33	The class 'Server' has a Cyclomatic Complexity of 7 (Highest = 16).
6	src/Server.java	35	The Logger variable declaration does not contain the static and final modifiers
7	src/Server.java	37	It is somewhat confusing to have a field name matching the declaring class name
8	src/Server.java	38	Avoid unused private fields such as 'maxProcessors'.
9	src/Server.java	39	Avoid excessively long variable names like noOfAllowedConnections
10	src/Server.java	39	Variables that are final and static should be in all caps.
11	src/Server.java	41	Avoid unused private fields such as 'paths'.
12	src/Server.java	43	Avoid using implementation types like 'HashMap'; use the interface instead
13	src/Server.java	43	Avoid using implementation types like 'HashMap'; use the interface instead
14	src/Server.java	45	Avoid really long methods.
15	src/Server.java	45	The method 'main' has a Cyclomatic Complexity of 16.
16	src/Server.java	47	Found 'DD'-anomaly for variable 'portNo' (lines '47'-'58').
17	src/Server.java	50	Local variable 'paths' could be declared final
18	src/Server.java	54	Found 'DU'-anomaly for variable 'clientNo' (lines '54'-'185').
19	src/Server.java	57	Avoid using if statements without curly braces
20	src/Server.java	62	Local variable 'loggingFile' could be declared final
21	src/Server.java	87	Local variable 'clientUpdaterPort' could be declared final
22	src/Server.java	92	Found 'DD'-anomaly for variable 'clientConnection' (lines '92'-'96').
23	src/Server.java	105	Avoid instantiating new objects inside loops
24	src/Server.java	105	Local variable 'objectInput' could be declared final
25	src/Server.java	106	Local variable 'analysisRequested' could be declared final
26	src/Server.java	117	Avoid instantiating new objects inside loops
27	src/Server.java	127	Avoid instantiating new objects inside loops
28	src/Server.java	140	Avoid excessively long variable names like requestProcessingThread
29	src/Server.java	140	Avoid instantiating new objects inside loops
30	src/Server.java	140	Avoid using ThreadGroup; it is not thread safe
31	src/Server.java	140	To be compliant to J2EE, a webapp should not use any thread.
32	src/Server.java	140	To be compliant to J2EE, a webapp should not use any thread.
33	src/Server.java	152	Avoid using exceptions as flow control.
34	src/Server.java	156	Avoid using if statements without curly braces
35	src/Server.java	162	Avoid using if statements without curly braces
36	src/Server.java	168	Avoid using if statements without curly braces
37	src/Server.java	176	System.exit() should not be used in J2EE/JEE apps
38	src/Server.java	198	A method should have only one exit point, and that should be the last statement in the method
39	src/att/grappa/Attribute.java	55	The class 'Attribute' has a Cyclomatic Complexity of 7 (Highest = 33).
40	src/att/grappa/Attribute.java	73	Parameter 'newHandler' is not assigned and could be declared final
41	src/att/grappa/Attribute.java	74	Local variable 'oldHandler' could be declared final
42	src/att/grappa/Attribute.java	80	Found non-transient, non-static member. Please mark as transient or provide accessors.
43	src/att/grappa/Attribute.java	82	Found non-transient, non-static member. Please mark as transient or provide accessors.
44	src/att/grappa/Attribute.java	87	Found non-transient, non-static member. Please mark as transient or provide accessors.
45	src/att/grappa/Attribute.java	89	Found non-transient, non-static member. Please mark as transient or provide accessors.
46	src/att/grappa/Attribute.java	89	It is somewhat confusing to have a field name with the same name as a method
47	src/att/grappa/Attribute.java	92	Found non-transient, non-static member. Please mark as transient or provide accessors.
48	src/att/grappa/Attribute.java	106	Parameter 'attrName' is not assigned and could be declared final
49	src/att/grappa/Attribute.java	106	Parameter 'attrValue' is not assigned and could be declared final
50	src/att/grappa/Attribute.java	106	Parameter 'elemType' is not assigned and could be declared final
51	src/att/grappa/Attribute.java	123	Parameter 'attr' is not assigned and could be declared final
52	src/att/grappa/Attribute.java	136	Unnecessary final modifier in final class
53	src/att/grappa/Attribute.java	145	Unnecessary final modifier in final class
54	src/att/grappa/Attribute.java	154	Unnecessary final modifier in final class
55	src/att/grappa/Attribute.java	163	Unnecessary final modifier in final class
56	src/att/grappa/Attribute.java	175	Unnecessary final modifier in final class
57	src/att/grappa/Attribute.java	176	A switch with less than 3 branches is inefficient, use a if statement instead.
58	src/att/grappa/Attribute.java	176	Switch statements should have a default label
59	src/att/grappa/Attribute.java	181	Assigning an Object to null is a code smell. Consider refactoring.
60	src/att/grappa/Attribute.java	197	Avoid reassigning parameters such as 'attrValue'
61	src/att/grappa/Attribute.java	197	The method 'setValue' has a Cyclomatic Complexity of 11.
62	src/att/grappa/Attribute.java	198	Found 'DD'-anomaly for variable 'changed' (lines '198'-'212').
63	src/att/grappa/Attribute.java	198	Found 'DD'-anomaly for variable 'changed' (lines '198'-'217').
64	src/att/grappa/Attribute.java	198	Found 'DD'-anomaly for variable 'changed' (lines '198'-'223').
65	src/att/grappa/Attribute.java	199	Found 'DD'-anomaly for variable 'isString' (lines '199'-'202').
66	src/att/grappa/Attribute.java	199	Found 'DU'-anomaly for variable 'isString' (lines '199'-'232').
67	src/att/grappa/Attribute.java	200	Found 'DD'-anomaly for variable 'oldValue' (lines '200'-'203').
68	src/att/grappa/Attribute.java	200	Found 'DD'-anomaly for variable 'oldValue' (lines '200'-'206').
69	src/att/grappa/Attribute.java	201	No need to check for null before an instanceof
70	src/att/grappa/Attribute.java	202	Found 'DU'-anomaly for variable 'isString' (lines '202'-'232').
71	src/att/grappa/Attribute.java	210	Avoid if (x != y) ..; else ..;
72	src/att/grappa/Attribute.java	212	Avoid assignments in operands
73	src/att/grappa/Attribute.java	214	Assigning an Object to null is a code smell. Consider refactoring.
74	src/att/grappa/Attribute.java	217	Avoid assignments in operands
75	src/att/grappa/Attribute.java	219	Assigning an Object to null is a code smell. Consider refactoring.
76	src/att/grappa/Attribute.java	223	Avoid assignments in operands
77	src/att/grappa/Attribute.java	224	Assigning an Object to null is a code smell. Consider refactoring.
78	src/att/grappa/Attribute.java	225	Assigning an Object to null is a code smell. Consider refactoring.
79	src/att/grappa/Attribute.java	240	The method name and parameter number are suspiciously close to equals(Object)
80	src/att/grappa/Attribute.java	242	A method should have only one exit point, and that should be the last statement in the method
81	src/att/grappa/Attribute.java	245	A method should have only one exit point, and that should be the last statement in the method
82	src/att/grappa/Attribute.java	248	A method should have only one exit point, and that should be the last statement in the method
83	src/att/grappa/Attribute.java	250	Local variable 'attrValue' could be declared final
84	src/att/grappa/Attribute.java	252	A method should have only one exit point, and that should be the last statement in the method
85	src/att/grappa/Attribute.java	255	A method should have only one exit point, and that should be the last statement in the method
86	src/att/grappa/Attribute.java	275	Local variable 'attrValue' could be declared final
87	src/att/grappa/Attribute.java	338	Avoid really long methods.
88	src/att/grappa/Attribute.java	338	Found 'UR'-anomaly for variable 'strbuf' (lines '338'-'338').
89	src/att/grappa/Attribute.java	338	The method 'convertValue' has a Cyclomatic Complexity of 33.
90	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'344').
91	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'351').
92	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'358').
93	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'365').
94	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'372').
95	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'387').
96	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'395').
97	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'402').
98	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'409').
99	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'416').
100	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'423').
101	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'430').
102	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'437').
103	src/att/grappa/Attribute.java	339	Found 'DD'-anomaly for variable 'stringValue' (lines '339'-'444').
104	src/att/grappa/Attribute.java	339	Found 'DU'-anomaly for variable 'stringValue' (lines '339'-'459').
105	src/att/grappa/Attribute.java	346	The String literal "value of attribute \"" appears 26 times in this file; the first occurrence is on line 346
106	src/att/grappa/Attribute.java	360	The String literal "\" is not an instance of Integer" appears 9 times in this file; the first occurrence is on line 360
107	src/att/grappa/Attribute.java	378	Consider replacing this Hashtable with the newer java.util.Map
108	src/att/grappa/Attribute.java	379	Local variable 'strbuf' could be declared final
109	src/att/grappa/Attribute.java	380	Consider replacing this Hashtable with the newer java.util.Map
110	src/att/grappa/Attribute.java	380	Local variable 'keys' could be declared final
111	src/att/grappa/Attribute.java	383	Avoid using if statements without curly braces
112	src/att/grappa/Attribute.java	443	Avoid if (x != y) ..; else ..;
113	src/att/grappa/Attribute.java	446	Avoid throwing raw exception types.
114	src/att/grappa/Attribute.java	454	Avoid throwing raw exception types.
115	src/att/grappa/Attribute.java	475	Avoid reassigning parameters such as 'stringValue'
116	src/att/grappa/Attribute.java	475	The method 'convertStringValue' has a Cyclomatic Complexity of 29.
117	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'479').
118	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'486').
119	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'489').
120	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'492').
121	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'496').
122	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'503').
123	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'511').
124	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'514').
125	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'522').
126	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'529').
127	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'532').
128	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'535').
129	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'543').
130	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'546').
131	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'549').
132	src/att/grappa/Attribute.java	476	Found 'DD'-anomaly for variable 'value' (lines '476'-'553').
133	src/att/grappa/Attribute.java	476	Found 'DU'-anomaly for variable 'value' (lines '476'-'565').
134	src/att/grappa/Attribute.java	478	String.trim().length()==0 is an inefficient way to validate an empty String.
135	src/att/grappa/Attribute.java	492	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
136	src/att/grappa/Attribute.java	496	Found 'DU'-anomaly for variable 'value' (lines '496'-'565').
137	src/att/grappa/Attribute.java	499	New exception is thrown in catch block, original stack trace may be lost
138	src/att/grappa/Attribute.java	503	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
139	src/att/grappa/Attribute.java	507	Consider replacing this Hashtable with the newer java.util.Map
140	src/att/grappa/Attribute.java	512	Consider replacing this Hashtable with the newer java.util.Map
141	src/att/grappa/Attribute.java	517	Consider replacing this Hashtable with the newer java.util.Map
142	src/att/grappa/Attribute.java	522	Found 'DU'-anomaly for variable 'value' (lines '522'-'565').
143	src/att/grappa/Attribute.java	525	New exception is thrown in catch block, original stack trace may be lost
144	src/att/grappa/Attribute.java	535	Avoid assignments in operands
145	src/att/grappa/Attribute.java	535	Found 'DD'-anomaly for variable 'value' (lines '535'-'537').
146	src/att/grappa/Attribute.java	537	Avoid assignments in operands
147	src/att/grappa/Attribute.java	537	Found 'DU'-anomaly for variable 'value' (lines '537'-'565').
148	src/att/grappa/Attribute.java	552	Avoid if (x != y) ..; else ..;
149	src/att/grappa/Attribute.java	555	Avoid throwing raw exception types.
150	src/att/grappa/Attribute.java	580	Avoid really long methods.
151	src/att/grappa/Attribute.java	580	The method 'copyValue' has a Cyclomatic Complexity of 31.
152	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'586').
153	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'593').
154	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'600').
155	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'607').
156	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'614').
157	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'621').
158	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'628').
159	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'635').
160	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'642').
161	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'649').
162	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'656').
163	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'663').
164	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'670').
165	src/att/grappa/Attribute.java	581	Found 'DD'-anomaly for variable 'copy_value' (lines '581'-'677').
166	src/att/grappa/Attribute.java	581	Found 'DU'-anomaly for variable 'copy_value' (lines '581'-'692').
167	src/att/grappa/Attribute.java	676	Avoid if (x != y) ..; else ..;
168	src/att/grappa/Attribute.java	679	Avoid throwing raw exception types.
169	src/att/grappa/Attribute.java	687	Avoid throwing raw exception types.
170	src/att/grappa/Attribute.java	709	Found 'DD'-anomaly for variable 'attrType' (lines '709'-'713').
171	src/att/grappa/Attribute.java	709	Found 'DD'-anomaly for variable 'attrType' (lines '709'-'716').
172	src/att/grappa/Attribute.java	709	Found 'DD'-anomaly for variable 'attrType' (lines '709'-'719').
173	src/att/grappa/Attribute.java	709	Found 'DD'-anomaly for variable 'attrType' (lines '709'-'722').
174	src/att/grappa/Attribute.java	709	Found 'DU'-anomaly for variable 'attrType' (lines '709'-'729').
175	src/att/grappa/Attribute.java	728	This statement may have some unnecessary parentheses
176	src/att/grappa/AttributeHandler.java	35	Avoid modifiers which are implied by the context
177	src/att/grappa/AttributeHandler.java	51	Avoid modifiers which are implied by the context
178	src/att/grappa/AttributeHandler.java	66	Avoid modifiers which are implied by the context
179	src/att/grappa/CustomRenderer.java	39	Avoid modifiers which are implied by the context
180	src/att/grappa/CustomRenderer.java	53	Avoid modifiers which are implied by the context
181	src/att/grappa/CustomRenderer.java	73	Avoid modifiers which are implied by the context
182	src/att/grappa/Edge.java	23	The class 'Edge' has a Cyclomatic Complexity of 4 (Highest = 25).
183	src/att/grappa/Edge.java	24	This class has too many methods, consider refactoring it.
184	src/att/grappa/Edge.java	30	Variables that are final and static should be in all caps.
185	src/att/grappa/Edge.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
186	src/att/grappa/Edge.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
187	src/att/grappa/Edge.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
188	src/att/grappa/Edge.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
189	src/att/grappa/Edge.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
190	src/att/grappa/Edge.java	44	Use explicit scoping instead of the default package private level
191	src/att/grappa/Edge.java	53	Parameter 'head' is not assigned and could be declared final
192	src/att/grappa/Edge.java	53	Parameter 'subg' is not assigned and could be declared final
193	src/att/grappa/Edge.java	53	Parameter 'tail' is not assigned and could be declared final
194	src/att/grappa/Edge.java	66	Parameter 'head' is not assigned and could be declared final
195	src/att/grappa/Edge.java	66	Parameter 'headPort' is not assigned and could be declared final
196	src/att/grappa/Edge.java	108	Avoid reassigning parameters such as 'head'
197	src/att/grappa/Edge.java	108	Avoid reassigning parameters such as 'headPort'
198	src/att/grappa/Edge.java	108	Avoid reassigning parameters such as 'key'
199	src/att/grappa/Edge.java	108	Avoid reassigning parameters such as 'tail'
200	src/att/grappa/Edge.java	108	Avoid reassigning parameters such as 'tailPort'
201	src/att/grappa/Edge.java	108	The constructor 'Edge' has a Cyclomatic Complexity of 25.
202	src/att/grappa/Edge.java	110	Local variable 'directed' could be declared final
203	src/att/grappa/Edge.java	113	Avoid using if...else statements without curly braces
204	src/att/grappa/Edge.java	115	Avoid using if...else statements without curly braces
205	src/att/grappa/Edge.java	118	Use equals() to compare object references.
206	src/att/grappa/Edge.java	119	Avoid throwing raw exception types.
207	src/att/grappa/Edge.java	121	Local variable 'enm' could be declared final
208	src/att/grappa/Edge.java	123	Avoid if (x != y) ..; else ..;
209	src/att/grappa/Edge.java	124	Avoid throwing raw exception types.
210	src/att/grappa/Edge.java	130	Avoid throwing raw exception types.
211	src/att/grappa/Edge.java	138	Local variable 'tmpNode' could be declared final
212	src/att/grappa/Edge.java	141	Local variable 'tmpPort' could be declared final
213	src/att/grappa/Edge.java	147	Avoid instantiating String objects; this is usually unnecessary.
214	src/att/grappa/Edge.java	151	Avoid instantiating String objects; this is usually unnecessary.
215	src/att/grappa/Edge.java	153	Avoid if (x != y) ..; else ..;
216	src/att/grappa/Edge.java	155	Avoid throwing raw exception types.
217	src/att/grappa/Edge.java	163	Overridable method 'setName' called during object construction
218	src/att/grappa/Edge.java	166	Avoid if (x != y) ..; else ..;
219	src/att/grappa/Edge.java	168	Avoid if (x != y) ..; else ..;
220	src/att/grappa/Edge.java	170	Avoid if (x != y) ..; else ..;
221	src/att/grappa/Edge.java	179	These nested if statements could be combined
222	src/att/grappa/Edge.java	181	Avoid throwing raw exception types.
223	src/att/grappa/Edge.java	213	A method should have only one exit point, and that should be the last statement in the method
224	src/att/grappa/Edge.java	213	This statement may have some unnecessary parentheses
225	src/att/grappa/Edge.java	225	This statement may have some unnecessary parentheses
226	src/att/grappa/Edge.java	236	This statement may have some unnecessary parentheses
227	src/att/grappa/Edge.java	250	Use explicit scoping instead of the default package private level
228	src/att/grappa/Edge.java	251	Local variable 'oldName' could be declared final
229	src/att/grappa/Edge.java	266	Assigning an Object to null is a code smell. Consider refactoring.
230	src/att/grappa/Edge.java	321	Found 'DD'-anomaly for variable 'tail' (lines '321'-'325').
231	src/att/grappa/Edge.java	321	Found 'DD'-anomaly for variable 'tail' (lines '321'-'327').
232	src/att/grappa/Edge.java	322	Found 'DD'-anomaly for variable 'head' (lines '322'-'330').
233	src/att/grappa/Edge.java	322	Found 'DD'-anomaly for variable 'head' (lines '322'-'332').
234	src/att/grappa/Edge.java	341	This statement may have some unnecessary parentheses
235	src/att/grappa/Edge.java	380	The method 'attributeType' has a Cyclomatic Complexity of 18.
236	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'388').
237	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'390').
238	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'392').
239	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'394').
240	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'396').
241	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'398').
242	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'400').
243	src/att/grappa/Edge.java	381	Found 'DD'-anomaly for variable 'convtype' (lines '381'-'402').
244	src/att/grappa/Edge.java	381	Found 'DU'-anomaly for variable 'convtype' (lines '381'-'409').
245	src/att/grappa/Edge.java	404	A method should have only one exit point, and that should be the last statement in the method
246	src/att/grappa/Edge.java	404	This statement may have some unnecessary parentheses
247	src/att/grappa/Edge.java	423	A method should have only one exit point, and that should be the last statement in the method
248	src/att/grappa/Edge.java	428	Consider replacing this Enumeration with the newer java.util.Iterator
249	src/att/grappa/Edge.java	429	Use explicit scoping instead of the default package private level
250	src/att/grappa/Edge.java	430	Use explicit scoping instead of the default package private level
251	src/att/grappa/Edge.java	431	Use explicit scoping instead of the default package private level
252	src/att/grappa/Edge.java	446	Found 'DD'-anomaly for variable 'tmpEdge' (lines '446'-'449').
253	src/att/grappa/Edge.java	446	Found 'DD'-anomaly for variable 'tmpEdge' (lines '446'-'458').
254	src/att/grappa/Edge.java	446	Found 'DU'-anomaly for variable 'tmpEdge' (lines '446'-'466').
255	src/att/grappa/Edge.java	451	A method should have only one exit point, and that should be the last statement in the method
256	src/att/grappa/Edge.java	454	Assigning an Object to null is a code smell. Consider refactoring.
257	src/att/grappa/Edge.java	460	A method should have only one exit point, and that should be the last statement in the method
258	src/att/grappa/Edge.java	463	Assigning an Object to null is a code smell. Consider refactoring.
259	src/att/grappa/Element.java	11	This class has a bunch of public methods and attributes
260	src/att/grappa/Element.java	29	Abstract classes should be named AbstractXXX
261	src/att/grappa/Element.java	29	Avoid really long classes.
262	src/att/grappa/Element.java	29	The class 'Element' has a Cyclomatic Complexity of 5 (Highest = 36).
263	src/att/grappa/Element.java	29	Too many fields
264	src/att/grappa/Element.java	31	This class has too many methods, consider refactoring it.
265	src/att/grappa/Element.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
266	src/att/grappa/Element.java	37	Use explicit scoping instead of the default package private level
267	src/att/grappa/Element.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
268	src/att/grappa/Element.java	44	It is somewhat confusing to have a field name with the same name as a method
269	src/att/grappa/Element.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
270	src/att/grappa/Element.java	52	Avoid excessively long variable names like userAttributeTypeMap
271	src/att/grappa/Element.java	52	Consider replacing this Hashtable with the newer java.util.Map
272	src/att/grappa/Element.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
273	src/att/grappa/Element.java	105	Use explicit scoping instead of the default package private level
274	src/att/grappa/Element.java	108	Consider replacing this Hashtable with the newer java.util.Map
275	src/att/grappa/Element.java	108	Found non-transient, non-static member. Please mark as transient or provide accessors.
276	src/att/grappa/Element.java	108	Use explicit scoping instead of the default package private level
277	src/att/grappa/Element.java	111	Consider replacing this Hashtable with the newer java.util.Map
278	src/att/grappa/Element.java	111	Use explicit scoping instead of the default package private level
279	src/att/grappa/Element.java	114	Use explicit scoping instead of the default package private level
280	src/att/grappa/Element.java	124	Avoid excessively long variable names like printAllAttributes
281	src/att/grappa/Element.java	133	Avoid excessively long variable names like printDefaultAttributes
282	src/att/grappa/Element.java	161	Parameter 'subg' is not assigned and could be declared final
283	src/att/grappa/Element.java	161	Parameter 'type' is not assigned and could be declared final
284	src/att/grappa/Element.java	163	Overridable method 'setSubgraph' called during object construction
285	src/att/grappa/Element.java	164	Overridable method 'setGraph' called during object construction
286	src/att/grappa/Element.java	165	Overridable method 'setIdKey' called during object construction
287	src/att/grappa/Element.java	168	Overridable method 'attrOfInterest' called during object construction
288	src/att/grappa/Element.java	200	This statement may have some unnecessary parentheses
289	src/att/grappa/Element.java	211	This statement may have some unnecessary parentheses
290	src/att/grappa/Element.java	222	This statement may have some unnecessary parentheses
291	src/att/grappa/Element.java	240	This statement may have some unnecessary parentheses
292	src/att/grappa/Element.java	265	Parameter 'delete' is not assigned and could be declared final
293	src/att/grappa/Element.java	270	Parameter 'isDelete' is not assigned and could be declared final
294	src/att/grappa/Element.java	270	Parameter 'state' is not assigned and could be declared final
295	src/att/grappa/Element.java	270	Use block level rather than method level synchronization
296	src/att/grappa/Element.java	275	A method should have only one exit point, and that should be the last statement in the method
297	src/att/grappa/Element.java	275	This statement may have some unnecessary parentheses
298	src/att/grappa/Element.java	277	A method should have only one exit point, and that should be the last statement in the method
299	src/att/grappa/Element.java	281	A method should have only one exit point, and that should be the last statement in the method
300	src/att/grappa/Element.java	284	A method should have only one exit point, and that should be the last statement in the method
301	src/att/grappa/Element.java	284	Avoid using if statements without curly braces
302	src/att/grappa/Element.java	285	A method should have only one exit point, and that should be the last statement in the method
303	src/att/grappa/Element.java	287	Avoid if (x != y) ..; else ..;
304	src/att/grappa/Element.java	303	Avoid using if statements without curly braces
305	src/att/grappa/Element.java	309	Local variable 'attr' could be declared final
306	src/att/grappa/Element.java	322	Avoid using if statements without curly braces
307	src/att/grappa/Element.java	324	Local variable 'attr' could be declared final
308	src/att/grappa/Element.java	325	Avoid using if statements without curly braces
309	src/att/grappa/Element.java	336	Avoid using if statements without curly braces
310	src/att/grappa/Element.java	378	The method 'setAttribute' has a Cyclomatic Complexity of 15.
311	src/att/grappa/Element.java	386	Found 'DD'-anomaly for variable 'oldValue' (lines '386'-'399').
312	src/att/grappa/Element.java	386	Found 'DU'-anomaly for variable 'oldValue' (lines '386'-'416').
313	src/att/grappa/Element.java	413	Avoid instantiating Long objects.Call Long.valueOf() instead
314	src/att/grappa/Element.java	428	Local variable 'dfltAttr' could be declared final
315	src/att/grappa/Element.java	429	Found 'DD'-anomaly for variable 'attr' (lines '429'-'430').
316	src/att/grappa/Element.java	436	Avoid instantiating Long objects.Call Long.valueOf() instead
317	src/att/grappa/Element.java	470	Found 'DD'-anomaly for variable 'oldValue' (lines '470'-'474').
318	src/att/grappa/Element.java	470	Found 'DD'-anomaly for variable 'oldValue' (lines '470'-'477').
319	src/att/grappa/Element.java	470	Found 'DD'-anomaly for variable 'oldValue' (lines '470'-'482').
320	src/att/grappa/Element.java	471	Found 'DU'-anomaly for variable 'subg' (lines '471'-'487').
321	src/att/grappa/Element.java	471	Local variable 'subg' could be declared final
322	src/att/grappa/Element.java	472	Switch statements should have a default label
323	src/att/grappa/Element.java	518	Found 'DD'-anomaly for variable 'oldValue' (lines '518'-'522').
324	src/att/grappa/Element.java	518	Found 'DD'-anomaly for variable 'oldValue' (lines '518'-'525').
325	src/att/grappa/Element.java	518	Found 'DD'-anomaly for variable 'oldValue' (lines '518'-'530').
326	src/att/grappa/Element.java	519	Found 'DU'-anomaly for variable 'subg' (lines '519'-'535').
327	src/att/grappa/Element.java	519	Local variable 'subg' could be declared final
328	src/att/grappa/Element.java	520	Switch statements should have a default label
329	src/att/grappa/Element.java	568	Consider replacing this Hashtable with the newer java.util.Map
330	src/att/grappa/Element.java	568	Found 'DD'-anomaly for variable 'pairs' (lines '568'-'572').
331	src/att/grappa/Element.java	569	Found 'DD'-anomaly for variable 'attr' (lines '569'-'574').
332	src/att/grappa/Element.java	569	Found 'DD'-anomaly for variable 'attr' (lines '569'-'592').
333	src/att/grappa/Element.java	569	Found 'DU'-anomaly for variable 'attr' (lines '569'-'601').
334	src/att/grappa/Element.java	578	Switch statements should have a default label
335	src/att/grappa/Element.java	629	Avoid variables with short names like sg
336	src/att/grappa/Element.java	631	Avoid assignments in operands
337	src/att/grappa/Element.java	631	Found 'DU'-anomaly for variable 'attr' (lines '631'-'635').
338	src/att/grappa/Element.java	632	Avoid assignments in operands
339	src/att/grappa/Element.java	632	Found 'DU'-anomaly for variable 'sg' (lines '632'-'635').
340	src/att/grappa/Element.java	662	Found 'DD'-anomaly for variable 'value' (lines '662'-'675').
341	src/att/grappa/Element.java	662	Found 'DD'-anomaly for variable 'value' (lines '662'-'678').
342	src/att/grappa/Element.java	662	Found 'DD'-anomaly for variable 'value' (lines '662'-'681').
343	src/att/grappa/Element.java	662	Found 'DU'-anomaly for variable 'value' (lines '662'-'685').
344	src/att/grappa/Element.java	663	Avoid variables with short names like sg
345	src/att/grappa/Element.java	663	Found 'DD'-anomaly for variable 'sg' (lines '663'-'665').
346	src/att/grappa/Element.java	663	Found 'DD'-anomaly for variable 'sg' (lines '663'-'666').
347	src/att/grappa/Element.java	665	Avoid using if...else statements without curly braces
348	src/att/grappa/Element.java	666	Avoid using if...else statements without curly braces
349	src/att/grappa/Element.java	673	Switch statements should have a default label
350	src/att/grappa/Element.java	705	Found 'DD'-anomaly for variable 'attr' (lines '705'-'707').
351	src/att/grappa/Element.java	707	Avoid assignments in operands
352	src/att/grappa/Element.java	707	Found 'DD'-anomaly for variable 'attr' (lines '707'-'708').
353	src/att/grappa/Element.java	721	Found 'DD'-anomaly for variable 'value' (lines '721'-'725').
354	src/att/grappa/Element.java	773	The method 'setSubgraph' has a Cyclomatic Complexity of 11.
355	src/att/grappa/Element.java	775	Switch statements should have a default label
356	src/att/grappa/Element.java	800	Assigning an Object to null is a code smell. Consider refactoring.
357	src/att/grappa/Element.java	804	Assigning an Object to null is a code smell. Consider refactoring.
358	src/att/grappa/Element.java	841	Found 'DU'-anomaly for variable 'indent' (lines '841'-'851').
359	src/att/grappa/Element.java	863	The method 'printAttributes' has a Cyclomatic Complexity of 20.
360	src/att/grappa/Element.java	863	The method printAttributes() has an NPath complexity of 2400
361	src/att/grappa/Element.java	864	Found 'DU'-anomaly for variable 'indent' (lines '864'-'911').
362	src/att/grappa/Element.java	865	Found 'DU'-anomaly for variable 'prefix' (lines '865'-'911').
363	src/att/grappa/Element.java	866	Found 'DU'-anomaly for variable 'suffix' (lines '866'-'911').
364	src/att/grappa/Element.java	871	Consider replacing this Hashtable with the newer java.util.Map
365	src/att/grappa/Element.java	871	Found 'DD'-anomaly for variable 'printlist' (lines '871'-'874').
366	src/att/grappa/Element.java	871	Found 'DU'-anomaly for variable 'printlist' (lines '871'-'911').
367	src/att/grappa/Element.java	874	Found 'DU'-anomaly for variable 'printlist' (lines '874'-'911').
368	src/att/grappa/Element.java	877	Found 'DD'-anomaly for variable 'attrs' (lines '877'-'879').
369	src/att/grappa/Element.java	877	Found 'DD'-anomaly for variable 'attrs' (lines '877'-'881').
370	src/att/grappa/Element.java	933	The method 'canonString' has a Cyclomatic Complexity of 19.
371	src/att/grappa/Element.java	933	The method canonString() has an NPath complexity of 1215
372	src/att/grappa/Element.java	936	Avoid assignments in operands
373	src/att/grappa/Element.java	936	Found 'DU'-anomaly for variable 'len' (lines '936'-'978').
374	src/att/grappa/Element.java	942	Avoid unused local variables such as 'ch'.
375	src/att/grappa/Element.java	942	Avoid variables with short names like ch
376	src/att/grappa/Element.java	943	Found 'DD'-anomaly for variable 'has_special' (lines '943'-'950').
377	src/att/grappa/Element.java	944	Found 'DD'-anomaly for variable 'isHTML' (lines '944'-'961').
378	src/att/grappa/Element.java	950	Found 'DD'-anomaly for variable 'has_special' (lines '950'-'950').
379	src/att/grappa/Element.java	952	These nested if statements could be combined
380	src/att/grappa/Element.java	953	Found 'DD'-anomaly for variable 'has_special' (lines '953'-'950').
381	src/att/grappa/Element.java	960	Avoid assignments in operands
382	src/att/grappa/Element.java	965	When doing a String.toLowerCase()/toUpperCase() call, use a Locale
383	src/att/grappa/Element.java	967	Position literals first in String comparisons
384	src/att/grappa/Element.java	967	Position literals first in String comparisons
385	src/att/grappa/Element.java	967	Position literals first in String comparisons
386	src/att/grappa/Element.java	968	Position literals first in String comparisons
387	src/att/grappa/Element.java	968	Position literals first in String comparisons
388	src/att/grappa/Element.java	990	Found 'DD'-anomaly for variable 'type' (lines '990'-'1,000').
389	src/att/grappa/Element.java	990	Found 'DD'-anomaly for variable 'type' (lines '990'-'1,003').
390	src/att/grappa/Element.java	990	Found 'DD'-anomaly for variable 'type' (lines '990'-'1,006').
391	src/att/grappa/Element.java	990	Found 'DD'-anomaly for variable 'type' (lines '990'-'994').
392	src/att/grappa/Element.java	990	Found 'DD'-anomaly for variable 'type' (lines '990'-'997').
393	src/att/grappa/Element.java	1006	Assigning an Object to null is a code smell. Consider refactoring.
394	src/att/grappa/Element.java	1024	Found 'DD'-anomaly for variable 'allDigits' (lines '1,024'-'1,028').
395	src/att/grappa/Element.java	1024	Found 'DD'-anomaly for variable 'allDigits' (lines '1,024'-'1,031').
396	src/att/grappa/Element.java	1028	Found 'DD'-anomaly for variable 'allDigits' (lines '1,028'-'1,028').
397	src/att/grappa/Element.java	1028	Found 'DD'-anomaly for variable 'allDigits' (lines '1,028'-'1,031').
398	src/att/grappa/Element.java	1031	Found 'DD'-anomaly for variable 'allDigits' (lines '1,031'-'1,028').
399	src/att/grappa/Element.java	1031	Found 'DD'-anomaly for variable 'allDigits' (lines '1,031'-'1,031').
400	src/att/grappa/Element.java	1052	The method delete() has an NPath complexity of 2016
401	src/att/grappa/Element.java	1054	Found 'DU'-anomaly for variable 'name' (lines '1,054'-'1,118').
402	src/att/grappa/Element.java	1055	Found 'DD'-anomaly for variable 'enm' (lines '1,055'-'1,057').
403	src/att/grappa/Element.java	1062	Found 'DD'-anomaly for variable 'elem' (lines '1,062'-'1,075').
404	src/att/grappa/Element.java	1062	Found 'DD'-anomaly for variable 'elem' (lines '1,062'-'1,092').
405	src/att/grappa/Element.java	1062	Found 'DU'-anomaly for variable 'elem' (lines '1,062'-'1,118').
406	src/att/grappa/Element.java	1063	Found 'DD'-anomaly for variable 'prnt' (lines '1,063'-'1,066').
407	src/att/grappa/Element.java	1065	Assigning an Object to null is a code smell. Consider refactoring.
408	src/att/grappa/Element.java	1068	Assigning an Object to null is a code smell. Consider refactoring.
409	src/att/grappa/Element.java	1071	A high ratio of statements to labels in a switch statement. Consider refactoring.
410	src/att/grappa/Element.java	1092	Found 'DD'-anomaly for variable 'elem' (lines '1,092'-'1,094').
411	src/att/grappa/Element.java	1092	Found 'DD'-anomaly for variable 'elem' (lines '1,092'-'1,098').
412	src/att/grappa/Element.java	1098	Found 'DD'-anomaly for variable 'elem' (lines '1,098'-'1,100').
413	src/att/grappa/Element.java	1098	Found 'DD'-anomaly for variable 'elem' (lines '1,098'-'1,104').
414	src/att/grappa/Element.java	1104	Found 'DD'-anomaly for variable 'elem' (lines '1,104'-'1,106').
415	src/att/grappa/Element.java	1104	Found 'DU'-anomaly for variable 'elem' (lines '1,104'-'1,118').
416	src/att/grappa/Element.java	1130	Avoid throwing raw exception types.
417	src/att/grappa/Element.java	1133	Found 'DD'-anomaly for variable 'attr' (lines '1,133'-'1,134').
418	src/att/grappa/Element.java	1161	Avoid throwing raw exception types.
419	src/att/grappa/Element.java	1164	Found 'DU'-anomaly for variable 'attr' (lines '1,164'-'1,170').
420	src/att/grappa/Element.java	1181	Found 'DU'-anomaly for variable 'attr' (lines '1,181'-'1,185').
421	src/att/grappa/Element.java	1197	Found 'DU'-anomaly for variable 'attr' (lines '1,197'-'1,201').
422	src/att/grappa/Element.java	1212	Found 'DU'-anomaly for variable 'attr' (lines '1,212'-'1,218').
423	src/att/grappa/Element.java	1228	Found 'DU'-anomaly for variable 'attr' (lines '1,228'-'1,232').
424	src/att/grappa/Element.java	1243	Found 'DU'-anomaly for variable 'attr' (lines '1,243'-'1,247').
425	src/att/grappa/Element.java	1255	Found 'DU'-anomaly for variable 'attr' (lines '1,255'-'1,259').
426	src/att/grappa/Element.java	1269	Found 'DU'-anomaly for variable 'attr' (lines '1,269'-'1,273').
427	src/att/grappa/Element.java	1287	The method setUserAttributeType() has an NPath complexity of 336
428	src/att/grappa/Element.java	1288	Found 'DD'-anomaly for variable 'oldtype' (lines '1,288'-'1,328').
429	src/att/grappa/Element.java	1288	Found 'DU'-anomaly for variable 'oldtype' (lines '1,288'-'1,333').
430	src/att/grappa/Element.java	1289	Found 'DD'-anomaly for variable 'type' (lines '1,289'-'1,296').
431	src/att/grappa/Element.java	1289	Found 'DD'-anomaly for variable 'type' (lines '1,289'-'1,314').
432	src/att/grappa/Element.java	1289	Found 'DU'-anomaly for variable 'type' (lines '1,289'-'1,333').
433	src/att/grappa/Element.java	1291	String.trim().length()==0 is an inefficient way to validate an empty String.
434	src/att/grappa/Element.java	1296	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
435	src/att/grappa/Element.java	1298	The default label should be the last label in a switch statement
436	src/att/grappa/Element.java	1314	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
437	src/att/grappa/Element.java	1323	Singleton is not thread safe
438	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,349').
439	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,351').
440	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,353').
441	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,355').
442	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,357').
443	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,359').
444	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,361').
445	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,363').
446	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,365').
447	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,367').
448	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,369').
449	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,371').
450	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,373').
451	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,376').
452	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,380').
453	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,382').
454	src/att/grappa/Element.java	1342	Found 'DD'-anomaly for variable 'convtype' (lines '1,342'-'1,385').
455	src/att/grappa/Element.java	1374	Avoid empty if statements
456	src/att/grappa/Element.java	1377	Avoid if (x != y) ..; else ..;
457	src/att/grappa/Element.java	1401	Found 'DD'-anomaly for variable 'attr' (lines '1,401'-'1,404').
458	src/att/grappa/Element.java	1401	Found 'DU'-anomaly for variable 'attr' (lines '1,401'-'1,413').
459	src/att/grappa/Element.java	1432	Avoid using implementation types like 'Vector'; use the interface instead
460	src/att/grappa/Element.java	1432	Avoid using implementation types like 'Vector'; use the interface instead
461	src/att/grappa/Element.java	1432	Consider replacing this Vector with the newer java.util.List
462	src/att/grappa/Element.java	1434	Consider replacing this Vector with the newer java.util.List
463	src/att/grappa/Element.java	1435	Avoid unused local variables such as 'elem'.
464	src/att/grappa/Element.java	1436	Avoid unused local variables such as 'size'.
465	src/att/grappa/Element.java	1438	Use ArrayList instead of Vector
466	src/att/grappa/Element.java	1441	Use ArrayList instead of Vector
467	src/att/grappa/Element.java	1450	Avoid really long methods.
468	src/att/grappa/Element.java	1450	Avoid reassigning parameters such as 'level'
469	src/att/grappa/Element.java	1450	Avoid using implementation types like 'Vector'; use the interface instead
470	src/att/grappa/Element.java	1450	Avoid using implementation types like 'Vector'; use the interface instead
471	src/att/grappa/Element.java	1450	Avoid using implementation types like 'Vector'; use the interface instead
472	src/att/grappa/Element.java	1450	Avoid using implementation types like 'Vector'; use the interface instead
473	src/att/grappa/Element.java	1450	Consider replacing this Vector with the newer java.util.List
474	src/att/grappa/Element.java	1450	Consider replacing this Vector with the newer java.util.List
475	src/att/grappa/Element.java	1450	The method doBDFS() has an NPath complexity of 3780
476	src/att/grappa/Element.java	1455	Avoid unused local variables such as 'node'.
477	src/att/grappa/Element.java	1456	Avoid unused local variables such as 'szz'.
478	src/att/grappa/Element.java	1456	Avoid variables with short names like sz
479	src/att/grappa/Element.java	1458	Consider replacing this Vector with the newer java.util.List
480	src/att/grappa/Element.java	1460	Found 'DU'-anomaly for variable 'sz' (lines '1,460'-'1,574').
481	src/att/grappa/Element.java	1470	Use ArrayList instead of Vector
482	src/att/grappa/Element.java	1474	Found 'DU'-anomaly for variable 'elem' (lines '1,474'-'1,574').
483	src/att/grappa/Element.java	1501	These nested if statements could be combined
484	src/att/grappa/Element.java	1511	These nested if statements could be combined
485	src/att/grappa/Element.java	1529	These nested if statements could be combined
486	src/att/grappa/Element.java	1539	These nested if statements could be combined
487	src/att/grappa/Element.java	1572	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
488	src/att/grappa/Element.java	1596	Avoid variables with short names like p
489	src/att/grappa/Element.java	1598	Avoid using if...else statements without curly braces
490	src/att/grappa/Element.java	1600	Avoid using if...else statements without curly braces
491	src/att/grappa/Element.java	1602	Avoid using if...else statements without curly braces
492	src/att/grappa/ExceptionDisplay.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
493	src/att/grappa/ExceptionDisplay.java	39	Private field 'title' could be made final; it is only initialized in the declaration or constructor.
494	src/att/grappa/ExceptionDisplay.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
495	src/att/grappa/ExceptionDisplay.java	40	Use explicit scoping instead of the default package private level
496	src/att/grappa/ExceptionDisplay.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
497	src/att/grappa/ExceptionDisplay.java	41	Use explicit scoping instead of the default package private level
498	src/att/grappa/ExceptionDisplay.java	49	Parameter 'title' is not assigned and could be declared final
499	src/att/grappa/ExceptionDisplay.java	60	Avoid variables with short names like ex
500	src/att/grappa/ExceptionDisplay.java	60	Parameter 'ex' is not assigned and could be declared final
501	src/att/grappa/ExceptionDisplay.java	72	Avoid variables with short names like ex
502	src/att/grappa/ExceptionDisplay.java	72	Parameter 'ex' is not assigned and could be declared final
503	src/att/grappa/ExceptionDisplay.java	72	Parameter 'msg' is not assigned and could be declared final
504	src/att/grappa/ExceptionDisplay.java	73	Avoid using if statements without curly braces
505	src/att/grappa/ExceptionDisplay.java	78	Avoid if (x != y) ..; else ..;
506	src/att/grappa/ExceptionDisplay.java	92	Found non-transient, non-static member. Please mark as transient or provide accessors.
507	src/att/grappa/ExceptionDisplay.java	92	Private field 'textarea' could be made final; it is only initialized in the declaration or constructor.
508	src/att/grappa/ExceptionDisplay.java	93	Found non-transient, non-static member. Please mark as transient or provide accessors.
509	src/att/grappa/ExceptionDisplay.java	93	Private field 'buttonPanel' could be made final; it is only initialized in the declaration or constructor.
510	src/att/grappa/ExceptionDisplay.java	94	Private field 'trace' could be made final; it is only initialized in the declaration or constructor.
511	src/att/grappa/ExceptionDisplay.java	95	Private field 'dismiss' could be made final; it is only initialized in the declaration or constructor.
512	src/att/grappa/ExceptionDisplay.java	98	Parameter 'title' is not assigned and could be declared final
513	src/att/grappa/ExceptionDisplay.java	103	Local variable 'gbl' could be declared final
514	src/att/grappa/ExceptionDisplay.java	104	Local variable 'gbc' could be declared final
515	src/att/grappa/ExceptionDisplay.java	137	Avoid reassigning parameters such as 'text'
516	src/att/grappa/ExceptionDisplay.java	137	Use explicit scoping instead of the default package private level
517	src/att/grappa/ExceptionDisplay.java	138	Avoid using if statements without curly braces
518	src/att/grappa/ExceptionDisplay.java	142	Use explicit scoping instead of the default package private level
519	src/att/grappa/ExceptionDisplay.java	155	Assigning an Object to null is a code smell. Consider refactoring.
520	src/att/grappa/ExceptionDisplay.java	159	Local variable 'src' could be declared final
521	src/att/grappa/ExceptionDisplay.java	161	Local variable 'btn' could be declared final
522	src/att/grappa/ExceptionDisplay.java	168	Local variable 'swriter' could be declared final
523	src/att/grappa/Graph.java	32	The class 'Graph' has a Cyclomatic Complexity of 2 (Highest = 10).
524	src/att/grappa/Graph.java	32	Too many fields
525	src/att/grappa/Graph.java	33	This class has too many methods, consider refactoring it.
526	src/att/grappa/Graph.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
527	src/att/grappa/Graph.java	50	StringBuffers can grow quite a lot, and so may become a source of memory leak (if the owning class has a long life time).
528	src/att/grappa/Graph.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
529	src/att/grappa/Graph.java	56	Found non-transient, non-static member. Please mark as transient or provide accessors.
530	src/att/grappa/Graph.java	58	Found non-transient, non-static member. Please mark as transient or provide accessors.
531	src/att/grappa/Graph.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
532	src/att/grappa/Graph.java	92	Consider replacing this Hashtable with the newer java.util.Map
533	src/att/grappa/Graph.java	92	Use explicit scoping instead of the default package private level
534	src/att/grappa/Graph.java	95	Consider replacing this Hashtable with the newer java.util.Map
535	src/att/grappa/Graph.java	99	Avoid excessively long variable names like sysdfltNodeAttributes
536	src/att/grappa/Graph.java	99	Consider replacing this Hashtable with the newer java.util.Map
537	src/att/grappa/Graph.java	100	Avoid excessively long variable names like sysdfltEdgeAttributes
538	src/att/grappa/Graph.java	100	Consider replacing this Hashtable with the newer java.util.Map
539	src/att/grappa/Graph.java	101	Avoid excessively long variable names like sysdfltGraphAttributes
540	src/att/grappa/Graph.java	101	Consider replacing this Hashtable with the newer java.util.Map
541	src/att/grappa/Graph.java	108	The String literal "black" appears 5 times in this file; the first occurrence is on line 108
542	src/att/grappa/Graph.java	148	Parameter 'name' is not assigned and could be declared final
543	src/att/grappa/Graph.java	148	Parameter 'table' is not assigned and could be declared final
544	src/att/grappa/Graph.java	148	Parameter 'type' is not assigned and could be declared final
545	src/att/grappa/Graph.java	148	Parameter 'value' is not assigned and could be declared final
546	src/att/grappa/Graph.java	149	Local variable 'attr' could be declared final
547	src/att/grappa/Graph.java	166	It is a good practice to call super() in a constructor
548	src/att/grappa/Graph.java	166	Parameter 'directed' is not assigned and could be declared final
549	src/att/grappa/Graph.java	168	Overridable method 'addIdMapping' called during object construction
550	src/att/grappa/Graph.java	174	Overridable method 'setGrappaAttribute' called during object construction
551	src/att/grappa/Graph.java	175	Overridable method 'setGrappaAttribute' called during object construction
552	src/att/grappa/Graph.java	176	Overridable method 'setGrappaAttribute' called during object construction
553	src/att/grappa/Graph.java	177	Overridable method 'setGrappaAttribute' called during object construction
554	src/att/grappa/Graph.java	207	Avoid unused local variables such as 'attr'.
555	src/att/grappa/Graph.java	207	Found 'DU'-anomaly for variable 'attr' (lines '207'-'222').
556	src/att/grappa/Graph.java	207	Local variable 'attr' could be declared final
557	src/att/grappa/Graph.java	243	Local variable 'oldSync' could be declared final
558	src/att/grappa/Graph.java	245	This statement may have some unnecessary parentheses
559	src/att/grappa/Graph.java	254	A getX() method which returns a boolean should be named isX()
560	src/att/grappa/Graph.java	255	This statement may have some unnecessary parentheses
561	src/att/grappa/Graph.java	273	Use explicit scoping instead of the default package private level
562	src/att/grappa/Graph.java	277	Use block level rather than method level synchronization
563	src/att/grappa/Graph.java	282	A method should have only one exit point, and that should be the last statement in the method
564	src/att/grappa/Graph.java	282	This statement may have some unnecessary parentheses
565	src/att/grappa/Graph.java	284	A method should have only one exit point, and that should be the last statement in the method
566	src/att/grappa/Graph.java	288	A method should have only one exit point, and that should be the last statement in the method
567	src/att/grappa/Graph.java	288	This statement may have some unnecessary parentheses
568	src/att/grappa/Graph.java	291	A method should have only one exit point, and that should be the last statement in the method
569	src/att/grappa/Graph.java	291	Avoid using if statements without curly braces
570	src/att/grappa/Graph.java	291	This statement may have some unnecessary parentheses
571	src/att/grappa/Graph.java	292	A method should have only one exit point, and that should be the last statement in the method
572	src/att/grappa/Graph.java	294	Avoid if (x != y) ..; else ..;
573	src/att/grappa/Graph.java	298	Avoid using if statements without curly braces
574	src/att/grappa/Graph.java	315	Avoid using if statements without curly braces
575	src/att/grappa/Graph.java	330	Avoid using if statements without curly braces
576	src/att/grappa/Graph.java	331	Local variable 'attr' could be declared final
577	src/att/grappa/Graph.java	332	Avoid using if statements without curly braces
578	src/att/grappa/Graph.java	372	The method 'attributeType' has a Cyclomatic Complexity of 10.
579	src/att/grappa/Graph.java	373	Found 'DD'-anomaly for variable 'convtype' (lines '373'-'380').
580	src/att/grappa/Graph.java	373	Found 'DD'-anomaly for variable 'convtype' (lines '373'-'382').
581	src/att/grappa/Graph.java	373	Found 'DD'-anomaly for variable 'convtype' (lines '373'-'384').
582	src/att/grappa/Graph.java	373	Found 'DD'-anomaly for variable 'convtype' (lines '373'-'386').
583	src/att/grappa/Graph.java	373	Found 'DD'-anomaly for variable 'convtype' (lines '373'-'388').
584	src/att/grappa/Graph.java	432	Switch statements should have a default label
585	src/att/grappa/Graph.java	440	The String literal "specified type must be NODE, EDGE or SUBGRAPH" appears 4 times in this file; the first occurrence is on line 440
586	src/att/grappa/Graph.java	454	Switch statements should have a default label
587	src/att/grappa/Graph.java	476	Switch statements should have a default label
588	src/att/grappa/Graph.java	498	Switch statements should have a default label
589	src/att/grappa/Graph.java	515	Use explicit scoping instead of the default package private level
590	src/att/grappa/Graph.java	536	Avoid variables with short names like id
591	src/att/grappa/Graph.java	536	Use explicit scoping instead of the default package private level
592	src/att/grappa/Graph.java	537	Found 'DD'-anomaly for variable 'value' (lines '537'-'542').
593	src/att/grappa/Graph.java	537	Found 'DU'-anomaly for variable 'value' (lines '537'-'544').
594	src/att/grappa/Graph.java	538	Local variable 'tval' could be declared final
595	src/att/grappa/Graph.java	543	Avoid instantiating Long objects.Call Long.valueOf() instead
596	src/att/grappa/Graph.java	555	Use explicit scoping instead of the default package private level
597	src/att/grappa/Graph.java	604	Found 'DD'-anomaly for variable 'out' (lines '604'-'607').
598	src/att/grappa/Graph.java	604	Found 'DD'-anomaly for variable 'out' (lines '604'-'609').
599	src/att/grappa/Graph.java	636	Switch statements should have a default label
600	src/att/grappa/Graph.java	756	Found 'DU'-anomaly for variable 'graphName' (lines '756'-'758').
601	src/att/grappa/Graph.java	880	Avoid variables with short names like ex
602	src/att/grappa/Graph.java	910	Found 'DD'-anomaly for variable 'elem' (lines '910'-'913').
603	src/att/grappa/Graph.java	910	Found 'DU'-anomaly for variable 'elem' (lines '910'-'917').
604	src/att/grappa/Graph.java	914	Avoid using if...else statements without curly braces
605	src/att/grappa/Graph.java	915	Avoid using if...else statements without curly braces
606	src/att/grappa/Graph.java	930	Avoid variables with short names like li
607	src/att/grappa/Graph.java	930	Found 'DD'-anomaly for variable 'li' (lines '930'-'934').
608	src/att/grappa/Graph.java	930	Found 'DU'-anomaly for variable 'li' (lines '930'-'943').
609	src/att/grappa/Graph.java	954	Avoid variables with short names like li
610	src/att/grappa/Graph.java	954	Found 'DD'-anomaly for variable 'li' (lines '954'-'960').
611	src/att/grappa/Graph.java	954	Found 'DU'-anomaly for variable 'li' (lines '954'-'970').
612	src/att/grappa/Graph.java	956	Found 'DD'-anomaly for variable 'panel' (lines '956'-'962').
613	src/att/grappa/Graph.java	956	Found 'DU'-anomaly for variable 'panel' (lines '956'-'970').
614	src/att/grappa/GraphEnumeration.java	26	Avoid modifiers which are implied by the context
615	src/att/grappa/GraphEnumeration.java	36	Avoid modifiers which are implied by the context
616	src/att/grappa/GraphEnumeration.java	46	Avoid modifiers which are implied by the context
617	src/att/grappa/GraphParserException.java	24	Document empty constructor
618	src/att/grappa/GraphParserException.java	24	It is a good practice to call super() in a constructor
619	src/att/grappa/GraphParserException.java	31	Parameter 'message' is not assigned and could be declared final
620	src/att/grappa/Grappa.java	51	Abstract classes should be named AbstractXXX
621	src/att/grappa/Grappa.java	51	Too many fields
622	src/att/grappa/Grappa.java	69	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
623	src/att/grappa/Grappa.java	70	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
624	src/att/grappa/Grappa.java	71	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
625	src/att/grappa/Grappa.java	72	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
626	src/att/grappa/Grappa.java	73	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
627	src/att/grappa/Grappa.java	98	Local variable 'enm' could be declared final
628	src/att/grappa/Grappa.java	121	Variables that are final and static should be in all caps.
629	src/att/grappa/Grappa.java	126	Avoid excessively long variable names like doDisplayException
630	src/att/grappa/Grappa.java	134	Avoid variables with short names like ex
631	src/att/grappa/Grappa.java	134	Parameter 'ex' is not assigned and could be declared final
632	src/att/grappa/Grappa.java	135	Avoid using if statements without curly braces
633	src/att/grappa/Grappa.java	145	Avoid variables with short names like ex
634	src/att/grappa/Grappa.java	145	Parameter 'ex' is not assigned and could be declared final
635	src/att/grappa/Grappa.java	145	Parameter 'msg' is not assigned and could be declared final
636	src/att/grappa/Grappa.java	146	Avoid using if statements without curly braces
637	src/att/grappa/Grappa.java	155	Avoid using implementation types like 'java.util.Vector'; use the interface instead
638	src/att/grappa/Grappa.java	155	Avoid using implementation types like 'java.util.Vector'; use the interface instead
639	src/att/grappa/Grappa.java	155	Use ArrayList instead of Vector
640	src/att/grappa/Grappa.java	155	Variables that are final and static should be in all caps.
641	src/att/grappa/Grappa.java	171	Parameter 'text' is not assigned and could be declared final
642	src/att/grappa/Grappa.java	172	Local variable 'oldTip' could be declared final
643	src/att/grappa/Grappa.java	174	This statement may have some unnecessary parentheses
644	src/att/grappa/Grappa.java	184	This statement may have some unnecessary parentheses
645	src/att/grappa/Grappa.java	199	Avoid excessively long variable names like elementPrintAllAttributes
646	src/att/grappa/Grappa.java	209	Avoid excessively long variable names like elementPrintDefaultAttributes
647	src/att/grappa/Grappa.java	247	Avoid excessively long variable names like autoPositionNodeLabel
648	src/att/grappa/Grappa.java	257	Avoid excessively long variable names like provideBBoxAttribute
649	src/att/grappa/GrappaAdapter.java	62	The class 'GrappaAdapter' has a Cyclomatic Complexity of 21 (Highest = 49).
650	src/att/grappa/GrappaAdapter.java	75	Avoid variables with short names like pt
651	src/att/grappa/GrappaAdapter.java	75	Parameter 'clickCount' is not assigned and could be declared final
652	src/att/grappa/GrappaAdapter.java	75	Parameter 'modifiers' is not assigned and could be declared final
653	src/att/grappa/GrappaAdapter.java	75	Parameter 'panel' is not assigned and could be declared final
654	src/att/grappa/GrappaAdapter.java	75	Parameter 'pt' is not assigned and could be declared final
655	src/att/grappa/GrappaAdapter.java	75	Parameter 'subg' is not assigned and could be declared final
656	src/att/grappa/GrappaAdapter.java	75	The method 'grappaClicked' has a Cyclomatic Complexity of 24.
657	src/att/grappa/GrappaAdapter.java	86	Deeply nested if..then statements are hard to read
658	src/att/grappa/GrappaAdapter.java	89	Consider replacing this Vector with the newer java.util.List
659	src/att/grappa/GrappaAdapter.java	89	Consider replacing this Vector with the newer java.util.List
660	src/att/grappa/GrappaAdapter.java	89	Local variable 'vec' could be declared final
661	src/att/grappa/GrappaAdapter.java	94	Assigning an Object to null is a code smell. Consider refactoring.
662	src/att/grappa/GrappaAdapter.java	99	Avoid using if statements without curly braces
663	src/att/grappa/GrappaAdapter.java	99	Deeply nested if..then statements are hard to read
664	src/att/grappa/GrappaAdapter.java	103	Consider replacing this Vector with the newer java.util.List
665	src/att/grappa/GrappaAdapter.java	103	Consider replacing this Vector with the newer java.util.List
666	src/att/grappa/GrappaAdapter.java	103	Local variable 'vec' could be declared final
667	src/att/grappa/GrappaAdapter.java	108	Assigning an Object to null is a code smell. Consider refactoring.
668	src/att/grappa/GrappaAdapter.java	116	These nested if statements could be combined
669	src/att/grappa/GrappaAdapter.java	128	Assigning an Object to null is a code smell. Consider refactoring.
670	src/att/grappa/GrappaAdapter.java	130	Consider replacing this Vector with the newer java.util.List
671	src/att/grappa/GrappaAdapter.java	130	Local variable 'vec' could be declared final
672	src/att/grappa/GrappaAdapter.java	131	Found 'DD'-anomaly for variable 'problem' (lines '131'-'135').
673	src/att/grappa/GrappaAdapter.java	150	Local variable 'obj' could be declared final
674	src/att/grappa/GrappaAdapter.java	151	Use ArrayList instead of Vector
675	src/att/grappa/GrappaAdapter.java	162	Avoid empty if statements
676	src/att/grappa/GrappaAdapter.java	179	Avoid variables with short names like pt
677	src/att/grappa/GrappaAdapter.java	182	Local variable 'popup' could be declared final
678	src/att/grappa/GrappaAdapter.java	183	Found 'DD'-anomaly for variable 'item' (lines '183'-'185').
679	src/att/grappa/GrappaAdapter.java	183	Found 'DD'-anomaly for variable 'item' (lines '183'-'187').
680	src/att/grappa/GrappaAdapter.java	250	Avoid variables with short names like pt
681	src/att/grappa/GrappaAdapter.java	250	The method 'grappaReleased' has a Cyclomatic Complexity of 30.
682	src/att/grappa/GrappaAdapter.java	253	Found 'DD'-anomaly for variable 'xorOutline' (lines '253'-'268').
683	src/att/grappa/GrappaAdapter.java	263	Assigning an Object to null is a code smell. Consider refactoring.
684	src/att/grappa/GrappaAdapter.java	286	Avoid if (x != y) ..; else ..;
685	src/att/grappa/GrappaAdapter.java	300	These nested if statements could be combined
686	src/att/grappa/GrappaAdapter.java	301	These nested if statements could be combined
687	src/att/grappa/GrappaAdapter.java	302	These nested if statements could be combined
688	src/att/grappa/GrappaAdapter.java	303	Use equals() to compare object references.
689	src/att/grappa/GrappaAdapter.java	306	Found 'DD'-anomaly for variable 'attrs' (lines '306'-'309').
690	src/att/grappa/GrappaAdapter.java	306	Found 'DD'-anomaly for variable 'attrs' (lines '306'-'311').
691	src/att/grappa/GrappaAdapter.java	313	Avoid variables with short names like el
692	src/att/grappa/GrappaAdapter.java	319	Use equals() to compare object references.
693	src/att/grappa/GrappaAdapter.java	323	Avoid variables with short names like el
694	src/att/grappa/GrappaAdapter.java	349	These nested if statements could be combined
695	src/att/grappa/GrappaAdapter.java	381	The method 'grappaTip' has a Cyclomatic Complexity of 17.
696	src/att/grappa/GrappaAdapter.java	382	Found 'DD'-anomaly for variable 'tip' (lines '382'-'385').
697	src/att/grappa/GrappaAdapter.java	382	Found 'DD'-anomaly for variable 'tip' (lines '382'-'394').
698	src/att/grappa/GrappaAdapter.java	382	Found 'DD'-anomaly for variable 'tip' (lines '382'-'407').
699	src/att/grappa/GrappaAdapter.java	382	Found 'DD'-anomaly for variable 'tip' (lines '382'-'420').
700	src/att/grappa/GrappaAdapter.java	382	Found 'DU'-anomaly for variable 'tip' (lines '382'-'437').
701	src/att/grappa/GrappaAdapter.java	385	Avoid assignments in operands
702	src/att/grappa/GrappaAdapter.java	385	Found 'DD'-anomaly for variable 'tip' (lines '385'-'386').
703	src/att/grappa/GrappaAdapter.java	386	Avoid assignments in operands
704	src/att/grappa/GrappaAdapter.java	386	Found 'DD'-anomaly for variable 'tip' (lines '386'-'387').
705	src/att/grappa/GrappaAdapter.java	394	Avoid assignments in operands
706	src/att/grappa/GrappaAdapter.java	394	Found 'DD'-anomaly for variable 'tip' (lines '394'-'396').
707	src/att/grappa/GrappaAdapter.java	394	Found 'DD'-anomaly for variable 'tip' (lines '394'-'398').
708	src/att/grappa/GrappaAdapter.java	396	Found 'DD'-anomaly for variable 'tip' (lines '396'-'402').
709	src/att/grappa/GrappaAdapter.java	398	Avoid assignments in operands
710	src/att/grappa/GrappaAdapter.java	398	Found 'DD'-anomaly for variable 'tip' (lines '398'-'399').
711	src/att/grappa/GrappaAdapter.java	398	Found 'DD'-anomaly for variable 'tip' (lines '398'-'402').
712	src/att/grappa/GrappaAdapter.java	399	Found 'DD'-anomaly for variable 'tip' (lines '399'-'402').
713	src/att/grappa/GrappaAdapter.java	402	Prefer StringBuffer over += for concatenating strings
714	src/att/grappa/GrappaAdapter.java	407	Avoid assignments in operands
715	src/att/grappa/GrappaAdapter.java	407	Found 'DD'-anomaly for variable 'tip' (lines '407'-'409').
716	src/att/grappa/GrappaAdapter.java	407	Found 'DD'-anomaly for variable 'tip' (lines '407'-'411').
717	src/att/grappa/GrappaAdapter.java	409	Found 'DD'-anomaly for variable 'tip' (lines '409'-'415').
718	src/att/grappa/GrappaAdapter.java	411	Found 'DD'-anomaly for variable 'tip' (lines '411'-'412').
719	src/att/grappa/GrappaAdapter.java	411	Found 'DD'-anomaly for variable 'tip' (lines '411'-'415').
720	src/att/grappa/GrappaAdapter.java	412	Found 'DD'-anomaly for variable 'tip' (lines '412'-'415').
721	src/att/grappa/GrappaAdapter.java	415	Prefer StringBuffer over += for concatenating strings
722	src/att/grappa/GrappaAdapter.java	420	Found 'DD'-anomaly for variable 'tip' (lines '420'-'422').
723	src/att/grappa/GrappaAdapter.java	420	Found 'DD'-anomaly for variable 'tip' (lines '420'-'424').
724	src/att/grappa/GrappaAdapter.java	422	Found 'DD'-anomaly for variable 'tip' (lines '422'-'428').
725	src/att/grappa/GrappaAdapter.java	425	Found 'DD'-anomaly for variable 'tip' (lines '425'-'428').
726	src/att/grappa/GrappaAdapter.java	428	Prefer StringBuffer over += for concatenating strings
727	src/att/grappa/GrappaAdapter.java	432	Avoid throwing raw exception types.
728	src/att/grappa/GrappaAdapter.java	436	This statement may have some unnecessary parentheses
729	src/att/grappa/GrappaAdapter.java	450	Avoid really long methods.
730	src/att/grappa/GrappaAdapter.java	450	The method 'actionPerformed' has a Cyclomatic Complexity of 49.
731	src/att/grappa/GrappaAdapter.java	450	The method actionPerformed() has an NCSS line count of 149
732	src/att/grappa/GrappaAdapter.java	450	The method actionPerformed() has an NPath complexity of 247
733	src/att/grappa/GrappaAdapter.java	458	Found 'DU'-anomaly for variable 'subg' (lines '458'-'597').
734	src/att/grappa/GrappaAdapter.java	461	A method should have only one exit point, and that should be the last statement in the method
735	src/att/grappa/GrappaAdapter.java	461	Avoid using if statements without curly braces
736	src/att/grappa/GrappaAdapter.java	472	A method should have only one exit point, and that should be the last statement in the method
737	src/att/grappa/GrappaAdapter.java	472	Avoid using if statements without curly braces
738	src/att/grappa/GrappaAdapter.java	481	Assigning an Object to null is a code smell. Consider refactoring.
739	src/att/grappa/GrappaAdapter.java	484	A method should have only one exit point, and that should be the last statement in the method
740	src/att/grappa/GrappaAdapter.java	484	Avoid using if statements without curly braces
741	src/att/grappa/GrappaAdapter.java	485	A method should have only one exit point, and that should be the last statement in the method
742	src/att/grappa/GrappaAdapter.java	485	Avoid using if statements without curly braces
743	src/att/grappa/GrappaAdapter.java	487	A method should have only one exit point, and that should be the last statement in the method
744	src/att/grappa/GrappaAdapter.java	487	No need to check for null before an instanceof
745	src/att/grappa/GrappaAdapter.java	489	Use ArrayList instead of Vector
746	src/att/grappa/GrappaAdapter.java	491	Avoid using while statements without curly braces
747	src/att/grappa/GrappaAdapter.java	494	Avoid using while statements without curly braces
748	src/att/grappa/GrappaAdapter.java	497	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
749	src/att/grappa/GrappaAdapter.java	502	Found 'DU'-anomaly for variable 'newsubg' (lines '502'-'597').
750	src/att/grappa/GrappaAdapter.java	601	Avoid using implementation types like 'Vector'; use the interface instead
751	src/att/grappa/GrappaAdapter.java	601	Avoid using implementation types like 'Vector'; use the interface instead
752	src/att/grappa/GrappaAdapter.java	602	Found 'DD'-anomaly for variable 'obj' (lines '602'-'604').
753	src/att/grappa/GrappaAdapter.java	602	Found 'DU'-anomaly for variable 'obj' (lines '602'-'654').
754	src/att/grappa/GrappaAdapter.java	609	A high ratio of statements to labels in a switch statement. Consider refactoring.
755	src/att/grappa/GrappaAdapter.java	609	Switch statements should have a default label
756	src/att/grappa/GrappaAdapter.java	616	Avoid instantiating new objects inside loops
757	src/att/grappa/GrappaAdapter.java	616	Use ArrayList instead of Vector
758	src/att/grappa/GrappaAdapter.java	635	Avoid instantiating new objects inside loops
759	src/att/grappa/GrappaAdapter.java	635	Use ArrayList instead of Vector
760	src/att/grappa/GrappaBacker.java	30	Avoid modifiers which are implied by the context
761	src/att/grappa/GrappaBox.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
762	src/att/grappa/GrappaBox.java	28	Document empty constructor
763	src/att/grappa/GrappaBox.java	28	It is a good practice to call super() in a constructor
764	src/att/grappa/GrappaBox.java	36	Avoid variables with short names like r
765	src/att/grappa/GrappaBox.java	36	Parameter 'r' is not assigned and could be declared final
766	src/att/grappa/GrappaBox.java	46	Avoid variables with short names like x
767	src/att/grappa/GrappaBox.java	46	Avoid variables with short names like y
768	src/att/grappa/GrappaBox.java	46	It is a good practice to call super() in a constructor
769	src/att/grappa/GrappaBox.java	46	Parameter 'height' is not assigned and could be declared final
770	src/att/grappa/GrappaBox.java	46	Parameter 'width' is not assigned and could be declared final
771	src/att/grappa/GrappaBox.java	46	Parameter 'x' is not assigned and could be declared final
772	src/att/grappa/GrappaBox.java	46	Parameter 'y' is not assigned and could be declared final
773	src/att/grappa/GrappaBox.java	65	It is a good practice to call super() in a constructor
774	src/att/grappa/GrappaBox.java	73	New exception is thrown in catch block, original stack trace may be lost
775	src/att/grappa/GrappaBox.java	124	This statement may have some unnecessary parentheses
776	src/att/grappa/GrappaBox.java	134	This statement may have some unnecessary parentheses
777	src/att/grappa/GrappaBox.java	154	This statement may have some unnecessary parentheses
778	src/att/grappa/GrappaColor.java	23	Abstract classes should be named AbstractXXX
779	src/att/grappa/GrappaColor.java	23	The class 'GrappaColor' has a Cyclomatic Complexity of 7 (Highest = 23).
780	src/att/grappa/GrappaColor.java	23	This abstract class does not have any abstract methods
781	src/att/grappa/GrappaColor.java	26	Consider replacing this Hashtable with the newer java.util.Map
782	src/att/grappa/GrappaColor.java	28	Consider replacing this Hashtable with the newer java.util.Map
783	src/att/grappa/GrappaColor.java	54	The String literal "black" appears 4 times in this file; the first occurrence is on line 54
784	src/att/grappa/GrappaColor.java	698	Variables that are final and static should be in all caps.
785	src/att/grappa/GrappaColor.java	702	Variables that are final and static should be in all caps.
786	src/att/grappa/GrappaColor.java	706	Variables that are final and static should be in all caps.
787	src/att/grappa/GrappaColor.java	710	Variables that are final and static should be in all caps.
788	src/att/grappa/GrappaColor.java	714	Variables that are final and static should be in all caps.
789	src/att/grappa/GrappaColor.java	727	Parameter 'color' is not assigned and could be declared final
790	src/att/grappa/GrappaColor.java	727	Parameter 'name' is not assigned and could be declared final
791	src/att/grappa/GrappaColor.java	731	Local variable 'canonName' could be declared final
792	src/att/grappa/GrappaColor.java	739	Parameter 'color' is not assigned and could be declared final
793	src/att/grappa/GrappaColor.java	739	Parameter 'name' is not assigned and could be declared final
794	src/att/grappa/GrappaColor.java	739	Parameter 'override' is not assigned and could be declared final
795	src/att/grappa/GrappaColor.java	741	Avoid using if statements without curly braces
796	src/att/grappa/GrappaColor.java	750	The method 'canonColor' has a Cyclomatic Complexity of 23.
797	src/att/grappa/GrappaColor.java	750	The method canonColor() has an NPath complexity of 4032
798	src/att/grappa/GrappaColor.java	754	A method should have only one exit point, and that should be the last statement in the method
799	src/att/grappa/GrappaColor.java	754	Avoid using if statements without curly braces
800	src/att/grappa/GrappaColor.java	756	Found 'DU'-anomaly for variable 'len' (lines '756'-'806').
801	src/att/grappa/GrappaColor.java	758	Found 'DD'-anomaly for variable 'commaSpots' (lines '758'-'772').
802	src/att/grappa/GrappaColor.java	758	Found 'DD'-anomaly for variable 'commaSpots' (lines '758'-'783').
803	src/att/grappa/GrappaColor.java	758	Found 'DU'-anomaly for variable 'commaSpots' (lines '758'-'806').
804	src/att/grappa/GrappaColor.java	759	Found 'DD'-anomaly for variable 'dots' (lines '759'-'777').
805	src/att/grappa/GrappaColor.java	760	Found 'DD'-anomaly for variable 'allDigits' (lines '760'-'764').
806	src/att/grappa/GrappaColor.java	760	Found 'DD'-anomaly for variable 'allDigits' (lines '760'-'767').
807	src/att/grappa/GrappaColor.java	764	Found 'DD'-anomaly for variable 'allDigits' (lines '764'-'764').
808	src/att/grappa/GrappaColor.java	764	Found 'DD'-anomaly for variable 'allDigits' (lines '764'-'767').
809	src/att/grappa/GrappaColor.java	767	Found 'DD'-anomaly for variable 'allDigits' (lines '767'-'764').
810	src/att/grappa/GrappaColor.java	767	Found 'DD'-anomaly for variable 'allDigits' (lines '767'-'767').
811	src/att/grappa/GrappaColor.java	772	Found 'DD'-anomaly for variable 'commaSpots' (lines '772'-'772').
812	src/att/grappa/GrappaColor.java	772	Found 'DD'-anomaly for variable 'commaSpots' (lines '772'-'783').
813	src/att/grappa/GrappaColor.java	772	Found 'DU'-anomaly for variable 'commaSpots' (lines '772'-'806').
814	src/att/grappa/GrappaColor.java	777	Found 'DD'-anomaly for variable 'dots' (lines '777'-'777').
815	src/att/grappa/GrappaColor.java	783	Found 'DU'-anomaly for variable 'commaSpots' (lines '783'-'806').
816	src/att/grappa/GrappaColor.java	784	Found 'DU'-anomaly for variable 'prev' (lines '784'-'806').
817	src/att/grappa/GrappaColor.java	787	Unnecessary wrapper object creation
818	src/att/grappa/GrappaColor.java	788	Found 'DU'-anomaly for variable 'prev' (lines '788'-'806').
819	src/att/grappa/GrappaColor.java	791	A method should have only one exit point, and that should be the last statement in the method
820	src/att/grappa/GrappaColor.java	793	A method should have only one exit point, and that should be the last statement in the method
821	src/att/grappa/GrappaColor.java	795	A method should have only one exit point, and that should be the last statement in the method
822	src/att/grappa/GrappaColor.java	795	Avoid using if statements without curly braces
823	src/att/grappa/GrappaColor.java	797	Avoid variables with short names like l
824	src/att/grappa/GrappaColor.java	797	Local variable 'l' could be declared final
825	src/att/grappa/GrappaColor.java	823	Avoid reassigning parameters such as 'color'
826	src/att/grappa/GrappaColor.java	824	Avoid using if statements without curly braces
827	src/att/grappa/GrappaColor.java	826	A method should have only one exit point, and that should be the last statement in the method
828	src/att/grappa/GrappaColor.java	826	Avoid using if statements without curly braces
829	src/att/grappa/GrappaColor.java	828	Local variable 'hsb' could be declared final
830	src/att/grappa/GrappaColor.java	830	Local variable 'canonName' could be declared final
831	src/att/grappa/GrappaColor.java	862	Local variable 'hsb' could be declared final
832	src/att/grappa/GrappaColor.java	865	This statement may have some unnecessary parentheses
833	src/att/grappa/GrappaConstants.java	20	An Interface should be used only to model a behaviour; consider converting this to a class.
834	src/att/grappa/GrappaConstants.java	25	Avoid modifiers which are implied by the context
835	src/att/grappa/GrappaConstants.java	30	Avoid modifiers which are implied by the context
836	src/att/grappa/GrappaConstants.java	34	Avoid modifiers which are implied by the context
837	src/att/grappa/GrappaConstants.java	38	Avoid modifiers which are implied by the context
838	src/att/grappa/GrappaConstants.java	43	Avoid modifiers which are implied by the context
839	src/att/grappa/GrappaConstants.java	125	Variables that are final and static should be in all caps.
840	src/att/grappa/GrappaConstants.java	184	Avoid excessively long variable names like GRAPPA_BACKGROUND_COLOR_ATTR
841	src/att/grappa/GrappaConstants.java	188	Avoid excessively long variable names like GRAPPA_SELECTION_STYLE_ATTR
842	src/att/grappa/GrappaConstants.java	192	Avoid excessively long variable names like GRAPPA_DELETION_STYLE_ATTR
843	src/att/grappa/GrappaConstants.java	196	Avoid excessively long variable names like GRAPPA_FONTSIZE_ADJUSTMENT_ATTR
844	src/att/grappa/GrappaConstants.java	369	Avoid excessively long variable names like GRAPPA_BACKGROUND_COLOR_HASH
845	src/att/grappa/GrappaLine.java	28	The class 'GrappaLine' has a Cyclomatic Complexity of 3 (Highest = 32).
846	src/att/grappa/GrappaLine.java	32	This class has too many methods, consider refactoring it.
847	src/att/grappa/GrappaLine.java	36	Variables that are final and static should be in all caps.
848	src/att/grappa/GrappaLine.java	41	Variables that are final and static should be in all caps.
849	src/att/grappa/GrappaLine.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
850	src/att/grappa/GrappaLine.java	65	Found non-transient, non-static member. Please mark as transient or provide accessors.
851	src/att/grappa/GrappaLine.java	67	Found non-transient, non-static member. Please mark as transient or provide accessors.
852	src/att/grappa/GrappaLine.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
853	src/att/grappa/GrappaLine.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
854	src/att/grappa/GrappaLine.java	72	Private field 'windingRule' could be made final; it is only initialized in the declaration or constructor.
855	src/att/grappa/GrappaLine.java	88	Parameter 'pts' is not assigned and could be declared final
856	src/att/grappa/GrappaLine.java	88	Parameter 'type' is not assigned and could be declared final
857	src/att/grappa/GrappaLine.java	100	Parameter 'curve' is not assigned and could be declared final
858	src/att/grappa/GrappaLine.java	116	Parameter 'obj' is not assigned and could be declared final
859	src/att/grappa/GrappaLine.java	117	A method should have only one exit point, and that should be the last statement in the method
860	src/att/grappa/GrappaLine.java	117	Avoid using if statements without curly braces
861	src/att/grappa/GrappaLine.java	117	No need to check for null before an instanceof
862	src/att/grappa/GrappaLine.java	117	This statement may have some unnecessary parentheses
863	src/att/grappa/GrappaLine.java	118	Local variable 'cmp' could be declared final
864	src/att/grappa/GrappaLine.java	119	A method should have only one exit point, and that should be the last statement in the method
865	src/att/grappa/GrappaLine.java	119	Avoid using if statements without curly braces
866	src/att/grappa/GrappaLine.java	119	This statement may have some unnecessary parentheses
867	src/att/grappa/GrappaLine.java	120	A method should have only one exit point, and that should be the last statement in the method
868	src/att/grappa/GrappaLine.java	120	Avoid using if statements without curly braces
869	src/att/grappa/GrappaLine.java	120	This statement may have some unnecessary parentheses
870	src/att/grappa/GrappaLine.java	121	A method should have only one exit point, and that should be the last statement in the method
871	src/att/grappa/GrappaLine.java	121	Avoid using if statements without curly braces
872	src/att/grappa/GrappaLine.java	121	This statement may have some unnecessary parentheses
873	src/att/grappa/GrappaLine.java	124	This statement may have some unnecessary parentheses
874	src/att/grappa/GrappaLine.java	149	Avoid variables with short names like pt
875	src/att/grappa/GrappaLine.java	149	Parameter 'pt' is not assigned and could be declared final
876	src/att/grappa/GrappaLine.java	170	Avoid variables with short names like ps
877	src/att/grappa/GrappaLine.java	171	Avoid variables with short names like pe
878	src/att/grappa/GrappaLine.java	172	Found 'DD'-anomaly for variable 'spacer' (lines '172'-'177').
879	src/att/grappa/GrappaLine.java	172	Found 'DU'-anomaly for variable 'spacer' (lines '172'-'197').
880	src/att/grappa/GrappaLine.java	173	Local variable 'buf' could be declared final
881	src/att/grappa/GrappaLine.java	177	Found 'DU'-anomaly for variable 'spacer' (lines '177'-'197').
882	src/att/grappa/GrappaLine.java	184	Found 'DU'-anomaly for variable 'spacer' (lines '184'-'197').
883	src/att/grappa/GrappaLine.java	190	Avoid appending characters as strings in StringBuffer.append.
884	src/att/grappa/GrappaLine.java	192	Found 'DU'-anomaly for variable 'spacer' (lines '192'-'197').
885	src/att/grappa/GrappaLine.java	205	Avoid variables with short names like ps
886	src/att/grappa/GrappaLine.java	206	Avoid variables with short names like pe
887	src/att/grappa/GrappaLine.java	207	Found 'DD'-anomaly for variable 'spacer' (lines '207'-'214').
888	src/att/grappa/GrappaLine.java	207	Found 'DU'-anomaly for variable 'spacer' (lines '207'-'238').
889	src/att/grappa/GrappaLine.java	208	Local variable 'buf' could be declared final
890	src/att/grappa/GrappaLine.java	212	Avoid appending characters as strings in StringBuffer.append.
891	src/att/grappa/GrappaLine.java	214	Found 'DU'-anomaly for variable 'spacer' (lines '214'-'238').
892	src/att/grappa/GrappaLine.java	221	Found 'DU'-anomaly for variable 'spacer' (lines '221'-'238').
893	src/att/grappa/GrappaLine.java	224	Avoid appending characters as strings in StringBuffer.append.
894	src/att/grappa/GrappaLine.java	229	Avoid appending characters as strings in StringBuffer.append.
895	src/att/grappa/GrappaLine.java	231	Found 'DU'-anomaly for variable 'spacer' (lines '231'-'238').
896	src/att/grappa/GrappaLine.java	234	Avoid appending characters as strings in StringBuffer.append.
897	src/att/grappa/GrappaLine.java	249	Found 'DD'-anomaly for variable 'changed' (lines '249'-'251').
898	src/att/grappa/GrappaLine.java	265	Local variable 'theta' could be declared final
899	src/att/grappa/GrappaLine.java	266	Local variable 'half_width' could be declared final
900	src/att/grappa/GrappaLine.java	288	Avoid really long methods.
901	src/att/grappa/GrappaLine.java	288	The method 'updateLine' has a Cyclomatic Complexity of 32.
902	src/att/grappa/GrappaLine.java	288	The method updateLine() has an NPath complexity of 1260000
903	src/att/grappa/GrappaLine.java	292	Found 'DD'-anomaly for variable 'pts' (lines '292'-'320').
904	src/att/grappa/GrappaLine.java	293	Found 'DD'-anomaly for variable 'wasSpace' (lines '293'-'301').
905	src/att/grappa/GrappaLine.java	294	Found 'DD'-anomaly for variable 'grpts' (lines '294'-'325').
906	src/att/grappa/GrappaLine.java	294	Found 'DU'-anomaly for variable 'grpts' (lines '294'-'391').
907	src/att/grappa/GrappaLine.java	295	Avoid unused local variables such as 'attr_type'.
908	src/att/grappa/GrappaLine.java	298	Found 'DU'-anomaly for variable 'j' (lines '298'-'391').
909	src/att/grappa/GrappaLine.java	310	Avoid using if statements without curly braces
910	src/att/grappa/GrappaLine.java	325	Found 'DD'-anomaly for variable 'grpts' (lines '325'-'334').
911	src/att/grappa/GrappaLine.java	334	Found 'DD'-anomaly for variable 'grpts' (lines '334'-'348').
912	src/att/grappa/GrappaLine.java	362	Found 'DD'-anomaly for variable 'grpts' (lines '362'-'376').
913	src/att/grappa/GrappaLine.java	370	Found 'DU'-anomaly for variable 'j' (lines '370'-'391').
914	src/att/grappa/GrappaLine.java	376	Avoid instantiating new objects inside loops
915	src/att/grappa/GrappaLine.java	376	Found 'DD'-anomaly for variable 'grpts' (lines '376'-'376').
916	src/att/grappa/GrappaLine.java	384	Found 'DU'-anomaly for variable 'j' (lines '384'-'391').
917	src/att/grappa/GrappaLine.java	394	The method 'updateLine' has a Cyclomatic Complexity of 11.
918	src/att/grappa/GrappaLine.java	394	The method updateLine() has an NPath complexity of 384
919	src/att/grappa/GrappaLine.java	394	The user-supplied array 'grpts' is stored directly.
920	src/att/grappa/GrappaLine.java	395	Found 'DU'-anomaly for variable 'pts' (lines '395'-'457').
921	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'x' (lines '398'-'410').
922	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'x2' (lines '398'-'422').
923	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'x2' (lines '398'-'440').
924	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'x3' (lines '398'-'422').
925	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'x3' (lines '398'-'440').
926	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'y' (lines '398'-'410').
927	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'y2' (lines '398'-'422').
928	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'y2' (lines '398'-'440').
929	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'y3' (lines '398'-'422').
930	src/att/grappa/GrappaLine.java	398	Found 'DD'-anomaly for variable 'y3' (lines '398'-'440').
931	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'x' (lines '398'-'457').
932	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'x2' (lines '398'-'457').
933	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'x3' (lines '398'-'457').
934	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'y' (lines '398'-'457').
935	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'y2' (lines '398'-'457').
936	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'y3' (lines '398'-'457').
937	src/att/grappa/GrappaLine.java	398	Found 'DU'-anomaly for variable 'z' (lines '398'-'457').
938	src/att/grappa/GrappaLine.java	403	Found 'DU'-anomaly for variable 'grpath' (lines '403'-'457').
939	src/att/grappa/GrappaLine.java	404	Found 'DU'-anomaly for variable 'grtestpath' (lines '404'-'457').
940	src/att/grappa/GrappaLine.java	412	Avoid if (x != y) ..; else ..;
941	src/att/grappa/GrappaLine.java	417	Avoid using if...else statements without curly braces
942	src/att/grappa/GrappaLine.java	418	Found 'DD'-anomaly for variable 'lastWasLine' (lines '418'-'420').
943	src/att/grappa/GrappaLine.java	418	Found 'DU'-anomaly for variable 'lastWasLine' (lines '418'-'457').
944	src/att/grappa/GrappaLine.java	420	Found 'DD'-anomaly for variable 'lastWasLine' (lines '420'-'420').
945	src/att/grappa/GrappaLine.java	420	Found 'DD'-anomaly for variable 'lastWasLine' (lines '420'-'429').
946	src/att/grappa/GrappaLine.java	420	Found 'DU'-anomaly for variable 'lastWasLine' (lines '420'-'457').
947	src/att/grappa/GrappaLine.java	429	Found 'DD'-anomaly for variable 'lastWasLine' (lines '429'-'420').
948	src/att/grappa/GrappaLine.java	429	Found 'DU'-anomaly for variable 'lastWasLine' (lines '429'-'457').
949	src/att/grappa/GrappaLine.java	447	Found 'DU'-anomaly for variable 'lastWasLine' (lines '447'-'457').
950	src/att/grappa/GrappaLine.java	472	clone() method should throw CloneNotSupportedException
951	src/att/grappa/GrappaLine.java	482	New exception is thrown in catch block, original stack trace may be lost
952	src/att/grappa/GrappaListener.java	30	Avoid modifiers which are implied by the context
953	src/att/grappa/GrappaListener.java	30	Avoid variables with short names like pt
954	src/att/grappa/GrappaListener.java	41	Avoid modifiers which are implied by the context
955	src/att/grappa/GrappaListener.java	41	Avoid variables with short names like pt
956	src/att/grappa/GrappaListener.java	56	Avoid modifiers which are implied by the context
957	src/att/grappa/GrappaListener.java	56	Avoid variables with short names like pt
958	src/att/grappa/GrappaListener.java	70	Avoid modifiers which are implied by the context
959	src/att/grappa/GrappaListener.java	83	Avoid modifiers which are implied by the context
960	src/att/grappa/GrappaListener.java	83	Avoid variables with short names like pt
961	src/att/grappa/GrappaNexus.java	42	Avoid really long classes.
962	src/att/grappa/GrappaNexus.java	42	The class 'GrappaNexus' has a Cyclomatic Complexity of 14 (Highest = 106).
963	src/att/grappa/GrappaNexus.java	42	Too many fields
964	src/att/grappa/GrappaNexus.java	46	This class has too many methods, consider refactoring it.
965	src/att/grappa/GrappaNexus.java	63	A catch statement should never catch throwable since it includes errors.
966	src/att/grappa/GrappaNexus.java	63	Avoid empty catch blocks
967	src/att/grappa/GrappaNexus.java	70	Found non-transient, non-static member. Please mark as transient or provide accessors.
968	src/att/grappa/GrappaNexus.java	70	Use explicit scoping instead of the default package private level
969	src/att/grappa/GrappaNexus.java	71	Found non-transient, non-static member. Please mark as transient or provide accessors.
970	src/att/grappa/GrappaNexus.java	71	Use explicit scoping instead of the default package private level
971	src/att/grappa/GrappaNexus.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
972	src/att/grappa/GrappaNexus.java	72	Use explicit scoping instead of the default package private level
973	src/att/grappa/GrappaNexus.java	73	Found non-transient, non-static member. Please mark as transient or provide accessors.
974	src/att/grappa/GrappaNexus.java	73	Use explicit scoping instead of the default package private level
975	src/att/grappa/GrappaNexus.java	74	Found non-transient, non-static member. Please mark as transient or provide accessors.
976	src/att/grappa/GrappaNexus.java	74	Use explicit scoping instead of the default package private level
977	src/att/grappa/GrappaNexus.java	88	Avoid unused private fields such as 'custom_shape'.
978	src/att/grappa/GrappaNexus.java	88	Perhaps 'custom_shape' could be replaced by a local variable.
979	src/att/grappa/GrappaNexus.java	88	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
980	src/att/grappa/GrappaNexus.java	119	Avoid excessively long variable names like lastDecorationUpdate
981	src/att/grappa/GrappaNexus.java	125	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
982	src/att/grappa/GrappaNexus.java	128	Private field 'windingRule' could be made final; it is only initialized in the declaration or constructor.
983	src/att/grappa/GrappaNexus.java	140	Parameter 'elem' is not assigned and could be declared final
984	src/att/grappa/GrappaNexus.java	142	Overridable method 'rebuild' called during object construction
985	src/att/grappa/GrappaNexus.java	210	Avoid really long methods.
986	src/att/grappa/GrappaNexus.java	210	The method 'updateShape' has a Cyclomatic Complexity of 89.
987	src/att/grappa/GrappaNexus.java	210	The method updateShape() has an NCSS line count of 236
988	src/att/grappa/GrappaNexus.java	210	The method updateShape() has an NPath complexity of 208687765
989	src/att/grappa/GrappaNexus.java	211	Found 'DU'-anomaly for variable 'thisShapeUpdate' (lines '211'-'602').
990	src/att/grappa/GrappaNexus.java	211	Local variable 'thisShapeUpdate' could be declared final
991	src/att/grappa/GrappaNexus.java	212	A high ratio of statements to labels in a switch statement. Consider refactoring.
992	src/att/grappa/GrappaNexus.java	215	Assigning an Object to null is a code smell. Consider refactoring.
993	src/att/grappa/GrappaNexus.java	216	Assigning an Object to null is a code smell. Consider refactoring.
994	src/att/grappa/GrappaNexus.java	218	Avoid using if statements without curly braces
995	src/att/grappa/GrappaNexus.java	221	Local variable 'node' could be declared final
996	src/att/grappa/GrappaNexus.java	222	Found 'DU'-anomaly for variable 'pos' (lines '222'-'602').
997	src/att/grappa/GrappaNexus.java	222	Local variable 'pos' could be declared final
998	src/att/grappa/GrappaNexus.java	223	Local variable 'Width' could be declared final
999	src/att/grappa/GrappaNexus.java	224	Local variable 'Height' could be declared final
1000	src/att/grappa/GrappaNexus.java	227	Found 'DU'-anomaly for variable 'width' (lines '227'-'602').
1001	src/att/grappa/GrappaNexus.java	228	Found 'DU'-anomaly for variable 'height' (lines '228'-'602').
1002	src/att/grappa/GrappaNexus.java	240	Found 'DU'-anomaly for variable 'peripheries' (lines '240'-'602').
1003	src/att/grappa/GrappaNexus.java	241	Found 'DU'-anomaly for variable 'sides' (lines '241'-'602').
1004	src/att/grappa/GrappaNexus.java	242	Found 'DU'-anomaly for variable 'distortion' (lines '242'-'602').
1005	src/att/grappa/GrappaNexus.java	243	Found 'DU'-anomaly for variable 'skew' (lines '243'-'602').
1006	src/att/grappa/GrappaNexus.java	245	Found 'DU'-anomaly for variable 'rotation' (lines '245'-'602').
1007	src/att/grappa/GrappaNexus.java	261	Found 'DU'-anomaly for variable 'custom_class' (lines '261'-'602').
1008	src/att/grappa/GrappaNexus.java	264	New exception is thrown in catch block, original stack trace may be lost
1009	src/att/grappa/GrappaNexus.java	274	New exception is thrown in catch block, original stack trace may be lost
1010	src/att/grappa/GrappaNexus.java	284	An instanceof check is being performed on the caught exception. Create a separate catch clause for this exception type.
1011	src/att/grappa/GrappaNexus.java	285	Avoid variables with short names like t
1012	src/att/grappa/GrappaNexus.java	287	An instanceof check is being performed on the caught exception. Create a separate catch clause for this exception type.
1013	src/att/grappa/GrappaNexus.java	290	New exception is thrown in catch block, original stack trace may be lost
1014	src/att/grappa/GrappaNexus.java	315	Avoid instantiating new objects inside loops
1015	src/att/grappa/GrappaNexus.java	327	Avoid instantiating new objects inside loops
1016	src/att/grappa/GrappaNexus.java	369	Avoid instantiating new objects inside loops
1017	src/att/grappa/GrappaNexus.java	383	Avoid instantiating new objects inside loops
1018	src/att/grappa/GrappaNexus.java	427	Avoid instantiating new objects inside loops
1019	src/att/grappa/GrappaNexus.java	493	Found 'DD'-anomaly for variable 'rects' (lines '493'-'495').
1020	src/att/grappa/GrappaNexus.java	494	Avoid using if statements without curly braces
1021	src/att/grappa/GrappaNexus.java	509	Found 'DD'-anomaly for variable 'theta' (lines '509'-'511').
1022	src/att/grappa/GrappaNexus.java	514	Avoid using if...else statements without curly braces
1023	src/att/grappa/GrappaNexus.java	516	Avoid using if...else statements without curly braces
1024	src/att/grappa/GrappaNexus.java	523	Avoid using if statements without curly braces
1025	src/att/grappa/GrappaNexus.java	526	Avoid assignments in operands
1026	src/att/grappa/GrappaNexus.java	529	Avoid if (x != y) ..; else ..;
1027	src/att/grappa/GrappaNexus.java	549	Found 'DD'-anomaly for variable 'elem' (lines '549'-'552').
1028	src/att/grappa/GrappaNexus.java	553	Avoid using if statements without curly braces
1029	src/att/grappa/GrappaNexus.java	553	Use equals() to compare object references.
1030	src/att/grappa/GrappaNexus.java	609	Found 'DU'-anomaly for variable 'thisStyleUpdate' (lines '609'-'624').
1031	src/att/grappa/GrappaNexus.java	610	Avoid assignments in operands
1032	src/att/grappa/GrappaNexus.java	621	Assigning an Object to null is a code smell. Consider refactoring.
1033	src/att/grappa/GrappaNexus.java	631	Avoid really long methods.
1034	src/att/grappa/GrappaNexus.java	631	The method 'updateText' has a Cyclomatic Complexity of 77.
1035	src/att/grappa/GrappaNexus.java	631	The method updateText() has an NCSS line count of 197
1036	src/att/grappa/GrappaNexus.java	632	Found 'DD'-anomaly for variable 'tstr' (lines '632'-'824').
1037	src/att/grappa/GrappaNexus.java	635	Found 'DD'-anomaly for variable 'tfont' (lines '635'-'706').
1038	src/att/grappa/GrappaNexus.java	638	Found 'DD'-anomaly for variable 'offset' (lines '638'-'822').
1039	src/att/grappa/GrappaNexus.java	641	Found 'DD'-anomaly for variable 'lcnt' (lines '641'-'656').
1040	src/att/grappa/GrappaNexus.java	642	Found 'DD'-anomaly for variable 'hasEdgeLabel' (lines '642'-'666').
1041	src/att/grappa/GrappaNexus.java	643	Found 'DD'-anomaly for variable 'attr' (lines '643'-'663').
1042	src/att/grappa/GrappaNexus.java	652	Avoid using if statements without curly braces
1043	src/att/grappa/GrappaNexus.java	656	Found 'DD'-anomaly for variable 'lcnt' (lines '656'-'665').
1044	src/att/grappa/GrappaNexus.java	657	Assigning an Object to null is a code smell. Consider refactoring.
1045	src/att/grappa/GrappaNexus.java	657	Avoid using if...else statements without curly braces
1046	src/att/grappa/GrappaNexus.java	659	Found 'DD'-anomaly for variable 'headstr' (lines '659'-'663').
1047	src/att/grappa/GrappaNexus.java	659	Found 'DD'-anomaly for variable 'tailstr' (lines '659'-'668').
1048	src/att/grappa/GrappaNexus.java	660	Found 'DD'-anomaly for variable 'headpt' (lines '660'-'664').
1049	src/att/grappa/GrappaNexus.java	660	Found 'DD'-anomaly for variable 'tailpt' (lines '660'-'669').
1050	src/att/grappa/GrappaNexus.java	663	Avoid assignments in operands
1051	src/att/grappa/GrappaNexus.java	663	Avoid if (x != y) ..; else ..;
1052	src/att/grappa/GrappaNexus.java	663	Found 'DU'-anomaly for variable 'headstr' (lines '663'-'940').
1053	src/att/grappa/GrappaNexus.java	664	Found 'DU'-anomaly for variable 'headpt' (lines '664'-'940').
1054	src/att/grappa/GrappaNexus.java	665	Found 'DD'-anomaly for variable 'lcnt' (lines '665'-'670').
1055	src/att/grappa/GrappaNexus.java	666	Found 'DD'-anomaly for variable 'hasEdgeLabel' (lines '666'-'671').
1056	src/att/grappa/GrappaNexus.java	667	Assigning an Object to null is a code smell. Consider refactoring.
1057	src/att/grappa/GrappaNexus.java	667	Avoid using if...else statements without curly braces
1058	src/att/grappa/GrappaNexus.java	668	Avoid assignments in operands
1059	src/att/grappa/GrappaNexus.java	668	Avoid if (x != y) ..; else ..;
1060	src/att/grappa/GrappaNexus.java	668	Found 'DU'-anomaly for variable 'tailstr' (lines '668'-'940').
1061	src/att/grappa/GrappaNexus.java	669	Found 'DU'-anomaly for variable 'tailpt' (lines '669'-'940').
1062	src/att/grappa/GrappaNexus.java	670	Found 'DU'-anomaly for variable 'lcnt' (lines '670'-'940').
1063	src/att/grappa/GrappaNexus.java	672	Avoid using if...else statements without curly braces
1064	src/att/grappa/GrappaNexus.java	708	Avoid unused local variables such as 'rectString'.
1065	src/att/grappa/GrappaNexus.java	708	Found 'DU'-anomaly for variable 'rectString' (lines '708'-'940').
1066	src/att/grappa/GrappaNexus.java	711	Avoid variables with short names like i
1067	src/att/grappa/GrappaNexus.java	717	Avoid variables with short names like ch
1068	src/att/grappa/GrappaNexus.java	718	Avoid unused local variables such as 'str'.
1069	src/att/grappa/GrappaNexus.java	721	Avoid variables with short names like x
1070	src/att/grappa/GrappaNexus.java	736	Avoid if (x != y) ..; else ..;
1071	src/att/grappa/GrappaNexus.java	746	Avoid variables with short names like sg
1072	src/att/grappa/GrappaNexus.java	767	Avoid assignments in operands
1073	src/att/grappa/GrappaNexus.java	803	Found 'DD'-anomaly for variable 'lines' (lines '803'-'817').
1074	src/att/grappa/GrappaNexus.java	817	Found 'DD'-anomaly for variable 'lines' (lines '817'-'817').
1075	src/att/grappa/GrappaNexus.java	823	Found 'DD'-anomaly for variable 'tpos' (lines '823'-'923').
1076	src/att/grappa/GrappaNexus.java	824	Found 'DD'-anomaly for variable 'tstr' (lines '824'-'852').
1077	src/att/grappa/GrappaNexus.java	834	Found 'DD'-anomaly for variable 'justification' (lines '834'-'858').
1078	src/att/grappa/GrappaNexus.java	835	Found 'DD'-anomaly for variable 'bnds' (lines '835'-'853').
1079	src/att/grappa/GrappaNexus.java	836	Found 'DD'-anomaly for variable 'mtrc' (lines '836'-'854').
1080	src/att/grappa/GrappaNexus.java	841	Found 'DD'-anomaly for variable 'ch' (lines '841'-'846').
1081	src/att/grappa/GrappaNexus.java	842	Found 'DD'-anomaly for variable 'str' (lines '842'-'842').
1082	src/att/grappa/GrappaNexus.java	842	Found 'DU'-anomaly for variable 'str' (lines '842'-'940').
1083	src/att/grappa/GrappaNexus.java	854	Found 'DD'-anomaly for variable 'mtrc' (lines '854'-'854').
1084	src/att/grappa/GrappaNexus.java	854	Found 'DD'-anomaly for variable 'mtrc' (lines '854'-'867').
1085	src/att/grappa/GrappaNexus.java	854	Found 'DU'-anomaly for variable 'mtrc' (lines '854'-'940').
1086	src/att/grappa/GrappaNexus.java	858	Found 'DD'-anomaly for variable 'justification' (lines '858'-'858').
1087	src/att/grappa/GrappaNexus.java	858	Found 'DD'-anomaly for variable 'justification' (lines '858'-'859').
1088	src/att/grappa/GrappaNexus.java	858	Found 'DD'-anomaly for variable 'justification' (lines '858'-'871').
1089	src/att/grappa/GrappaNexus.java	858	Found 'DD'-anomaly for variable 'justification' (lines '858'-'872').
1090	src/att/grappa/GrappaNexus.java	858	Found 'DD'-anomaly for variable 'justification' (lines '858'-'873').
1091	src/att/grappa/GrappaNexus.java	858	Found 'DU'-anomaly for variable 'justification' (lines '858'-'940').
1092	src/att/grappa/GrappaNexus.java	859	Found 'DD'-anomaly for variable 'justification' (lines '859'-'871').
1093	src/att/grappa/GrappaNexus.java	859	Found 'DD'-anomaly for variable 'justification' (lines '859'-'872').
1094	src/att/grappa/GrappaNexus.java	859	Found 'DD'-anomaly for variable 'justification' (lines '859'-'873').
1095	src/att/grappa/GrappaNexus.java	867	Found 'DD'-anomaly for variable 'mtrc' (lines '867'-'836').
1096	src/att/grappa/GrappaNexus.java	867	Found 'DU'-anomaly for variable 'mtrc' (lines '867'-'940').
1097	src/att/grappa/GrappaNexus.java	871	Found 'DU'-anomaly for variable 'justification' (lines '871'-'940').
1098	src/att/grappa/GrappaNexus.java	872	Found 'DU'-anomaly for variable 'justification' (lines '872'-'940').
1099	src/att/grappa/GrappaNexus.java	873	Found 'DU'-anomaly for variable 'justification' (lines '873'-'940').
1100	src/att/grappa/GrappaNexus.java	898	Found 'DU'-anomaly for variable 'top' (lines '898'-'940').
1101	src/att/grappa/GrappaNexus.java	904	Found 'DD'-anomaly for variable 'x' (lines '904'-'908').
1102	src/att/grappa/GrappaNexus.java	904	Found 'DD'-anomaly for variable 'x' (lines '904'-'911').
1103	src/att/grappa/GrappaNexus.java	904	Found 'DD'-anomaly for variable 'x' (lines '904'-'913').
1104	src/att/grappa/GrappaNexus.java	904	Found 'DU'-anomaly for variable 'x' (lines '904'-'940').
1105	src/att/grappa/GrappaNexus.java	923	Found 'DD'-anomaly for variable 'tpos' (lines '923'-'923').
1106	src/att/grappa/GrappaNexus.java	947	The method 'updateDecoration' has a Cyclomatic Complexity of 15.
1107	src/att/grappa/GrappaNexus.java	947	The method updateDecoration() has an NPath complexity of 603
1108	src/att/grappa/GrappaNexus.java	948	Avoid excessively long variable names like thisDecorationUpdate
1109	src/att/grappa/GrappaNexus.java	952	No need to check for null before an instanceof
1110	src/att/grappa/GrappaNexus.java	955	Found 'DD'-anomaly for variable 'dir' (lines '955'-'958').
1111	src/att/grappa/GrappaNexus.java	975	Found 'DD'-anomaly for variable 'line_dir' (lines '975'-'977').
1112	src/att/grappa/GrappaNexus.java	990	Found 'DD'-anomaly for variable 'line_dir' (lines '990'-'992').
1113	src/att/grappa/GrappaNexus.java	1013	Avoid if (x != y) ..; else ..;
1114	src/att/grappa/GrappaNexus.java	1018	Found 'DD'-anomaly for variable 'raw_image' (lines '1,018'-'1,022').
1115	src/att/grappa/GrappaNexus.java	1024	Avoid empty catch blocks
1116	src/att/grappa/GrappaNexus.java	1030	Avoid empty catch blocks
1117	src/att/grappa/GrappaNexus.java	1050	Parameter 'flags' is not assigned and could be declared final
1118	src/att/grappa/GrappaNexus.java	1050	Parameter 'height' is not assigned and could be declared final
1119	src/att/grappa/GrappaNexus.java	1050	Parameter 'image' is not assigned and could be declared final
1120	src/att/grappa/GrappaNexus.java	1050	Parameter 'width' is not assigned and could be declared final
1121	src/att/grappa/GrappaNexus.java	1052	Found 'DD'-anomaly for variable 'ret' (lines '1,052'-'1,056').
1122	src/att/grappa/GrappaNexus.java	1052	Found 'DD'-anomaly for variable 'ret' (lines '1,052'-'1,061').
1123	src/att/grappa/GrappaNexus.java	1067	This statement may have some unnecessary parentheses
1124	src/att/grappa/GrappaNexus.java	1076	The method 'bboxCheckSet' has a Cyclomatic Complexity of 13.
1125	src/att/grappa/GrappaNexus.java	1077	Found 'DU'-anomaly for variable 'oldbox' (lines '1,077'-'1,117').
1126	src/att/grappa/GrappaNexus.java	1079	Found 'DD'-anomaly for variable 'newbox' (lines '1,079'-'1,081').
1127	src/att/grappa/GrappaNexus.java	1081	Found 'DU'-anomaly for variable 'newbox' (lines '1,081'-'1,117').
1128	src/att/grappa/GrappaNexus.java	1132	clone() method should throw CloneNotSupportedException
1129	src/att/grappa/GrappaNexus.java	1156	New exception is thrown in catch block, original stack trace may be lost
1130	src/att/grappa/GrappaNexus.java	1168	Found 'DD'-anomaly for variable 'contains' (lines '1,168'-'1,171').
1131	src/att/grappa/GrappaNexus.java	1188	This statement may have some unnecessary parentheses
1132	src/att/grappa/GrappaNexus.java	1193	Found 'DD'-anomaly for variable 'contains' (lines '1,193'-'1,196').
1133	src/att/grappa/GrappaNexus.java	1213	This statement may have some unnecessary parentheses
1134	src/att/grappa/GrappaNexus.java	1218	This statement may have some unnecessary parentheses
1135	src/att/grappa/GrappaNexus.java	1223	This statement may have some unnecessary parentheses
1136	src/att/grappa/GrappaNexus.java	1311	Found 'DD'-anomaly for variable 'intersects' (lines '1,311'-'1,314').
1137	src/att/grappa/GrappaNexus.java	1353	Avoid really long methods.
1138	src/att/grappa/GrappaNexus.java	1353	Avoid reassigning parameters such as 'arg'
1139	src/att/grappa/GrappaNexus.java	1353	Avoid reassigning parameters such as 'obs'
1140	src/att/grappa/GrappaNexus.java	1353	The method update() has an NPath complexity of 2920
1141	src/att/grappa/GrappaNexus.java	1359	Found 'DU'-anomaly for variable 'attr' (lines '1,359'-'1,558').
1142	src/att/grappa/GrappaNexus.java	1384	Found 'DU'-anomaly for variable 'attrName' (lines '1,384'-'1,558').
1143	src/att/grappa/GrappaNexus.java	1385	Found 'DU'-anomaly for variable 'attrHash' (lines '1,385'-'1,558').
1144	src/att/grappa/GrappaNexus.java	1386	Found 'DU'-anomaly for variable 'thisUpdate' (lines '1,386'-'1,558').
1145	src/att/grappa/GrappaNexus.java	1393	A high ratio of statements to labels in a switch statement. Consider refactoring.
1146	src/att/grappa/GrappaNexus.java	1393	Switch statements should have a default label
1147	src/att/grappa/GrappaPanel.java	11	A high number of imports can indicate a high degree of coupling within an object.
1148	src/att/grappa/GrappaPanel.java	53	Avoid really long classes.
1149	src/att/grappa/GrappaPanel.java	53	The class 'GrappaPanel' has a Cyclomatic Complexity of 5 (Highest = 65).
1150	src/att/grappa/GrappaPanel.java	53	Too many fields
1151	src/att/grappa/GrappaPanel.java	60	To be compliant to J2EE, a webapp should not use any thread.
1152	src/att/grappa/GrappaPanel.java	62	This class has too many methods, consider refactoring it.
1153	src/att/grappa/GrappaPanel.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
1154	src/att/grappa/GrappaPanel.java	63	Use explicit scoping instead of the default package private level
1155	src/att/grappa/GrappaPanel.java	64	Found non-transient, non-static member. Please mark as transient or provide accessors.
1156	src/att/grappa/GrappaPanel.java	64	Use explicit scoping instead of the default package private level
1157	src/att/grappa/GrappaPanel.java	65	Found non-transient, non-static member. Please mark as transient or provide accessors.
1158	src/att/grappa/GrappaPanel.java	65	Use explicit scoping instead of the default package private level
1159	src/att/grappa/GrappaPanel.java	66	Found non-transient, non-static member. Please mark as transient or provide accessors.
1160	src/att/grappa/GrappaPanel.java	66	Found non-transient, non-static member. Please mark as transient or provide accessors.
1161	src/att/grappa/GrappaPanel.java	66	Use explicit scoping instead of the default package private level
1162	src/att/grappa/GrappaPanel.java	67	Use explicit scoping instead of the default package private level
1163	src/att/grappa/GrappaPanel.java	70	Avoid using implementation types like 'Vector'; use the interface instead
1164	src/att/grappa/GrappaPanel.java	70	Avoid using implementation types like 'Vector'; use the interface instead
1165	src/att/grappa/GrappaPanel.java	70	Consider replacing this Vector with the newer java.util.List
1166	src/att/grappa/GrappaPanel.java	88	Avoid unused private fields such as 'paintActive'.
1167	src/att/grappa/GrappaPanel.java	88	Private field 'paintActive' could be made final; it is only initialized in the declaration or constructor.
1168	src/att/grappa/GrappaPanel.java	100	Parameter 'subgraph' is not assigned and could be declared final
1169	src/att/grappa/GrappaPanel.java	110	Parameter 'backer' is not assigned and could be declared final
1170	src/att/grappa/GrappaPanel.java	110	Parameter 'subgraph' is not assigned and could be declared final
1171	src/att/grappa/GrappaPanel.java	131	Parameter 'listener' is not assigned and could be declared final
1172	src/att/grappa/GrappaPanel.java	132	Local variable 'oldGL' could be declared final
1173	src/att/grappa/GrappaPanel.java	151	This statement may have some unnecessary parentheses
1174	src/att/grappa/GrappaPanel.java	161	This statement may have some unnecessary parentheses
1175	src/att/grappa/GrappaPanel.java	164	Avoid variables with short names like g
1176	src/att/grappa/GrappaPanel.java	164	Avoid variables with short names like pf
1177	src/att/grappa/GrappaPanel.java	164	Avoid variables with short names like pi
1178	src/att/grappa/GrappaPanel.java	164	Parameter 'g' is not assigned and could be declared final
1179	src/att/grappa/GrappaPanel.java	167	Found 'DU'-anomaly for variable 'prevToSize' (lines '167'-'184').
1180	src/att/grappa/GrappaPanel.java	167	Local variable 'prevToSize' could be declared final
1181	src/att/grappa/GrappaPanel.java	168	Found 'DU'-anomaly for variable 'prevToFit' (lines '168'-'184').
1182	src/att/grappa/GrappaPanel.java	168	Local variable 'prevToFit' could be declared final
1183	src/att/grappa/GrappaPanel.java	171	A method should have only one exit point, and that should be the last statement in the method
1184	src/att/grappa/GrappaPanel.java	187	Avoid variables with short names like g
1185	src/att/grappa/GrappaPanel.java	188	Found 'DD'-anomaly for variable 'cpt' (lines '188'-'192').
1186	src/att/grappa/GrappaPanel.java	188	Found 'DD'-anomaly for variable 'cpt' (lines '188'-'196').
1187	src/att/grappa/GrappaPanel.java	210	This statement may have some unnecessary parentheses
1188	src/att/grappa/GrappaPanel.java	213	Avoid really long methods.
1189	src/att/grappa/GrappaPanel.java	213	Avoid variables with short names like g
1190	src/att/grappa/GrappaPanel.java	213	The method 'componentPaint' has a Cyclomatic Complexity of 65.
1191	src/att/grappa/GrappaPanel.java	213	The method componentPaint() has an NCSS line count of 224
1192	src/att/grappa/GrappaPanel.java	213	The method componentPaint() has an NPath complexity of 105374208
1193	src/att/grappa/GrappaPanel.java	214	A method should have only one exit point, and that should be the last statement in the method
1194	src/att/grappa/GrappaPanel.java	214	Avoid using if statements without curly braces
1195	src/att/grappa/GrappaPanel.java	214	This statement may have some unnecessary parentheses
1196	src/att/grappa/GrappaPanel.java	215	Found 'DU'-anomaly for variable 'g2d' (lines '215'-'536').
1197	src/att/grappa/GrappaPanel.java	215	Local variable 'g2d' could be declared final
1198	src/att/grappa/GrappaPanel.java	216	Avoid unused local variables such as 'i'.
1199	src/att/grappa/GrappaPanel.java	216	Local variable 'i' could be declared final
1200	src/att/grappa/GrappaPanel.java	217	Avoid unused local variables such as 'thisPaint'.
1201	src/att/grappa/GrappaPanel.java	217	Found 'DU'-anomaly for variable 'thisPaint' (lines '217'-'536').
1202	src/att/grappa/GrappaPanel.java	222	Found 'DU'-anomaly for variable 'cpt' (lines '222'-'536').
1203	src/att/grappa/GrappaPanel.java	232	Assigning an Object to null is a code smell. Consider refactoring.
1204	src/att/grappa/GrappaPanel.java	236	A method should have only one exit point, and that should be the last statement in the method
1205	src/att/grappa/GrappaPanel.java	236	Avoid using if statements without curly braces
1206	src/att/grappa/GrappaPanel.java	236	This statement may have some unnecessary parentheses
1207	src/att/grappa/GrappaPanel.java	272	Assigning an Object to null is a code smell. Consider refactoring.
1208	src/att/grappa/GrappaPanel.java	273	Found 'DD'-anomaly for variable 'scaleToWidth' (lines '273'-'283').
1209	src/att/grappa/GrappaPanel.java	273	Found 'DD'-anomaly for variable 'scaleToWidth' (lines '273'-'287').
1210	src/att/grappa/GrappaPanel.java	274	Found 'DD'-anomaly for variable 'scaleToHeight' (lines '274'-'284').
1211	src/att/grappa/GrappaPanel.java	274	Found 'DD'-anomaly for variable 'scaleToHeight' (lines '274'-'288').
1212	src/att/grappa/GrappaPanel.java	276	Found 'DD'-anomaly for variable 'prnt' (lines '276'-'280').
1213	src/att/grappa/GrappaPanel.java	277	Avoid using while statements without curly braces
1214	src/att/grappa/GrappaPanel.java	279	Avoid using if statements without curly braces
1215	src/att/grappa/GrappaPanel.java	296	Found 'DD'-anomaly for variable 'xTranslate' (lines '296'-'299').
1216	src/att/grappa/GrappaPanel.java	296	Found 'DD'-anomaly for variable 'xTranslate' (lines '296'-'304').
1217	src/att/grappa/GrappaPanel.java	297	Found 'DD'-anomaly for variable 'yTranslate' (lines '297'-'300').
1218	src/att/grappa/GrappaPanel.java	297	Found 'DD'-anomaly for variable 'yTranslate' (lines '297'-'305').
1219	src/att/grappa/GrappaPanel.java	318	Avoid if (x != y) ..; else ..;
1220	src/att/grappa/GrappaPanel.java	322	Avoid using while statements without curly braces
1221	src/att/grappa/GrappaPanel.java	324	Avoid using if statements without curly braces
1222	src/att/grappa/GrappaPanel.java	330	Avoid using if...else statements without curly braces
1223	src/att/grappa/GrappaPanel.java	333	Avoid unused local variables such as 'zb'.
1224	src/att/grappa/GrappaPanel.java	341	Avoid unused local variables such as 'xTranslate'.
1225	src/att/grappa/GrappaPanel.java	342	Avoid unused local variables such as 'yTranslate'.
1226	src/att/grappa/GrappaPanel.java	362	Assigning an Object to null is a code smell. Consider refactoring.
1227	src/att/grappa/GrappaPanel.java	372	Avoid if (x != y) ..; else ..;
1228	src/att/grappa/GrappaPanel.java	375	Assigning an Object to null is a code smell. Consider refactoring.
1229	src/att/grappa/GrappaPanel.java	376	Assigning an Object to null is a code smell. Consider refactoring.
1230	src/att/grappa/GrappaPanel.java	380	Avoid using while statements without curly braces
1231	src/att/grappa/GrappaPanel.java	382	Avoid using if statements without curly braces
1232	src/att/grappa/GrappaPanel.java	418	Avoid using while statements without curly braces
1233	src/att/grappa/GrappaPanel.java	483	Found 'DD'-anomaly for variable 'bkgdColor' (lines '483'-'486').
1234	src/att/grappa/GrappaPanel.java	486	Found 'DD'-anomaly for variable 'bkgdColor' (lines '486'-'491').
1235	src/att/grappa/GrappaPanel.java	486	Found 'DD'-anomaly for variable 'bkgdColor' (lines '486'-'498').
1236	src/att/grappa/GrappaPanel.java	490	Avoid if (x != y) ..; else ..;
1237	src/att/grappa/GrappaPanel.java	493	Avoid if (x != y) ..; else ..;
1238	src/att/grappa/GrappaPanel.java	494	Avoid using if...else statements without curly braces
1239	src/att/grappa/GrappaPanel.java	496	Avoid using if...else statements without curly braces
1240	src/att/grappa/GrappaPanel.java	505	Avoid if (x != y) ..; else ..;
1241	src/att/grappa/GrappaPanel.java	551	Found 'DD'-anomaly for variable 'prnt' (lines '551'-'555').
1242	src/att/grappa/GrappaPanel.java	552	Avoid using while statements without curly braces
1243	src/att/grappa/GrappaPanel.java	590	Overriding method merely calls super
1244	src/att/grappa/GrappaPanel.java	604	A method should have only one exit point, and that should be the last statement in the method
1245	src/att/grappa/GrappaPanel.java	722	Avoid really long methods.
1246	src/att/grappa/GrappaPanel.java	722	Avoid reassigning parameters such as 'bkgdColor'
1247	src/att/grappa/GrappaPanel.java	722	Avoid reassigning parameters such as 'bkgdColor'
1248	src/att/grappa/GrappaPanel.java	722	The method 'paintSubgraph' has a Cyclomatic Complexity of 58.
1249	src/att/grappa/GrappaPanel.java	722	The method paintSubgraph() has an NCSS line count of 156
1250	src/att/grappa/GrappaPanel.java	722	The method paintSubgraph() has an NPath complexity of 96711315
1251	src/att/grappa/GrappaPanel.java	723	Use equals() to compare object references.
1252	src/att/grappa/GrappaPanel.java	730	Found 'DD'-anomaly for variable 'enm' (lines '730'-'792').
1253	src/att/grappa/GrappaPanel.java	734	Use equals() to compare object references.
1254	src/att/grappa/GrappaPanel.java	741	Avoid using if...else statements without curly braces
1255	src/att/grappa/GrappaPanel.java	743	Avoid using if...else statements without curly braces
1256	src/att/grappa/GrappaPanel.java	793	Found 'DD'-anomaly for variable 'subsubg' (lines '793'-'795').
1257	src/att/grappa/GrappaPanel.java	803	Avoid assignments in operands
1258	src/att/grappa/GrappaPanel.java	864	Avoid assignments in operands
1259	src/att/grappa/GrappaPanel.java	917	Found 'DD'-anomaly for variable 'stash' (lines '917'-'919').
1260	src/att/grappa/GrappaPanel.java	919	Found 'DD'-anomaly for variable 'stash' (lines '919'-'920').
1261	src/att/grappa/GrappaPanel.java	922	Avoid assignments in operands
1262	src/att/grappa/GrappaPanel.java	922	Found 'DD'-anomaly for variable 'elem' (lines '922'-'923').
1263	src/att/grappa/GrappaPanel.java	928	The method 'reallyFindContainingElement' has a Cyclomatic Complexity of 31.
1264	src/att/grappa/GrappaPanel.java	928	The method reallyFindContainingElement() has an NPath complexity of 112641
1265	src/att/grappa/GrappaPanel.java	934	Found 'DD'-anomaly for variable 'grappaNexus' (lines '934'-'944').
1266	src/att/grappa/GrappaPanel.java	944	Avoid assignments in operands
1267	src/att/grappa/GrappaPanel.java	946	These nested if statements could be combined
1268	src/att/grappa/GrappaPanel.java	948	A method should have only one exit point, and that should be the last statement in the method
1269	src/att/grappa/GrappaPanel.java	963	Avoid assignments in operands
1270	src/att/grappa/GrappaPanel.java	965	These nested if statements could be combined
1271	src/att/grappa/GrappaPanel.java	977	Found 'DD'-anomaly for variable 'subelem' (lines '977'-'981').
1272	src/att/grappa/GrappaPanel.java	977	Found 'DU'-anomaly for variable 'subelem' (lines '977'-'1,001').
1273	src/att/grappa/GrappaPanel.java	1201	A getX() method which returns a boolean should be named isX()
1274	src/att/grappa/GrappaPanel.java	1211	A getX() method which returns a boolean should be named isX()
1275	src/att/grappa/GrappaPathIterator.java	22	The class 'GrappaPathIterator' has a Cyclomatic Complexity of 3 (Highest = 10).
1276	src/att/grappa/GrappaPathIterator.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
1277	src/att/grappa/GrappaPathIterator.java	24	Use explicit scoping instead of the default package private level
1278	src/att/grappa/GrappaPathIterator.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
1279	src/att/grappa/GrappaPathIterator.java	25	Use explicit scoping instead of the default package private level
1280	src/att/grappa/GrappaPathIterator.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
1281	src/att/grappa/GrappaPathIterator.java	26	Use explicit scoping instead of the default package private level
1282	src/att/grappa/GrappaPathIterator.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
1283	src/att/grappa/GrappaPathIterator.java	27	Use explicit scoping instead of the default package private level
1284	src/att/grappa/GrappaPathIterator.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
1285	src/att/grappa/GrappaPathIterator.java	28	Use explicit scoping instead of the default package private level
1286	src/att/grappa/GrappaPathIterator.java	40	Parameter 'shape' is not assigned and could be declared final
1287	src/att/grappa/GrappaPathIterator.java	48	Avoid variables with short names like at
1288	src/att/grappa/GrappaPathIterator.java	48	Parameter 'at' is not assigned and could be declared final
1289	src/att/grappa/GrappaPathIterator.java	48	Parameter 'shape' is not assigned and could be declared final
1290	src/att/grappa/GrappaPathIterator.java	48	The constructor 'GrappaPathIterator' has a Cyclomatic Complexity of 10.
1291	src/att/grappa/GrappaPathIterator.java	57	Assigning an Object to null is a code smell. Consider refactoring.
1292	src/att/grappa/GrappaPathIterator.java	63	Assigning an Object to null is a code smell. Consider refactoring.
1293	src/att/grappa/GrappaPathIterator.java	66	Avoid if (x != y) ..; else ..;
1294	src/att/grappa/GrappaPathIterator.java	68	Avoid if (x != y) ..; else ..;
1295	src/att/grappa/GrappaPathIterator.java	71	Avoid throwing raw exception types.
1296	src/att/grappa/GrappaPathIterator.java	81	Parameter 'coords' is not assigned and could be declared final
1297	src/att/grappa/GrappaPathIterator.java	83	This statement may have some unnecessary parentheses
1298	src/att/grappa/GrappaPathIterator.java	93	This statement may have some unnecessary parentheses
1299	src/att/grappa/GrappaPathIterator.java	100	This statement may have some unnecessary parentheses
1300	src/att/grappa/GrappaPathIterator.java	114	Assigning an Object to null is a code smell. Consider refactoring.
1301	src/att/grappa/GrappaPathIterator.java	118	Assigning an Object to null is a code smell. Consider refactoring.
1302	src/att/grappa/GrappaPathIterator.java	122	A method should have only one exit point, and that should be the last statement in the method
1303	src/att/grappa/GrappaPathIterator.java	127	Assigning an Object to null is a code smell. Consider refactoring.
1304	src/att/grappa/GrappaPoint.java	26	Document empty constructor
1305	src/att/grappa/GrappaPoint.java	26	It is a good practice to call super() in a constructor
1306	src/att/grappa/GrappaPoint.java	35	Avoid variables with short names like x
1307	src/att/grappa/GrappaPoint.java	35	Avoid variables with short names like y
1308	src/att/grappa/GrappaPoint.java	35	It is a good practice to call super() in a constructor
1309	src/att/grappa/GrappaPoint.java	35	Parameter 'x' is not assigned and could be declared final
1310	src/att/grappa/GrappaPoint.java	35	Parameter 'y' is not assigned and could be declared final
1311	src/att/grappa/GrappaPoint.java	47	It is a good practice to call super() in a constructor
1312	src/att/grappa/GrappaPoint.java	47	Parameter 'coordString' is not assigned and could be declared final
1313	src/att/grappa/GrappaPoint.java	53	New exception is thrown in catch block, original stack trace may be lost
1314	src/att/grappa/GrappaPoint.java	69	This statement may have some unnecessary parentheses
1315	src/att/grappa/GrappaPoint.java	78	Parameter 'format' is not assigned and could be declared final
1316	src/att/grappa/GrappaPoint.java	79	This statement may have some unnecessary parentheses
1317	src/att/grappa/GrappaShape.java	29	The class 'GrappaShape' has a Cyclomatic Complexity of 9 (Highest = 107).
1318	src/att/grappa/GrappaShape.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
1319	src/att/grappa/GrappaShape.java	71	Avoid really long parameter lists.
1320	src/att/grappa/GrappaShape.java	71	Avoid reassigning parameters such as 'diagonalsArg'
1321	src/att/grappa/GrappaShape.java	71	Avoid reassigning parameters such as 'distortionArg'
1322	src/att/grappa/GrappaShape.java	71	Avoid reassigning parameters such as 'extra'
1323	src/att/grappa/GrappaShape.java	71	Avoid reassigning parameters such as 'height'
1324	src/att/grappa/GrappaShape.java	71	Avoid reassigning parameters such as 'height'
1325	src/att/grappa/GrappaShape.java	71	Avoid variables with short names like x
1326	src/att/grappa/GrappaShape.java	71	Avoid variables with short names like y
1327	src/att/grappa/GrappaShape.java	71	The constructor 'GrappaShape' has a Cyclomatic Complexity of 107.
1328	src/att/grappa/GrappaShape.java	71	The constructor with 13 parameters has an NCSS line count of 364
1329	src/att/grappa/GrappaShape.java	86	Avoid variables with short names like i
1330	src/att/grappa/GrappaShape.java	90	The default label should be the last label in a switch statement
1331	src/att/grappa/GrappaShape.java	189	Assigning an Object to null is a code smell. Consider refactoring.
1332	src/att/grappa/GrappaShape.java	195	Avoid if (x != y) ..; else ..;
1333	src/att/grappa/GrappaShape.java	196	Avoid if (x != y) ..; else ..;
1334	src/att/grappa/GrappaShape.java	197	Avoid if (x != y) ..; else ..;
1335	src/att/grappa/GrappaShape.java	215	No need to check for null before an instanceof
1336	src/att/grappa/GrappaShape.java	227	Avoid using if statements without curly braces
1337	src/att/grappa/GrappaShape.java	229	Avoid using if statements without curly braces
1338	src/att/grappa/GrappaShape.java	231	Avoid using if statements without curly braces
1339	src/att/grappa/GrappaShape.java	233	Avoid using if statements without curly braces
1340	src/att/grappa/GrappaShape.java	235	Avoid using if statements without curly braces
1341	src/att/grappa/GrappaShape.java	243	Assigning an Object to null is a code smell. Consider refactoring.
1342	src/att/grappa/GrappaShape.java	255	Local variable 'sectorAngle' could be declared final
1343	src/att/grappa/GrappaShape.java	256	Local variable 'sideLength' could be declared final
1344	src/att/grappa/GrappaShape.java	271	Local variable 'Bpt' could be declared final
1345	src/att/grappa/GrappaShape.java	425	Avoid instantiating new objects inside loops
1346	src/att/grappa/GrappaShape.java	430	Avoid instantiating new objects inside loops
1347	src/att/grappa/GrappaShape.java	435	Avoid instantiating new objects inside loops
1348	src/att/grappa/GrappaShape.java	441	Avoid instantiating new objects inside loops
1349	src/att/grappa/GrappaShape.java	523	These nested if statements could be combined
1350	src/att/grappa/GrappaShape.java	571	clone() method should throw CloneNotSupportedException
1351	src/att/grappa/GrappaShape.java	573	Local variable 'copy' could be declared final
1352	src/att/grappa/GrappaShape.java	578	New exception is thrown in catch block, original stack trace may be lost
1353	src/att/grappa/GrappaShape.java	588	Avoid variables with short names like x
1354	src/att/grappa/GrappaShape.java	588	Avoid variables with short names like y
1355	src/att/grappa/GrappaShape.java	588	Parameter 'x' is not assigned and could be declared final
1356	src/att/grappa/GrappaShape.java	588	Parameter 'y' is not assigned and could be declared final
1357	src/att/grappa/GrappaShape.java	589	This statement may have some unnecessary parentheses
1358	src/att/grappa/GrappaShape.java	592	Parameter 'height' is not assigned and could be declared final
1359	src/att/grappa/GrappaShape.java	592	Parameter 'width' is not assigned and could be declared final
1360	src/att/grappa/GrappaShape.java	592	Parameter 'x' is not assigned and could be declared final
1361	src/att/grappa/GrappaShape.java	593	This statement may have some unnecessary parentheses
1362	src/att/grappa/GrappaShape.java	597	This statement may have some unnecessary parentheses
1363	src/att/grappa/GrappaShape.java	601	This statement may have some unnecessary parentheses
1364	src/att/grappa/GrappaShape.java	605	This statement may have some unnecessary parentheses
1365	src/att/grappa/GrappaSize.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
1366	src/att/grappa/GrappaSize.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
1367	src/att/grappa/GrappaSize.java	36	Document empty constructor
1368	src/att/grappa/GrappaSize.java	36	It is a good practice to call super() in a constructor
1369	src/att/grappa/GrappaSize.java	45	It is a good practice to call super() in a constructor
1370	src/att/grappa/GrappaSize.java	45	Parameter 'height' is not assigned and could be declared final
1371	src/att/grappa/GrappaSize.java	45	Parameter 'width' is not assigned and could be declared final
1372	src/att/grappa/GrappaSize.java	57	It is a good practice to call super() in a constructor
1373	src/att/grappa/GrappaSize.java	57	Parameter 'dimenString' is not assigned and could be declared final
1374	src/att/grappa/GrappaSize.java	63	New exception is thrown in catch block, original stack trace may be lost
1375	src/att/grappa/GrappaSize.java	89	Avoid variables with short names like d
1376	src/att/grappa/GrappaSize.java	89	Parameter 'd' is not assigned and could be declared final
1377	src/att/grappa/GrappaSize.java	96	Parameter 'height' is not assigned and could be declared final
1378	src/att/grappa/GrappaSize.java	108	This statement may have some unnecessary parentheses
1379	src/att/grappa/GrappaSize.java	118	This statement may have some unnecessary parentheses
1380	src/att/grappa/GrappaStyle.java	24	Avoid really long classes.
1381	src/att/grappa/GrappaStyle.java	24	The class 'GrappaStyle' has a Cyclomatic Complexity of 8 (Highest = 70).
1382	src/att/grappa/GrappaStyle.java	24	Too many fields
1383	src/att/grappa/GrappaStyle.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
1384	src/att/grappa/GrappaStyle.java	30	Private field 'elementType' could be made final; it is only initialized in the declaration or constructor.
1385	src/att/grappa/GrappaStyle.java	36	Avoid excessively long variable names like DEFAULT_SET_STRING
1386	src/att/grappa/GrappaStyle.java	132	Avoid excessively long variable names like STYLE_LINE_COLOR_DEFAULT
1387	src/att/grappa/GrappaStyle.java	136	Avoid excessively long variable names like STYLE_LINE_STYLE_DEFAULT
1388	src/att/grappa/GrappaStyle.java	140	Avoid excessively long variable names like STYLE_LINE_WIDTH_DEFAULT
1389	src/att/grappa/GrappaStyle.java	148	Avoid excessively long variable names like STYLE_JOIN_DEFAULT
1390	src/att/grappa/GrappaStyle.java	182	Use explicit scoping instead of the default package private level
1391	src/att/grappa/GrappaStyle.java	184	Use explicit scoping instead of the default package private level
1392	src/att/grappa/GrappaStyle.java	186	Consider replacing this Hashtable with the newer java.util.Map
1393	src/att/grappa/GrappaStyle.java	188	Consider replacing this Hashtable with the newer java.util.Map
1394	src/att/grappa/GrappaStyle.java	191	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1395	src/att/grappa/GrappaStyle.java	192	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1396	src/att/grappa/GrappaStyle.java	193	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1397	src/att/grappa/GrappaStyle.java	194	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1398	src/att/grappa/GrappaStyle.java	195	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1399	src/att/grappa/GrappaStyle.java	234	Found non-transient, non-static member. Please mark as transient or provide accessors.
1400	src/att/grappa/GrappaStyle.java	234	Use explicit scoping instead of the default package private level
1401	src/att/grappa/GrappaStyle.java	234	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1402	src/att/grappa/GrappaStyle.java	235	Found non-transient, non-static member. Please mark as transient or provide accessors.
1403	src/att/grappa/GrappaStyle.java	235	Use explicit scoping instead of the default package private level
1404	src/att/grappa/GrappaStyle.java	235	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1405	src/att/grappa/GrappaStyle.java	236	Found non-transient, non-static member. Please mark as transient or provide accessors.
1406	src/att/grappa/GrappaStyle.java	236	Use explicit scoping instead of the default package private level
1407	src/att/grappa/GrappaStyle.java	236	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1408	src/att/grappa/GrappaStyle.java	237	Found non-transient, non-static member. Please mark as transient or provide accessors.
1409	src/att/grappa/GrappaStyle.java	239	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1410	src/att/grappa/GrappaStyle.java	241	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1411	src/att/grappa/GrappaStyle.java	265	Parameter 'style' is not assigned and could be declared final
1412	src/att/grappa/GrappaStyle.java	265	Parameter 'type' is not assigned and could be declared final
1413	src/att/grappa/GrappaStyle.java	267	Avoid throwing raw exception types.
1414	src/att/grappa/GrappaStyle.java	270	Overridable method 'updateStyle' called during object construction
1415	src/att/grappa/GrappaStyle.java	284	Avoid really long methods.
1416	src/att/grappa/GrappaStyle.java	284	Parameter 'style' is not assigned and could be declared final
1417	src/att/grappa/GrappaStyle.java	284	The method 'updateStyle' has a Cyclomatic Complexity of 65.
1418	src/att/grappa/GrappaStyle.java	284	The method updateStyle() has an NCSS line count of 218
1419	src/att/grappa/GrappaStyle.java	284	The method updateStyle() has an NPath complexity of 221784
1420	src/att/grappa/GrappaStyle.java	293	An empty statement (semicolon) not part of a loop
1421	src/att/grappa/GrappaStyle.java	300	Assigning an Object to null is a code smell. Consider refactoring.
1422	src/att/grappa/GrappaStyle.java	302	A method should have only one exit point, and that should be the last statement in the method
1423	src/att/grappa/GrappaStyle.java	302	Avoid using if statements without curly braces
1424	src/att/grappa/GrappaStyle.java	304	Local variable 'len' could be declared final
1425	src/att/grappa/GrappaStyle.java	305	Avoid using if statements without curly braces
1426	src/att/grappa/GrappaStyle.java	307	Found 'DD'-anomaly for variable 'option_string' (lines '307'-'360').
1427	src/att/grappa/GrappaStyle.java	307	Found 'DU'-anomaly for variable 'option_string' (lines '307'-'523').
1428	src/att/grappa/GrappaStyle.java	308	Found 'DD'-anomaly for variable 'option_obj' (lines '308'-'430').
1429	src/att/grappa/GrappaStyle.java	308	Found 'DU'-anomaly for variable 'option_obj' (lines '308'-'523').
1430	src/att/grappa/GrappaStyle.java	309	Found 'DD'-anomaly for variable 'option' (lines '309'-'434').
1431	src/att/grappa/GrappaStyle.java	309	Found 'DU'-anomaly for variable 'option' (lines '309'-'523').
1432	src/att/grappa/GrappaStyle.java	310	Found 'DU'-anomaly for variable 'last_option' (lines '310'-'523').
1433	src/att/grappa/GrappaStyle.java	312	Found 'DD'-anomaly for variable 'keyword_ok' (lines '312'-'330').
1434	src/att/grappa/GrappaStyle.java	312	Found 'DU'-anomaly for variable 'keyword_ok' (lines '312'-'523').
1435	src/att/grappa/GrappaStyle.java	313	Found 'DU'-anomaly for variable 'parens_ok' (lines '313'-'523').
1436	src/att/grappa/GrappaStyle.java	314	Avoid variables with short names like i
1437	src/att/grappa/GrappaStyle.java	314	Found 'DD'-anomaly for variable 'offset' (lines '314'-'349').
1438	src/att/grappa/GrappaStyle.java	314	Found 'DU'-anomaly for variable 'offset' (lines '314'-'523').
1439	src/att/grappa/GrappaStyle.java	315	Avoid variables with short names like c
1440	src/att/grappa/GrappaStyle.java	318	Avoid using if statements without curly braces
1441	src/att/grappa/GrappaStyle.java	321	Avoid throwing raw exception types.
1442	src/att/grappa/GrappaStyle.java	324	Avoid throwing raw exception types.
1443	src/att/grappa/GrappaStyle.java	327	Avoid throwing raw exception types.
1444	src/att/grappa/GrappaStyle.java	327	The String literal "style attribute (" appears 5 times in this file; the first occurrence is on line 327
1445	src/att/grappa/GrappaStyle.java	329	Found 'DU'-anomaly for variable 'in_parens' (lines '329'-'523').
1446	src/att/grappa/GrappaStyle.java	330	Found 'DD'-anomaly for variable 'keyword_ok' (lines '330'-'330').
1447	src/att/grappa/GrappaStyle.java	330	Found 'DD'-anomaly for variable 'keyword_ok' (lines '330'-'337').
1448	src/att/grappa/GrappaStyle.java	330	Found 'DD'-anomaly for variable 'keyword_ok' (lines '330'-'343').
1449	src/att/grappa/GrappaStyle.java	330	Found 'DU'-anomaly for variable 'keyword_ok' (lines '330'-'523').
1450	src/att/grappa/GrappaStyle.java	331	Found 'DD'-anomaly for variable 'parens_ok' (lines '331'-'338').
1451	src/att/grappa/GrappaStyle.java	331	Found 'DD'-anomaly for variable 'parens_ok' (lines '331'-'344').
1452	src/att/grappa/GrappaStyle.java	331	Found 'DD'-anomaly for variable 'parens_ok' (lines '331'-'510').
1453	src/att/grappa/GrappaStyle.java	331	Found 'DU'-anomaly for variable 'parens_ok' (lines '331'-'523').
1454	src/att/grappa/GrappaStyle.java	334	Avoid throwing raw exception types.
1455	src/att/grappa/GrappaStyle.java	337	Found 'DU'-anomaly for variable 'keyword_ok' (lines '337'-'523').
1456	src/att/grappa/GrappaStyle.java	338	Found 'DU'-anomaly for variable 'parens_ok' (lines '338'-'523').
1457	src/att/grappa/GrappaStyle.java	343	Found 'DU'-anomaly for variable 'keyword_ok' (lines '343'-'523').
1458	src/att/grappa/GrappaStyle.java	344	Found 'DU'-anomaly for variable 'parens_ok' (lines '344'-'523').
1459	src/att/grappa/GrappaStyle.java	352	Avoid assignments in operands
1460	src/att/grappa/GrappaStyle.java	352	Found 'DU'-anomaly for variable 'c' (lines '352'-'523').
1461	src/att/grappa/GrappaStyle.java	353	Avoid using if...else statements without curly braces
1462	src/att/grappa/GrappaStyle.java	354	Avoid using if statements without curly braces
1463	src/att/grappa/GrappaStyle.java	358	Avoid assignments in operands
1464	src/att/grappa/GrappaStyle.java	358	Avoid using while statements without curly braces
1465	src/att/grappa/GrappaStyle.java	371	New exception is thrown in catch block, original stack trace may be lost
1466	src/att/grappa/GrappaStyle.java	376	Unnecessary wrapper object creation
1467	src/att/grappa/GrappaStyle.java	378	New exception is thrown in catch block, original stack trace may be lost
1468	src/att/grappa/GrappaStyle.java	383	Unnecessary wrapper object creation
1469	src/att/grappa/GrappaStyle.java	385	New exception is thrown in catch block, original stack trace may be lost
1470	src/att/grappa/GrappaStyle.java	390	Unnecessary wrapper object creation
1471	src/att/grappa/GrappaStyle.java	392	New exception is thrown in catch block, original stack trace may be lost
1472	src/att/grappa/GrappaStyle.java	399	Unnecessary wrapper object creation
1473	src/att/grappa/GrappaStyle.java	402	Unnecessary wrapper object creation
1474	src/att/grappa/GrappaStyle.java	428	Found 'DU'-anomaly for variable 'last_option' (lines '428'-'523').
1475	src/att/grappa/GrappaStyle.java	430	When doing a String.toLowerCase()/toUpperCase() call, use a Locale
1476	src/att/grappa/GrappaStyle.java	431	No need to check for null before an instanceof
1477	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'454').
1478	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'458').
1479	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'462').
1480	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'466').
1481	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'488').
1482	src/att/grappa/GrappaStyle.java	436	Found 'DD'-anomaly for variable 'last_option' (lines '436'-'505').
1483	src/att/grappa/GrappaStyle.java	436	Found 'DU'-anomaly for variable 'last_option' (lines '436'-'523').
1484	src/att/grappa/GrappaStyle.java	440	Assigning an Object to null is a code smell. Consider refactoring.
1485	src/att/grappa/GrappaStyle.java	445	Avoid instantiating new objects inside loops
1486	src/att/grappa/GrappaStyle.java	450	Avoid instantiating new objects inside loops
1487	src/att/grappa/GrappaStyle.java	492	Avoid instantiating new objects inside loops
1488	src/att/grappa/GrappaStyle.java	495	Avoid instantiating new objects inside loops
1489	src/att/grappa/GrappaStyle.java	498	Avoid instantiating new objects inside loops
1490	src/att/grappa/GrappaStyle.java	510	Avoid using if statements without curly braces
1491	src/att/grappa/GrappaStyle.java	510	Found 'DU'-anomaly for variable 'parens_ok' (lines '510'-'523').
1492	src/att/grappa/GrappaStyle.java	518	Local variable 'strokeString' could be declared final
1493	src/att/grappa/GrappaStyle.java	519	Avoid assignments in operands
1494	src/att/grappa/GrappaStyle.java	526	Parameter 'lineWidth' is not assigned and could be declared final
1495	src/att/grappa/GrappaStyle.java	527	Parameter 'capType' is not assigned and could be declared final
1496	src/att/grappa/GrappaStyle.java	534	Local variable 'strokeStringBuffer' could be declared final
1497	src/att/grappa/GrappaStyle.java	537	Avoid appending characters as strings in StringBuffer.append.
1498	src/att/grappa/GrappaStyle.java	539	Avoid appending characters as strings in StringBuffer.append.
1499	src/att/grappa/GrappaStyle.java	541	Avoid appending characters as strings in StringBuffer.append.
1500	src/att/grappa/GrappaStyle.java	543	Avoid appending characters as strings in StringBuffer.append.
1501	src/att/grappa/GrappaStyle.java	547	Avoid appending characters as strings in StringBuffer.append.
1502	src/att/grappa/GrappaStyle.java	558	This statement may have some unnecessary parentheses
1503	src/att/grappa/GrappaStyle.java	568	This statement may have some unnecessary parentheses
1504	src/att/grappa/GrappaStyle.java	577	This statement may have some unnecessary parentheses
1505	src/att/grappa/GrappaStyle.java	580	Avoid really long methods.
1506	src/att/grappa/GrappaStyle.java	580	Avoid really long parameter lists.
1507	src/att/grappa/GrappaStyle.java	580	The method 'generateStyleString' has a Cyclomatic Complexity of 70.
1508	src/att/grappa/GrappaStyle.java	580	The method generateStyleString() has an NCSS line count of 169
1509	src/att/grappa/GrappaStyle.java	599	Found 'DD'-anomaly for variable 'tmpstr' (lines '599'-'619').
1510	src/att/grappa/GrappaStyle.java	600	Found 'DD'-anomaly for variable 'args' (lines '600'-'687').
1511	src/att/grappa/GrappaStyle.java	606	Use equals() to compare object references.
1512	src/att/grappa/GrappaStyle.java	619	Avoid assignments in operands
1513	src/att/grappa/GrappaStyle.java	619	Found 'DD'-anomaly for variable 'tmpstr' (lines '619'-'911').
1514	src/att/grappa/GrappaStyle.java	619	Found 'DD'-anomaly for variable 'tmpstr' (lines '619'-'913').
1515	src/att/grappa/GrappaStyle.java	620	Local variable 'hsb' could be declared final
1516	src/att/grappa/GrappaStyle.java	916	This statement may have some unnecessary parentheses
1517	src/att/grappa/GrappaStyle.java	980	A method should have only one exit point, and that should be the last statement in the method
1518	src/att/grappa/GrappaStyle.java	980	This statement may have some unnecessary parentheses
1519	src/att/grappa/GrappaStyle.java	999	A getX() method which returns a boolean should be named isX()
1520	src/att/grappa/GrappaStyle.java	1008	A getX() method which returns a boolean should be named isX()
1521	src/att/grappa/GrappaStyle.java	1017	A getX() method which returns a boolean should be named isX()
1522	src/att/grappa/GrappaStyle.java	1026	A getX() method which returns a boolean should be named isX()
1523	src/att/grappa/GrappaStyle.java	1035	A getX() method which returns a boolean should be named isX()
1524	src/att/grappa/GrappaStyle.java	1048	A method should have only one exit point, and that should be the last statement in the method
1525	src/att/grappa/GrappaStyle.java	1065	clone() method should throw CloneNotSupportedException
1526	src/att/grappa/GrappaStyle.java	1067	Local variable 'copy' could be declared final
1527	src/att/grappa/GrappaStyle.java	1072	New exception is thrown in catch block, original stack trace may be lost
1528	src/att/grappa/GrappaSupport.java	38	Abstract classes should be named AbstractXXX
1529	src/att/grappa/GrappaSupport.java	38	The class 'GrappaSupport' has a Cyclomatic Complexity of 4 (Highest = 21).
1530	src/att/grappa/GrappaSupport.java	42	This class has too many methods, consider refactoring it.
1531	src/att/grappa/GrappaSupport.java	51	Avoid variables with short names like CN
1532	src/att/grappa/GrappaSupport.java	51	Do not use the short type
1533	src/att/grappa/GrappaSupport.java	52	Avoid variables with short names like WS
1534	src/att/grappa/GrappaSupport.java	52	Do not use the short type
1535	src/att/grappa/GrappaSupport.java	53	Avoid variables with short names like SP
1536	src/att/grappa/GrappaSupport.java	53	Do not use the short type
1537	src/att/grappa/GrappaSupport.java	54	Avoid variables with short names like PU
1538	src/att/grappa/GrappaSupport.java	54	Do not use the short type
1539	src/att/grappa/GrappaSupport.java	55	Avoid variables with short names like DG
1540	src/att/grappa/GrappaSupport.java	55	Do not use the short type
1541	src/att/grappa/GrappaSupport.java	61	Variables that are final and static should be in all caps.
1542	src/att/grappa/GrappaSupport.java	84	This statement may have some unnecessary parentheses
1543	src/att/grappa/GrappaSupport.java	99	Use explicit scoping instead of the default package private level
1544	src/att/grappa/GrappaSupport.java	100	Parameter 'ch' is not assigned and could be declared final
1545	src/att/grappa/GrappaSupport.java	110	Use explicit scoping instead of the default package private level
1546	src/att/grappa/GrappaSupport.java	111	Parameter 'ch' is not assigned and could be declared final
1547	src/att/grappa/GrappaSupport.java	121	Use explicit scoping instead of the default package private level
1548	src/att/grappa/GrappaSupport.java	122	Parameter 'ch' is not assigned and could be declared final
1549	src/att/grappa/GrappaSupport.java	132	Use explicit scoping instead of the default package private level
1550	src/att/grappa/GrappaSupport.java	133	Parameter 'ch' is not assigned and could be declared final
1551	src/att/grappa/GrappaSupport.java	143	Use explicit scoping instead of the default package private level
1552	src/att/grappa/GrappaSupport.java	144	Parameter 'ch' is not assigned and could be declared final
1553	src/att/grappa/GrappaSupport.java	264	Avoid using if statements without curly braces
1554	src/att/grappa/GrappaSupport.java	266	Local variable 'st' could be declared final
1555	src/att/grappa/GrappaSupport.java	268	Found 'DD'-anomaly for variable 'array' (lines '268'-'272').
1556	src/att/grappa/GrappaSupport.java	270	Found 'DU'-anomaly for variable 'i' (lines '270'-'276').
1557	src/att/grappa/GrappaSupport.java	272	Found 'DD'-anomaly for variable 'array' (lines '272'-'272').
1558	src/att/grappa/GrappaSupport.java	283	Avoid using if statements without curly braces
1559	src/att/grappa/GrappaSupport.java	285	Local variable 'st' could be declared final
1560	src/att/grappa/GrappaSupport.java	287	Found 'DD'-anomaly for variable 'array' (lines '287'-'291').
1561	src/att/grappa/GrappaSupport.java	289	Found 'DU'-anomaly for variable 'i' (lines '289'-'296').
1562	src/att/grappa/GrappaSupport.java	291	Found 'DD'-anomaly for variable 'array' (lines '291'-'291').
1563	src/att/grappa/GrappaSupport.java	291	Unnecessary wrapper object creation
1564	src/att/grappa/GrappaSupport.java	303	Avoid using if statements without curly braces
1565	src/att/grappa/GrappaSupport.java	305	Local variable 'st' could be declared final
1566	src/att/grappa/GrappaSupport.java	307	Found 'DD'-anomaly for variable 'array' (lines '307'-'311').
1567	src/att/grappa/GrappaSupport.java	309	Found 'DU'-anomaly for variable 'i' (lines '309'-'316').
1568	src/att/grappa/GrappaSupport.java	311	Found 'DD'-anomaly for variable 'array' (lines '311'-'311').
1569	src/att/grappa/GrappaSupport.java	311	Unnecessary wrapper object creation
1570	src/att/grappa/GrappaSupport.java	335	Local variable 'dir' could be declared final
1571	src/att/grappa/GrappaSupport.java	336	Position literals first in String comparisons
1572	src/att/grappa/GrappaSupport.java	337	A method should have only one exit point, and that should be the last statement in the method
1573	src/att/grappa/GrappaSupport.java	338	Position literals first in String comparisons
1574	src/att/grappa/GrappaSupport.java	339	A method should have only one exit point, and that should be the last statement in the method
1575	src/att/grappa/GrappaSupport.java	340	Position literals first in String comparisons
1576	src/att/grappa/GrappaSupport.java	341	A method should have only one exit point, and that should be the last statement in the method
1577	src/att/grappa/GrappaSupport.java	358	Found 'DD'-anomaly for variable 'retstr' (lines '358'-'361').
1578	src/att/grappa/GrappaSupport.java	358	Found 'DD'-anomaly for variable 'retstr' (lines '358'-'363').
1579	src/att/grappa/GrappaSupport.java	358	Found 'DD'-anomaly for variable 'retstr' (lines '358'-'365').
1580	src/att/grappa/GrappaSupport.java	358	Found 'DD'-anomaly for variable 'retstr' (lines '358'-'367').
1581	src/att/grappa/GrappaSupport.java	387	Local variable 'style' could be declared final
1582	src/att/grappa/GrappaSupport.java	388	Position literals first in String comparisons
1583	src/att/grappa/GrappaSupport.java	389	A method should have only one exit point, and that should be the last statement in the method
1584	src/att/grappa/GrappaSupport.java	390	Position literals first in String comparisons
1585	src/att/grappa/GrappaSupport.java	391	A method should have only one exit point, and that should be the last statement in the method
1586	src/att/grappa/GrappaSupport.java	409	Found 'DD'-anomaly for variable 'retstr' (lines '409'-'412').
1587	src/att/grappa/GrappaSupport.java	409	Found 'DD'-anomaly for variable 'retstr' (lines '409'-'414').
1588	src/att/grappa/GrappaSupport.java	409	Found 'DD'-anomaly for variable 'retstr' (lines '409'-'416').
1589	src/att/grappa/GrappaSupport.java	409	Found 'DD'-anomaly for variable 'retstr' (lines '409'-'418').
1590	src/att/grappa/GrappaSupport.java	433	Avoid using if statements without curly braces
1591	src/att/grappa/GrappaSupport.java	442	Avoid using if statements without curly braces
1592	src/att/grappa/GrappaSupport.java	442	This statement may have some unnecessary parentheses
1593	src/att/grappa/GrappaSupport.java	457	This statement may have some unnecessary parentheses
1594	src/att/grappa/GrappaSupport.java	470	Avoid reassigning parameters such as 'box'
1595	src/att/grappa/GrappaSupport.java	470	The method boxFromCorners() has an NPath complexity of 1250
1596	src/att/grappa/GrappaSupport.java	479	This statement may have some unnecessary parentheses
1597	src/att/grappa/GrappaSupport.java	492	The method 'findContainingElement' has a Cyclomatic Complexity of 12.
1598	src/att/grappa/GrappaSupport.java	494	Found 'DD'-anomaly for variable 'elem' (lines '494'-'501').
1599	src/att/grappa/GrappaSupport.java	498	Found 'DD'-anomaly for variable 'grappaNexus' (lines '498'-'516').
1600	src/att/grappa/GrappaSupport.java	501	Found 'DD'-anomaly for variable 'elem' (lines '501'-'509').
1601	src/att/grappa/GrappaSupport.java	504	Found 'DD'-anomaly for variable 'subelem' (lines '504'-'508').
1602	src/att/grappa/GrappaSupport.java	508	Avoid assignments in operands
1603	src/att/grappa/GrappaSupport.java	509	Found 'DD'-anomaly for variable 'elem' (lines '509'-'509').
1604	src/att/grappa/GrappaSupport.java	509	Found 'DD'-anomaly for variable 'elem' (lines '509'-'519').
1605	src/att/grappa/GrappaSupport.java	509	Found 'DD'-anomaly for variable 'elem' (lines '509'-'530').
1606	src/att/grappa/GrappaSupport.java	516	Avoid assignments in operands
1607	src/att/grappa/GrappaSupport.java	518	These nested if statements could be combined
1608	src/att/grappa/GrappaSupport.java	519	Found 'DD'-anomaly for variable 'elem' (lines '519'-'519').
1609	src/att/grappa/GrappaSupport.java	519	Found 'DD'-anomaly for variable 'elem' (lines '519'-'530').
1610	src/att/grappa/GrappaSupport.java	527	Avoid assignments in operands
1611	src/att/grappa/GrappaSupport.java	529	These nested if statements could be combined
1612	src/att/grappa/GrappaSupport.java	530	Found 'DD'-anomaly for variable 'elem' (lines '530'-'530').
1613	src/att/grappa/GrappaSupport.java	535	This statement may have some unnecessary parentheses
1614	src/att/grappa/GrappaSupport.java	549	Avoid using implementation types like 'Vector'; use the interface instead
1615	src/att/grappa/GrappaSupport.java	549	Avoid using implementation types like 'Vector'; use the interface instead
1616	src/att/grappa/GrappaSupport.java	549	Consider replacing this Vector with the newer java.util.List
1617	src/att/grappa/GrappaSupport.java	549	The method 'findContainedElements' has a Cyclomatic Complexity of 14.
1618	src/att/grappa/GrappaSupport.java	550	Consider replacing this Vector with the newer java.util.List
1619	src/att/grappa/GrappaSupport.java	550	Found 'DU'-anomaly for variable 'elems' (lines '550'-'597').
1620	src/att/grappa/GrappaSupport.java	554	Found 'DD'-anomaly for variable 'grappaNexus' (lines '554'-'575').
1621	src/att/grappa/GrappaSupport.java	554	Found 'DU'-anomaly for variable 'grappaNexus' (lines '554'-'597').
1622	src/att/grappa/GrappaSupport.java	560	Consider replacing this Vector with the newer java.util.List
1623	src/att/grappa/GrappaSupport.java	560	Found 'DD'-anomaly for variable 'subelems' (lines '560'-'564').
1624	src/att/grappa/GrappaSupport.java	564	Avoid assignments in operands
1625	src/att/grappa/GrappaSupport.java	566	Avoid instantiating new objects inside loops
1626	src/att/grappa/GrappaSupport.java	566	Use ArrayList instead of Vector
1627	src/att/grappa/GrappaSupport.java	575	Avoid assignments in operands
1628	src/att/grappa/GrappaSupport.java	578	Avoid instantiating new objects inside loops
1629	src/att/grappa/GrappaSupport.java	578	Use ArrayList instead of Vector
1630	src/att/grappa/GrappaSupport.java	590	Avoid instantiating new objects inside loops
1631	src/att/grappa/GrappaSupport.java	590	Use ArrayList instead of Vector
1632	src/att/grappa/GrappaSupport.java	611	Avoid reassigning parameters such as 'mode'
1633	src/att/grappa/GrappaSupport.java	611	The method 'setHighlight' has a Cyclomatic Complexity of 19.
1634	src/att/grappa/GrappaSupport.java	712	Avoid really long methods.
1635	src/att/grappa/GrappaSupport.java	712	The method 'filterGraph' has a Cyclomatic Complexity of 21.
1636	src/att/grappa/GrappaSupport.java	712	The method filterGraph() has an NPath complexity of 34560
1637	src/att/grappa/GrappaSupport.java	714	Found 'DD'-anomaly for variable 'toFilterRaw' (lines '714'-'717').
1638	src/att/grappa/GrappaSupport.java	714	Found 'DD'-anomaly for variable 'toFilterRaw' (lines '714'-'719').
1639	src/att/grappa/GrappaSupport.java	714	Found 'DU'-anomaly for variable 'toFilterRaw' (lines '714'-'829').
1640	src/att/grappa/GrappaSupport.java	717	Found 'DU'-anomaly for variable 'toFilterRaw' (lines '717'-'829').
1641	src/att/grappa/GrappaSupport.java	719	Found 'DU'-anomaly for variable 'toFilterRaw' (lines '719'-'829').
1642	src/att/grappa/GrappaSupport.java	793	Assigning an Object to null is a code smell. Consider refactoring.
1643	src/att/grappa/GrappaSupport.java	798	Avoid empty catch blocks
1644	src/att/grappa/GrappaSupport.java	852	Avoid throwing raw exception types.
1645	src/att/grappa/GrappaSupport.java	856	Found 'DU'-anomaly for variable 'b' (lines '856'-'868').
1646	src/att/grappa/GrappaSupport.java	857	Found 'DU'-anomaly for variable 'd' (lines '857'-'868').
1647	src/att/grappa/GrappaSupport.java	863	Found 'DD'-anomaly for variable 'r' (lines '863'-'864').
1648	src/att/grappa/GrappaSupportPrintf.java	19	The class 'GrappaSupportPrintf' has a Cyclomatic Complexity of 83 (Highest = 82).
1649	src/att/grappa/GrappaSupportPrintf.java	23	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
1650	src/att/grappa/GrappaSupportPrintf.java	40	Avoid really long methods.
1651	src/att/grappa/GrappaSupportPrintf.java	40	The method 'sprintf' has a Cyclomatic Complexity of 82.
1652	src/att/grappa/GrappaSupportPrintf.java	40	The method sprintf() has an NCSS line count of 246
1653	src/att/grappa/GrappaSupportPrintf.java	40	The method sprintf() has an NPath complexity of 238
1654	src/att/grappa/GrappaSupportPrintf.java	41	Parameter 'args' is not assigned and could be declared final
1655	src/att/grappa/GrappaSupportPrintf.java	48	Avoid variables with short names like n
1656	src/att/grappa/GrappaSupportPrintf.java	49	Avoid variables with short names like ch
1657	src/att/grappa/GrappaSupportPrintf.java	53	Avoid throwing raw exception types.
1658	src/att/grappa/GrappaSupportPrintf.java	60	Found 'DU'-anomaly for variable 'prtbuf' (lines '60'-'281').
1659	src/att/grappa/GrappaSupportPrintf.java	64	Avoid assignments in operands
1660	src/att/grappa/GrappaSupportPrintf.java	64	Found 'DD'-anomaly for variable 'ch' (lines '64'-'66').
1661	src/att/grappa/GrappaSupportPrintf.java	65	Avoid assignments in operands
1662	src/att/grappa/GrappaSupportPrintf.java	66	Found 'DU'-anomaly for variable 'ch' (lines '66'-'281').
1663	src/att/grappa/GrappaSupportPrintf.java	68	Avoid throwing raw exception types.
1664	src/att/grappa/GrappaSupportPrintf.java	68	Avoid using if statements without curly braces
1665	src/att/grappa/GrappaSupportPrintf.java	68	The String literal "too few arguments for format" appears 15 times in this file; the first occurrence is on line 68
1666	src/att/grappa/GrappaSupportPrintf.java	70	Avoid using if...else statements without curly braces
1667	src/att/grappa/GrappaSupportPrintf.java	70	Found 'DU'-anomaly for variable 'flag' (lines '70'-'281').
1668	src/att/grappa/GrappaSupportPrintf.java	72	Avoid using if...else statements without curly braces
1669	src/att/grappa/GrappaSupportPrintf.java	72	Found 'DU'-anomaly for variable 'flag' (lines '72'-'281').
1670	src/att/grappa/GrappaSupportPrintf.java	74	Avoid using if...else statements without curly braces
1671	src/att/grappa/GrappaSupportPrintf.java	75	Avoid throwing raw exception types.
1672	src/att/grappa/GrappaSupportPrintf.java	75	Avoid using if...else statements without curly braces
1673	src/att/grappa/GrappaSupportPrintf.java	75	The String literal "argument " appears 14 times in this file; the first occurrence is on line 75
1674	src/att/grappa/GrappaSupportPrintf.java	79	Avoid throwing raw exception types.
1675	src/att/grappa/GrappaSupportPrintf.java	79	Avoid using if statements without curly braces
1676	src/att/grappa/GrappaSupportPrintf.java	81	Avoid using if...else statements without curly braces
1677	src/att/grappa/GrappaSupportPrintf.java	81	Found 'DU'-anomaly for variable 'flag' (lines '81'-'281').
1678	src/att/grappa/GrappaSupportPrintf.java	83	Found 'DU'-anomaly for variable 'flag' (lines '83'-'281').
1679	src/att/grappa/GrappaSupportPrintf.java	86	Avoid throwing raw exception types.
1680	src/att/grappa/GrappaSupportPrintf.java	89	Avoid using if statements without curly braces
1681	src/att/grappa/GrappaSupportPrintf.java	96	Avoid using if statements without curly braces
1682	src/att/grappa/GrappaSupportPrintf.java	103	Avoid using if statements without curly braces
1683	src/att/grappa/GrappaSupportPrintf.java	108	The String literal " should be a Character or Number" appears 8 times in this file; the first occurrence is on line 108
1684	src/att/grappa/GrappaSupportPrintf.java	210	Found 'DU'-anomaly for variable 'ch' (lines '210'-'281').
1685	src/att/grappa/GrappaSupportPrintf.java	210	Switch statements should have a default label
1686	src/att/grappa/GrappaSupportPrintf.java	237	Local variable 'uni' could be declared final
1687	src/att/grappa/GrappaSupportPrintf.java	269	Local variable 'oct' could be declared final
1688	src/att/grappa/GrappaSupportPrintf.java	280	This statement may have some unnecessary parentheses
1689	src/att/grappa/GrappaSupportPrintf.java	286	The class 'PrintfParser' has a Cyclomatic Complexity of 9 (Highest = 18).
1690	src/att/grappa/GrappaSupportPrintf.java	290	This class has too many methods, consider refactoring it.
1691	src/att/grappa/GrappaSupportPrintf.java	292	Found non-transient, non-static member. Please mark as transient or provide accessors.
1692	src/att/grappa/GrappaSupportPrintf.java	293	Found non-transient, non-static member. Please mark as transient or provide accessors.
1693	src/att/grappa/GrappaSupportPrintf.java	294	Found non-transient, non-static member. Please mark as transient or provide accessors.
1694	src/att/grappa/GrappaSupportPrintf.java	294	Perhaps 'sign' could be replaced by a local variable.
1695	src/att/grappa/GrappaSupportPrintf.java	295	Found non-transient, non-static member. Please mark as transient or provide accessors.
1696	src/att/grappa/GrappaSupportPrintf.java	295	Perhaps 'space' could be replaced by a local variable.
1697	src/att/grappa/GrappaSupportPrintf.java	296	Found non-transient, non-static member. Please mark as transient or provide accessors.
1698	src/att/grappa/GrappaSupportPrintf.java	302	Private field 'scratch' could be made final; it is only initialized in the declaration or constructor.
1699	src/att/grappa/GrappaSupportPrintf.java	302	StringBuffers can grow quite a lot, and so may become a source of memory leak (if the owning class has a long life time).
1700	src/att/grappa/GrappaSupportPrintf.java	321	Use explicit scoping instead of the default package private level
1701	src/att/grappa/GrappaSupportPrintf.java	322	Parameter 'cfmt' is not assigned and could be declared final
1702	src/att/grappa/GrappaSupportPrintf.java	324	This statement may have some unnecessary parentheses
1703	src/att/grappa/GrappaSupportPrintf.java	329	The method 'parse' has a Cyclomatic Complexity of 15.
1704	src/att/grappa/GrappaSupportPrintf.java	329	The method parse() has an NPath complexity of 2520
1705	src/att/grappa/GrappaSupportPrintf.java	329	Use explicit scoping instead of the default package private level
1706	src/att/grappa/GrappaSupportPrintf.java	330	Avoid reassigning parameters such as 'n'
1707	src/att/grappa/GrappaSupportPrintf.java	330	Avoid reassigning parameters such as 'n'
1708	src/att/grappa/GrappaSupportPrintf.java	330	Avoid reassigning parameters such as 'n'
1709	src/att/grappa/GrappaSupportPrintf.java	330	Avoid reassigning parameters such as 'n'
1710	src/att/grappa/GrappaSupportPrintf.java	330	Avoid reassigning parameters such as 'n'
1711	src/att/grappa/GrappaSupportPrintf.java	330	Avoid variables with short names like n
1712	src/att/grappa/GrappaSupportPrintf.java	330	Parameter 'cfmt' is not assigned and could be declared final
1713	src/att/grappa/GrappaSupportPrintf.java	333	Avoid variables with short names like ch
1714	src/att/grappa/GrappaSupportPrintf.java	356	Found 'DU'-anomaly for variable 'done' (lines '356'-'374').
1715	src/att/grappa/GrappaSupportPrintf.java	362	Avoid using for statements without curly braces
1716	src/att/grappa/GrappaSupportPrintf.java	362	Found 'DD'-anomaly for variable 'ch' (lines '362'-'367').
1717	src/att/grappa/GrappaSupportPrintf.java	362	Found 'DU'-anomaly for variable 'ch' (lines '362'-'374').
1718	src/att/grappa/GrappaSupportPrintf.java	367	Avoid using for statements without curly braces
1719	src/att/grappa/GrappaSupportPrintf.java	367	Found 'DU'-anomaly for variable 'ch' (lines '367'-'374').
1720	src/att/grappa/GrappaSupportPrintf.java	373	This statement may have some unnecessary parentheses
1721	src/att/grappa/GrappaSupportPrintf.java	378	Use explicit scoping instead of the default package private level
1722	src/att/grappa/GrappaSupportPrintf.java	379	Parameter 'arg' is not assigned and could be declared final
1723	src/att/grappa/GrappaSupportPrintf.java	379	Parameter 'buf' is not assigned and could be declared final
1724	src/att/grappa/GrappaSupportPrintf.java	383	This statement may have some unnecessary parentheses
1725	src/att/grappa/GrappaSupportPrintf.java	388	The method 'buildExp' has a Cyclomatic Complexity of 10.
1726	src/att/grappa/GrappaSupportPrintf.java	388	The method buildExp() has an NPath complexity of 93750
1727	src/att/grappa/GrappaSupportPrintf.java	388	Use explicit scoping instead of the default package private level
1728	src/att/grappa/GrappaSupportPrintf.java	414	Do not add empty strings
1729	src/att/grappa/GrappaSupportPrintf.java	418	This statement may have some unnecessary parentheses
1730	src/att/grappa/GrappaSupportPrintf.java	423	The method buildFlex() has an NPath complexity of 450
1731	src/att/grappa/GrappaSupportPrintf.java	423	Use explicit scoping instead of the default package private level
1732	src/att/grappa/GrappaSupportPrintf.java	431	Avoid unused local variables such as 'pr'.
1733	src/att/grappa/GrappaSupportPrintf.java	431	Avoid variables with short names like pr
1734	src/att/grappa/GrappaSupportPrintf.java	431	Local variable 'pr' could be declared final
1735	src/att/grappa/GrappaSupportPrintf.java	435	Found 'DD'-anomaly for variable 'val' (lines '435'-'437').
1736	src/att/grappa/GrappaSupportPrintf.java	472	The method buildPoint() has an NPath complexity of 4505
1737	src/att/grappa/GrappaSupportPrintf.java	475	Found 'DD'-anomaly for variable 'arg' (lines '475'-'487').
1738	src/att/grappa/GrappaSupportPrintf.java	476	Found 'DD'-anomaly for variable 'exp' (lines '476'-'499').
1739	src/att/grappa/GrappaSupportPrintf.java	476	Found 'DD'-anomaly for variable 'exp' (lines '476'-'501').
1740	src/att/grappa/GrappaSupportPrintf.java	476	Found 'DU'-anomaly for variable 'exp' (lines '476'-'530').
1741	src/att/grappa/GrappaSupportPrintf.java	477	Found 'DD'-anomaly for variable 'val' (lines '477'-'489').
1742	src/att/grappa/GrappaSupportPrintf.java	478	Found 'DD'-anomaly for variable 'ival' (lines '478'-'495').
1743	src/att/grappa/GrappaSupportPrintf.java	478	Found 'DU'-anomaly for variable 'ival' (lines '478'-'530').
1744	src/att/grappa/GrappaSupportPrintf.java	479	Found 'DD'-anomaly for variable 'iexp' (lines '479'-'504').
1745	src/att/grappa/GrappaSupportPrintf.java	479	Found 'DU'-anomaly for variable 'iexp' (lines '479'-'530').
1746	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'511').
1747	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'512').
1748	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'516').
1749	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'517').
1750	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'520').
1751	src/att/grappa/GrappaSupportPrintf.java	480	Found 'DD'-anomaly for variable 'retbuf' (lines '480'-'521').
1752	src/att/grappa/GrappaSupportPrintf.java	482	Avoid unused local variables such as 'pr'.
1753	src/att/grappa/GrappaSupportPrintf.java	482	Local variable 'pr' could be declared final
1754	src/att/grappa/GrappaSupportPrintf.java	487	Found 'DD'-anomaly for variable 'arg' (lines '487'-'488').
1755	src/att/grappa/GrappaSupportPrintf.java	489	Found 'DD'-anomaly for variable 'val' (lines '489'-'490').
1756	src/att/grappa/GrappaSupportPrintf.java	490	Found 'DU'-anomaly for variable 'val' (lines '490'-'530').
1757	src/att/grappa/GrappaSupportPrintf.java	491	Found 'DU'-anomaly for variable 'orig_precision' (lines '491'-'530').
1758	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'511').
1759	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'512').
1760	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'516').
1761	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'517').
1762	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'520').
1763	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'521').
1764	src/att/grappa/GrappaSupportPrintf.java	511	Found 'DD'-anomaly for variable 'retbuf' (lines '511'-'524').
1765	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'511').
1766	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'512').
1767	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'516').
1768	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'517').
1769	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'520').
1770	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'521').
1771	src/att/grappa/GrappaSupportPrintf.java	512	Found 'DD'-anomaly for variable 'retbuf' (lines '512'-'524').
1772	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'511').
1773	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'512').
1774	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'516').
1775	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'517').
1776	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'520').
1777	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'521').
1778	src/att/grappa/GrappaSupportPrintf.java	516	Found 'DD'-anomaly for variable 'retbuf' (lines '516'-'524').
1779	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'511').
1780	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'512').
1781	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'516').
1782	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'517').
1783	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'520').
1784	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'521').
1785	src/att/grappa/GrappaSupportPrintf.java	517	Found 'DD'-anomaly for variable 'retbuf' (lines '517'-'524').
1786	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'511').
1787	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'512').
1788	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'516').
1789	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'517').
1790	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'520').
1791	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'521').
1792	src/att/grappa/GrappaSupportPrintf.java	520	Found 'DD'-anomaly for variable 'retbuf' (lines '520'-'524').
1793	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'511').
1794	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'512').
1795	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'516').
1796	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'517').
1797	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'520').
1798	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'521').
1799	src/att/grappa/GrappaSupportPrintf.java	521	Found 'DD'-anomaly for variable 'retbuf' (lines '521'-'524').
1800	src/att/grappa/GrappaSupportPrintf.java	537	Found 'DD'-anomaly for variable 'arg' (lines '537'-'549').
1801	src/att/grappa/GrappaSupportPrintf.java	538	Found 'DD'-anomaly for variable 'exp' (lines '538'-'561').
1802	src/att/grappa/GrappaSupportPrintf.java	539	Found 'DD'-anomaly for variable 'val' (lines '539'-'551').
1803	src/att/grappa/GrappaSupportPrintf.java	540	Found 'DD'-anomaly for variable 'ival' (lines '540'-'557').
1804	src/att/grappa/GrappaSupportPrintf.java	541	Found 'DD'-anomaly for variable 'iexp' (lines '541'-'566').
1805	src/att/grappa/GrappaSupportPrintf.java	542	Found 'DD'-anomaly for variable 'retbuf' (lines '542'-'573').
1806	src/att/grappa/GrappaSupportPrintf.java	542	Found 'DD'-anomaly for variable 'retbuf' (lines '542'-'574').
1807	src/att/grappa/GrappaSupportPrintf.java	542	Found 'DD'-anomaly for variable 'retbuf' (lines '542'-'578').
1808	src/att/grappa/GrappaSupportPrintf.java	544	Avoid unused local variables such as 'pr'.
1809	src/att/grappa/GrappaSupportPrintf.java	544	Local variable 'pr' could be declared final
1810	src/att/grappa/GrappaSupportPrintf.java	549	Found 'DD'-anomaly for variable 'arg' (lines '549'-'550').
1811	src/att/grappa/GrappaSupportPrintf.java	551	Found 'DD'-anomaly for variable 'val' (lines '551'-'552').
1812	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'573').
1813	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'574').
1814	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'578').
1815	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'579').
1816	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'582').
1817	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'583').
1818	src/att/grappa/GrappaSupportPrintf.java	573	Found 'DD'-anomaly for variable 'retbuf' (lines '573'-'586').
1819	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'573').
1820	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'574').
1821	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'578').
1822	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'579').
1823	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'582').
1824	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'583').
1825	src/att/grappa/GrappaSupportPrintf.java	574	Found 'DD'-anomaly for variable 'retbuf' (lines '574'-'586').
1826	src/att/grappa/GrappaSupportPrintf.java	578	Found 'DD'-anomaly for variable 'retbuf' (lines '578'-'573').
1827	src/att/grappa/GrappaSupportPrintf.java	578	Found 'DD'-anomaly for variable 'retbuf' (lines '578'-'574').
1828	src/att/grappa/GrappaSupportPrintf.java	606	Avoid unused local variables such as 'pr'.
1829	src/att/grappa/GrappaSupportPrintf.java	611	Avoid if (x != y) ..; else ..;
1830	src/att/grappa/GrappaSupportPrintf.java	675	Avoid unused local variables such as 'sign'.
1831	src/att/grappa/GrappaSupportPrintf.java	739	Do not add empty strings
1832	src/att/grappa/GrappaSupportPrintf.java	823	Avoid if (x != y) ..; else ..;
1833	src/att/grappa/GrappaSupportPrintf.java	827	Do not add empty strings
1834	src/att/grappa/GrappaSupportPrintf.java	831	Avoid using while statements without curly braces
1835	src/att/grappa/GrappaSupportPrintf.java	879	Avoid assignments in operands
1836	src/att/grappa/GrappaSupportPrintf.java	882	Avoid using for statements without curly braces
1837	src/att/grappa/GrappaSupportRects.java	28	The class 'GrappaSupportRects' has a Cyclomatic Complexity of 16 (Highest = 45).
1838	src/att/grappa/GrappaSupportRects.java	30	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
1839	src/att/grappa/GrappaSupportRects.java	34	Use explicit scoping instead of the default package private level
1840	src/att/grappa/GrappaSupportRects.java	56	Avoid excessively long variable names like helveticaFontwidth
1841	src/att/grappa/GrappaSupportRects.java	56	Use explicit scoping instead of the default package private level
1842	src/att/grappa/GrappaSupportRects.java	78	Use explicit scoping instead of the default package private level
1843	src/att/grappa/GrappaSupportRects.java	78	Variables that are final and static should be in all caps.
1844	src/att/grappa/GrappaSupportRects.java	80	Use explicit scoping instead of the default package private level
1845	src/att/grappa/GrappaSupportRects.java	81	Use explicit scoping instead of the default package private level
1846	src/att/grappa/GrappaSupportRects.java	91	StringBuffers can grow quite a lot, and so may become a source of memory leak (if the owning class has a long life time).
1847	src/att/grappa/GrappaSupportRects.java	94	Parameter 'node' is not assigned and could be declared final
1848	src/att/grappa/GrappaSupportRects.java	94	Use block level rather than method level synchronization
1849	src/att/grappa/GrappaSupportRects.java	95	Found 'DD'-anomaly for variable 'objs' (lines '95'-'130').
1850	src/att/grappa/GrappaSupportRects.java	98	A method should have only one exit point, and that should be the last statement in the method
1851	src/att/grappa/GrappaSupportRects.java	109	A method should have only one exit point, and that should be the last statement in the method
1852	src/att/grappa/GrappaSupportRects.java	114	Local variable 'tableField' could be declared final
1853	src/att/grappa/GrappaSupportRects.java	118	A method should have only one exit point, and that should be the last statement in the method
1854	src/att/grappa/GrappaSupportRects.java	122	Local variable 'width' could be declared final
1855	src/att/grappa/GrappaSupportRects.java	123	Local variable 'height' could be declared final
1856	src/att/grappa/GrappaSupportRects.java	124	Avoid variables with short names like sz
1857	src/att/grappa/GrappaSupportRects.java	124	Local variable 'sz' could be declared final
1858	src/att/grappa/GrappaSupportRects.java	127	Local variable 'pos' could be declared final
1859	src/att/grappa/GrappaSupportRects.java	130	Found 'DD'-anomaly for variable 'objs' (lines '130'-'131').
1860	src/att/grappa/GrappaSupportRects.java	137	Assigning an Object to null is a code smell. Consider refactoring.
1861	src/att/grappa/GrappaSupportRects.java	139	Assigning an Object to null is a code smell. Consider refactoring.
1862	src/att/grappa/GrappaSupportRects.java	150	Avoid variables with short names like tf
1863	src/att/grappa/GrappaSupportRects.java	150	Parameter 'objs' is not assigned and could be declared final
1864	src/att/grappa/GrappaSupportRects.java	150	Parameter 'tf' is not assigned and could be declared final
1865	src/att/grappa/GrappaSupportRects.java	150	The method emitFields() has an NPath complexity of 306
1866	src/att/grappa/GrappaSupportRects.java	151	Found 'DD'-anomaly for variable 'retval' (lines '151'-'179').
1867	src/att/grappa/GrappaSupportRects.java	151	Found 'DU'-anomaly for variable 'retval' (lines '151'-'182').
1868	src/att/grappa/GrappaSupportRects.java	153	A method should have only one exit point, and that should be the last statement in the method
1869	src/att/grappa/GrappaSupportRects.java	153	Avoid using if statements without curly braces
1870	src/att/grappa/GrappaSupportRects.java	155	Avoid variables with short names like fc
1871	src/att/grappa/GrappaSupportRects.java	159	Singleton is not thread safe
1872	src/att/grappa/GrappaSupportRects.java	168	Avoid concatenating nonliterals in a StringBuffer constructor or append().
1873	src/att/grappa/GrappaSupportRects.java	170	An empty statement (semicolon) not part of a loop
1874	src/att/grappa/GrappaSupportRects.java	175	A method should have only one exit point, and that should be the last statement in the method
1875	src/att/grappa/GrappaSupportRects.java	178	Avoid using if statements without curly braces
1876	src/att/grappa/GrappaSupportRects.java	179	Found 'DD'-anomaly for variable 'retval' (lines '179'-'179').
1877	src/att/grappa/GrappaSupportRects.java	181	This statement may have some unnecessary parentheses
1878	src/att/grappa/GrappaSupportRects.java	184	Avoid really long methods.
1879	src/att/grappa/GrappaSupportRects.java	184	Avoid variables with short names like LR
1880	src/att/grappa/GrappaSupportRects.java	184	Parameter 'LR' is not assigned and could be declared final
1881	src/att/grappa/GrappaSupportRects.java	184	Parameter 'node' is not assigned and could be declared final
1882	src/att/grappa/GrappaSupportRects.java	184	The method 'doParse' has a Cyclomatic Complexity of 45.
1883	src/att/grappa/GrappaSupportRects.java	184	The method doParse() has an NCSS line count of 110
1884	src/att/grappa/GrappaSupportRects.java	184	The method doParse() has an NPath complexity of 50874
1885	src/att/grappa/GrappaSupportRects.java	186	Found 'DD'-anomaly for variable 'cnt' (lines '186'-'195').
1886	src/att/grappa/GrappaSupportRects.java	206	Avoid variables with short names like rv
1887	src/att/grappa/GrappaSupportRects.java	214	Found 'DU'-anomaly for variable 'textBuf' (lines '214'-'320').
1888	src/att/grappa/GrappaSupportRects.java	215	Found 'DU'-anomaly for variable 'portBuf' (lines '215'-'320').
1889	src/att/grappa/GrappaSupportRects.java	217	Found 'DU'-anomaly for variable 'mode' (lines '217'-'320').
1890	src/att/grappa/GrappaSupportRects.java	218	Avoid unused local variables such as 'fi'.
1891	src/att/grappa/GrappaSupportRects.java	218	Found 'DU'-anomaly for variable 'fi' (lines '218'-'320').
1892	src/att/grappa/GrappaSupportRects.java	220	Found 'DD'-anomaly for variable 'tf' (lines '220'-'250').
1893	src/att/grappa/GrappaSupportRects.java	220	Found 'DD'-anomaly for variable 'tf' (lines '220'-'264').
1894	src/att/grappa/GrappaSupportRects.java	220	Found 'DU'-anomaly for variable 'tf' (lines '220'-'320').
1895	src/att/grappa/GrappaSupportRects.java	221	Found 'DD'-anomaly for variable 'curCh' (lines '221'-'224').
1896	src/att/grappa/GrappaSupportRects.java	221	Found 'DD'-anomaly for variable 'curCh' (lines '221'-'227').
1897	src/att/grappa/GrappaSupportRects.java	221	Found 'DU'-anomaly for variable 'curCh' (lines '221'-'320').
1898	src/att/grappa/GrappaSupportRects.java	225	Found 'DU'-anomaly for variable 'wflag' (lines '225'-'320').
1899	src/att/grappa/GrappaSupportRects.java	249	Found 'DU'-anomaly for variable 'mode' (lines '249'-'320').
1900	src/att/grappa/GrappaSupportRects.java	250	Avoid assignments in operands
1901	src/att/grappa/GrappaSupportRects.java	250	Found 'DU'-anomaly for variable 'tf' (lines '250'-'320').
1902	src/att/grappa/GrappaSupportRects.java	264	Avoid instantiating new objects inside loops
1903	src/att/grappa/GrappaSupportRects.java	288	Found 'DU'-anomaly for variable 'mode' (lines '288'-'320').
1904	src/att/grappa/GrappaSupportRects.java	310	Avoid if (x != y) ..; else ..;
1905	src/att/grappa/GrappaSupportRects.java	327	The class 'TableField' has a Cyclomatic Complexity of 3 (Highest = 17).
1906	src/att/grappa/GrappaSupportRects.java	329	This class has too many methods, consider refactoring it.
1907	src/att/grappa/GrappaSupportRects.java	330	Private field 'size' could be made final; it is only initialized in the declaration or constructor.
1908	src/att/grappa/GrappaSupportRects.java	331	Private field 'bounds' could be made final; it is only initialized in the declaration or constructor.
1909	src/att/grappa/GrappaSupportRects.java	333	Found non-transient, non-static member. Please mark as transient or provide accessors.
1910	src/att/grappa/GrappaSupportRects.java	333	It is somewhat confusing to have a field name with the same name as a method
1911	src/att/grappa/GrappaSupportRects.java	334	Found non-transient, non-static member. Please mark as transient or provide accessors.
1912	src/att/grappa/GrappaSupportRects.java	335	Found non-transient, non-static member. Please mark as transient or provide accessors.
1913	src/att/grappa/GrappaSupportRects.java	336	Found non-transient, non-static member. Please mark as transient or provide accessors.
1914	src/att/grappa/GrappaSupportRects.java	337	Found non-transient, non-static member. Please mark as transient or provide accessors.
1915	src/att/grappa/GrappaSupportRects.java	353	Avoid using while statements without curly braces
1916	src/att/grappa/GrappaSupportRects.java	430	Use block level rather than method level synchronization
1917	src/att/grappa/GrappaSupportRects.java	431	Avoid using if statements without curly braces
1918	src/att/grappa/GrappaSupportRects.java	443	Use block level rather than method level synchronization
1919	src/att/grappa/GrappaSupportRects.java	449	Avoid using if statements without curly braces
1920	src/att/grappa/GrappaSupportRects.java	466	Assigning an Object to null is a code smell. Consider refactoring.
1921	src/att/grappa/GrappaSupportRects.java	467	Avoid using if statements without curly braces
1922	src/att/grappa/GrappaSupportRects.java	469	Found 'DD'-anomaly for variable 'hadNBSP' (lines '469'-'473').
1923	src/att/grappa/GrappaSupportRects.java	473	Found 'DD'-anomaly for variable 'hadNBSP' (lines '473'-'473').
1924	src/att/grappa/GrappaSupportRects.java	476	Avoid using if...else statements without curly braces
1925	src/att/grappa/GrappaSupportRects.java	477	Avoid using if...else statements without curly braces
1926	src/att/grappa/GrappaSupportRects.java	488	Avoid if (x != y) ..; else ..;
1927	src/att/grappa/GrappaSupportRects.java	494	Found 'DD'-anomaly for variable 'dtmp' (lines '494'-'497').
1928	src/att/grappa/GrappaSupportRects.java	494	Found 'DU'-anomaly for variable 'dtmp' (lines '494'-'510').
1929	src/att/grappa/GrappaSupportRects.java	520	Found 'DU'-anomaly for variable 'delta' (lines '520'-'551').
1930	src/att/grappa/GrappaSupportRects.java	531	Found 'DD'-anomaly for variable 'incr' (lines '531'-'533').
1931	src/att/grappa/GrappaSupportRects.java	531	Found 'DD'-anomaly for variable 'incr' (lines '531'-'535').
1932	src/att/grappa/GrappaSupportRects.java	533	Found 'DU'-anomaly for variable 'incr' (lines '533'-'551').
1933	src/att/grappa/GrappaSupportRects.java	535	Found 'DU'-anomaly for variable 'incr' (lines '535'-'551').
1934	src/att/grappa/GrappaSupportRects.java	537	Found 'DD'-anomaly for variable 'tfield' (lines '537'-'542').
1935	src/att/grappa/GrappaSupportRects.java	537	Found 'DU'-anomaly for variable 'tfield' (lines '537'-'551').
1936	src/att/grappa/GrappaSupportRects.java	538	Found 'DD'-anomaly for variable 'amt' (lines '538'-'543').
1937	src/att/grappa/GrappaSupportRects.java	538	Found 'DU'-anomaly for variable 'amt' (lines '538'-'551').
1938	src/att/grappa/GrappaSupportRects.java	540	Found 'DU'-anomaly for variable 'newSz' (lines '540'-'551').
1939	src/att/grappa/GrappaSupportRects.java	576	Found 'DD'-anomaly for variable 'tfield' (lines '576'-'578').
1940	src/att/grappa/GrappaSupportRects.java	576	Found 'DU'-anomaly for variable 'tfield' (lines '576'-'586').
1941	src/att/grappa/GrappaSupportRects.java	579	Avoid instantiating new objects inside loops
1942	src/att/grappa/GrappaSupportRects.java	588	The method 'setTextBounds' has a Cyclomatic Complexity of 17.
1943	src/att/grappa/GrappaSupportRects.java	588	The method setTextBounds() has an NPath complexity of 1270
1944	src/att/grappa/GrappaSupportRects.java	589	Found 'DD'-anomaly for variable 'lines' (lines '589'-'612').
1945	src/att/grappa/GrappaSupportRects.java	590	Found 'DD'-anomaly for variable 'cwFont' (lines '590'-'595').
1946	src/att/grappa/GrappaSupportRects.java	590	Found 'DU'-anomaly for variable 'cwFont' (lines '590'-'629').
1947	src/att/grappa/GrappaSupportRects.java	591	Found 'DD'-anomaly for variable 'fontwidth' (lines '591'-'597').
1948	src/att/grappa/GrappaSupportRects.java	591	Found 'DD'-anomaly for variable 'fontwidth' (lines '591'-'599').
1949	src/att/grappa/GrappaSupportRects.java	591	Found 'DU'-anomaly for variable 'fontwidth' (lines '591'-'629').
1950	src/att/grappa/GrappaSupportRects.java	595	Found 'DU'-anomaly for variable 'cwFont' (lines '595'-'629').
1951	src/att/grappa/GrappaSupportRects.java	597	Found 'DU'-anomaly for variable 'fontwidth' (lines '597'-'629').
1952	src/att/grappa/GrappaSupportRects.java	599	Found 'DU'-anomaly for variable 'fontwidth' (lines '599'-'629').
1953	src/att/grappa/GrappaSupportRects.java	605	Found 'DD'-anomaly for variable 'value' (lines '605'-'620').
1954	src/att/grappa/GrappaSupportRects.java	605	Found 'DU'-anomaly for variable 'value' (lines '605'-'629').
1955	src/att/grappa/GrappaSupportRects.java	611	These nested if statements could be combined
1956	src/att/grappa/GrappaSupportRects.java	612	Found 'DD'-anomaly for variable 'lines' (lines '612'-'612').
1957	src/att/grappa/GrappaSupportRects.java	632	This statement may have some unnecessary parentheses
1958	src/att/grappa/GrappaSupportRects.java	642	Found 'DD'-anomaly for variable 'tfield' (lines '642'-'644').
1959	src/att/grappa/GrappaSupportRects.java	642	Found 'DU'-anomaly for variable 'tfield' (lines '642'-'647').
1960	src/att/grappa/Lexer.java	26	The class 'Lexer' has a Cyclomatic Complexity of 5 (Highest = 22).
1961	src/att/grappa/Lexer.java	27	This class has too many methods, consider refactoring it.
1962	src/att/grappa/Lexer.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
1963	src/att/grappa/Lexer.java	32	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1964	src/att/grappa/Lexer.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
1965	src/att/grappa/Lexer.java	38	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1966	src/att/grappa/Lexer.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
1967	src/att/grappa/Lexer.java	44	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1968	src/att/grappa/Lexer.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
1969	src/att/grappa/Lexer.java	49	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1970	src/att/grappa/Lexer.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
1971	src/att/grappa/Lexer.java	64	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
1972	src/att/grappa/Lexer.java	66	Use explicit scoping instead of the default package private level
1973	src/att/grappa/Lexer.java	71	Avoid unused private fields such as 'error_count'.
1974	src/att/grappa/Lexer.java	76	Avoid unused private fields such as 'warning_count'.
1975	src/att/grappa/Lexer.java	81	Consider replacing this Hashtable with the newer java.util.Map
1976	src/att/grappa/Lexer.java	81	Private field 'keywords' could be made final; it is only initialized in the declaration or constructor.
1977	src/att/grappa/Lexer.java	82	Consider replacing this Hashtable with the newer java.util.Map
1978	src/att/grappa/Lexer.java	82	Private field 'char_symbols' could be made final; it is only initialized in the declaration or constructor.
1979	src/att/grappa/Lexer.java	84	Private field 'inReader' could be made final; it is only initialized in the declaration or constructor.
1980	src/att/grappa/Lexer.java	85	Private field 'errWriter' could be made final; it is only initialized in the declaration or constructor.
1981	src/att/grappa/Lexer.java	90	Private field 'cmnstrbuf' could be made final; it is only initialized in the declaration or constructor.
1982	src/att/grappa/Lexer.java	90	StringBuffers can grow quite a lot, and so may become a source of memory leak (if the owning class has a long life time).
1983	src/att/grappa/Lexer.java	102	Parameter 'error' is not assigned and could be declared final
1984	src/att/grappa/Lexer.java	102	Parameter 'input' is not assigned and could be declared final
1985	src/att/grappa/Lexer.java	120	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1986	src/att/grappa/Lexer.java	121	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1987	src/att/grappa/Lexer.java	122	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1988	src/att/grappa/Lexer.java	123	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1989	src/att/grappa/Lexer.java	124	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
1990	src/att/grappa/Lexer.java	151	The method 'advance' has a Cyclomatic Complexity of 11.
1991	src/att/grappa/Lexer.java	154	Local variable 'tmp_char' could be declared final
1992	src/att/grappa/Lexer.java	204	Avoid using if statements without curly braces
1993	src/att/grappa/Lexer.java	212	Local variable 'tmp_char' could be declared final
1994	src/att/grappa/Lexer.java	226	Method names should not contain underscores
1995	src/att/grappa/Lexer.java	226	Parameter 'message' is not assigned and could be declared final
1996	src/att/grappa/Lexer.java	227	Local variable 'output' could be declared final
1997	src/att/grappa/Lexer.java	252	Method names should not contain underscores
1998	src/att/grappa/Lexer.java	252	Parameter 'message' is not assigned and could be declared final
1999	src/att/grappa/Lexer.java	263	Avoid variables with short names like ch
2000	src/att/grappa/Lexer.java	263	Method names should not contain underscores
2001	src/att/grappa/Lexer.java	263	Parameter 'ch' is not assigned and could be declared final
2002	src/att/grappa/Lexer.java	264	This statement may have some unnecessary parentheses
2003	src/att/grappa/Lexer.java	271	Avoid variables with short names like ch
2004	src/att/grappa/Lexer.java	271	Method names should not contain underscores
2005	src/att/grappa/Lexer.java	279	Avoid variables with short names like ch
2006	src/att/grappa/Lexer.java	279	Method names should not contain underscores
2007	src/att/grappa/Lexer.java	284	A method should have only one exit point, and that should be the last statement in the method
2008	src/att/grappa/Lexer.java	294	The method 'swallow_comment' has a Cyclomatic Complexity of 10.
2009	src/att/grappa/Lexer.java	308	A method should have only one exit point, and that should be the last statement in the method
2010	src/att/grappa/Lexer.java	314	A method should have only one exit point, and that should be the last statement in the method
2011	src/att/grappa/Lexer.java	366	Avoid instantiating new objects inside loops
2012	src/att/grappa/Lexer.java	386	Found 'DD'-anomaly for variable 'angles' (lines '386'-'398').
2013	src/att/grappa/Lexer.java	386	Found 'DD'-anomaly for variable 'angles' (lines '386'-'400').
2014	src/att/grappa/Lexer.java	386	Found 'DU'-anomaly for variable 'angles' (lines '386'-'413').
2015	src/att/grappa/Lexer.java	398	Avoid using if...else statements without curly braces
2016	src/att/grappa/Lexer.java	399	Avoid using if statements without curly braces
2017	src/att/grappa/Lexer.java	402	Avoid instantiating new objects inside loops
2018	src/att/grappa/Lexer.java	424	Found 'DD'-anomaly for variable 'buffer' (lines '424'-'427').
2019	src/att/grappa/Lexer.java	449	A method should have only one exit point, and that should be the last statement in the method
2020	src/att/grappa/Lexer.java	462	The method 'real_next_token' has a Cyclomatic Complexity of 22.
2021	src/att/grappa/Lexer.java	462	The method real_next_token() has an NPath complexity of 5124
2022	src/att/grappa/Lexer.java	481	A method should have only one exit point, and that should be the last statement in the method
2023	src/att/grappa/Lexer.java	494	Avoid instantiating new objects inside loops
2024	src/att/grappa/Lexer.java	494	Local variable 'result' could be declared final
2025	src/att/grappa/Lexer.java	536	Avoid instantiating new objects inside loops
2026	src/att/grappa/Lexer.java	554	Local variable 'result' could be declared final
2027	src/att/grappa/Node.java	25	The class 'Node' has a Cyclomatic Complexity of 4 (Highest = 16).
2028	src/att/grappa/Node.java	26	This class has too many methods, consider refactoring it.
2029	src/att/grappa/Node.java	32	Variables that are final and static should be in all caps.
2030	src/att/grappa/Node.java	35	Avoid using implementation types like 'Vector'; use the interface instead
2031	src/att/grappa/Node.java	35	Avoid using implementation types like 'Vector'; use the interface instead
2032	src/att/grappa/Node.java	35	Consider replacing this Vector with the newer java.util.List
2033	src/att/grappa/Node.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
2034	src/att/grappa/Node.java	37	Avoid using implementation types like 'Vector'; use the interface instead
2035	src/att/grappa/Node.java	37	Avoid using implementation types like 'Vector'; use the interface instead
2036	src/att/grappa/Node.java	37	Consider replacing this Vector with the newer java.util.List
2037	src/att/grappa/Node.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
2038	src/att/grappa/Node.java	40	Avoid unused private fields such as 'Ports'.
2039	src/att/grappa/Node.java	40	Avoid using implementation types like 'Vector'; use the interface instead
2040	src/att/grappa/Node.java	40	Avoid using implementation types like 'Vector'; use the interface instead
2041	src/att/grappa/Node.java	40	Consider replacing this Vector with the newer java.util.List
2042	src/att/grappa/Node.java	40	Private field 'Ports' could be made final; it is only initialized in the declaration or constructor.
2043	src/att/grappa/Node.java	40	Variables should start with a lowercase character
2044	src/att/grappa/Node.java	48	Parameter 'name' is not assigned and could be declared final
2045	src/att/grappa/Node.java	48	Parameter 'subg' is not assigned and could be declared final
2046	src/att/grappa/Node.java	50	Overridable method 'setName' called during object construction
2047	src/att/grappa/Node.java	62	Parameter 'subg' is not assigned and could be declared final
2048	src/att/grappa/Node.java	88	This statement may have some unnecessary parentheses
2049	src/att/grappa/Node.java	99	This statement may have some unnecessary parentheses
2050	src/att/grappa/Node.java	110	Use explicit scoping instead of the default package private level
2051	src/att/grappa/Node.java	111	Local variable 'oldName' could be declared final
2052	src/att/grappa/Node.java	126	Assigning an Object to null is a code smell. Consider refactoring.
2053	src/att/grappa/Node.java	138	Parameter 'newName' is not assigned and could be declared final
2054	src/att/grappa/Node.java	141	A method should have only one exit point, and that should be the last statement in the method
2055	src/att/grappa/Node.java	144	Local variable 'oldName' could be declared final
2056	src/att/grappa/Node.java	163	Assigning an Object to null is a code smell. Consider refactoring.
2057	src/att/grappa/Node.java	173	Assigning an Object to null is a code smell. Consider refactoring.
2058	src/att/grappa/Node.java	179	Assigning an Object to null is a code smell. Consider refactoring.
2059	src/att/grappa/Node.java	195	Parameter 'edge' is not assigned and could be declared final
2060	src/att/grappa/Node.java	195	Use block level rather than method level synchronization
2061	src/att/grappa/Node.java	196	Avoid using if statements without curly braces
2062	src/att/grappa/Node.java	199	Use ArrayList instead of Vector
2063	src/att/grappa/Node.java	206	Use ArrayList instead of Vector
2064	src/att/grappa/Node.java	225	A method should have only one exit point, and that should be the last statement in the method
2065	src/att/grappa/Node.java	227	Found 'DD'-anomaly for variable 'edge' (lines '227'-'229').
2066	src/att/grappa/Node.java	227	Found 'DU'-anomaly for variable 'edge' (lines '227'-'235').
2067	src/att/grappa/Node.java	231	A method should have only one exit point, and that should be the last statement in the method
2068	src/att/grappa/Node.java	247	A method should have only one exit point, and that should be the last statement in the method
2069	src/att/grappa/Node.java	249	Found 'DD'-anomaly for variable 'edge' (lines '249'-'251').
2070	src/att/grappa/Node.java	249	Found 'DU'-anomaly for variable 'edge' (lines '249'-'257').
2071	src/att/grappa/Node.java	253	A method should have only one exit point, and that should be the last statement in the method
2072	src/att/grappa/Node.java	267	Avoid variables with short names like pt
2073	src/att/grappa/Node.java	270	Avoid if (x != y) ..; else ..;
2074	src/att/grappa/Node.java	271	Avoid variables with short names like w
2075	src/att/grappa/Node.java	271	Local variable 'w' could be declared final
2076	src/att/grappa/Node.java	272	Avoid variables with short names like h
2077	src/att/grappa/Node.java	272	Local variable 'h' could be declared final
2078	src/att/grappa/Node.java	279	This statement may have some unnecessary parentheses
2079	src/att/grappa/Node.java	292	Use block level rather than method level synchronization
2080	src/att/grappa/Node.java	293	Avoid using if statements without curly braces
2081	src/att/grappa/Node.java	295	Avoid using if statements without curly braces
2082	src/att/grappa/Node.java	298	Avoid using if statements without curly braces
2083	src/att/grappa/Node.java	320	The method 'attributeType' has a Cyclomatic Complexity of 16.
2084	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'328').
2085	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'330').
2086	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'332').
2087	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'334').
2088	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'336').
2089	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'338').
2090	src/att/grappa/Node.java	321	Found 'DD'-anomaly for variable 'convtype' (lines '321'-'340').
2091	src/att/grappa/Node.java	321	Found 'DU'-anomaly for variable 'convtype' (lines '321'-'347').
2092	src/att/grappa/Node.java	342	This statement may have some unnecessary parentheses
2093	src/att/grappa/Node.java	346	This statement may have some unnecessary parentheses
2094	src/att/grappa/Node.java	376	Consider replacing this Enumeration with the newer java.util.Iterator
2095	src/att/grappa/Node.java	377	Found non-transient, non-static member. Please mark as transient or provide accessors.
2096	src/att/grappa/Node.java	377	Use explicit scoping instead of the default package private level
2097	src/att/grappa/Node.java	378	Found non-transient, non-static member. Please mark as transient or provide accessors.
2098	src/att/grappa/Node.java	378	Use explicit scoping instead of the default package private level
2099	src/att/grappa/Node.java	379	Avoid using implementation types like 'Vector'; use the interface instead
2100	src/att/grappa/Node.java	379	Avoid using implementation types like 'Vector'; use the interface instead
2101	src/att/grappa/Node.java	379	Consider replacing this Vector with the newer java.util.List
2102	src/att/grappa/Node.java	379	Found non-transient, non-static member. Please mark as transient or provide accessors.
2103	src/att/grappa/Node.java	379	Use explicit scoping instead of the default package private level
2104	src/att/grappa/Node.java	380	Avoid using implementation types like 'Vector'; use the interface instead
2105	src/att/grappa/Node.java	380	Avoid using implementation types like 'Vector'; use the interface instead
2106	src/att/grappa/Node.java	380	Consider replacing this Vector with the newer java.util.List
2107	src/att/grappa/Node.java	380	Use explicit scoping instead of the default package private level
2108	src/att/grappa/Node.java	391	Avoid assignments in operands
2109	src/att/grappa/Node.java	391	Avoid using if statements without curly braces
2110	src/att/grappa/Node.java	391	Found 'DD'-anomaly for variable 'tmp' (lines '391'-'392').
2111	src/att/grappa/Node.java	392	Avoid assignments in operands
2112	src/att/grappa/Node.java	392	Found 'DU'-anomaly for variable 'tmp' (lines '392'-'394').
2113	src/att/grappa/Node.java	399	Avoid assignments in operands
2114	src/att/grappa/Node.java	399	Found 'DD'-anomaly for variable 'tmp' (lines '399'-'403').
2115	src/att/grappa/Node.java	399	Found 'DU'-anomaly for variable 'tmp' (lines '399'-'409').
2116	src/att/grappa/Node.java	403	Avoid assignments in operands
2117	src/att/grappa/Node.java	403	Found 'DU'-anomaly for variable 'tmp' (lines '403'-'409').
2118	src/att/grappa/Parser.java	40	This class has too many methods, consider refactoring it.
2119	src/att/grappa/Parser.java	46	Avoid variables with short names like s
2120	src/att/grappa/Parser.java	46	Parameter 's' is not assigned and could be declared final
2121	src/att/grappa/Parser.java	49	Do not use the short type
2122	src/att/grappa/Parser.java	49	Variables that are final and static should be in all caps.
2123	src/att/grappa/Parser.java	73	Do not use the short type
2124	src/att/grappa/Parser.java	73	Method names should not contain underscores
2125	src/att/grappa/Parser.java	73	Returning '_production_table' may expose an internal array.
2126	src/att/grappa/Parser.java	76	Do not use the short type
2127	src/att/grappa/Parser.java	166	Do not use the short type
2128	src/att/grappa/Parser.java	166	Method names should not contain underscores
2129	src/att/grappa/Parser.java	166	Returning '_action_table' may expose an internal array.
2130	src/att/grappa/Parser.java	169	Do not use the short type
2131	src/att/grappa/Parser.java	178	The String literal "\001\000\002\001\001\000\002\001\001\000\002\001\001" appears 4 times in this file; the first occurrence is on line 178
2132	src/att/grappa/Parser.java	208	Method names should not contain underscores
2133	src/att/grappa/Parser.java	208	Returning '_reduce_table' may expose an internal array.
2134	src/att/grappa/Parser.java	211	Found non-transient, non-static member. Please mark as transient or provide accessors.
2135	src/att/grappa/Parser.java	211	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
2136	src/att/grappa/Parser.java	214	Method names should not contain underscores
2137	src/att/grappa/Parser.java	220	Method names should not contain underscores
2138	src/att/grappa/Parser.java	221	Parameter 'act_num' is not assigned and could be declared final
2139	src/att/grappa/Parser.java	222	Parameter 'parser' is not assigned and could be declared final
2140	src/att/grappa/Parser.java	223	Parameter 'stack' is not assigned and could be declared final
2141	src/att/grappa/Parser.java	224	Parameter 'top' is not assigned and could be declared final
2142	src/att/grappa/Parser.java	261	Found non-transient, non-static member. Please mark as transient or provide accessors.
2143	src/att/grappa/Parser.java	262	Avoid unused private fields such as 'inReader'.
2144	src/att/grappa/Parser.java	262	Found non-transient, non-static member. Please mark as transient or provide accessors.
2145	src/att/grappa/Parser.java	262	Perhaps 'inReader' could be replaced by a local variable.
2146	src/att/grappa/Parser.java	263	Found non-transient, non-static member. Please mark as transient or provide accessors.
2147	src/att/grappa/Parser.java	264	Found non-transient, non-static member. Please mark as transient or provide accessors.
2148	src/att/grappa/Parser.java	350	This statement may have some unnecessary parentheses
2149	src/att/grappa/Parser.java	361	This statement may have some unnecessary parentheses
2150	src/att/grappa/Parser.java	374	Local variable 'loc' could be declared final
2151	src/att/grappa/Parser.java	388	Found 'DU'-anomaly for variable 'loc' (lines '388'-'392').
2152	src/att/grappa/Parser.java	388	Local variable 'loc' could be declared final
2153	src/att/grappa/Parser.java	419	Found 'DU'-anomaly for variable 'loc' (lines '419'-'423').
2154	src/att/grappa/Parser.java	419	Local variable 'loc' could be declared final
2155	src/att/grappa/Parser.java	434	Avoid really long methods.
2156	src/att/grappa/Parser.java	436	A method should have only one exit point, and that should be the last statement in the method
2157	src/att/grappa/Parser.java	445	Found 'DD'-anomaly for variable 'lhs_sym' (lines '445'-'497').
2158	src/att/grappa/Parser.java	445	Found 'DD'-anomaly for variable 'lhs_sym' (lines '445'-'537').
2159	src/att/grappa/Parser.java	529	Avoid if (x != y) ..; else ..;
2160	src/att/grappa/Parser.java	537	Found 'DD'-anomaly for variable 'lhs_sym' (lines '537'-'497').
2161	src/att/grappa/Parser.java	537	Found 'DD'-anomaly for variable 'lhs_sym' (lines '537'-'537').
2162	src/att/grappa/Parser.java	544	Use explicit scoping instead of the default package private level
2163	src/att/grappa/Parser.java	560	Avoid really long classes.
2164	src/att/grappa/Parser.java	560	Avoid using dollar signs in variable/method/class/interface names
2165	src/att/grappa/Parser.java	560	The class 'CUP$Parser$actions' has a Cyclomatic Complexity of 7 (Highest = 70).
2166	src/att/grappa/Parser.java	560	This class has too many methods, consider refactoring it.
2167	src/att/grappa/Parser.java	560	Too many fields
2168	src/att/grappa/Parser.java	565	Use explicit scoping instead of the default package private level
2169	src/att/grappa/Parser.java	566	Use explicit scoping instead of the default package private level
2170	src/att/grappa/Parser.java	567	Use explicit scoping instead of the default package private level
2171	src/att/grappa/Parser.java	568	Use explicit scoping instead of the default package private level
2172	src/att/grappa/Parser.java	580	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
2173	src/att/grappa/Parser.java	581	Avoid using implementation types like 'Vector'; use the interface instead
2174	src/att/grappa/Parser.java	581	Avoid using implementation types like 'Vector'; use the interface instead
2175	src/att/grappa/Parser.java	581	Consider replacing this Vector with the newer java.util.List
2176	src/att/grappa/Parser.java	581	Use ArrayList instead of Vector
2177	src/att/grappa/Parser.java	582	Avoid using implementation types like 'Vector'; use the interface instead
2178	src/att/grappa/Parser.java	582	Avoid using implementation types like 'Vector'; use the interface instead
2179	src/att/grappa/Parser.java	582	Consider replacing this Vector with the newer java.util.List
2180	src/att/grappa/Parser.java	582	Use ArrayList instead of Vector
2181	src/att/grappa/Parser.java	583	Avoid using implementation types like 'Vector'; use the interface instead
2182	src/att/grappa/Parser.java	583	Avoid using implementation types like 'Vector'; use the interface instead
2183	src/att/grappa/Parser.java	583	Consider replacing this Vector with the newer java.util.List
2184	src/att/grappa/Parser.java	583	Use ArrayList instead of Vector
2185	src/att/grappa/Parser.java	596	A method should have only one exit point, and that should be the last statement in the method
2186	src/att/grappa/Parser.java	598	Avoid using if statements without curly braces
2187	src/att/grappa/Parser.java	598	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
2188	src/att/grappa/Parser.java	599	Found 'DD'-anomaly for variable 'attr' (lines '599'-'601').
2189	src/att/grappa/Parser.java	599	Found 'DU'-anomaly for variable 'attr' (lines '599'-'622').
2190	src/att/grappa/Parser.java	601	Avoid assignments in operands
2191	src/att/grappa/Parser.java	601	Found 'DD'-anomaly for variable 'attr' (lines '601'-'601').
2192	src/att/grappa/Parser.java	601	Found 'DU'-anomaly for variable 'attr' (lines '601'-'622').
2193	src/att/grappa/Parser.java	605	Switch statements should have a default label
2194	src/att/grappa/Parser.java	643	Local variable 'level' could be declared final
2195	src/att/grappa/Parser.java	670	The String literal ")..." appears 5 times in this file; the first occurrence is on line 670
2196	src/att/grappa/Parser.java	675	Avoid assignments in operands
2197	src/att/grappa/Parser.java	681	Found 'DD'-anomaly for variable 'pair' (lines '681'-'682').
2198	src/att/grappa/Parser.java	682	Found 'DD'-anomaly for variable 'pair' (lines '682'-'683').
2199	src/att/grappa/Parser.java	690	Found 'DD'-anomaly for variable 'pair' (lines '690'-'693').
2200	src/att/grappa/Parser.java	690	Found 'DU'-anomaly for variable 'pair' (lines '690'-'699').
2201	src/att/grappa/Parser.java	691	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
2202	src/att/grappa/Parser.java	691	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
2203	src/att/grappa/Parser.java	702	Found 'DD'-anomaly for variable 'pair' (lines '702'-'704').
2204	src/att/grappa/Parser.java	702	Found 'DD'-anomaly for variable 'pair' (lines '702'-'708').
2205	src/att/grappa/Parser.java	702	Found 'DU'-anomaly for variable 'pair' (lines '702'-'716').
2206	src/att/grappa/Parser.java	703	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
2207	src/att/grappa/Parser.java	704	Found 'DD'-anomaly for variable 'pair' (lines '704'-'706').
2208	src/att/grappa/Parser.java	705	Use ArrayList instead of Vector
2209	src/att/grappa/Parser.java	706	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
2210	src/att/grappa/Parser.java	707	Avoid if (x != y) ..; else ..;
2211	src/att/grappa/Parser.java	708	Found 'DD'-anomaly for variable 'pair' (lines '708'-'710').
2212	src/att/grappa/Parser.java	709	Assigning an Object to null is a code smell. Consider refactoring.
2213	src/att/grappa/Parser.java	710	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
2214	src/att/grappa/Parser.java	718	The method 'edgeWrap' has a Cyclomatic Complexity of 10.
2215	src/att/grappa/Parser.java	720	Found 'DD'-anomaly for variable 'key' (lines '720'-'727').
2216	src/att/grappa/Parser.java	720	Found 'DU'-anomaly for variable 'key' (lines '720'-'761').
2217	src/att/grappa/Parser.java	721	Found 'DD'-anomaly for variable 'name' (lines '721'-'731').
2218	src/att/grappa/Parser.java	721	Found 'DU'-anomaly for variable 'name' (lines '721'-'761').
2219	src/att/grappa/Parser.java	722	Found 'DD'-anomaly for variable 'attr' (lines '722'-'725').
2220	src/att/grappa/Parser.java	722	Found 'DU'-anomaly for variable 'attr' (lines '722'-'761').
2221	src/att/grappa/Parser.java	723	Avoid unused local variables such as 'skip'.
2222	src/att/grappa/Parser.java	723	Found 'DU'-anomaly for variable 'skip' (lines '723'-'761').
2223	src/att/grappa/Parser.java	723	Local variable 'skip' could be declared final
2224	src/att/grappa/Parser.java	727	Found 'DD'-anomaly for variable 'key' (lines '727'-'727').
2225	src/att/grappa/Parser.java	727	Found 'DU'-anomaly for variable 'key' (lines '727'-'761').
2226	src/att/grappa/Parser.java	728	Avoid using if statements without curly braces
2227	src/att/grappa/Parser.java	731	Found 'DD'-anomaly for variable 'name' (lines '731'-'731').
2228	src/att/grappa/Parser.java	731	Found 'DU'-anomaly for variable 'name' (lines '731'-'761').
2229	src/att/grappa/Parser.java	732	Avoid using if statements without curly braces
2230	src/att/grappa/Parser.java	736	Found 'DU'-anomaly for variable 'tailPair' (lines '736'-'761').
2231	src/att/grappa/Parser.java	737	Found 'DD'-anomaly for variable 'headPair' (lines '737'-'741').
2232	src/att/grappa/Parser.java	737	Found 'DU'-anomaly for variable 'headPair' (lines '737'-'761').
2233	src/att/grappa/Parser.java	743	Consider replacing this Vector with the newer java.util.List
2234	src/att/grappa/Parser.java	743	Consider replacing this Vector with the newer java.util.List
2235	src/att/grappa/Parser.java	744	Found 'DD'-anomaly for variable 'nodePair' (lines '744'-'744').
2236	src/att/grappa/Parser.java	744	Found 'DD'-anomaly for variable 'nodePair' (lines '744'-'746').
2237	src/att/grappa/Parser.java	744	Found 'DU'-anomaly for variable 'nodePair' (lines '744'-'761').
2238	src/att/grappa/Parser.java	757	Found 'DU'-anomaly for variable 'tailPair' (lines '757'-'761').
2239	src/att/grappa/Parser.java	764	Assigning an Object to null is a code smell. Consider refactoring.
2240	src/att/grappa/Parser.java	764	Found 'DU'-anomaly for variable 'key' (lines '764'-'788').
2241	src/att/grappa/Parser.java	765	Assigning an Object to null is a code smell. Consider refactoring.
2242	src/att/grappa/Parser.java	765	Found 'DU'-anomaly for variable 'name' (lines '765'-'788').
2243	src/att/grappa/Parser.java	768	Found 'DD'-anomaly for variable 'nodePair' (lines '768'-'770').
2244	src/att/grappa/Parser.java	768	Found 'DU'-anomaly for variable 'nodePair' (lines '768'-'788').
2245	src/att/grappa/Parser.java	771	Avoid instantiating new objects inside loops
2246	src/att/grappa/Parser.java	781	Avoid instantiating new objects inside loops
2247	src/att/grappa/Parser.java	791	Found 'DD'-anomaly for variable 'attr' (lines '791'-'793').
2248	src/att/grappa/Parser.java	791	Found 'DU'-anomaly for variable 'attr' (lines '791'-'798').
2249	src/att/grappa/Parser.java	794	Avoid using if...else statements without curly braces
2250	src/att/grappa/Parser.java	794	Use equals() to compare object references.
2251	src/att/grappa/Parser.java	795	Avoid using if statements without curly braces
2252	src/att/grappa/Parser.java	795	Use equals() to compare object references.
2253	src/att/grappa/Parser.java	808	Avoid really long methods.
2254	src/att/grappa/Parser.java	808	Found 'UR'-anomaly for variable 'value' (lines '808'-'962').
2255	src/att/grappa/Parser.java	808	The method 'CUP$Parser$do_action' has a Cyclomatic Complexity of 70.
2256	src/att/grappa/Parser.java	808	The method CUP$Parser$do_action() has an NCSS line count of 385
2257	src/att/grappa/Parser.java	809	Avoid excessively long variable names like CUP$Parser$act_num
2258	src/att/grappa/Parser.java	828	A method should have only one exit point, and that should be the last statement in the method
2259	src/att/grappa/Parser.java	837	A method should have only one exit point, and that should be the last statement in the method
2260	src/att/grappa/Parser.java	846	A method should have only one exit point, and that should be the last statement in the method
2261	src/att/grappa/Parser.java	869	Found 'DD'-anomaly for variable 'RESULT' (lines '869'-'871').
2262	src/att/grappa/Parser.java	891	Found 'DD'-anomaly for variable 'RESULT' (lines '891'-'896').
2263	src/att/grappa/Parser.java	892	Avoid unused local variables such as 'valleft'.
2264	src/att/grappa/Parser.java	892	Found 'DU'-anomaly for variable 'valleft' (lines '892'-'1,565').
2265	src/att/grappa/Parser.java	893	Avoid unused local variables such as 'valright'.
2266	src/att/grappa/Parser.java	893	Found 'DU'-anomaly for variable 'valright' (lines '893'-'1,565').
2267	src/att/grappa/Parser.java	905	Found 'DD'-anomaly for variable 'RESULT' (lines '905'-'908').
2268	src/att/grappa/Parser.java	907	Avoid using if statements without curly braces
2269	src/att/grappa/Parser.java	909	Avoid unused local variables such as 'valleft'.
2270	src/att/grappa/Parser.java	909	Found 'DU'-anomaly for variable 'valleft' (lines '909'-'1,565').
2271	src/att/grappa/Parser.java	910	Avoid unused local variables such as 'valright'.
2272	src/att/grappa/Parser.java	910	Found 'DU'-anomaly for variable 'valright' (lines '910'-'1,565').
2273	src/att/grappa/Parser.java	911	Found 'DU'-anomaly for variable 'val' (lines '911'-'1,565').
2274	src/att/grappa/Parser.java	923	Found 'DU'-anomaly for variable 'valleft' (lines '923'-'1,565').
2275	src/att/grappa/Parser.java	924	Found 'DU'-anomaly for variable 'valright' (lines '924'-'1,565').
2276	src/att/grappa/Parser.java	946	Found 'DU'-anomaly for variable 'nameleft' (lines '946'-'1,565').
2277	src/att/grappa/Parser.java	947	Found 'DU'-anomaly for variable 'nameright' (lines '947'-'1,565').
2278	src/att/grappa/Parser.java	960	Found 'DU'-anomaly for variable 'nameleft' (lines '960'-'1,565').
2279	src/att/grappa/Parser.java	961	Found 'DU'-anomaly for variable 'nameright' (lines '961'-'1,565').
2280	src/att/grappa/Parser.java	963	Found 'DU'-anomaly for variable 'valueleft' (lines '963'-'1,565').
2281	src/att/grappa/Parser.java	964	Found 'DU'-anomaly for variable 'valueright' (lines '964'-'1,565').
2282	src/att/grappa/Parser.java	1059	Assigning an Object to null is a code smell. Consider refactoring.
2283	src/att/grappa/Parser.java	1087	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2284	src/att/grappa/Parser.java	1101	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2285	src/att/grappa/Parser.java	1115	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2286	src/att/grappa/Parser.java	1136	Found 'DU'-anomaly for variable 'typeleft' (lines '1,136'-'1,565').
2287	src/att/grappa/Parser.java	1137	Found 'DU'-anomaly for variable 'typeright' (lines '1,137'-'1,565').
2288	src/att/grappa/Parser.java	1139	Found 'DU'-anomaly for variable 'nameleft' (lines '1,139'-'1,565').
2289	src/att/grappa/Parser.java	1140	Found 'DU'-anomaly for variable 'nameright' (lines '1,140'-'1,565').
2290	src/att/grappa/Parser.java	1154	Assigning an Object to null is a code smell. Consider refactoring.
2291	src/att/grappa/Parser.java	1178	Found 'DU'-anomaly for variable 'nameleft' (lines '1,178'-'1,565').
2292	src/att/grappa/Parser.java	1179	Found 'DU'-anomaly for variable 'nameright' (lines '1,179'-'1,565').
2293	src/att/grappa/Parser.java	1181	Found 'DU'-anomaly for variable 'portleft' (lines '1,181'-'1,565').
2294	src/att/grappa/Parser.java	1182	Found 'DU'-anomaly for variable 'portright' (lines '1,182'-'1,565').
2295	src/att/grappa/Parser.java	1215	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
2296	src/att/grappa/Parser.java	1224	Found 'DD'-anomaly for variable 'RESULT' (lines '1,224'-'1,227').
2297	src/att/grappa/Parser.java	1224	Found 'DD'-anomaly for variable 'RESULT' (lines '1,224'-'1,233').
2298	src/att/grappa/Parser.java	1227	Found 'DD'-anomaly for variable 'RESULT' (lines '1,227'-'1,233').
2299	src/att/grappa/Parser.java	1228	Found 'DU'-anomaly for variable 'valleft' (lines '1,228'-'1,565').
2300	src/att/grappa/Parser.java	1229	Found 'DU'-anomaly for variable 'valright' (lines '1,229'-'1,565').
2301	src/att/grappa/Parser.java	1230	Found 'DU'-anomaly for variable 'val' (lines '1,230'-'1,565').
2302	src/att/grappa/Parser.java	1233	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
2303	src/att/grappa/Parser.java	1305	Avoid using if...else statements without curly braces
2304	src/att/grappa/Parser.java	1306	Avoid using if...else statements without curly braces
2305	src/att/grappa/Parser.java	1405	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
2306	src/att/grappa/Parser.java	1476	Found 'DU'-anomaly for variable 'strictleft' (lines '1,476'-'1,565').
2307	src/att/grappa/Parser.java	1477	Found 'DU'-anomaly for variable 'strictright' (lines '1,477'-'1,565').
2308	src/att/grappa/Parser.java	1479	Found 'DU'-anomaly for variable 'typeleft' (lines '1,479'-'1,565').
2309	src/att/grappa/Parser.java	1480	Found 'DU'-anomaly for variable 'typeright' (lines '1,480'-'1,565').
2310	src/att/grappa/Parser.java	1482	Found 'DU'-anomaly for variable 'nameleft' (lines '1,482'-'1,565').
2311	src/att/grappa/Parser.java	1483	Found 'DU'-anomaly for variable 'nameright' (lines '1,483'-'1,565').
2312	src/att/grappa/Parser.java	1548	Found 'DD'-anomaly for variable 'RESULT' (lines '1,548'-'1,552').
2313	src/att/grappa/Parser.java	1549	Found 'DU'-anomaly for variable 'start_valleft' (lines '1,549'-'1,565').
2314	src/att/grappa/Parser.java	1550	Found 'DU'-anomaly for variable 'start_valright' (lines '1,550'-'1,565').
2315	src/att/grappa/Parser.java	1561	Avoid throwing raw exception types.
2316	src/att/grappa/Subgraph.java	11	This class has a bunch of public methods and attributes
2317	src/att/grappa/Subgraph.java	31	Avoid really long classes.
2318	src/att/grappa/Subgraph.java	31	The class 'Subgraph' has a Cyclomatic Complexity of 6 (Highest = 40).
2319	src/att/grappa/Subgraph.java	33	This class has too many methods, consider refactoring it.
2320	src/att/grappa/Subgraph.java	39	Variables that are final and static should be in all caps.
2321	src/att/grappa/Subgraph.java	42	Consider replacing this Hashtable with the newer java.util.Map
2322	src/att/grappa/Subgraph.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
2323	src/att/grappa/Subgraph.java	43	Consider replacing this Hashtable with the newer java.util.Map
2324	src/att/grappa/Subgraph.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
2325	src/att/grappa/Subgraph.java	44	Consider replacing this Hashtable with the newer java.util.Map
2326	src/att/grappa/Subgraph.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
2327	src/att/grappa/Subgraph.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
2328	src/att/grappa/Subgraph.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
2329	src/att/grappa/Subgraph.java	52	Consider replacing this Hashtable with the newer java.util.Map
2330	src/att/grappa/Subgraph.java	55	Consider replacing this Hashtable with the newer java.util.Map
2331	src/att/grappa/Subgraph.java	69	It is a good practice to call super() in a constructor
2332	src/att/grappa/Subgraph.java	82	Parameter 'name' is not assigned and could be declared final
2333	src/att/grappa/Subgraph.java	82	Parameter 'subg' is not assigned and could be declared final
2334	src/att/grappa/Subgraph.java	84	Overridable method 'setName' called during object construction
2335	src/att/grappa/Subgraph.java	88	Overridable method 'setNodeAttribute' called during object construction
2336	src/att/grappa/Subgraph.java	92	Overridable method 'setEdgeAttribute' called during object construction
2337	src/att/grappa/Subgraph.java	96	Overridable method 'setAttribute' called during object construction
2338	src/att/grappa/Subgraph.java	109	Parameter 'subg' is not assigned and could be declared final
2339	src/att/grappa/Subgraph.java	130	This statement may have some unnecessary parentheses
2340	src/att/grappa/Subgraph.java	141	This statement may have some unnecessary parentheses
2341	src/att/grappa/Subgraph.java	153	Use explicit scoping instead of the default package private level
2342	src/att/grappa/Subgraph.java	154	Found 'DU'-anomaly for variable 'oldName' (lines '154'-'172').
2343	src/att/grappa/Subgraph.java	154	Local variable 'oldName' could be declared final
2344	src/att/grappa/Subgraph.java	171	Assigning an Object to null is a code smell. Consider refactoring.
2345	src/att/grappa/Subgraph.java	183	Parameter 'newName' is not assigned and could be declared final
2346	src/att/grappa/Subgraph.java	186	A method should have only one exit point, and that should be the last statement in the method
2347	src/att/grappa/Subgraph.java	189	Local variable 'oldName' could be declared final
2348	src/att/grappa/Subgraph.java	214	Assigning an Object to null is a code smell. Consider refactoring.
2349	src/att/grappa/Subgraph.java	241	Parameter 'key' is not assigned and could be declared final
2350	src/att/grappa/Subgraph.java	242	A method should have only one exit point, and that should be the last statement in the method
2351	src/att/grappa/Subgraph.java	242	Avoid using if statements without curly braces
2352	src/att/grappa/Subgraph.java	242	This statement may have some unnecessary parentheses
2353	src/att/grappa/Subgraph.java	254	A method should have only one exit point, and that should be the last statement in the method
2354	src/att/grappa/Subgraph.java	254	Avoid using if statements without curly braces
2355	src/att/grappa/Subgraph.java	254	This statement may have some unnecessary parentheses
2356	src/att/grappa/Subgraph.java	255	A method should have only one exit point, and that should be the last statement in the method
2357	src/att/grappa/Subgraph.java	255	Avoid assignments in operands
2358	src/att/grappa/Subgraph.java	255	Avoid using if statements without curly braces
2359	src/att/grappa/Subgraph.java	255	Found 'DU'-anomaly for variable 'attr' (lines '255'-'257').
2360	src/att/grappa/Subgraph.java	255	This statement may have some unnecessary parentheses
2361	src/att/grappa/Subgraph.java	265	A method should have only one exit point, and that should be the last statement in the method
2362	src/att/grappa/Subgraph.java	265	Avoid using if statements without curly braces
2363	src/att/grappa/Subgraph.java	275	Avoid using if statements without curly braces
2364	src/att/grappa/Subgraph.java	288	The method setNodeAttribute() has an NPath complexity of 480
2365	src/att/grappa/Subgraph.java	294	Avoid variables with short names like sg
2366	src/att/grappa/Subgraph.java	294	Local variable 'sg' could be declared final
2367	src/att/grappa/Subgraph.java	295	Assigning an Object to null is a code smell. Consider refactoring.
2368	src/att/grappa/Subgraph.java	295	Local variable 'prntAttr' could be declared final
2369	src/att/grappa/Subgraph.java	296	Use equals() to compare object references.
2370	src/att/grappa/Subgraph.java	302	Found 'DD'-anomaly for variable 'oldValue' (lines '302'-'314').
2371	src/att/grappa/Subgraph.java	302	Found 'DU'-anomaly for variable 'oldValue' (lines '302'-'327').
2372	src/att/grappa/Subgraph.java	303	Found 'DD'-anomaly for variable 'newAttr' (lines '303'-'320').
2373	src/att/grappa/Subgraph.java	303	Found 'DU'-anomaly for variable 'newAttr' (lines '303'-'327').
2374	src/att/grappa/Subgraph.java	305	Use equals() to compare object references.
2375	src/att/grappa/Subgraph.java	320	Found 'DU'-anomaly for variable 'newAttr' (lines '320'-'327').
2376	src/att/grappa/Subgraph.java	324	Avoid instantiating Long objects.Call Long.valueOf() instead
2377	src/att/grappa/Subgraph.java	337	The method 'setNodeAttribute' has a Cyclomatic Complexity of 10.
2378	src/att/grappa/Subgraph.java	337	The method setNodeAttribute() has an NPath complexity of 240
2379	src/att/grappa/Subgraph.java	345	Avoid variables with short names like sg
2380	src/att/grappa/Subgraph.java	345	Local variable 'sg' could be declared final
2381	src/att/grappa/Subgraph.java	346	Assigning an Object to null is a code smell. Consider refactoring.
2382	src/att/grappa/Subgraph.java	355	Found 'DD'-anomaly for variable 'oldValue' (lines '355'-'371').
2383	src/att/grappa/Subgraph.java	355	Found 'DU'-anomaly for variable 'oldValue' (lines '355'-'388').
2384	src/att/grappa/Subgraph.java	357	Use equals() to compare object references.
2385	src/att/grappa/Subgraph.java	371	Found 'DU'-anomaly for variable 'oldValue' (lines '371'-'388').
2386	src/att/grappa/Subgraph.java	385	Avoid instantiating Long objects.Call Long.valueOf() instead
2387	src/att/grappa/Subgraph.java	402	Avoid instantiating Long objects.Call Long.valueOf() instead
2388	src/att/grappa/Subgraph.java	415	The method setEdgeAttribute() has an NPath complexity of 480
2389	src/att/grappa/Subgraph.java	421	Avoid variables with short names like sg
2390	src/att/grappa/Subgraph.java	422	Assigning an Object to null is a code smell. Consider refactoring.
2391	src/att/grappa/Subgraph.java	423	Use equals() to compare object references.
2392	src/att/grappa/Subgraph.java	429	Found 'DD'-anomaly for variable 'oldValue' (lines '429'-'441').
2393	src/att/grappa/Subgraph.java	429	Found 'DU'-anomaly for variable 'oldValue' (lines '429'-'453').
2394	src/att/grappa/Subgraph.java	430	Found 'DD'-anomaly for variable 'newAttr' (lines '430'-'446').
2395	src/att/grappa/Subgraph.java	430	Found 'DU'-anomaly for variable 'newAttr' (lines '430'-'453').
2396	src/att/grappa/Subgraph.java	432	Use equals() to compare object references.
2397	src/att/grappa/Subgraph.java	446	Found 'DU'-anomaly for variable 'newAttr' (lines '446'-'453').
2398	src/att/grappa/Subgraph.java	450	Avoid instantiating Long objects.Call Long.valueOf() instead
2399	src/att/grappa/Subgraph.java	463	The method 'setEdgeAttribute' has a Cyclomatic Complexity of 10.
2400	src/att/grappa/Subgraph.java	463	The method setEdgeAttribute() has an NPath complexity of 240
2401	src/att/grappa/Subgraph.java	471	Avoid variables with short names like sg
2402	src/att/grappa/Subgraph.java	479	Found 'DD'-anomaly for variable 'oldValue' (lines '479'-'492').
2403	src/att/grappa/Subgraph.java	479	Found 'DU'-anomaly for variable 'oldValue' (lines '479'-'509').
2404	src/att/grappa/Subgraph.java	492	Found 'DU'-anomaly for variable 'oldValue' (lines '492'-'509').
2405	src/att/grappa/Subgraph.java	506	Avoid instantiating Long objects.Call Long.valueOf() instead
2406	src/att/grappa/Subgraph.java	536	The method setAttribute() has an NPath complexity of 480
2407	src/att/grappa/Subgraph.java	542	Avoid variables with short names like sg
2408	src/att/grappa/Subgraph.java	550	Found 'DD'-anomaly for variable 'oldValue' (lines '550'-'562').
2409	src/att/grappa/Subgraph.java	550	Found 'DU'-anomaly for variable 'oldValue' (lines '550'-'575').
2410	src/att/grappa/Subgraph.java	551	Found 'DD'-anomaly for variable 'newAttr' (lines '551'-'568').
2411	src/att/grappa/Subgraph.java	551	Found 'DU'-anomaly for variable 'newAttr' (lines '551'-'575').
2412	src/att/grappa/Subgraph.java	568	Found 'DU'-anomaly for variable 'newAttr' (lines '568'-'575').
2413	src/att/grappa/Subgraph.java	586	The method 'setAttribute' has a Cyclomatic Complexity of 19.
2414	src/att/grappa/Subgraph.java	602	Found 'DD'-anomaly for variable 'oldValue' (lines '602'-'617').
2415	src/att/grappa/Subgraph.java	602	Found 'DU'-anomaly for variable 'oldValue' (lines '602'-'645').
2416	src/att/grappa/Subgraph.java	617	Found 'DU'-anomaly for variable 'oldValue' (lines '617'-'645').
2417	src/att/grappa/Subgraph.java	667	Avoid assignments in operands
2418	src/att/grappa/Subgraph.java	667	Found 'DU'-anomaly for variable 'attr' (lines '667'-'669').
2419	src/att/grappa/Subgraph.java	696	The method 'getBoundingBox' has a Cyclomatic Complexity of 18.
2420	src/att/grappa/Subgraph.java	697	Found 'DD'-anomaly for variable 'bbox' (lines '697'-'698').
2421	src/att/grappa/Subgraph.java	698	Avoid assignments in operands
2422	src/att/grappa/Subgraph.java	698	Found 'DD'-anomaly for variable 'bbox' (lines '698'-'702').
2423	src/att/grappa/Subgraph.java	702	Found 'DU'-anomaly for variable 'bbox' (lines '702'-'765').
2424	src/att/grappa/Subgraph.java	703	Found 'DD'-anomaly for variable 'elem' (lines '703'-'706').
2425	src/att/grappa/Subgraph.java	703	Found 'DU'-anomaly for variable 'elem' (lines '703'-'765').
2426	src/att/grappa/Subgraph.java	775	Found 'DD'-anomaly for variable 'elem' (lines '775'-'778').
2427	src/att/grappa/Subgraph.java	775	Found 'DU'-anomaly for variable 'elem' (lines '775'-'783').
2428	src/att/grappa/Subgraph.java	792	Found 'DU'-anomaly for variable 'indent' (lines '792'-'836').
2429	src/att/grappa/Subgraph.java	840	Found 'DU'-anomaly for variable 'indent' (lines '840'-'867').
2430	src/att/grappa/Subgraph.java	841	Found 'DD'-anomaly for variable 'attr' (lines '841'-'846').
2431	src/att/grappa/Subgraph.java	841	Found 'DD'-anomaly for variable 'attr' (lines '841'-'850').
2432	src/att/grappa/Subgraph.java	841	Found 'DD'-anomaly for variable 'attr' (lines '841'-'854').
2433	src/att/grappa/Subgraph.java	842	Found 'DD'-anomaly for variable 'label' (lines '842'-'847').
2434	src/att/grappa/Subgraph.java	842	Found 'DD'-anomaly for variable 'label' (lines '842'-'851').
2435	src/att/grappa/Subgraph.java	842	Found 'DD'-anomaly for variable 'label' (lines '842'-'855').
2436	src/att/grappa/Subgraph.java	844	Switch statements should have a default label
2437	src/att/grappa/Subgraph.java	871	Found 'DU'-anomaly for variable 'indent' (lines '871'-'906').
2438	src/att/grappa/Subgraph.java	875	Found 'DD'-anomaly for variable 'nbr' (lines '875'-'891').
2439	src/att/grappa/Subgraph.java	877	Avoid unused local variables such as 'sg'.
2440	src/att/grappa/Subgraph.java	877	Found 'DU'-anomaly for variable 'sg' (lines '877'-'906').
2441	src/att/grappa/Subgraph.java	878	Found 'DD'-anomaly for variable 'printlist' (lines '878'-'881').
2442	src/att/grappa/Subgraph.java	878	Found 'DU'-anomaly for variable 'printlist' (lines '878'-'906').
2443	src/att/grappa/Subgraph.java	881	Found 'DU'-anomaly for variable 'printlist' (lines '881'-'906').
2444	src/att/grappa/Subgraph.java	889	Found 'DD'-anomaly for variable 'value' (lines '889'-'889').
2445	src/att/grappa/Subgraph.java	889	Found 'DU'-anomaly for variable 'value' (lines '889'-'906').
2446	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'924').
2447	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'926').
2448	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'928').
2449	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'930').
2450	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'932').
2451	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'934').
2452	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'936').
2453	src/att/grappa/Subgraph.java	917	Found 'DD'-anomaly for variable 'convtype' (lines '917'-'938').
2454	src/att/grappa/Subgraph.java	917	Found 'DU'-anomaly for variable 'convtype' (lines '917'-'945').
2455	src/att/grappa/Subgraph.java	949	Found 'DD'-anomaly for variable 'attr' (lines '949'-'953').
2456	src/att/grappa/Subgraph.java	949	Found 'DD'-anomaly for variable 'attr' (lines '949'-'961').
2457	src/att/grappa/Subgraph.java	949	Found 'DD'-anomaly for variable 'attr' (lines '949'-'969').
2458	src/att/grappa/Subgraph.java	949	Found 'DU'-anomaly for variable 'attr' (lines '949'-'978').
2459	src/att/grappa/Subgraph.java	950	Found 'DU'-anomaly for variable 'subg' (lines '950'-'978').
2460	src/att/grappa/Subgraph.java	951	Switch statements should have a default label
2461	src/att/grappa/Subgraph.java	953	Avoid assignments in operands
2462	src/att/grappa/Subgraph.java	953	Found 'DD'-anomaly for variable 'attr' (lines '953'-'953').
2463	src/att/grappa/Subgraph.java	961	Avoid assignments in operands
2464	src/att/grappa/Subgraph.java	961	Found 'DD'-anomaly for variable 'attr' (lines '961'-'961').
2465	src/att/grappa/Subgraph.java	969	Found 'DD'-anomaly for variable 'attr' (lines '969'-'969').
2466	src/att/grappa/Subgraph.java	1001	Found 'DD'-anomaly for variable 'elem' (lines '1,001'-'1,005').
2467	src/att/grappa/Subgraph.java	1001	Found 'DD'-anomaly for variable 'elem' (lines '1,001'-'1,008').
2468	src/att/grappa/Subgraph.java	1001	Found 'DD'-anomaly for variable 'elem' (lines '1,001'-'1,011').
2469	src/att/grappa/Subgraph.java	1003	Switch statements should have a default label
2470	src/att/grappa/Subgraph.java	1019	Found 'DD'-anomaly for variable 'elem' (lines '1,019'-'1,019').
2471	src/att/grappa/Subgraph.java	1088	Found 'DD'-anomaly for variable 'elem' (lines '1,088'-'1,102').
2472	src/att/grappa/Subgraph.java	1088	Found 'DD'-anomaly for variable 'elem' (lines '1,088'-'1,125').
2473	src/att/grappa/Subgraph.java	1088	Found 'DD'-anomaly for variable 'elem' (lines '1,088'-'1,138').
2474	src/att/grappa/Subgraph.java	1088	Found 'DU'-anomaly for variable 'elem' (lines '1,088'-'1,144').
2475	src/att/grappa/Subgraph.java	1092	Found 'DD'-anomaly for variable 'nodeName' (lines '1,092'-'1,094').
2476	src/att/grappa/Subgraph.java	1111	Found 'DD'-anomaly for variable 'tailPort' (lines '1,111'-'1,114').
2477	src/att/grappa/Subgraph.java	1112	Found 'DD'-anomaly for variable 'key' (lines '1,112'-'1,116').
2478	src/att/grappa/Subgraph.java	1128	Found 'DD'-anomaly for variable 'subgName' (lines '1,128'-'1,130').
2479	src/att/grappa/Subgraph.java	1257	A getX() method which returns a boolean should be named isX()
2480	src/att/grappa/Subgraph.java	1266	A getX() method which returns a boolean should be named isX()
2481	src/att/grappa/Subgraph.java	1275	A getX() method which returns a boolean should be named isX()
2482	src/att/grappa/Subgraph.java	1291	Position literals first in String comparisons
2483	src/att/grappa/Subgraph.java	1303	Avoid throwing raw exception types.
2484	src/att/grappa/Subgraph.java	1305	Found 'DD'-anomaly for variable 'attr' (lines '1,305'-'1,309').
2485	src/att/grappa/Subgraph.java	1305	Found 'DD'-anomaly for variable 'attr' (lines '1,305'-'1,312').
2486	src/att/grappa/Subgraph.java	1305	Found 'DD'-anomaly for variable 'attr' (lines '1,305'-'1,315').
2487	src/att/grappa/Subgraph.java	1307	Switch statements should have a default label
2488	src/att/grappa/Subgraph.java	1321	Switch statements should have a default label
2489	src/att/grappa/Subgraph.java	1354	Found 'DD'-anomaly for variable 'attr' (lines '1,354'-'1,358').
2490	src/att/grappa/Subgraph.java	1354	Found 'DD'-anomaly for variable 'attr' (lines '1,354'-'1,361').
2491	src/att/grappa/Subgraph.java	1354	Found 'DD'-anomaly for variable 'attr' (lines '1,354'-'1,364').
2492	src/att/grappa/Subgraph.java	1380	Found 'DD'-anomaly for variable 'attr' (lines '1,380'-'1,384').
2493	src/att/grappa/Subgraph.java	1380	Found 'DD'-anomaly for variable 'attr' (lines '1,380'-'1,387').
2494	src/att/grappa/Subgraph.java	1380	Found 'DD'-anomaly for variable 'attr' (lines '1,380'-'1,390').
2495	src/att/grappa/Subgraph.java	1404	Found 'DD'-anomaly for variable 'attr' (lines '1,404'-'1,408').
2496	src/att/grappa/Subgraph.java	1404	Found 'DD'-anomaly for variable 'attr' (lines '1,404'-'1,411').
2497	src/att/grappa/Subgraph.java	1404	Found 'DD'-anomaly for variable 'attr' (lines '1,404'-'1,414').
2498	src/att/grappa/Subgraph.java	1430	Found 'DD'-anomaly for variable 'attr' (lines '1,430'-'1,434').
2499	src/att/grappa/Subgraph.java	1430	Found 'DD'-anomaly for variable 'attr' (lines '1,430'-'1,437').
2500	src/att/grappa/Subgraph.java	1430	Found 'DD'-anomaly for variable 'attr' (lines '1,430'-'1,440').
2501	src/att/grappa/Subgraph.java	1545	Private field 'PATCHEDGE' could be made final; it is only initialized in the declaration or constructor.
2502	src/att/grappa/Subgraph.java	1545	The field name indicates a constant but its modifiers do not
2503	src/att/grappa/Subgraph.java	1545	Variables should start with a lowercase character
2504	src/att/grappa/Subgraph.java	1546	Private field 'PATCHEDGE2' could be made final; it is only initialized in the declaration or constructor.
2505	src/att/grappa/Subgraph.java	1546	The field name indicates a constant but its modifiers do not
2506	src/att/grappa/Subgraph.java	1546	Variables should start with a lowercase character
2507	src/att/grappa/Subgraph.java	1549	Avoid unused private fields such as 'patch'.
2508	src/att/grappa/Subgraph.java	1549	Private field 'patch' could be made final; it is only initialized in the declaration or constructor.
2509	src/att/grappa/Subgraph.java	1576	Found 'DU'-anomaly for variable 'sgtot' (lines '1,576'-'1,596').
2510	src/att/grappa/Subgraph.java	1577	Found 'DU'-anomaly for variable 'nbr' (lines '1,577'-'1,596').
2511	src/att/grappa/Subgraph.java	1613	Use explicit scoping instead of the default package private level
2512	src/att/grappa/Subgraph.java	1614	Returning 'elPatches' may expose an internal array.
2513	src/att/grappa/Subgraph.java	1619	Avoid unused local variables such as 'dict'.
2514	src/att/grappa/Subgraph.java	1637	Avoid using if...else statements without curly braces
2515	src/att/grappa/Subgraph.java	1639	Avoid instantiating new objects inside loops
2516	src/att/grappa/Subgraph.java	1688	Found 'DD'-anomaly for variable 'm' (lines '1,688'-'1,708').
2517	src/att/grappa/Subgraph.java	1688	Found 'DD'-anomaly for variable 'm' (lines '1,688'-'1,709').
2518	src/att/grappa/Subgraph.java	1691	Avoid using if...else statements without curly braces
2519	src/att/grappa/Subgraph.java	1693	Avoid using if...else statements without curly braces
2520	src/att/grappa/Subgraph.java	1703	Avoid if (x != y) ..; else ..;
2521	src/att/grappa/Subgraph.java	1703	Found 'DU'-anomaly for variable 'obj' (lines '1,703'-'1,733').
2522	src/att/grappa/Subgraph.java	1708	Avoid using if...else statements without curly braces
2523	src/att/grappa/Subgraph.java	1708	Found 'DD'-anomaly for variable 'm' (lines '1,708'-'1,708').
2524	src/att/grappa/Subgraph.java	1709	Avoid using if...else statements without curly braces
2525	src/att/grappa/Subgraph.java	1736	Use explicit scoping instead of the default package private level
2526	src/att/grappa/Subgraph.java	1737	Use explicit scoping instead of the default package private level
2527	src/att/grappa/Subgraph.java	1747	Avoid really long methods.
2528	src/att/grappa/Subgraph.java	1747	The method compSqPatchWork() has an NCSS line count of 191
2529	src/att/grappa/Subgraph.java	1759	Avoid unused local variables such as 'pp'.
2530	src/att/grappa/Subgraph.java	1838	Avoid instantiating new objects inside loops
2531	src/att/grappa/Subgraph.java	1840	Avoid instantiating new objects inside loops
2532	src/att/grappa/Subgraph.java	1850	Avoid instantiating new objects inside loops
2533	src/att/grappa/Subgraph.java	1852	Avoid instantiating new objects inside loops
2534	src/att/grappa/Subgraph.java	1923	The String literal "filled,lineColor(black)" appears 6 times in this file; the first occurrence is on line 1,923
2535	src/att/grappa/Subgraph.java	2143	Private field 'root' could be made final; it is only initialized in the declaration or constructor.
2536	src/att/grappa/Subgraph.java	2144	Private field 'types' could be made final; it is only initialized in the declaration or constructor.
2537	src/att/grappa/Subgraph.java	2154	Avoid if (x != y) ..; else ..;
2538	src/att/grappa/Subgraph.java	2177	Overridable method 'hasMoreElements' called during object construction
2539	src/att/grappa/Subgraph.java	2223	These nested if statements could be combined
2540	src/att/grappa/Subgraph.java	2276	Avoid using implementation types like 'Vector'; use the interface instead
2541	src/att/grappa/Subgraph.java	2276	Avoid using implementation types like 'Vector'; use the interface instead
2542	src/att/grappa/Subgraph.java	2276	Consider replacing this Vector with the newer java.util.List
2543	src/att/grappa/Subgraph.java	2277	Consider replacing this Vector with the newer java.util.List
2544	src/att/grappa/Subgraph.java	2277	Use ArrayList instead of Vector
2545	src/att/grappa/Subgraph.java	2310	Avoid reassigning parameters such as 'count'
2546	src/att/grappa/Subgraph.java	2310	Avoid reassigning parameters such as 'count'
2547	src/att/grappa/Subgraph.java	2310	Avoid reassigning parameters such as 'count'
2548	src/att/grappa/Subgraph.java	2310	Avoid using implementation types like 'Vector'; use the interface instead
2549	src/att/grappa/Subgraph.java	2310	Avoid using implementation types like 'Vector'; use the interface instead
2550	src/att/grappa/Subgraph.java	2310	Consider replacing this Vector with the newer java.util.List
2551	src/att/grappa/Subgraph.java	2310	Use explicit scoping instead of the default package private level
2552	src/att/grappa/Symbols.java	10	Each class should declare at least one constructor
2553	src/att/grappa/Symbols.java	30	Variables that are final and static should be in all caps.
2554	src/att/grappa/Symbols.java	36	Use explicit scoping instead of the default package private level
2555	src/att/grappa/Symbols.java	36	Variables that are final and static should be in all caps.
2556	src/att/grappa/Symbols.java	37	Use explicit scoping instead of the default package private level
2557	src/att/grappa/Symbols.java	37	Variables that are final and static should be in all caps.
2558	src/att/grappa/Symbols.java	38	Use explicit scoping instead of the default package private level
2559	src/att/grappa/Symbols.java	38	Variables that are final and static should be in all caps.
2560	src/att/grappa/Symbols.java	39	Use explicit scoping instead of the default package private level
2561	src/att/grappa/Symbols.java	39	Variables that are final and static should be in all caps.
2562	src/att/grappa/Symbols.java	40	Use explicit scoping instead of the default package private level
2563	src/att/grappa/Symbols.java	45	Avoid using dollar signs in variable/method/class/interface names
2564	src/att/grappa/Symbols.java	46	Avoid using dollar signs in variable/method/class/interface names
2565	src/att/grappa/Symbols.java	47	Avoid using dollar signs in variable/method/class/interface names
2566	src/att/grappa/Symbols.java	49	Avoid using dollar signs in variable/method/class/interface names
2567	src/circularbuffers/BufferOverflowException.java	46	Parameter 'msg' is not assigned and could be declared final
2568	src/circularbuffers/CircularByteBuffer.java	43	This class has too many methods, consider refactoring it.
2569	src/circularbuffers/CircularByteBuffer.java	81	Found non-transient, non-static member. Please mark as transient or provide accessors.
2570	src/circularbuffers/CircularByteBuffer.java	87	Found non-transient, non-static member. Please mark as transient or provide accessors.
2571	src/circularbuffers/CircularByteBuffer.java	87	Use of modifier volatile is not recommended.
2572	src/circularbuffers/CircularByteBuffer.java	93	Found non-transient, non-static member. Please mark as transient or provide accessors.
2573	src/circularbuffers/CircularByteBuffer.java	93	Use of modifier volatile is not recommended.
2574	src/circularbuffers/CircularByteBuffer.java	99	Found non-transient, non-static member. Please mark as transient or provide accessors.
2575	src/circularbuffers/CircularByteBuffer.java	99	Use of modifier volatile is not recommended.
2576	src/circularbuffers/CircularByteBuffer.java	106	Found non-transient, non-static member. Please mark as transient or provide accessors.
2577	src/circularbuffers/CircularByteBuffer.java	106	Use of modifier volatile is not recommended.
2578	src/circularbuffers/CircularByteBuffer.java	112	Use of modifier volatile is not recommended.
2579	src/circularbuffers/CircularByteBuffer.java	125	Avoid variables with short names like in
2580	src/circularbuffers/CircularByteBuffer.java	143	Avoid excessively long variable names like outputStreamClosed
2581	src/circularbuffers/CircularByteBuffer.java	257	Local variable 'newBuffer' could be declared final
2582	src/circularbuffers/CircularByteBuffer.java	258	Local variable 'marked' could be declared final
2583	src/circularbuffers/CircularByteBuffer.java	259	Local variable 'available' could be declared final
2584	src/circularbuffers/CircularByteBuffer.java	264	Local variable 'length' could be declared final
2585	src/circularbuffers/CircularByteBuffer.java	267	Local variable 'length1' could be declared final
2586	src/circularbuffers/CircularByteBuffer.java	288	A method should have only one exit point, and that should be the last statement in the method
2587	src/circularbuffers/CircularByteBuffer.java	305	A method should have only one exit point, and that should be the last statement in the method
2588	src/circularbuffers/CircularByteBuffer.java	322	A method should have only one exit point, and that should be the last statement in the method
2589	src/circularbuffers/CircularByteBuffer.java	370	Parameter 'size' is not assigned and could be declared final
2590	src/circularbuffers/CircularByteBuffer.java	384	Parameter 'blockingWrite' is not assigned and could be declared final
2591	src/circularbuffers/CircularByteBuffer.java	407	Parameter 'blockingWrite' is not assigned and could be declared final
2592	src/circularbuffers/CircularByteBuffer.java	407	Parameter 'size' is not assigned and could be declared final
2593	src/circularbuffers/CircularByteBuffer.java	437	Avoid using if statements without curly braces
2594	src/circularbuffers/CircularByteBuffer.java	438	This statement may have some unnecessary parentheses
2595	src/circularbuffers/CircularByteBuffer.java	470	Parameter 'readAheadLimit' is not assigned and could be declared final
2596	src/circularbuffers/CircularByteBuffer.java	505	Avoid using if statements without curly braces
2597	src/circularbuffers/CircularByteBuffer.java	514	A method should have only one exit point, and that should be the last statement in the method
2598	src/circularbuffers/CircularByteBuffer.java	522	New exception is thrown in catch block, original stack trace may be lost
2599	src/circularbuffers/CircularByteBuffer.java	560	Avoid using if statements without curly braces
2600	src/circularbuffers/CircularByteBuffer.java	577	A method should have only one exit point, and that should be the last statement in the method
2601	src/circularbuffers/CircularByteBuffer.java	585	New exception is thrown in catch block, original stack trace may be lost
2602	src/circularbuffers/CircularByteBuffer.java	602	Avoid using if statements without curly braces
2603	src/circularbuffers/CircularByteBuffer.java	619	Avoid variables with short names like n
2604	src/circularbuffers/CircularByteBuffer.java	622	Avoid using if statements without curly braces
2605	src/circularbuffers/CircularByteBuffer.java	644	New exception is thrown in catch block, original stack trace may be lost
2606	src/circularbuffers/CircularByteBuffer.java	658	The class 'CircularByteBufferOutputStream' has a Cyclomatic Complexity of 6 (Highest = 13).
2607	src/circularbuffers/CircularByteBuffer.java	726	Avoid reassigning parameters such as 'len'
2608	src/circularbuffers/CircularByteBuffer.java	726	Avoid reassigning parameters such as 'off'
2609	src/circularbuffers/CircularByteBuffer.java	726	The method 'write' has a Cyclomatic Complexity of 13.
2610	src/circularbuffers/CircularByteBuffer.java	726	The method write() has an NPath complexity of 865
2611	src/circularbuffers/CircularByteBuffer.java	760	New exception is thrown in catch block, original stack trace may be lost
2612	src/circularbuffers/CircularByteBuffer.java	780	Avoid variables with short names like c
2613	src/circularbuffers/CircularByteBuffer.java	780	The method 'write' has a Cyclomatic Complexity of 12.
2614	src/circularbuffers/CircularByteBuffer.java	780	The method write() has an NPath complexity of 325
2615	src/circularbuffers/CircularByteBuffer.java	805	New exception is thrown in catch block, original stack trace may be lost
2616	src/flanagan/complex/Complex.java	36	This class has a bunch of public methods and attributes
2617	src/flanagan/complex/Complex.java	40	Avoid really long classes.
2618	src/flanagan/complex/Complex.java	40	The class 'Complex' has a Cyclomatic Complexity of 2 (Highest = 12).
2619	src/flanagan/complex/Complex.java	40	This class has too many methods, consider refactoring it.
2620	src/flanagan/complex/Complex.java	67	Parameter 'imag' is not assigned and could be declared final
2621	src/flanagan/complex/Complex.java	67	Parameter 'real' is not assigned and could be declared final
2622	src/flanagan/complex/Complex.java	74	Parameter 'real' is not assigned and could be declared final
2623	src/flanagan/complex/Complex.java	81	Avoid variables with short names like c
2624	src/flanagan/complex/Complex.java	81	Parameter 'c' is not assigned and could be declared final
2625	src/flanagan/complex/Complex.java	93	Parameter 'real' is not assigned and could be declared final
2626	src/flanagan/complex/Complex.java	131	Use block level rather than method level synchronization
2627	src/flanagan/complex/Complex.java	133	Avoid variables with short names like ch
2628	src/flanagan/complex/Complex.java	133	Found 'DD'-anomaly for variable 'ch' (lines '133'-'142').
2629	src/flanagan/complex/Complex.java	133	Found 'DU'-anomaly for variable 'ch' (lines '133'-'153').
2630	src/flanagan/complex/Complex.java	134	Found 'DD'-anomaly for variable 'cstring' (lines '134'-'146').
2631	src/flanagan/complex/Complex.java	137	System.out.print is used
2632	src/flanagan/complex/Complex.java	144	Avoid using if...else statements without curly braces
2633	src/flanagan/complex/Complex.java	144	Found 'DD'-anomaly for variable 'done' (lines '144'-'149').
2634	src/flanagan/complex/Complex.java	146	Avoid using if...else statements without curly braces
2635	src/flanagan/complex/Complex.java	146	Prefer StringBuffer over += for concatenating strings
2636	src/flanagan/complex/Complex.java	160	Use block level rather than method level synchronization
2637	src/flanagan/complex/Complex.java	162	Avoid variables with short names like ch
2638	src/flanagan/complex/Complex.java	162	Found 'DD'-anomaly for variable 'ch' (lines '162'-'172').
2639	src/flanagan/complex/Complex.java	162	Found 'DU'-anomaly for variable 'ch' (lines '162'-'190').
2640	src/flanagan/complex/Complex.java	163	Found 'DD'-anomaly for variable 'cstring' (lines '163'-'175').
2641	src/flanagan/complex/Complex.java	163	Found 'DD'-anomaly for variable 'cstring' (lines '163'-'181').
2642	src/flanagan/complex/Complex.java	166	System.out.print is used
2643	src/flanagan/complex/Complex.java	169	Avoid variables with short names like i
2644	src/flanagan/complex/Complex.java	169	Found 'DD'-anomaly for variable 'i' (lines '169'-'182').
2645	src/flanagan/complex/Complex.java	169	Found 'DU'-anomaly for variable 'i' (lines '169'-'190').
2646	src/flanagan/complex/Complex.java	175	Found 'DD'-anomaly for variable 'cstring' (lines '175'-'175').
2647	src/flanagan/complex/Complex.java	175	Found 'DD'-anomaly for variable 'cstring' (lines '175'-'181').
2648	src/flanagan/complex/Complex.java	176	Avoid using if statements without curly braces
2649	src/flanagan/complex/Complex.java	176	Found 'DD'-anomaly for variable 'ch' (lines '176'-'172').
2650	src/flanagan/complex/Complex.java	176	Found 'DU'-anomaly for variable 'ch' (lines '176'-'190').
2651	src/flanagan/complex/Complex.java	178	Found 'DD'-anomaly for variable 'done' (lines '178'-'186').
2652	src/flanagan/complex/Complex.java	181	Prefer StringBuffer over += for concatenating strings
2653	src/flanagan/complex/Complex.java	182	Found 'DD'-anomaly for variable 'i' (lines '182'-'182').
2654	src/flanagan/complex/Complex.java	182	Found 'DU'-anomaly for variable 'i' (lines '182'-'190').
2655	src/flanagan/complex/Complex.java	197	Use block level rather than method level synchronization
2656	src/flanagan/complex/Complex.java	199	Avoid variables with short names like ch
2657	src/flanagan/complex/Complex.java	199	Found 'DD'-anomaly for variable 'ch' (lines '199'-'209').
2658	src/flanagan/complex/Complex.java	199	Found 'DU'-anomaly for variable 'ch' (lines '199'-'227').
2659	src/flanagan/complex/Complex.java	200	Found 'DD'-anomaly for variable 'cstring' (lines '200'-'218').
2660	src/flanagan/complex/Complex.java	200	Found 'DU'-anomaly for variable 'cstring' (lines '200'-'227').
2661	src/flanagan/complex/Complex.java	203	System.out.print is used
2662	src/flanagan/complex/Complex.java	206	Found 'DD'-anomaly for variable 'i' (lines '206'-'219').
2663	src/flanagan/complex/Complex.java	206	Found 'DU'-anomaly for variable 'i' (lines '206'-'227').
2664	src/flanagan/complex/Complex.java	212	Avoid using if statements without curly braces
2665	src/flanagan/complex/Complex.java	212	Found 'DU'-anomaly for variable 'ch' (lines '212'-'227').
2666	src/flanagan/complex/Complex.java	213	A method should have only one exit point, and that should be the last statement in the method
2667	src/flanagan/complex/Complex.java	215	Found 'DD'-anomaly for variable 'done' (lines '215'-'223').
2668	src/flanagan/complex/Complex.java	218	Prefer StringBuffer over += for concatenating strings
2669	src/flanagan/complex/Complex.java	219	Found 'DD'-anomaly for variable 'i' (lines '219'-'219').
2670	src/flanagan/complex/Complex.java	219	Found 'DU'-anomaly for variable 'i' (lines '219'-'227').
2671	src/flanagan/complex/Complex.java	235	Use block level rather than method level synchronization
2672	src/flanagan/complex/Complex.java	237	Found 'DD'-anomaly for variable 'ch' (lines '237'-'246').
2673	src/flanagan/complex/Complex.java	237	Found 'DU'-anomaly for variable 'ch' (lines '237'-'257').
2674	src/flanagan/complex/Complex.java	238	Found 'DD'-anomaly for variable 'cstring' (lines '238'-'250').
2675	src/flanagan/complex/Complex.java	241	System.out.print is used
2676	src/flanagan/complex/Complex.java	248	Avoid using if...else statements without curly braces
2677	src/flanagan/complex/Complex.java	248	Found 'DD'-anomaly for variable 'done' (lines '248'-'253').
2678	src/flanagan/complex/Complex.java	250	Avoid using if...else statements without curly braces
2679	src/flanagan/complex/Complex.java	250	Prefer StringBuffer over += for concatenating strings
2680	src/flanagan/complex/Complex.java	262	System.out.print is used
2681	src/flanagan/complex/Complex.java	317	A method should have only one exit point, and that should be the last statement in the method
2682	src/flanagan/complex/Complex.java	317	Avoid using if statements without curly braces
2683	src/flanagan/complex/Complex.java	319	Found 'DD'-anomaly for variable 'xR' (lines '319'-'323').
2684	src/flanagan/complex/Complex.java	320	Found 'DD'-anomaly for variable 'xI' (lines '320'-'324').
2685	src/flanagan/complex/Complex.java	321	Local variable 'y' could be declared final
2686	src/flanagan/complex/Complex.java	333	A method should have only one exit point, and that should be the last statement in the method
2687	src/flanagan/complex/Complex.java	333	Avoid using if statements without curly braces
2688	src/flanagan/complex/Complex.java	335	Found 'DD'-anomaly for variable 'xR' (lines '335'-'339').
2689	src/flanagan/complex/Complex.java	336	Found 'DD'-anomaly for variable 'xI' (lines '336'-'340').
2690	src/flanagan/complex/Complex.java	337	Local variable 'y' could be declared final
2691	src/flanagan/complex/Complex.java	355	Found 'DD'-anomaly for variable 'ch' (lines '355'-'356').
2692	src/flanagan/complex/Complex.java	356	Avoid using if statements without curly braces
2693	src/flanagan/complex/Complex.java	363	Found 'DD'-anomaly for variable 'ch' (lines '363'-'364').
2694	src/flanagan/complex/Complex.java	388	Avoid reassigning parameters such as 'ss'
2695	src/flanagan/complex/Complex.java	388	Avoid reassigning parameters such as 'ss'
2696	src/flanagan/complex/Complex.java	389	Found 'DU'-anomaly for variable 'aa' (lines '389'-'421').
2697	src/flanagan/complex/Complex.java	389	Local variable 'aa' could be declared final
2698	src/flanagan/complex/Complex.java	391	Found 'DD'-anomaly for variable 'first' (lines '391'-'393').
2699	src/flanagan/complex/Complex.java	391	Found 'DU'-anomaly for variable 'first' (lines '391'-'421').
2700	src/flanagan/complex/Complex.java	393	Found 'DU'-anomaly for variable 'first' (lines '393'-'421').
2701	src/flanagan/complex/Complex.java	403	Found 'DD'-anomaly for variable 'imagSign' (lines '403'-'408').
2702	src/flanagan/complex/Complex.java	403	Found 'DU'-anomaly for variable 'imagSign' (lines '403'-'421').
2703	src/flanagan/complex/Complex.java	408	Found 'DU'-anomaly for variable 'imagSign' (lines '408'-'421').
2704	src/flanagan/complex/Complex.java	412	Local variable 'r0' could be declared final
2705	src/flanagan/complex/Complex.java	413	Local variable 'r1' could be declared final
2706	src/flanagan/complex/Complex.java	446	Found 'DD'-anomaly for variable 'a' (lines '446'-'448').
2707	src/flanagan/complex/Complex.java	448	Found 'DD'-anomaly for variable 'a' (lines '448'-'448').
2708	src/flanagan/complex/Complex.java	456	Found 'DD'-anomaly for variable 'c' (lines '456'-'458').
2709	src/flanagan/complex/Complex.java	467	Found 'DD'-anomaly for variable 'sum' (lines '467'-'469').
2710	src/flanagan/complex/Complex.java	477	Found 'DD'-anomaly for variable 'c' (lines '477'-'479').
2711	src/flanagan/complex/Complex.java	479	Found 'DD'-anomaly for variable 'c' (lines '479'-'479').
2712	src/flanagan/complex/Complex.java	487	Found 'DD'-anomaly for variable 'a' (lines '487'-'490').
2713	src/flanagan/complex/Complex.java	490	Found 'DD'-anomaly for variable 'a' (lines '490'-'490').
2714	src/flanagan/complex/Complex.java	499	Found 'DD'-anomaly for variable 'c' (lines '499'-'502').
2715	src/flanagan/complex/Complex.java	512	Found 'DD'-anomaly for variable 'c' (lines '512'-'515').
2716	src/flanagan/complex/Complex.java	515	Found 'DD'-anomaly for variable 'c' (lines '515'-'515').
2717	src/flanagan/complex/Complex.java	524	Found 'DD'-anomaly for variable 'a' (lines '524'-'528').
2718	src/flanagan/complex/Complex.java	528	Found 'DD'-anomaly for variable 'a' (lines '528'-'528').
2719	src/flanagan/complex/Complex.java	538	Found 'DD'-anomaly for variable 'c' (lines '538'-'542').
2720	src/flanagan/complex/Complex.java	553	Found 'DD'-anomaly for variable 'c' (lines '553'-'557').
2721	src/flanagan/complex/Complex.java	557	Found 'DD'-anomaly for variable 'c' (lines '557'-'557').
2722	src/flanagan/complex/Complex.java	568	A method should have only one exit point, and that should be the last statement in the method
2723	src/flanagan/complex/Complex.java	581	A method should have only one exit point, and that should be the last statement in the method
2724	src/flanagan/complex/Complex.java	600	Found 'DD'-anomaly for variable 'b' (lines '600'-'602').
2725	src/flanagan/complex/Complex.java	602	Found 'DD'-anomaly for variable 'b' (lines '602'-'602').
2726	src/flanagan/complex/Complex.java	616	Found 'DD'-anomaly for variable 'b' (lines '616'-'619').
2727	src/flanagan/complex/Complex.java	619	Found 'DD'-anomaly for variable 'b' (lines '619'-'619').
2728	src/flanagan/complex/Complex.java	635	Found 'DD'-anomaly for variable 'b' (lines '635'-'639').
2729	src/flanagan/complex/Complex.java	639	Found 'DD'-anomaly for variable 'b' (lines '639'-'639').
2730	src/flanagan/complex/Complex.java	650	Object clone() should be implemented with super.clone()
2731	src/flanagan/complex/Complex.java	650	clone() method should be implemented only if implementing Cloneable interface
2732	src/flanagan/complex/Complex.java	650	clone() method should be implemented only if implementing Cloneable interface
2733	src/flanagan/complex/Complex.java	650	clone() method should throw CloneNotSupportedException
2734	src/flanagan/complex/Complex.java	651	Found 'DD'-anomaly for variable 'ret' (lines '651'-'657').
2735	src/flanagan/complex/Complex.java	818	A getX() method which returns a boolean should be named isX()
2736	src/flanagan/complex/Complex.java	825	Do not use if statements that are always true or always false
2737	src/flanagan/complex/Complex.java	844	Do not use if statements that are always true or always false
2738	src/flanagan/complex/Complex.java	862	Do not use if statements that are always true or always false
2739	src/flanagan/complex/Complex.java	890	Do not use if statements that are always true or always false
2740	src/flanagan/complex/Complex.java	910	Do not use if statements that are always true or always false
2741	src/flanagan/complex/Complex.java	928	Found 'DU'-anomaly for variable 'b' (lines '928'-'943').
2742	src/flanagan/complex/Complex.java	929	Found 'DD'-anomaly for variable 'test' (lines '929'-'934').
2743	src/flanagan/complex/Complex.java	931	These nested if statements could be combined
2744	src/flanagan/complex/Complex.java	947	Found 'DD'-anomaly for variable 'test' (lines '947'-'952').
2745	src/flanagan/complex/Complex.java	949	These nested if statements could be combined
2746	src/flanagan/complex/Complex.java	968	Found 'DD'-anomaly for variable 'denom' (lines '968'-'982').
2747	src/flanagan/complex/Complex.java	968	Found 'DD'-anomaly for variable 'denom' (lines '968'-'988').
2748	src/flanagan/complex/Complex.java	968	Found 'DD'-anomaly for variable 'ratio' (lines '968'-'981').
2749	src/flanagan/complex/Complex.java	968	Found 'DD'-anomaly for variable 'ratio' (lines '968'-'987').
2750	src/flanagan/complex/Complex.java	968	Found 'DU'-anomaly for variable 'denom' (lines '968'-'994').
2751	src/flanagan/complex/Complex.java	968	Found 'DU'-anomaly for variable 'ratio' (lines '968'-'994').
2752	src/flanagan/complex/Complex.java	1054	Found 'DD'-anomaly for variable 'denom' (lines '1,054'-'1,057').
2753	src/flanagan/complex/Complex.java	1054	Found 'DD'-anomaly for variable 'denom' (lines '1,054'-'1,064').
2754	src/flanagan/complex/Complex.java	1054	Found 'DD'-anomaly for variable 'ratio' (lines '1,054'-'1,056').
2755	src/flanagan/complex/Complex.java	1054	Found 'DD'-anomaly for variable 'ratio' (lines '1,054'-'1,063').
2756	src/flanagan/complex/Complex.java	1087	Found 'DD'-anomaly for variable 'denom' (lines '1,087'-'1,090').
2757	src/flanagan/complex/Complex.java	1087	Found 'DD'-anomaly for variable 'denom' (lines '1,087'-'1,097').
2758	src/flanagan/complex/Complex.java	1087	Found 'DD'-anomaly for variable 'ratio' (lines '1,087'-'1,089').
2759	src/flanagan/complex/Complex.java	1087	Found 'DD'-anomaly for variable 'ratio' (lines '1,087'-'1,096').
2760	src/flanagan/complex/Complex.java	1106	Found 'DU'-anomaly for variable 'c' (lines '1,106'-'1,132').
2761	src/flanagan/complex/Complex.java	1108	Found 'DD'-anomaly for variable 'test' (lines '1,108'-'1,112').
2762	src/flanagan/complex/Complex.java	1115	Found 'DD'-anomaly for variable 'denom' (lines '1,115'-'1,118').
2763	src/flanagan/complex/Complex.java	1115	Found 'DD'-anomaly for variable 'denom' (lines '1,115'-'1,125').
2764	src/flanagan/complex/Complex.java	1115	Found 'DD'-anomaly for variable 'ratio' (lines '1,115'-'1,117').
2765	src/flanagan/complex/Complex.java	1115	Found 'DD'-anomaly for variable 'ratio' (lines '1,115'-'1,124').
2766	src/flanagan/complex/Complex.java	1143	Found 'DD'-anomaly for variable 'b' (lines '1,143'-'1,146').
2767	src/flanagan/complex/Complex.java	1152	Found 'DD'-anomaly for variable 'b' (lines '1,152'-'1,153').
2768	src/flanagan/complex/Complex.java	1179	Found 'DD'-anomaly for variable 'ratio' (lines '1,179'-'1,190').
2769	src/flanagan/complex/Complex.java	1179	Found 'DD'-anomaly for variable 'ratio' (lines '1,179'-'1,194').
2770	src/flanagan/complex/Complex.java	1179	Found 'DU'-anomaly for variable 'ratio' (lines '1,179'-'1,199').
2771	src/flanagan/complex/Complex.java	1180	Found 'DD'-anomaly for variable 'res' (lines '1,180'-'1,183').
2772	src/flanagan/complex/Complex.java	1180	Found 'DD'-anomaly for variable 'res' (lines '1,180'-'1,187').
2773	src/flanagan/complex/Complex.java	1180	Found 'DD'-anomaly for variable 'res' (lines '1,180'-'1,191').
2774	src/flanagan/complex/Complex.java	1187	Found 'DD'-anomaly for variable 'res' (lines '1,187'-'1,191').
2775	src/flanagan/complex/Complex.java	1187	Found 'DD'-anomaly for variable 'res' (lines '1,187'-'1,195').
2776	src/flanagan/complex/Complex.java	1493	Avoid unused local variables such as 'denom'.
2777	src/flanagan/complex/Complex.java	1506	Avoid unused local variables such as 'denom'.
2778	src/flanagan/complex/Complex.java	1540	This statement may have some unnecessary parentheses
2779	src/flanagan/complex/Complex.java	1555	This statement may have some unnecessary parentheses
2780	src/flanagan/complex/Complex.java	1562	This statement may have some unnecessary parentheses
2781	src/flanagan/complex/Complex.java	1569	This statement may have some unnecessary parentheses
2782	src/flanagan/complex/Complex.java	1576	This statement may have some unnecessary parentheses
2783	src/flanagan/complex/Complex.java	1799	The method name and parameter number are suspiciously close to equals(Object)
2784	src/flanagan/complex/Complex.java	1813	Avoid if (x != y) ..; else ..;
2785	src/flanagan/complex/Complex.java	1814	Avoid using if...else statements without curly braces
2786	src/flanagan/complex/Complex.java	1855	The method 'isEqualWithinLimits' has a Cyclomatic Complexity of 12.
2787	src/flanagan/complex/Complex.java	1855	The method isEqualWithinLimits() has an NPath complexity of 245
2788	src/flanagan/complex/Complex.java	1891	The method 'isEqualWithinLimits' has a Cyclomatic Complexity of 10.
2789	src/flanagan/complex/Complex.java	1955	Avoid using short method names
2790	src/flanagan/math/Fmath.java	35	This class has a bunch of public methods and attributes
2791	src/flanagan/math/Fmath.java	44	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
2792	src/flanagan/math/Fmath.java	44	Avoid really long classes.
2793	src/flanagan/math/Fmath.java	44	The class 'Fmath' has a Cyclomatic Complexity of 3 (Highest = 15).
2794	src/flanagan/math/Fmath.java	44	The type has an NCSS line count of 1850
2795	src/flanagan/math/Fmath.java	44	This class has too many methods, consider refactoring it.
2796	src/flanagan/math/Fmath.java	64	Avoid excessively long variable names like EULER_CONSTANT_GAMMA
2797	src/flanagan/math/Fmath.java	65	Avoid variables with short names like PI
2798	src/flanagan/math/Fmath.java	66	Avoid variables with short names like E
2799	src/flanagan/math/Fmath.java	74	Avoid variables with short names like a
2800	src/flanagan/math/Fmath.java	74	Parameter 'a' is not assigned and could be declared final
2801	src/flanagan/math/Fmath.java	79	Avoid variables with short names like a
2802	src/flanagan/math/Fmath.java	79	Parameter 'a' is not assigned and could be declared final
2803	src/flanagan/math/Fmath.java	84	Avoid variables with short names like x
2804	src/flanagan/math/Fmath.java	84	Parameter 'x' is not assigned and could be declared final
2805	src/flanagan/math/Fmath.java	89	Parameter 'x' is not assigned and could be declared final
2806	src/flanagan/math/Fmath.java	94	Parameter 'a' is not assigned and could be declared final
2807	src/flanagan/math/Fmath.java	172	Avoid using if statements without curly braces
2808	src/flanagan/math/Fmath.java	173	Avoid using if statements without curly braces
2809	src/flanagan/math/Fmath.java	175	Avoid using for statements without curly braces
2810	src/flanagan/math/Fmath.java	183	Avoid using if statements without curly braces
2811	src/flanagan/math/Fmath.java	184	Avoid using if statements without curly braces
2812	src/flanagan/math/Fmath.java	199	Avoid using if statements without curly braces
2813	src/flanagan/math/Fmath.java	199	The String literal "\nn must be a positive integer\nIs a Gamma funtion [Fmath.gamma(x)] more appropriate?" appears 4 times in this file; the first occurrence is on line 199
2814	src/flanagan/math/Fmath.java	215	Avoid using for statements without curly braces
2815	src/flanagan/math/Fmath.java	251	Local variable 'n' could be declared final
2816	src/flanagan/math/Fmath.java	261	Local variable 'n' could be declared final
2817	src/flanagan/math/Fmath.java	271	Local variable 'n' could be declared final
2818	src/flanagan/math/Fmath.java	281	Local variable 'n' could be declared final
2819	src/flanagan/math/Fmath.java	291	Local variable 'n' could be declared final
2820	src/flanagan/math/Fmath.java	332	Found 'DD'-anomaly for variable 'bb' (lines '332'-'334').
2821	src/flanagan/math/Fmath.java	334	Found 'DD'-anomaly for variable 'bb' (lines '334'-'334').
2822	src/flanagan/math/Fmath.java	342	Found 'DD'-anomaly for variable 'bb' (lines '342'-'344').
2823	src/flanagan/math/Fmath.java	344	Found 'DD'-anomaly for variable 'bb' (lines '344'-'344').
2824	src/flanagan/math/Fmath.java	352	Found 'DD'-anomaly for variable 'bb' (lines '352'-'354').
2825	src/flanagan/math/Fmath.java	354	Found 'DD'-anomaly for variable 'bb' (lines '354'-'354').
2826	src/flanagan/math/Fmath.java	362	Found 'DD'-anomaly for variable 'bb' (lines '362'-'364').
2827	src/flanagan/math/Fmath.java	364	Found 'DD'-anomaly for variable 'bb' (lines '364'-'364').
2828	src/flanagan/math/Fmath.java	372	Found 'DD'-anomaly for variable 'bb' (lines '372'-'374').
2829	src/flanagan/math/Fmath.java	374	Found 'DD'-anomaly for variable 'bb' (lines '374'-'374').
2830	src/flanagan/math/Fmath.java	382	Found 'DD'-anomaly for variable 'bb' (lines '382'-'384').
2831	src/flanagan/math/Fmath.java	384	Found 'DD'-anomaly for variable 'bb' (lines '384'-'384').
2832	src/flanagan/math/Fmath.java	392	Found 'DD'-anomaly for variable 'bb' (lines '392'-'394').
2833	src/flanagan/math/Fmath.java	394	Found 'DD'-anomaly for variable 'bb' (lines '394'-'394').
2834	src/flanagan/math/Fmath.java	402	Found 'DD'-anomaly for variable 'bb' (lines '402'-'404').
2835	src/flanagan/math/Fmath.java	404	Found 'DD'-anomaly for variable 'bb' (lines '404'-'404').
2836	src/flanagan/math/Fmath.java	412	Found 'DD'-anomaly for variable 'bb' (lines '412'-'414').
2837	src/flanagan/math/Fmath.java	414	Found 'DD'-anomaly for variable 'bb' (lines '414'-'414').
2838	src/flanagan/math/Fmath.java	422	Found 'DD'-anomaly for variable 'bb' (lines '422'-'424').
2839	src/flanagan/math/Fmath.java	424	Found 'DD'-anomaly for variable 'bb' (lines '424'-'424').
2840	src/flanagan/math/Fmath.java	432	Found 'DD'-anomaly for variable 'bb' (lines '432'-'434').
2841	src/flanagan/math/Fmath.java	434	Found 'DD'-anomaly for variable 'bb' (lines '434'-'434').
2842	src/flanagan/math/Fmath.java	441	Found 'DD'-anomaly for variable 'bb' (lines '441'-'443').
2843	src/flanagan/math/Fmath.java	443	Found 'DD'-anomaly for variable 'bb' (lines '443'-'443').
2844	src/flanagan/math/Fmath.java	451	Found 'DD'-anomaly for variable 'bb' (lines '451'-'453').
2845	src/flanagan/math/Fmath.java	453	Found 'DD'-anomaly for variable 'bb' (lines '453'-'453').
2846	src/flanagan/math/Fmath.java	461	Found 'DD'-anomaly for variable 'bb' (lines '461'-'462').
2847	src/flanagan/math/Fmath.java	462	Avoid using for statements without curly braces
2848	src/flanagan/math/Fmath.java	462	Found 'DD'-anomaly for variable 'bb' (lines '462'-'462').
2849	src/flanagan/math/Fmath.java	469	Found 'DD'-anomaly for variable 'bb' (lines '469'-'470').
2850	src/flanagan/math/Fmath.java	470	Avoid using for statements without curly braces
2851	src/flanagan/math/Fmath.java	470	Found 'DD'-anomaly for variable 'bb' (lines '470'-'470').
2852	src/flanagan/math/Fmath.java	477	Found 'DD'-anomaly for variable 'index' (lines '477'-'482').
2853	src/flanagan/math/Fmath.java	479	Found 'DU'-anomaly for variable 'counter' (lines '479'-'491').
2854	src/flanagan/math/Fmath.java	482	Found 'DD'-anomaly for variable 'index' (lines '482'-'482').
2855	src/flanagan/math/Fmath.java	496	Found 'DD'-anomaly for variable 'index' (lines '496'-'501').
2856	src/flanagan/math/Fmath.java	498	Found 'DU'-anomaly for variable 'counter' (lines '498'-'510').
2857	src/flanagan/math/Fmath.java	501	Found 'DD'-anomaly for variable 'index' (lines '501'-'501').
2858	src/flanagan/math/Fmath.java	515	Found 'DD'-anomaly for variable 'index' (lines '515'-'520').
2859	src/flanagan/math/Fmath.java	517	Found 'DU'-anomaly for variable 'counter' (lines '517'-'529').
2860	src/flanagan/math/Fmath.java	520	Found 'DD'-anomaly for variable 'index' (lines '520'-'520').
2861	src/flanagan/math/Fmath.java	534	Found 'DD'-anomaly for variable 'index' (lines '534'-'539').
2862	src/flanagan/math/Fmath.java	536	Found 'DU'-anomaly for variable 'counter' (lines '536'-'548').
2863	src/flanagan/math/Fmath.java	539	Found 'DD'-anomaly for variable 'index' (lines '539'-'539').
2864	src/flanagan/math/Fmath.java	553	Found 'DD'-anomaly for variable 'index' (lines '553'-'558').
2865	src/flanagan/math/Fmath.java	555	Found 'DU'-anomaly for variable 'counter' (lines '555'-'567').
2866	src/flanagan/math/Fmath.java	558	Found 'DD'-anomaly for variable 'index' (lines '558'-'558').
2867	src/flanagan/math/Fmath.java	571	Do not use the short type
2868	src/flanagan/math/Fmath.java	571	Do not use the short type
2869	src/flanagan/math/Fmath.java	572	Found 'DD'-anomaly for variable 'index' (lines '572'-'577').
2870	src/flanagan/math/Fmath.java	574	Found 'DU'-anomaly for variable 'counter' (lines '574'-'586').
2871	src/flanagan/math/Fmath.java	577	Found 'DD'-anomaly for variable 'index' (lines '577'-'577').
2872	src/flanagan/math/Fmath.java	591	Found 'DD'-anomaly for variable 'index' (lines '591'-'596').
2873	src/flanagan/math/Fmath.java	593	Found 'DU'-anomaly for variable 'counter' (lines '593'-'605').
2874	src/flanagan/math/Fmath.java	596	Found 'DD'-anomaly for variable 'index' (lines '596'-'596').
2875	src/flanagan/math/Fmath.java	610	Found 'DD'-anomaly for variable 'index' (lines '610'-'615').
2876	src/flanagan/math/Fmath.java	612	Found 'DU'-anomaly for variable 'counter' (lines '612'-'624').
2877	src/flanagan/math/Fmath.java	615	Found 'DD'-anomaly for variable 'index' (lines '615'-'615').
2878	src/flanagan/math/Fmath.java	628	Found 'DU'-anomaly for variable 'diff' (lines '628'-'637').
2879	src/flanagan/math/Fmath.java	629	Found 'DD'-anomaly for variable 'nearest' (lines '629'-'633').
2880	src/flanagan/math/Fmath.java	632	Found 'DU'-anomaly for variable 'diff' (lines '632'-'637').
2881	src/flanagan/math/Fmath.java	633	Found 'DD'-anomaly for variable 'nearest' (lines '633'-'633').
2882	src/flanagan/math/Fmath.java	641	Found 'DU'-anomaly for variable 'diff' (lines '641'-'650').
2883	src/flanagan/math/Fmath.java	642	Found 'DD'-anomaly for variable 'nearest' (lines '642'-'646').
2884	src/flanagan/math/Fmath.java	645	Found 'DU'-anomaly for variable 'diff' (lines '645'-'650').
2885	src/flanagan/math/Fmath.java	646	Found 'DD'-anomaly for variable 'nearest' (lines '646'-'646').
2886	src/flanagan/math/Fmath.java	654	Found 'DD'-anomaly for variable 'diff0' (lines '654'-'663').
2887	src/flanagan/math/Fmath.java	654	Found 'DD'-anomaly for variable 'diff0' (lines '654'-'671').
2888	src/flanagan/math/Fmath.java	654	Found 'DU'-anomaly for variable 'diff0' (lines '654'-'684').
2889	src/flanagan/math/Fmath.java	655	Found 'DD'-anomaly for variable 'diff1' (lines '655'-'677').
2890	src/flanagan/math/Fmath.java	655	Found 'DU'-anomaly for variable 'diff1' (lines '655'-'684').
2891	src/flanagan/math/Fmath.java	656	Found 'DD'-anomaly for variable 'nearest' (lines '656'-'664').
2892	src/flanagan/math/Fmath.java	656	Found 'DD'-anomaly for variable 'nearest' (lines '656'-'670').
2893	src/flanagan/math/Fmath.java	656	Found 'DD'-anomaly for variable 'nearest' (lines '656'-'680').
2894	src/flanagan/math/Fmath.java	657	Found 'DU'-anomaly for variable 'ii' (lines '657'-'684').
2895	src/flanagan/math/Fmath.java	659	Found 'DU'-anomaly for variable 'min' (lines '659'-'684').
2896	src/flanagan/math/Fmath.java	661	Found 'DU'-anomaly for variable 'min' (lines '661'-'684').
2897	src/flanagan/math/Fmath.java	663	Found 'DD'-anomaly for variable 'diff0' (lines '663'-'663').
2898	src/flanagan/math/Fmath.java	663	Found 'DD'-anomaly for variable 'diff0' (lines '663'-'671').
2899	src/flanagan/math/Fmath.java	663	Found 'DU'-anomaly for variable 'diff0' (lines '663'-'684').
2900	src/flanagan/math/Fmath.java	664	Found 'DD'-anomaly for variable 'nearest' (lines '664'-'664').
2901	src/flanagan/math/Fmath.java	664	Found 'DD'-anomaly for variable 'nearest' (lines '664'-'670').
2902	src/flanagan/math/Fmath.java	664	Found 'DD'-anomaly for variable 'nearest' (lines '664'-'680').
2903	src/flanagan/math/Fmath.java	670	Found 'DD'-anomaly for variable 'nearest' (lines '670'-'664').
2904	src/flanagan/math/Fmath.java	670	Found 'DD'-anomaly for variable 'nearest' (lines '670'-'670').
2905	src/flanagan/math/Fmath.java	670	Found 'DD'-anomaly for variable 'nearest' (lines '670'-'680').
2906	src/flanagan/math/Fmath.java	671	Found 'DD'-anomaly for variable 'diff0' (lines '671'-'663').
2907	src/flanagan/math/Fmath.java	671	Found 'DD'-anomaly for variable 'diff0' (lines '671'-'671').
2908	src/flanagan/math/Fmath.java	671	Found 'DU'-anomaly for variable 'diff0' (lines '671'-'684').
2909	src/flanagan/math/Fmath.java	679	Found 'DU'-anomaly for variable 'diff0' (lines '679'-'684').
2910	src/flanagan/math/Fmath.java	680	Found 'DD'-anomaly for variable 'nearest' (lines '680'-'680').
2911	src/flanagan/math/Fmath.java	688	Found 'DD'-anomaly for variable 'diff0' (lines '688'-'701').
2912	src/flanagan/math/Fmath.java	689	Found 'DD'-anomaly for variable 'diff1' (lines '689'-'715').
2913	src/flanagan/math/Fmath.java	690	Found 'DD'-anomaly for variable 'nearest' (lines '690'-'702').
2914	src/flanagan/math/Fmath.java	694	Found 'DD'-anomaly for variable 'minI' (lines '694'-'698').
2915	src/flanagan/math/Fmath.java	697	Found 'DU'-anomaly for variable 'min' (lines '697'-'722').
2916	src/flanagan/math/Fmath.java	698	Found 'DD'-anomaly for variable 'minI' (lines '698'-'698').
2917	src/flanagan/math/Fmath.java	698	Found 'DU'-anomaly for variable 'minI' (lines '698'-'722').
2918	src/flanagan/math/Fmath.java	701	Found 'DD'-anomaly for variable 'diff0' (lines '701'-'701').
2919	src/flanagan/math/Fmath.java	701	Found 'DU'-anomaly for variable 'diff0' (lines '701'-'722').
2920	src/flanagan/math/Fmath.java	702	Found 'DD'-anomaly for variable 'nearest' (lines '702'-'702').
2921	src/flanagan/math/Fmath.java	702	Found 'DD'-anomaly for variable 'nearest' (lines '702'-'718').
2922	src/flanagan/math/Fmath.java	717	Found 'DU'-anomaly for variable 'diff0' (lines '717'-'722').
2923	src/flanagan/math/Fmath.java	718	Found 'DD'-anomaly for variable 'nearest' (lines '718'-'718').
2924	src/flanagan/math/Fmath.java	970	Avoid using for statements without curly braces
2925	src/flanagan/math/Fmath.java	1134	Do not use the short type
2926	src/flanagan/math/Fmath.java	1144	Do not use the short type
2927	src/flanagan/math/Fmath.java	1154	Do not use the short type
2928	src/flanagan/math/Fmath.java	1238	System.out.print is used
2929	src/flanagan/math/Fmath.java	1238	The String literal " " appears 12 times in this file; the first occurrence is on line 1,238
2930	src/flanagan/math/Fmath.java	1240	System.out.print is used
2931	src/flanagan/math/Fmath.java	1247	System.out.print is used
2932	src/flanagan/math/Fmath.java	1255	System.out.print is used
2933	src/flanagan/math/Fmath.java	1257	System.out.print is used
2934	src/flanagan/math/Fmath.java	1340	Avoid using implementation types like 'Vector'; use the interface instead
2935	src/flanagan/math/Fmath.java	1340	Avoid using implementation types like 'Vector'; use the interface instead
2936	src/flanagan/math/Fmath.java	1340	Consider replacing this Vector with the newer java.util.List
2937	src/flanagan/math/Fmath.java	1368	Consider replacing this Vector with the newer java.util.List
2938	src/flanagan/math/Fmath.java	1368	Use ArrayList instead of Vector
2939	src/flanagan/math/Fmath.java	1383	System.arraycopy is more efficient
2940	src/flanagan/math/Fmath.java	1410	System.arraycopy is more efficient
2941	src/flanagan/math/Fmath.java	1437	System.arraycopy is more efficient
2942	src/flanagan/math/Fmath.java	1464	System.arraycopy is more efficient
2943	src/flanagan/math/Fmath.java	1525	The String literal ") and the second argument array, bb, (length = " appears 10 times in this file; the first occurrence is on line 1,525
2944	src/flanagan/math/Fmath.java	1525	The String literal ") should be the same length" appears 10 times in this file; the first occurrence is on line 1,525
2945	src/flanagan/math/Fmath.java	1525	The String literal "First argument array, aa, (length = " appears 10 times in this file; the first occurrence is on line 1,525
2946	src/flanagan/math/Fmath.java	1933	A method should have only one exit point, and that should be the last statement in the method
2947	src/flanagan/math/Fmath.java	1944	A method should have only one exit point, and that should be the last statement in the method
2948	src/flanagan/math/Fmath.java	1955	A method should have only one exit point, and that should be the last statement in the method
2949	src/flanagan/math/Fmath.java	1966	A method should have only one exit point, and that should be the last statement in the method
2950	src/flanagan/math/Fmath.java	2212	Avoid reassigning parameters such as 'height'
2951	src/flanagan/math/Fmath.java	2212	Avoid reassigning parameters such as 'weight'
2952	src/flanagan/math/Fmath.java	2224	Avoid reassigning parameters such as 'height'
2953	src/flanagan/math/Fmath.java	2452	A method should have only one exit point, and that should be the last statement in the method
2954	src/flanagan/math/Fmath.java	2465	Avoid reassigning parameters such as 'a'
2955	src/flanagan/math/Fmath.java	2491	Avoid reassigning parameters such as 'a'
2956	src/flanagan/math/Fmath.java	2548	These nested if statements could be combined
2957	src/flanagan/math/Fmath.java	2549	These nested if statements could be combined
2958	src/flanagan/math/Fmath.java	2550	These nested if statements could be combined
2959	src/flanagan/math/Fmath.java	2551	This statement may have some unnecessary parentheses
2960	src/flanagan/math/Fmath.java	2551	This statement may have some unnecessary parentheses
2961	src/flanagan/math/Fmath.java	2564	These nested if statements could be combined
2962	src/flanagan/math/Fmath.java	2565	These nested if statements could be combined
2963	src/flanagan/math/Fmath.java	2567	This statement may have some unnecessary parentheses
2964	src/flanagan/math/Fmath.java	2567	This statement may have some unnecessary parentheses
2965	src/flanagan/math/Fmath.java	2577	The method 'truncateProcedure' has a Cyclomatic Complexity of 15.
2966	src/flanagan/math/Fmath.java	2577	The method truncateProcedure() has an NPath complexity of 240
2967	src/flanagan/math/Fmath.java	2612	Prefer StringBuffer over += for concatenating strings
2968	src/flanagan/math/Fmath.java	2615	Prefer StringBuffer over += for concatenating strings
2969	src/flanagan/math/Fmath.java	2645	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2970	src/flanagan/math/Fmath.java	2645	This statement may have some unnecessary parentheses
2971	src/flanagan/math/Fmath.java	2648	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2972	src/flanagan/math/Fmath.java	2648	Avoid instantiating new objects inside loops
2973	src/flanagan/math/Fmath.java	2648	Prefer StringBuffer over += for concatenating strings
2974	src/flanagan/math/Fmath.java	2660	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2975	src/flanagan/math/Fmath.java	2832	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2976	src/flanagan/math/Fmath.java	2833	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
2977	src/flanagan/math/Fmath.java	2842	Avoid instantiating Long objects.Call Long.valueOf() instead
2978	src/flanagan/math/Fmath.java	2843	Avoid instantiating Long objects.Call Long.valueOf() instead
2979	src/flanagan/math/Fmath.java	2862	Avoid instantiating Byte objects. Call Byte.valueOf() instead
2980	src/flanagan/math/Fmath.java	2863	Avoid instantiating Byte objects. Call Byte.valueOf() instead
2981	src/flanagan/math/Fmath.java	2872	Avoid instantiating Short objects. Call Short.valueOf() instead
2982	src/flanagan/math/Fmath.java	2873	Avoid instantiating Short objects. Call Short.valueOf() instead
2983	src/flanagan/math/Fmath.java	2933	Avoid if (x != y) ..; else ..;
2984	src/flanagan/math/Fmath.java	3002	Avoid printStackTrace(); use a logger call instead.
2985	src/flanagan/math/Fmath.java	3005	Avoid printStackTrace(); use a logger call instead.
2986	src/jama/CholeskyDecomposition.java	14	Classes implementing Serializable should set a serialVersionUID
2987	src/jama/CholeskyDecomposition.java	14	The class 'CholeskyDecomposition' has a Cyclomatic Complexity of 5 (Highest = 11).
2988	src/jama/CholeskyDecomposition.java	23	Avoid variables with short names like L
2989	src/jama/CholeskyDecomposition.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
2990	src/jama/CholeskyDecomposition.java	23	Private field 'L' could be made final; it is only initialized in the declaration or constructor.
2991	src/jama/CholeskyDecomposition.java	23	The field name indicates a constant but its modifiers do not
2992	src/jama/CholeskyDecomposition.java	28	Avoid variables with short names like n
2993	src/jama/CholeskyDecomposition.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
2994	src/jama/CholeskyDecomposition.java	28	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
2995	src/jama/CholeskyDecomposition.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
2996	src/jama/CholeskyDecomposition.java	33	It is somewhat confusing to have a field name with the same name as a method
2997	src/jama/CholeskyDecomposition.java	33	Private field 'isspd' could be made final; it is only initialized in the declaration or constructor.
2998	src/jama/CholeskyDecomposition.java	44	Parameter 'Arg' is not assigned and could be declared final
2999	src/jama/CholeskyDecomposition.java	46	Avoid variables with short names like A
3000	src/jama/CholeskyDecomposition.java	46	Local variable 'A' could be declared final
3001	src/jama/CholeskyDecomposition.java	53	Avoid variables with short names like d
3002	src/jama/CholeskyDecomposition.java	55	Local variable 'Lrowk' could be declared final
3003	src/jama/CholeskyDecomposition.java	56	Avoid variables with short names like s
3004	src/jama/CholeskyDecomposition.java	162	Parameter 'B' is not assigned and could be declared final
3005	src/jama/CholeskyDecomposition.java	162	The method 'solve' has a Cyclomatic Complexity of 11.
3006	src/jama/CholeskyDecomposition.java	167	Avoid throwing raw exception types.
3007	src/jama/CholeskyDecomposition.java	172	Local variable 'nx' could be declared final
3008	src/jama/EigenvalueDecomposition.java	20	Classes implementing Serializable should set a serialVersionUID
3009	src/jama/EigenvalueDecomposition.java	20	The class 'EigenvalueDecomposition' has a Cyclomatic Complexity of 15 (Highest = 70).
3010	src/jama/EigenvalueDecomposition.java	29	Avoid variables with short names like n
3011	src/jama/EigenvalueDecomposition.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
3012	src/jama/EigenvalueDecomposition.java	29	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
3013	src/jama/EigenvalueDecomposition.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
3014	src/jama/EigenvalueDecomposition.java	34	Perhaps 'issymmetric' could be replaced by a local variable.
3015	src/jama/EigenvalueDecomposition.java	34	Private field 'issymmetric' could be made final; it is only initialized in the declaration or constructor.
3016	src/jama/EigenvalueDecomposition.java	39	Avoid variables with short names like d
3017	src/jama/EigenvalueDecomposition.java	39	Avoid variables with short names like e
3018	src/jama/EigenvalueDecomposition.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
3019	src/jama/EigenvalueDecomposition.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
3020	src/jama/EigenvalueDecomposition.java	44	Avoid variables with short names like V
3021	src/jama/EigenvalueDecomposition.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
3022	src/jama/EigenvalueDecomposition.java	44	The field name indicates a constant but its modifiers do not
3023	src/jama/EigenvalueDecomposition.java	49	Avoid variables with short names like H
3024	src/jama/EigenvalueDecomposition.java	49	The field name indicates a constant but its modifiers do not
3025	src/jama/EigenvalueDecomposition.java	62	Avoid really long methods.
3026	src/jama/EigenvalueDecomposition.java	62	The method 'tred2' has a Cyclomatic Complexity of 23.
3027	src/jama/EigenvalueDecomposition.java	62	The method tred2() has an NPath complexity of 53452
3028	src/jama/EigenvalueDecomposition.java	79	Found 'DD'-anomaly for variable 'scale' (lines '79'-'82').
3029	src/jama/EigenvalueDecomposition.java	128	Local variable 'hh' could be declared final
3030	src/jama/EigenvalueDecomposition.java	150	Local variable 'h' could be declared final
3031	src/jama/EigenvalueDecomposition.java	156	Found 'DD'-anomaly for variable 'g' (lines '156'-'156').
3032	src/jama/EigenvalueDecomposition.java	156	Found 'DU'-anomaly for variable 'g' (lines '156'-'175').
3033	src/jama/EigenvalueDecomposition.java	179	Avoid really long methods.
3034	src/jama/EigenvalueDecomposition.java	179	The method 'tql2' has a Cyclomatic Complexity of 16.
3035	src/jama/EigenvalueDecomposition.java	179	The method tql2() has an NPath complexity of 860
3036	src/jama/EigenvalueDecomposition.java	186	System.arraycopy is more efficient
3037	src/jama/EigenvalueDecomposition.java	191	Found 'DD'-anomaly for variable 'f' (lines '191'-'230').
3038	src/jama/EigenvalueDecomposition.java	192	Found 'DD'-anomaly for variable 'tst1' (lines '192'-'198').
3039	src/jama/EigenvalueDecomposition.java	193	Local variable 'eps' could be declared final
3040	src/jama/EigenvalueDecomposition.java	211	Found 'DD'-anomaly for variable 'iter' (lines '211'-'213').
3041	src/jama/EigenvalueDecomposition.java	219	Found 'DD'-anomaly for variable 'r' (lines '219'-'221').
3042	src/jama/EigenvalueDecomposition.java	225	Local variable 'dl1' could be declared final
3043	src/jama/EigenvalueDecomposition.java	237	Found 'DD'-anomaly for variable 'c3' (lines '237'-'242').
3044	src/jama/EigenvalueDecomposition.java	238	Local variable 'el1' could be declared final
3045	src/jama/EigenvalueDecomposition.java	240	Found 'DD'-anomaly for variable 's2' (lines '240'-'244').
3046	src/jama/EigenvalueDecomposition.java	242	Found 'DD'-anomaly for variable 'c3' (lines '242'-'242').
3047	src/jama/EigenvalueDecomposition.java	243	Found 'DD'-anomaly for variable 'c2' (lines '243'-'236').
3048	src/jama/EigenvalueDecomposition.java	243	Found 'DU'-anomaly for variable 'c2' (lines '243'-'295').
3049	src/jama/EigenvalueDecomposition.java	244	Found 'DD'-anomaly for variable 's2' (lines '244'-'244').
3050	src/jama/EigenvalueDecomposition.java	251	Found 'DD'-anomaly for variable 'p' (lines '251'-'262').
3051	src/jama/EigenvalueDecomposition.java	277	Found 'DD'-anomaly for variable 'k' (lines '277'-'281').
3052	src/jama/EigenvalueDecomposition.java	278	Found 'DD'-anomaly for variable 'p' (lines '278'-'278').
3053	src/jama/EigenvalueDecomposition.java	278	Found 'DU'-anomaly for variable 'p' (lines '278'-'295').
3054	src/jama/EigenvalueDecomposition.java	281	Found 'DD'-anomaly for variable 'k' (lines '281'-'281').
3055	src/jama/EigenvalueDecomposition.java	282	Found 'DD'-anomaly for variable 'p' (lines '282'-'278').
3056	src/jama/EigenvalueDecomposition.java	282	Found 'DU'-anomaly for variable 'p' (lines '282'-'295').
3057	src/jama/EigenvalueDecomposition.java	299	The method 'orthes' has a Cyclomatic Complexity of 21.
3058	src/jama/EigenvalueDecomposition.java	299	The method orthes() has an NPath complexity of 17052
3059	src/jama/EigenvalueDecomposition.java	313	Found 'DD'-anomaly for variable 'scale' (lines '313'-'315').
3060	src/jama/EigenvalueDecomposition.java	326	Found 'DD'-anomaly for variable 'g' (lines '326'-'328').
3061	src/jama/EigenvalueDecomposition.java	376	Found 'DD'-anomaly for variable 'g' (lines '376'-'381').
3062	src/jama/EigenvalueDecomposition.java	394	Parameter 'xi' is not assigned and could be declared final
3063	src/jama/EigenvalueDecomposition.java	394	Parameter 'xr' is not assigned and could be declared final
3064	src/jama/EigenvalueDecomposition.java	394	Parameter 'yi' is not assigned and could be declared final
3065	src/jama/EigenvalueDecomposition.java	394	Parameter 'yr' is not assigned and could be declared final
3066	src/jama/EigenvalueDecomposition.java	412	Avoid really long methods.
3067	src/jama/EigenvalueDecomposition.java	412	The method 'hqr2' has a Cyclomatic Complexity of 70.
3068	src/jama/EigenvalueDecomposition.java	412	The method hqr2() has an NCSS line count of 273
3069	src/jama/EigenvalueDecomposition.java	412	The method hqr2() has an NPath complexity of 2087071136
3070	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 'p' (lines '427'-'701').
3071	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 'q' (lines '427'-'702').
3072	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 'r' (lines '427'-'711').
3073	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 's' (lines '427'-'451').
3074	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 't' (lines '427'-'744').
3075	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 'w' (lines '427'-'710').
3076	src/jama/EigenvalueDecomposition.java	427	Found 'DD'-anomaly for variable 'z' (lines '427'-'716').
3077	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'p' (lines '427'-'850').
3078	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'q' (lines '427'-'850').
3079	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'r' (lines '427'-'850').
3080	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 't' (lines '427'-'850').
3081	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'w' (lines '427'-'850').
3082	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'x' (lines '427'-'850').
3083	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'y' (lines '427'-'850').
3084	src/jama/EigenvalueDecomposition.java	427	Found 'DU'-anomaly for variable 'z' (lines '427'-'850').
3085	src/jama/EigenvalueDecomposition.java	431	Found 'DD'-anomaly for variable 'norm' (lines '431'-'438').
3086	src/jama/EigenvalueDecomposition.java	444	Found 'DD'-anomaly for variable 'iter' (lines '444'-'469').
3087	src/jama/EigenvalueDecomposition.java	469	Found 'DD'-anomaly for variable 'iter' (lines '469'-'469').
3088	src/jama/EigenvalueDecomposition.java	469	Found 'DU'-anomaly for variable 'iter' (lines '469'-'850').
3089	src/jama/EigenvalueDecomposition.java	642	Avoid if (x != y) ..; else ..;
3090	src/jama/EigenvalueDecomposition.java	711	Found 'DD'-anomaly for variable 'r' (lines '711'-'713').
3091	src/jama/EigenvalueDecomposition.java	716	Found 'DD'-anomaly for variable 'z' (lines '716'-'716').
3092	src/jama/EigenvalueDecomposition.java	716	Found 'DD'-anomaly for variable 'z' (lines '716'-'843').
3093	src/jama/EigenvalueDecomposition.java	716	Found 'DU'-anomaly for variable 'z' (lines '716'-'850').
3094	src/jama/EigenvalueDecomposition.java	717	Found 'DD'-anomaly for variable 's' (lines '717'-'717').
3095	src/jama/EigenvalueDecomposition.java	717	Found 'DU'-anomaly for variable 's' (lines '717'-'850').
3096	src/jama/EigenvalueDecomposition.java	719	Found 'DU'-anomaly for variable 'l' (lines '719'-'850').
3097	src/jama/EigenvalueDecomposition.java	721	Avoid if (x != y) ..; else ..;
3098	src/jama/EigenvalueDecomposition.java	843	Found 'DD'-anomaly for variable 'z' (lines '843'-'845').
3099	src/jama/EigenvalueDecomposition.java	862	Parameter 'Arg' is not assigned and could be declared final
3100	src/jama/EigenvalueDecomposition.java	924	Returning 'd' may expose an internal array.
3101	src/jama/EigenvalueDecomposition.java	941	Found 'DD'-anomaly for variable 'D' (lines '941'-'944').
3102	src/jama/EigenvalueDecomposition.java	941	Found 'DD'-anomaly for variable 'D' (lines '941'-'946').
3103	src/jama/EigenvalueDecomposition.java	941	Found 'DU'-anomaly for variable 'D' (lines '941'-'954').
3104	src/jama/EigenvalueDecomposition.java	944	Found 'DD'-anomaly for variable 'D' (lines '944'-'944').
3105	src/jama/EigenvalueDecomposition.java	944	Found 'DD'-anomaly for variable 'D' (lines '944'-'946').
3106	src/jama/EigenvalueDecomposition.java	946	Found 'DD'-anomaly for variable 'D' (lines '946'-'944').
3107	src/jama/EigenvalueDecomposition.java	946	Found 'DD'-anomaly for variable 'D' (lines '946'-'946').
3108	src/jama/EigenvalueDecomposition.java	946	Found 'DD'-anomaly for variable 'D' (lines '946'-'948').
3109	src/jama/EigenvalueDecomposition.java	946	Found 'DD'-anomaly for variable 'D' (lines '946'-'950').
3110	src/jama/EigenvalueDecomposition.java	946	Found 'DU'-anomaly for variable 'D' (lines '946'-'954').
3111	src/jama/EigenvalueDecomposition.java	948	Found 'DD'-anomaly for variable 'D' (lines '948'-'944').
3112	src/jama/EigenvalueDecomposition.java	948	Found 'DD'-anomaly for variable 'D' (lines '948'-'946').
3113	src/jama/EigenvalueDecomposition.java	948	Found 'DU'-anomaly for variable 'D' (lines '948'-'954').
3114	src/jama/EigenvalueDecomposition.java	950	Found 'DD'-anomaly for variable 'D' (lines '950'-'944').
3115	src/jama/EigenvalueDecomposition.java	950	Found 'DD'-anomaly for variable 'D' (lines '950'-'946').
3116	src/jama/EigenvalueDecomposition.java	950	Found 'DU'-anomaly for variable 'D' (lines '950'-'954').
3117	src/jama/LUDecomposition.java	16	Classes implementing Serializable should set a serialVersionUID
3118	src/jama/LUDecomposition.java	16	The class 'LUDecomposition' has a Cyclomatic Complexity of 5 (Highest = 12).
3119	src/jama/LUDecomposition.java	25	Avoid variables with short names like LU
3120	src/jama/LUDecomposition.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
3121	src/jama/LUDecomposition.java	25	Private field 'LU' could be made final; it is only initialized in the declaration or constructor.
3122	src/jama/LUDecomposition.java	25	The field name indicates a constant but its modifiers do not
3123	src/jama/LUDecomposition.java	32	Avoid variables with short names like m
3124	src/jama/LUDecomposition.java	32	Avoid variables with short names like n
3125	src/jama/LUDecomposition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3126	src/jama/LUDecomposition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3127	src/jama/LUDecomposition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3128	src/jama/LUDecomposition.java	32	Private field 'm' could be made final; it is only initialized in the declaration or constructor.
3129	src/jama/LUDecomposition.java	32	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
3130	src/jama/LUDecomposition.java	32	Private field 'pivsign' could be made final; it is only initialized in the declaration or constructor.
3131	src/jama/LUDecomposition.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
3132	src/jama/LUDecomposition.java	37	Private field 'piv' could be made final; it is only initialized in the declaration or constructor.
3133	src/jama/LUDecomposition.java	48	Avoid variables with short names like A
3134	src/jama/LUDecomposition.java	48	Parameter 'A' is not assigned and could be declared final
3135	src/jama/LUDecomposition.java	48	The constructor 'LUDecomposition' has a Cyclomatic Complexity of 12.
3136	src/jama/LUDecomposition.java	80	Local variable 'kmax' could be declared final
3137	src/jama/LUDecomposition.java	81	Avoid variables with short names like s
3138	src/jama/LUDecomposition.java	99	Local variable 't' could be declared final
3139	src/jama/LUDecomposition.java	101	Local variable 'k' could be declared final
3140	src/jama/LUDecomposition.java	184	Avoid using if statements without curly braces
3141	src/jama/LUDecomposition.java	185	A method should have only one exit point, and that should be the last statement in the method
3142	src/jama/LUDecomposition.java	195	Local variable 'X' could be declared final
3143	src/jama/LUDecomposition.java	196	Found 'DD'-anomaly for variable 'L' (lines '196'-'200').
3144	src/jama/LUDecomposition.java	196	Found 'DD'-anomaly for variable 'L' (lines '196'-'202').
3145	src/jama/LUDecomposition.java	196	Found 'DD'-anomaly for variable 'L' (lines '196'-'204').
3146	src/jama/LUDecomposition.java	196	Found 'DU'-anomaly for variable 'L' (lines '196'-'209').
3147	src/jama/LUDecomposition.java	200	Found 'DD'-anomaly for variable 'L' (lines '200'-'200').
3148	src/jama/LUDecomposition.java	200	Found 'DD'-anomaly for variable 'L' (lines '200'-'202').
3149	src/jama/LUDecomposition.java	200	Found 'DD'-anomaly for variable 'L' (lines '200'-'204').
3150	src/jama/LUDecomposition.java	200	Found 'DU'-anomaly for variable 'L' (lines '200'-'209').
3151	src/jama/LUDecomposition.java	202	Found 'DD'-anomaly for variable 'L' (lines '202'-'200').
3152	src/jama/LUDecomposition.java	202	Found 'DD'-anomaly for variable 'L' (lines '202'-'202').
3153	src/jama/LUDecomposition.java	202	Found 'DD'-anomaly for variable 'L' (lines '202'-'204').
3154	src/jama/LUDecomposition.java	202	Found 'DU'-anomaly for variable 'L' (lines '202'-'209').
3155	src/jama/LUDecomposition.java	204	Found 'DD'-anomaly for variable 'L' (lines '204'-'200').
3156	src/jama/LUDecomposition.java	204	Found 'DD'-anomaly for variable 'L' (lines '204'-'202').
3157	src/jama/LUDecomposition.java	204	Found 'DD'-anomaly for variable 'L' (lines '204'-'204').
3158	src/jama/LUDecomposition.java	204	Found 'DU'-anomaly for variable 'L' (lines '204'-'209').
3159	src/jama/LUDecomposition.java	216	Local variable 'X' could be declared final
3160	src/jama/LUDecomposition.java	217	Found 'DD'-anomaly for variable 'U' (lines '217'-'221').
3161	src/jama/LUDecomposition.java	217	Found 'DD'-anomaly for variable 'U' (lines '217'-'223').
3162	src/jama/LUDecomposition.java	217	Found 'DU'-anomaly for variable 'U' (lines '217'-'228').
3163	src/jama/LUDecomposition.java	221	Found 'DD'-anomaly for variable 'U' (lines '221'-'221').
3164	src/jama/LUDecomposition.java	221	Found 'DD'-anomaly for variable 'U' (lines '221'-'223').
3165	src/jama/LUDecomposition.java	221	Found 'DU'-anomaly for variable 'U' (lines '221'-'228').
3166	src/jama/LUDecomposition.java	223	Found 'DD'-anomaly for variable 'U' (lines '223'-'221').
3167	src/jama/LUDecomposition.java	223	Found 'DD'-anomaly for variable 'U' (lines '223'-'223').
3168	src/jama/LUDecomposition.java	223	Found 'DU'-anomaly for variable 'U' (lines '223'-'228').
3169	src/jama/LUDecomposition.java	235	Found 'DD'-anomaly for variable 'p' (lines '235'-'237').
3170	src/jama/LUDecomposition.java	236	System.arraycopy is more efficient
3171	src/jama/LUDecomposition.java	237	Found 'DD'-anomaly for variable 'p' (lines '237'-'237').
3172	src/jama/LUDecomposition.java	247	Found 'DD'-anomaly for variable 'vals' (lines '247'-'249').
3173	src/jama/LUDecomposition.java	249	Found 'DD'-anomaly for variable 'vals' (lines '249'-'249').
3174	src/jama/LUDecomposition.java	277	Parameter 'B' is not assigned and could be declared final
3175	src/jama/LUDecomposition.java	277	The method 'solve' has a Cyclomatic Complexity of 10.
3176	src/jama/LUDecomposition.java	282	Avoid throwing raw exception types.
3177	src/jama/Matrix.java	1	This class has a bunch of public methods and attributes
3178	src/jama/Matrix.java	57	Classes implementing Serializable should set a serialVersionUID
3179	src/jama/Matrix.java	57	This class has too many methods, consider refactoring it.
3180	src/jama/Matrix.java	66	Avoid variables with short names like A
3181	src/jama/Matrix.java	66	Found non-transient, non-static member. Please mark as transient or provide accessors.
3182	src/jama/Matrix.java	66	The field name indicates a constant but its modifiers do not
3183	src/jama/Matrix.java	72	Avoid variables with short names like m
3184	src/jama/Matrix.java	72	Avoid variables with short names like n
3185	src/jama/Matrix.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
3186	src/jama/Matrix.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
3187	src/jama/Matrix.java	72	Private field 'm' could be made final; it is only initialized in the declaration or constructor.
3188	src/jama/Matrix.java	72	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
3189	src/jama/Matrix.java	83	Avoid variables with short names like m
3190	src/jama/Matrix.java	83	Avoid variables with short names like n
3191	src/jama/Matrix.java	83	Parameter 'm' is not assigned and could be declared final
3192	src/jama/Matrix.java	83	Parameter 'n' is not assigned and could be declared final
3193	src/jama/Matrix.java	95	Parameter 'm' is not assigned and could be declared final
3194	src/jama/Matrix.java	95	Parameter 'n' is not assigned and could be declared final
3195	src/jama/Matrix.java	95	Parameter 's' is not assigned and could be declared final
3196	src/jama/Matrix.java	112	The user-supplied array 'A' is stored directly.
3197	src/jama/Matrix.java	117	Avoid empty if statements
3198	src/jama/Matrix.java	122	System.out.print is used
3199	src/jama/Matrix.java	133	The user-supplied array 'A' is stored directly.
3200	src/jama/Matrix.java	147	Avoid if (x != y) ..; else ..;
3201	src/jama/Matrix.java	169	Local variable 'm' could be declared final
3202	src/jama/Matrix.java	170	Local variable 'n' could be declared final
3203	src/jama/Matrix.java	171	Local variable 'X' could be declared final
3204	src/jama/Matrix.java	172	Found 'DD'-anomaly for variable 'C' (lines '172'-'179').
3205	src/jama/Matrix.java	172	Found 'DU'-anomaly for variable 'C' (lines '172'-'183').
3206	src/jama/Matrix.java	179	Found 'DD'-anomaly for variable 'C' (lines '179'-'179').
3207	src/jama/Matrix.java	179	Found 'DU'-anomaly for variable 'C' (lines '179'-'183').
3208	src/jama/Matrix.java	189	Local variable 'X' could be declared final
3209	src/jama/Matrix.java	190	Found 'DD'-anomaly for variable 'C' (lines '190'-'193').
3210	src/jama/Matrix.java	190	Found 'DU'-anomaly for variable 'C' (lines '190'-'197').
3211	src/jama/Matrix.java	193	Found 'DD'-anomaly for variable 'C' (lines '193'-'193').
3212	src/jama/Matrix.java	193	Found 'DU'-anomaly for variable 'C' (lines '193'-'197').
3213	src/jama/Matrix.java	202	clone() method should throw CloneNotSupportedException
3214	src/jama/Matrix.java	211	Returning 'A' may expose an internal array.
3215	src/jama/Matrix.java	219	Found 'DD'-anomaly for variable 'C' (lines '219'-'222').
3216	src/jama/Matrix.java	222	Found 'DD'-anomaly for variable 'C' (lines '222'-'222').
3217	src/jama/Matrix.java	233	Found 'DD'-anomaly for variable 'vals' (lines '233'-'236').
3218	src/jama/Matrix.java	236	Found 'DD'-anomaly for variable 'vals' (lines '236'-'236').
3219	src/jama/Matrix.java	247	Found 'DD'-anomaly for variable 'vals' (lines '247'-'250').
3220	src/jama/Matrix.java	250	Found 'DD'-anomaly for variable 'vals' (lines '250'-'250').
3221	src/jama/Matrix.java	293	Local variable 'X' could be declared final
3222	src/jama/Matrix.java	294	Found 'DD'-anomaly for variable 'B' (lines '294'-'298').
3223	src/jama/Matrix.java	294	Found 'DU'-anomaly for variable 'B' (lines '294'-'305').
3224	src/jama/Matrix.java	298	Found 'DD'-anomaly for variable 'B' (lines '298'-'298').
3225	src/jama/Matrix.java	298	Found 'DU'-anomaly for variable 'B' (lines '298'-'305').
3226	src/jama/Matrix.java	302	New exception is thrown in catch block, original stack trace may be lost
3227	src/jama/Matrix.java	302	The String literal "Submatrix indices" appears 8 times in this file; the first occurrence is on line 302
3228	src/jama/Matrix.java	316	Found 'DD'-anomaly for variable 'B' (lines '316'-'320').
3229	src/jama/Matrix.java	316	Found 'DU'-anomaly for variable 'B' (lines '316'-'327').
3230	src/jama/Matrix.java	320	Found 'DD'-anomaly for variable 'B' (lines '320'-'320').
3231	src/jama/Matrix.java	320	Found 'DU'-anomaly for variable 'B' (lines '320'-'327').
3232	src/jama/Matrix.java	324	New exception is thrown in catch block, original stack trace may be lost
3233	src/jama/Matrix.java	339	Found 'DD'-anomaly for variable 'B' (lines '339'-'343').
3234	src/jama/Matrix.java	339	Found 'DU'-anomaly for variable 'B' (lines '339'-'350').
3235	src/jama/Matrix.java	343	Found 'DD'-anomaly for variable 'B' (lines '343'-'343').
3236	src/jama/Matrix.java	343	Found 'DU'-anomaly for variable 'B' (lines '343'-'350').
3237	src/jama/Matrix.java	347	New exception is thrown in catch block, original stack trace may be lost
3238	src/jama/Matrix.java	362	Found 'DD'-anomaly for variable 'B' (lines '362'-'366').
3239	src/jama/Matrix.java	362	Found 'DU'-anomaly for variable 'B' (lines '362'-'373').
3240	src/jama/Matrix.java	366	Found 'DD'-anomaly for variable 'B' (lines '366'-'366').
3241	src/jama/Matrix.java	366	Found 'DU'-anomaly for variable 'B' (lines '366'-'373').
3242	src/jama/Matrix.java	370	New exception is thrown in catch block, original stack trace may be lost
3243	src/jama/Matrix.java	403	New exception is thrown in catch block, original stack trace may be lost
3244	src/jama/Matrix.java	472	Found 'DD'-anomaly for variable 'C' (lines '472'-'475').
3245	src/jama/Matrix.java	472	Found 'DU'-anomaly for variable 'C' (lines '472'-'479').
3246	src/jama/Matrix.java	475	Found 'DD'-anomaly for variable 'C' (lines '475'-'475').
3247	src/jama/Matrix.java	475	Found 'DU'-anomaly for variable 'C' (lines '475'-'479').
3248	src/jama/Matrix.java	486	Found 'DD'-anomaly for variable 'f' (lines '486'-'492').
3249	src/jama/Matrix.java	502	This statement may have some unnecessary parentheses
3250	src/jama/Matrix.java	510	Found 'DD'-anomaly for variable 'f' (lines '510'-'516').
3251	src/jama/Matrix.java	526	Found 'DD'-anomaly for variable 'f' (lines '526'-'529').
3252	src/jama/Matrix.java	541	Found 'DD'-anomaly for variable 'C' (lines '541'-'544').
3253	src/jama/Matrix.java	541	Found 'DU'-anomaly for variable 'C' (lines '541'-'548').
3254	src/jama/Matrix.java	544	Found 'DD'-anomaly for variable 'C' (lines '544'-'544').
3255	src/jama/Matrix.java	544	Found 'DU'-anomaly for variable 'C' (lines '544'-'548').
3256	src/jama/Matrix.java	558	Found 'DD'-anomaly for variable 'C' (lines '558'-'561').
3257	src/jama/Matrix.java	558	Found 'DU'-anomaly for variable 'C' (lines '558'-'565').
3258	src/jama/Matrix.java	561	Found 'DD'-anomaly for variable 'C' (lines '561'-'561').
3259	src/jama/Matrix.java	561	Found 'DU'-anomaly for variable 'C' (lines '561'-'565').
3260	src/jama/Matrix.java	590	Found 'DD'-anomaly for variable 'C' (lines '590'-'593').
3261	src/jama/Matrix.java	590	Found 'DU'-anomaly for variable 'C' (lines '590'-'597').
3262	src/jama/Matrix.java	593	Found 'DD'-anomaly for variable 'C' (lines '593'-'593').
3263	src/jama/Matrix.java	593	Found 'DU'-anomaly for variable 'C' (lines '593'-'597').
3264	src/jama/Matrix.java	622	Found 'DD'-anomaly for variable 'C' (lines '622'-'625').
3265	src/jama/Matrix.java	622	Found 'DU'-anomaly for variable 'C' (lines '622'-'629').
3266	src/jama/Matrix.java	625	Found 'DD'-anomaly for variable 'C' (lines '625'-'625').
3267	src/jama/Matrix.java	625	Found 'DU'-anomaly for variable 'C' (lines '625'-'629').
3268	src/jama/Matrix.java	654	Found 'DD'-anomaly for variable 'C' (lines '654'-'657').
3269	src/jama/Matrix.java	654	Found 'DU'-anomaly for variable 'C' (lines '654'-'661').
3270	src/jama/Matrix.java	657	Found 'DD'-anomaly for variable 'C' (lines '657'-'657').
3271	src/jama/Matrix.java	657	Found 'DU'-anomaly for variable 'C' (lines '657'-'661').
3272	src/jama/Matrix.java	686	Found 'DD'-anomaly for variable 'C' (lines '686'-'689').
3273	src/jama/Matrix.java	686	Found 'DU'-anomaly for variable 'C' (lines '686'-'693').
3274	src/jama/Matrix.java	689	Found 'DD'-anomaly for variable 'C' (lines '689'-'689').
3275	src/jama/Matrix.java	689	Found 'DU'-anomaly for variable 'C' (lines '689'-'693').
3276	src/jama/Matrix.java	717	Found 'DD'-anomaly for variable 'C' (lines '717'-'720').
3277	src/jama/Matrix.java	717	Found 'DU'-anomaly for variable 'C' (lines '717'-'724').
3278	src/jama/Matrix.java	720	Found 'DD'-anomaly for variable 'C' (lines '720'-'720').
3279	src/jama/Matrix.java	720	Found 'DU'-anomaly for variable 'C' (lines '720'-'724').
3280	src/jama/Matrix.java	751	Found 'DD'-anomaly for variable 'C' (lines '751'-'763').
3281	src/jama/Matrix.java	751	Found 'DU'-anomaly for variable 'C' (lines '751'-'767').
3282	src/jama/Matrix.java	752	Found 'DD'-anomaly for variable 'Bcolj' (lines '752'-'755').
3283	src/jama/Matrix.java	752	Found 'DU'-anomaly for variable 'Bcolj' (lines '752'-'767').
3284	src/jama/Matrix.java	755	Found 'DD'-anomaly for variable 'Bcolj' (lines '755'-'755').
3285	src/jama/Matrix.java	755	Found 'DU'-anomaly for variable 'Bcolj' (lines '755'-'767').
3286	src/jama/Matrix.java	758	Found 'DD'-anomaly for variable 'Arowi' (lines '758'-'758').
3287	src/jama/Matrix.java	758	Found 'DU'-anomaly for variable 'Arowi' (lines '758'-'767').
3288	src/jama/Matrix.java	763	Found 'DD'-anomaly for variable 'C' (lines '763'-'763').
3289	src/jama/Matrix.java	763	Found 'DU'-anomaly for variable 'C' (lines '763'-'767').
3290	src/jama/Matrix.java	774	Avoid using short method names
3291	src/jama/Matrix.java	783	Avoid using short method names
3292	src/jama/Matrix.java	820	This statement may have some unnecessary parentheses
3293	src/jama/Matrix.java	885	Found 'DD'-anomaly for variable 'X' (lines '885'-'888').
3294	src/jama/Matrix.java	885	Found 'DU'-anomaly for variable 'X' (lines '885'-'892').
3295	src/jama/Matrix.java	888	Found 'DD'-anomaly for variable 'X' (lines '888'-'888').
3296	src/jama/Matrix.java	888	Found 'DU'-anomaly for variable 'X' (lines '888'-'892').
3297	src/jama/Matrix.java	902	Found 'DD'-anomaly for variable 'X' (lines '902'-'905').
3298	src/jama/Matrix.java	902	Found 'DU'-anomaly for variable 'X' (lines '902'-'909').
3299	src/jama/Matrix.java	905	Found 'DD'-anomaly for variable 'X' (lines '905'-'905').
3300	src/jama/Matrix.java	905	Found 'DU'-anomaly for variable 'X' (lines '905'-'909').
3301	src/jama/Matrix.java	973	Avoid using for statements without curly braces
3302	src/jama/Matrix.java	1003	Found 'DU'-anomaly for variable 'v' (lines '1,003'-'1,035').
3303	src/jama/Matrix.java	1003	Use ArrayList instead of Vector
3304	src/jama/Matrix.java	1006	Avoid empty while statements
3305	src/jama/Matrix.java	1006	Avoid using while statements without curly braces
3306	src/jama/Matrix.java	1007	Avoid using if statements without curly braces
3307	src/jama/Matrix.java	1014	Found 'DD'-anomaly for variable 'row' (lines '1,014'-'1,016').
3308	src/jama/Matrix.java	1015	Avoid using for statements without curly braces
3309	src/jama/Matrix.java	1016	Found 'DD'-anomaly for variable 'row' (lines '1,016'-'1,016').
3310	src/jama/Matrix.java	1021	Avoid instantiating new objects inside loops
3311	src/jama/Matrix.java	1021	Found 'DD'-anomaly for variable 'row' (lines '1,021'-'1,026').
3312	src/jama/Matrix.java	1021	Found 'DU'-anomaly for variable 'row' (lines '1,021'-'1,035').
3313	src/jama/Matrix.java	1024	Avoid using if statements without curly braces
3314	src/jama/Matrix.java	1026	Found 'DD'-anomaly for variable 'row' (lines '1,026'-'1,021').
3315	src/jama/Matrix.java	1026	Found 'DD'-anomaly for variable 'row' (lines '1,026'-'1,026').
3316	src/jama/Matrix.java	1026	Found 'DU'-anomaly for variable 'row' (lines '1,026'-'1,035').
3317	src/jama/Matrix.java	1026	Unnecessary wrapper object creation
3318	src/jama/Matrix.java	1028	Avoid using if statements without curly braces
3319	src/jama/QRDecomposition.java	17	Classes implementing Serializable should set a serialVersionUID
3320	src/jama/QRDecomposition.java	17	The class 'QRDecomposition' has a Cyclomatic Complexity of 7 (Highest = 11).
3321	src/jama/QRDecomposition.java	26	Avoid variables with short names like QR
3322	src/jama/QRDecomposition.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
3323	src/jama/QRDecomposition.java	26	Private field 'QR' could be made final; it is only initialized in the declaration or constructor.
3324	src/jama/QRDecomposition.java	26	The field name indicates a constant but its modifiers do not
3325	src/jama/QRDecomposition.java	32	Avoid variables with short names like m
3326	src/jama/QRDecomposition.java	32	Avoid variables with short names like n
3327	src/jama/QRDecomposition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3328	src/jama/QRDecomposition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3329	src/jama/QRDecomposition.java	32	Private field 'm' could be made final; it is only initialized in the declaration or constructor.
3330	src/jama/QRDecomposition.java	32	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
3331	src/jama/QRDecomposition.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
3332	src/jama/QRDecomposition.java	37	Private field 'Rdiag' could be made final; it is only initialized in the declaration or constructor.
3333	src/jama/QRDecomposition.java	48	Avoid variables with short names like A
3334	src/jama/QRDecomposition.java	48	Parameter 'A' is not assigned and could be declared final
3335	src/jama/QRDecomposition.java	75	Avoid variables with short names like s
3336	src/jama/QRDecomposition.java	99	Avoid using if statements without curly braces
3337	src/jama/QRDecomposition.java	100	A method should have only one exit point, and that should be the last statement in the method
3338	src/jama/QRDecomposition.java	110	Local variable 'X' could be declared final
3339	src/jama/QRDecomposition.java	111	Found 'DD'-anomaly for variable 'H' (lines '111'-'115').
3340	src/jama/QRDecomposition.java	111	Found 'DD'-anomaly for variable 'H' (lines '111'-'117').
3341	src/jama/QRDecomposition.java	111	Found 'DU'-anomaly for variable 'H' (lines '111'-'122').
3342	src/jama/QRDecomposition.java	115	Found 'DD'-anomaly for variable 'H' (lines '115'-'115').
3343	src/jama/QRDecomposition.java	115	Found 'DD'-anomaly for variable 'H' (lines '115'-'117').
3344	src/jama/QRDecomposition.java	115	Found 'DU'-anomaly for variable 'H' (lines '115'-'122').
3345	src/jama/QRDecomposition.java	117	Found 'DD'-anomaly for variable 'H' (lines '117'-'115').
3346	src/jama/QRDecomposition.java	117	Found 'DD'-anomaly for variable 'H' (lines '117'-'117').
3347	src/jama/QRDecomposition.java	117	Found 'DU'-anomaly for variable 'H' (lines '117'-'122').
3348	src/jama/QRDecomposition.java	129	Local variable 'X' could be declared final
3349	src/jama/QRDecomposition.java	130	Found 'DD'-anomaly for variable 'R' (lines '130'-'134').
3350	src/jama/QRDecomposition.java	130	Found 'DD'-anomaly for variable 'R' (lines '130'-'136').
3351	src/jama/QRDecomposition.java	130	Found 'DD'-anomaly for variable 'R' (lines '130'-'138').
3352	src/jama/QRDecomposition.java	130	Found 'DU'-anomaly for variable 'R' (lines '130'-'143').
3353	src/jama/QRDecomposition.java	134	Found 'DD'-anomaly for variable 'R' (lines '134'-'134').
3354	src/jama/QRDecomposition.java	134	Found 'DD'-anomaly for variable 'R' (lines '134'-'136').
3355	src/jama/QRDecomposition.java	134	Found 'DD'-anomaly for variable 'R' (lines '134'-'138').
3356	src/jama/QRDecomposition.java	134	Found 'DU'-anomaly for variable 'R' (lines '134'-'143').
3357	src/jama/QRDecomposition.java	136	Found 'DD'-anomaly for variable 'R' (lines '136'-'134').
3358	src/jama/QRDecomposition.java	136	Found 'DD'-anomaly for variable 'R' (lines '136'-'136').
3359	src/jama/QRDecomposition.java	136	Found 'DD'-anomaly for variable 'R' (lines '136'-'138').
3360	src/jama/QRDecomposition.java	136	Found 'DU'-anomaly for variable 'R' (lines '136'-'143').
3361	src/jama/QRDecomposition.java	138	Found 'DD'-anomaly for variable 'R' (lines '138'-'134').
3362	src/jama/QRDecomposition.java	138	Found 'DD'-anomaly for variable 'R' (lines '138'-'136').
3363	src/jama/QRDecomposition.java	138	Found 'DD'-anomaly for variable 'R' (lines '138'-'138').
3364	src/jama/QRDecomposition.java	138	Found 'DU'-anomaly for variable 'R' (lines '138'-'143').
3365	src/jama/QRDecomposition.java	150	Local variable 'X' could be declared final
3366	src/jama/QRDecomposition.java	151	Found 'DD'-anomaly for variable 'Q' (lines '151'-'154').
3367	src/jama/QRDecomposition.java	154	Found 'DD'-anomaly for variable 'Q' (lines '154'-'154').
3368	src/jama/QRDecomposition.java	154	Found 'DD'-anomaly for variable 'Q' (lines '154'-'156').
3369	src/jama/QRDecomposition.java	156	Found 'DD'-anomaly for variable 'Q' (lines '156'-'154').
3370	src/jama/QRDecomposition.java	156	Found 'DD'-anomaly for variable 'Q' (lines '156'-'156').
3371	src/jama/QRDecomposition.java	156	Found 'DU'-anomaly for variable 'Q' (lines '156'-'171').
3372	src/jama/QRDecomposition.java	159	Found 'DD'-anomaly for variable 's' (lines '159'-'163').
3373	src/jama/QRDecomposition.java	180	Parameter 'B' is not assigned and could be declared final
3374	src/jama/QRDecomposition.java	180	The method 'solve' has a Cyclomatic Complexity of 11.
3375	src/jama/QRDecomposition.java	185	Avoid throwing raw exception types.
3376	src/jama/QRDecomposition.java	189	Local variable 'nx' could be declared final
3377	src/jama/QRDecomposition.java	195	Found 'DD'-anomaly for variable 's' (lines '195'-'199').
3378	src/jama/QRDecomposition.java	216	This statement may have some unnecessary parentheses
3379	src/jama/SingularValueDecomposition.java	18	Classes implementing Serializable should set a serialVersionUID
3380	src/jama/SingularValueDecomposition.java	18	The class 'SingularValueDecomposition' has a Cyclomatic Complexity of 13 (Highest = 91).
3381	src/jama/SingularValueDecomposition.java	28	Avoid variables with short names like U
3382	src/jama/SingularValueDecomposition.java	28	Avoid variables with short names like V
3383	src/jama/SingularValueDecomposition.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
3384	src/jama/SingularValueDecomposition.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
3385	src/jama/SingularValueDecomposition.java	28	Private field 'U' could be made final; it is only initialized in the declaration or constructor.
3386	src/jama/SingularValueDecomposition.java	28	Private field 'V' could be made final; it is only initialized in the declaration or constructor.
3387	src/jama/SingularValueDecomposition.java	28	The field name indicates a constant but its modifiers do not
3388	src/jama/SingularValueDecomposition.java	33	Avoid variables with short names like s
3389	src/jama/SingularValueDecomposition.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
3390	src/jama/SingularValueDecomposition.java	39	Avoid variables with short names like m
3391	src/jama/SingularValueDecomposition.java	39	Avoid variables with short names like n
3392	src/jama/SingularValueDecomposition.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
3393	src/jama/SingularValueDecomposition.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
3394	src/jama/SingularValueDecomposition.java	39	Private field 'm' could be made final; it is only initialized in the declaration or constructor.
3395	src/jama/SingularValueDecomposition.java	39	Private field 'n' could be made final; it is only initialized in the declaration or constructor.
3396	src/jama/SingularValueDecomposition.java	50	Parameter 'Arg' is not assigned and could be declared final
3397	src/jama/SingularValueDecomposition.java	50	The constructor 'SingularValueDecomposition' has a Cyclomatic Complexity of 91.
3398	src/jama/SingularValueDecomposition.java	50	The constructor with 1 parameters has an NCSS line count of 245
3399	src/jama/SingularValueDecomposition.java	57	Local variable 'nu' could be declared final
3400	src/jama/SingularValueDecomposition.java	63	Local variable 'wantu' could be declared final
3401	src/jama/SingularValueDecomposition.java	64	Local variable 'wantv' could be declared final
3402	src/jama/SingularValueDecomposition.java	69	Local variable 'nct' could be declared final
3403	src/jama/SingularValueDecomposition.java	70	Local variable 'nrt' could be declared final
3404	src/jama/SingularValueDecomposition.java	82	Deeply nested if..then statements are hard to read
3405	src/jama/SingularValueDecomposition.java	131	Deeply nested if..then statements are hard to read
3406	src/jama/SingularValueDecomposition.java	164	System.arraycopy is more efficient
3407	src/jama/SingularValueDecomposition.java	195	Avoid if (x != y) ..; else ..;
3408	src/jama/SingularValueDecomposition.java	282	Avoid if (x != y) ..; else ..;
3409	src/jama/SingularValueDecomposition.java	283	Avoid if (x != y) ..; else ..;
3410	src/jama/SingularValueDecomposition.java	302	A high ratio of statements to labels in a switch statement. Consider refactoring.
3411	src/jama/SingularValueDecomposition.java	302	Switch statements should have a default label
3412	src/jama/SingularValueDecomposition.java	489	Returning 's' may expose an internal array.
3413	src/jama/SingularValueDecomposition.java	498	Found 'DD'-anomaly for variable 'S' (lines '498'-'501').
3414	src/jama/SingularValueDecomposition.java	498	Found 'DD'-anomaly for variable 'S' (lines '498'-'503').
3415	src/jama/SingularValueDecomposition.java	498	Found 'DU'-anomaly for variable 'S' (lines '498'-'506').
3416	src/jama/SingularValueDecomposition.java	501	Found 'DD'-anomaly for variable 'S' (lines '501'-'501').
3417	src/jama/SingularValueDecomposition.java	501	Found 'DD'-anomaly for variable 'S' (lines '501'-'503').
3418	src/jama/SingularValueDecomposition.java	503	Found 'DD'-anomaly for variable 'S' (lines '503'-'501').
3419	src/jama/SingularValueDecomposition.java	503	Found 'DD'-anomaly for variable 'S' (lines '503'-'503').
3420	src/jama/SingularValueDecomposition.java	503	Found 'DU'-anomaly for variable 'S' (lines '503'-'506').
3421	src/jama/SingularValueDecomposition.java	530	Found 'DU'-anomaly for variable 'tol' (lines '530'-'538').
3422	src/jama/SingularValueDecomposition.java	531	Found 'DD'-anomaly for variable 'r' (lines '531'-'534').
3423	src/jama/SingularValueDecomposition.java	534	Found 'DD'-anomaly for variable 'r' (lines '534'-'534').
3424	src/jama/util/Maths.java	3	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
3425	src/jama/util/Maths.java	7	Avoid variables with short names like a
3426	src/jama/util/Maths.java	7	Avoid variables with short names like b
3427	src/jama/util/Maths.java	7	Parameter 'a' is not assigned and could be declared final
3428	src/jama/util/Maths.java	7	Parameter 'b' is not assigned and could be declared final
3429	src/jama/util/Maths.java	8	Avoid variables with short names like r
3430	src/jama/util/Maths.java	10	Found 'DD'-anomaly for variable 'r' (lines '10'-'11').
3431	src/jama/util/Maths.java	12	Avoid if (x != y) ..; else ..;
3432	src/jama/util/Maths.java	13	Found 'DD'-anomaly for variable 'r' (lines '13'-'14').
3433	src/java_cup/runtime/Scanner.java	20	Avoid modifiers which are implied by the context
3434	src/java_cup/runtime/Scanner.java	20	Method names should not contain underscores
3435	src/java_cup/runtime/Symbol.java	29	Avoid variables with short names like id
3436	src/java_cup/runtime/Symbol.java	29	Avoid variables with short names like l
3437	src/java_cup/runtime/Symbol.java	29	Avoid variables with short names like o
3438	src/java_cup/runtime/Symbol.java	29	Avoid variables with short names like r
3439	src/java_cup/runtime/Symbol.java	29	Parameter 'id' is not assigned and could be declared final
3440	src/java_cup/runtime/Symbol.java	29	Parameter 'l' is not assigned and could be declared final
3441	src/java_cup/runtime/Symbol.java	29	Parameter 'o' is not assigned and could be declared final
3442	src/java_cup/runtime/Symbol.java	29	Parameter 'r' is not assigned and could be declared final
3443	src/java_cup/runtime/Symbol.java	40	Avoid variables with short names like id
3444	src/java_cup/runtime/Symbol.java	40	Parameter 'id' is not assigned and could be declared final
3445	src/java_cup/runtime/Symbol.java	55	Assigning an Object to null is a code smell. Consider refactoring.
3446	src/java_cup/runtime/Symbol.java	66	Assigning an Object to null is a code smell. Consider refactoring.
3447	src/java_cup/runtime/Symbol.java	81	Found non-transient, non-static member. Please mark as transient or provide accessors.
3448	src/java_cup/runtime/Symbol.java	89	Found non-transient, non-static member. Please mark as transient or provide accessors.
3449	src/java_cup/runtime/Symbol.java	89	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3450	src/java_cup/runtime/Symbol.java	92	Use explicit scoping instead of the default package private level
3451	src/java_cup/runtime/Symbol.java	92	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3452	src/java_cup/runtime/Symbol.java	98	Found non-transient, non-static member. Please mark as transient or provide accessors.
3453	src/java_cup/runtime/Symbol.java	98	Found non-transient, non-static member. Please mark as transient or provide accessors.
3454	src/java_cup/runtime/Symbol.java	99	Found non-transient, non-static member. Please mark as transient or provide accessors.
3455	src/java_cup/runtime/lr_parser.java	115	Abstract classes should be named AbstractXXX
3456	src/java_cup/runtime/lr_parser.java	115	Avoid really long classes.
3457	src/java_cup/runtime/lr_parser.java	115	Class names should begin with an uppercase character
3458	src/java_cup/runtime/lr_parser.java	115	The class 'lr_parser' has a Cyclomatic Complexity of 3 (Highest = 13).
3459	src/java_cup/runtime/lr_parser.java	115	This class has too many methods, consider refactoring it.
3460	src/java_cup/runtime/lr_parser.java	128	Avoid variables with short names like s
3461	src/java_cup/runtime/lr_parser.java	128	Parameter 's' is not assigned and could be declared final
3462	src/java_cup/runtime/lr_parser.java	130	Overridable method 'setScanner' called during object construction
3463	src/java_cup/runtime/lr_parser.java	140	Variables that are final and static should be in all caps.
3464	src/java_cup/runtime/lr_parser.java	147	Method names should not contain underscores
3465	src/java_cup/runtime/lr_parser.java	160	Do not use the short type
3466	src/java_cup/runtime/lr_parser.java	160	Method names should not contain underscores
3467	src/java_cup/runtime/lr_parser.java	178	Do not use the short type
3468	src/java_cup/runtime/lr_parser.java	178	Method names should not contain underscores
3469	src/java_cup/runtime/lr_parser.java	195	Do not use the short type
3470	src/java_cup/runtime/lr_parser.java	195	Method names should not contain underscores
3471	src/java_cup/runtime/lr_parser.java	200	Method names should not contain underscores
3472	src/java_cup/runtime/lr_parser.java	222	Found non-transient, non-static member. Please mark as transient or provide accessors.
3473	src/java_cup/runtime/lr_parser.java	222	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3474	src/java_cup/runtime/lr_parser.java	241	Found non-transient, non-static member. Please mark as transient or provide accessors.
3475	src/java_cup/runtime/lr_parser.java	246	Found non-transient, non-static member. Please mark as transient or provide accessors.
3476	src/java_cup/runtime/lr_parser.java	246	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3477	src/java_cup/runtime/lr_parser.java	251	Found non-transient, non-static member. Please mark as transient or provide accessors.
3478	src/java_cup/runtime/lr_parser.java	256	Do not use the short type
3479	src/java_cup/runtime/lr_parser.java	256	Found non-transient, non-static member. Please mark as transient or provide accessors.
3480	src/java_cup/runtime/lr_parser.java	261	Do not use the short type
3481	src/java_cup/runtime/lr_parser.java	273	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3482	src/java_cup/runtime/lr_parser.java	278	Avoid variables with short names like s
3483	src/java_cup/runtime/lr_parser.java	278	Parameter 's' is not assigned and could be declared final
3484	src/java_cup/runtime/lr_parser.java	314	An empty method in an abstract class should be abstract instead
3485	src/java_cup/runtime/lr_parser.java	314	Document empty method
3486	src/java_cup/runtime/lr_parser.java	349	Parameter 'message' is not assigned and could be declared final
3487	src/java_cup/runtime/lr_parser.java	350	Parameter 'info' is not assigned and could be declared final
3488	src/java_cup/runtime/lr_parser.java	360	Avoid throwing raw exception types.
3489	src/java_cup/runtime/lr_parser.java	374	Parameter 'info' is not assigned and could be declared final
3490	src/java_cup/runtime/lr_parser.java	376	System.out.print is used
3491	src/java_cup/runtime/lr_parser.java	378	Avoid if (x != y) ..; else ..;
3492	src/java_cup/runtime/lr_parser.java	379	Avoid using if...else statements without curly braces
3493	src/java_cup/runtime/lr_parser.java	379	System.out.print is used
3494	src/java_cup/runtime/lr_parser.java	381	Avoid using if...else statements without curly braces
3495	src/java_cup/runtime/lr_parser.java	381	System.out.print is used
3496	src/java_cup/runtime/lr_parser.java	382	Avoid using if...else statements without curly braces
3497	src/java_cup/runtime/lr_parser.java	382	System.out.print is used
3498	src/java_cup/runtime/lr_parser.java	427	Local variable 'row' could be declared final
3499	src/java_cup/runtime/lr_parser.java	431	Avoid using if...else statements without curly braces
3500	src/java_cup/runtime/lr_parser.java	438	A method should have only one exit point, and that should be the last statement in the method
3501	src/java_cup/runtime/lr_parser.java	450	A method should have only one exit point, and that should be the last statement in the method
3502	src/java_cup/runtime/lr_parser.java	450	Avoid using if...else statements without curly braces
3503	src/java_cup/runtime/lr_parser.java	458	A method should have only one exit point, and that should be the last statement in the method
3504	src/java_cup/runtime/lr_parser.java	481	Local variable 'row' could be declared final
3505	src/java_cup/runtime/lr_parser.java	484	Avoid using if statements without curly braces
3506	src/java_cup/runtime/lr_parser.java	485	A method should have only one exit point, and that should be the last statement in the method
3507	src/java_cup/runtime/lr_parser.java	494	A method should have only one exit point, and that should be the last statement in the method
3508	src/java_cup/runtime/lr_parser.java	509	Avoid really long methods.
3509	src/java_cup/runtime/lr_parser.java	515	Found 'DD'-anomaly for variable 'lhs_sym' (lines '515'-'568').
3510	src/java_cup/runtime/lr_parser.java	515	Found 'DD'-anomaly for variable 'lhs_sym' (lines '515'-'605').
3511	src/java_cup/runtime/lr_parser.java	515	Found 'DU'-anomaly for variable 'lhs_sym' (lines '515'-'610').
3512	src/java_cup/runtime/lr_parser.java	544	Avoid using if statements without curly braces
3513	src/java_cup/runtime/lr_parser.java	545	Avoid throwing raw exception types.
3514	src/java_cup/runtime/lr_parser.java	597	Avoid if (x != y) ..; else ..;
3515	src/java_cup/runtime/lr_parser.java	605	Found 'DD'-anomaly for variable 'lhs_sym' (lines '605'-'568').
3516	src/java_cup/runtime/lr_parser.java	605	Found 'DD'-anomaly for variable 'lhs_sym' (lines '605'-'605').
3517	src/java_cup/runtime/lr_parser.java	605	Found 'DU'-anomaly for variable 'lhs_sym' (lines '605'-'610').
3518	src/java_cup/runtime/lr_parser.java	621	System.out.print is used
3519	src/java_cup/runtime/lr_parser.java	677	Avoid variables with short names like sb
3520	src/java_cup/runtime/lr_parser.java	677	Found 'DU'-anomaly for variable 'sb' (lines '677'-'686').
3521	src/java_cup/runtime/lr_parser.java	679	Avoid variables with short names like s
3522	src/java_cup/runtime/lr_parser.java	679	Local variable 's' could be declared final
3523	src/java_cup/runtime/lr_parser.java	683	Avoid instantiating new objects inside loops
3524	src/java_cup/runtime/lr_parser.java	683	Found 'DU'-anomaly for variable 'sb' (lines '683'-'686').
3525	src/java_cup/runtime/lr_parser.java	695	Avoid really long methods.
3526	src/java_cup/runtime/lr_parser.java	702	Found 'DD'-anomaly for variable 'lhs_sym' (lines '702'-'761').
3527	src/java_cup/runtime/lr_parser.java	702	Found 'DD'-anomaly for variable 'lhs_sym' (lines '702'-'805').
3528	src/java_cup/runtime/lr_parser.java	702	Found 'DU'-anomaly for variable 'lhs_sym' (lines '702'-'810').
3529	src/java_cup/runtime/lr_parser.java	734	Avoid using if statements without curly braces
3530	src/java_cup/runtime/lr_parser.java	735	Avoid throwing raw exception types.
3531	src/java_cup/runtime/lr_parser.java	797	Avoid if (x != y) ..; else ..;
3532	src/java_cup/runtime/lr_parser.java	805	Found 'DD'-anomaly for variable 'lhs_sym' (lines '805'-'761').
3533	src/java_cup/runtime/lr_parser.java	805	Found 'DD'-anomaly for variable 'lhs_sym' (lines '805'-'805').
3534	src/java_cup/runtime/lr_parser.java	805	Found 'DU'-anomaly for variable 'lhs_sym' (lines '805'-'810').
3535	src/java_cup/runtime/lr_parser.java	838	The method 'error_recovery' has a Cyclomatic Complexity of 11.
3536	src/java_cup/runtime/lr_parser.java	838	The method error_recovery() has an NPath complexity of 300
3537	src/java_cup/runtime/lr_parser.java	841	Avoid using if statements without curly braces
3538	src/java_cup/runtime/lr_parser.java	847	Avoid using if statements without curly braces
3539	src/java_cup/runtime/lr_parser.java	915	Found 'DU'-anomaly for variable 'right_pos' (lines '915'-'953').
3540	src/java_cup/runtime/lr_parser.java	915	Local variable 'right_pos' could be declared final
3541	src/java_cup/runtime/lr_parser.java	916	Found 'DD'-anomaly for variable 'left_pos' (lines '916'-'925').
3542	src/java_cup/runtime/lr_parser.java	925	Found 'DD'-anomaly for variable 'left_pos' (lines '925'-'925').
3543	src/java_cup/runtime/lr_parser.java	925	Found 'DU'-anomaly for variable 'left_pos' (lines '925'-'953').
3544	src/java_cup/runtime/lr_parser.java	961	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3545	src/java_cup/runtime/lr_parser.java	1011	Avoid using for statements without curly braces
3546	src/java_cup/runtime/lr_parser.java	1033	The method 'try_parse_ahead' has a Cyclomatic Complexity of 11.
3547	src/java_cup/runtime/lr_parser.java	1040	Found 'DU'-anomaly for variable 'vstack' (lines '1,040'-'1,091').
3548	src/java_cup/runtime/lr_parser.java	1040	Local variable 'vstack' could be declared final
3549	src/java_cup/runtime/lr_parser.java	1078	Avoid using for statements without curly braces
3550	src/java_cup/runtime/lr_parser.java	1104	Avoid really long methods.
3551	src/java_cup/runtime/lr_parser.java	1104	The method 'parse_lookahead' has a Cyclomatic Complexity of 13.
3552	src/java_cup/runtime/lr_parser.java	1111	Found 'DD'-anomaly for variable 'lhs_sym' (lines '1,111'-'1,168').
3553	src/java_cup/runtime/lr_parser.java	1111	Found 'DU'-anomaly for variable 'lhs_sym' (lines '1,111'-'1,205').
3554	src/java_cup/runtime/lr_parser.java	1210	Avoid variables with short names like sa
3555	src/java_cup/runtime/lr_parser.java	1214	Avoid using for statements without curly braces
3556	src/java_cup/runtime/lr_parser.java	1218	Found 'DD'-anomaly for variable 'result' (lines '1,218'-'1,221').
3557	src/java_cup/runtime/lr_parser.java	1221	Avoid instantiating new objects inside loops
3558	src/java_cup/runtime/lr_parser.java	1221	Found 'DD'-anomaly for variable 'result' (lines '1,221'-'1,221').
3559	src/java_cup/runtime/lr_parser.java	1221	Found 'DD'-anomaly for variable 'result' (lines '1,221'-'1,223').
3560	src/java_cup/runtime/lr_parser.java	1222	Avoid using for statements without curly braces
3561	src/java_cup/runtime/lr_parser.java	1223	Found 'DD'-anomaly for variable 'result' (lines '1,223'-'1,221').
3562	src/java_cup/runtime/lr_parser.java	1223	Found 'DD'-anomaly for variable 'result' (lines '1,223'-'1,223').
3563	src/java_cup/runtime/virtual_parse_stack.java	22	Class names should begin with an uppercase character
3564	src/java_cup/runtime/virtual_parse_stack.java	28	Parameter 'shadowing_stack' is not assigned and could be declared final
3565	src/java_cup/runtime/virtual_parse_stack.java	31	Avoid using if statements without curly braces
3566	src/java_cup/runtime/virtual_parse_stack.java	32	Avoid throwing raw exception types.
3567	src/java_cup/runtime/virtual_parse_stack.java	41	Overridable method 'get_from_real' called during object construction
3568	src/java_cup/runtime/virtual_parse_stack.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
3569	src/java_cup/runtime/virtual_parse_stack.java	52	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3570	src/java_cup/runtime/virtual_parse_stack.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
3571	src/java_cup/runtime/virtual_parse_stack.java	60	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
3572	src/java_cup/runtime/virtual_parse_stack.java	70	Found non-transient, non-static member. Please mark as transient or provide accessors.
3573	src/java_cup/runtime/virtual_parse_stack.java	79	Method names should not contain underscores
3574	src/java_cup/runtime/virtual_parse_stack.java	84	Avoid using if statements without curly braces
3575	src/java_cup/runtime/virtual_parse_stack.java	93	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
3576	src/java_cup/runtime/virtual_parse_stack.java	111	Avoid using if statements without curly braces
3577	src/java_cup/runtime/virtual_parse_stack.java	112	Avoid throwing raw exception types.
3578	src/java_cup/runtime/virtual_parse_stack.java	123	Avoid using if statements without curly braces
3579	src/java_cup/runtime/virtual_parse_stack.java	124	Avoid throwing raw exception types.
3580	src/java_cup/runtime/virtual_parse_stack.java	131	Avoid using if statements without curly braces
3581	src/java_cup/runtime/virtual_parse_stack.java	138	Parameter 'state_num' is not assigned and could be declared final
3582	src/java_cup/runtime/virtual_parse_stack.java	140	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
3583	src/pipe/common/AnalysisInstruction.java	26	A method should have only one exit point, and that should be the last statement in the method
3584	src/pipe/common/AnalysisSettings.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
3585	src/pipe/common/AnalysisSettings.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
3586	src/pipe/common/AnalysisSettings.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
3587	src/pipe/common/AnalysisSettings.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
3588	src/pipe/common/AnalysisSettings.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
3589	src/pipe/common/AnalysisSettings.java	26	Avoid excessively long variable names like clientLoggingLevel
3590	src/pipe/common/AnalysisSettings.java	26	Avoid excessively long variable names like serverLoggingLevel
3591	src/pipe/common/AnalysisSettings.java	41	Assigning an Object to null is a code smell. Consider refactoring.
3592	src/pipe/common/AnalysisSettings.java	49	Avoid really long parameter lists.
3593	src/pipe/common/AnalysisSettings.java	58	Avoid excessively long variable names like usingServerLogging
3594	src/pipe/common/AnalysisSettings.java	59	Avoid excessively long variable names like usingClientLogging
3595	src/pipe/common/Cleanable.java	13	Avoid modifiers which are implied by the context
3596	src/pipe/common/Cleanable.java	15	Avoid modifiers which are implied by the context
3597	src/pipe/common/EvaluationStatus.java	22	A method should have only one exit point, and that should be the last statement in the method
3598	src/pipe/common/EvaluationStatus.java	24	A method should have only one exit point, and that should be the last statement in the method
3599	src/pipe/common/EvaluationStatus.java	26	A method should have only one exit point, and that should be the last statement in the method
3600	src/pipe/common/EvaluationStatus.java	28	A method should have only one exit point, and that should be the last statement in the method
3601	src/pipe/common/EvaluationStatus.java	30	A method should have only one exit point, and that should be the last statement in the method
3602	src/pipe/common/LoggingHelper.java	28	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
3603	src/pipe/common/LoggingHelper.java	29	To be compliant to J2EE, a webapp should not use any thread.
3604	src/pipe/common/LoggingHelper.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
3605	src/pipe/common/LoggingHelper.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
3606	src/pipe/common/LoggingHelper.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
3607	src/pipe/common/LoggingHelper.java	34	The Logger variable declaration does not contain the static and final modifiers
3608	src/pipe/common/LoggingHelper.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
3609	src/pipe/common/LoggingHelper.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
3610	src/pipe/common/LoggingHelper.java	38	It is a good practice to call super() in a constructor
3611	src/pipe/common/LoggingHelper.java	58	Avoid variables with short names like sh
3612	src/pipe/common/LoggingHelper.java	59	Avoid using ThreadGroup; it is not thread safe
3613	src/pipe/common/LoggingHelper.java	60	Avoid variables with short names like l
3614	src/pipe/common/LoggingHelper.java	80	Avoid variables with short names like e
3615	src/pipe/common/LoggingHelper.java	83	Avoid variables with short names like p
3616	src/pipe/common/LoggingHelper.java	98	Avoid variables with short names like ch
3617	src/pipe/common/LoggingHelper.java	99	Avoid using ThreadGroup; it is not thread safe
3618	src/pipe/common/LoggingHelper.java	122	Avoid using ThreadGroup; it is not thread safe
3619	src/pipe/common/LoggingHelper.java	133	To be compliant to J2EE, a webapp should not use any thread.
3620	src/pipe/common/LoggingHelper.java	143	Avoid using ThreadGroup; it is not thread safe
3621	src/pipe/common/PTArithComp.java	15	A method should have only one exit point, and that should be the last statement in the method
3622	src/pipe/common/PTArithComp.java	19	A method should have only one exit point, and that should be the last statement in the method
3623	src/pipe/common/PTArithComp.java	23	A method should have only one exit point, and that should be the last statement in the method
3624	src/pipe/common/PTArithComp.java	27	A method should have only one exit point, and that should be the last statement in the method
3625	src/pipe/common/PTArithOp.java	15	A method should have only one exit point, and that should be the last statement in the method
3626	src/pipe/common/PTArithOp.java	19	A method should have only one exit point, and that should be the last statement in the method
3627	src/pipe/common/PTArithOp.java	23	A method should have only one exit point, and that should be the last statement in the method
3628	src/pipe/common/PTArithOp.java	27	A method should have only one exit point, and that should be the last statement in the method
3629	src/pipe/common/PTDisCon.java	13	Avoid using if statements without curly braces
3630	src/pipe/common/PTDisCon.java	14	A method should have only one exit point, and that should be the last statement in the method
3631	src/pipe/common/PTNode.java	10	The class 'PTNode' has a Cyclomatic Complexity of 6(Highest = 28).
3632	src/pipe/common/PTNode.java	30	A switch statement does not contain a break
3633	src/pipe/common/PTNode.java	52	A method should have only one exit point, and that should be the last statement in the method
3634	src/pipe/common/PTNode.java	60	A switch statement does not contain a break
3635	src/pipe/common/PTNode.java	64	A method should have only one exit point, and that should be the last statement in the method
3636	src/pipe/common/PTNode.java	76	The method 'toString' has a Cyclomatic Complexity of 28.
3637	src/pipe/common/PTNode.java	81	A method should have only one exit point, and that should be the last statement in the method
3638	src/pipe/common/PTNode.java	83	A method should have only one exit point, and that should be the last statement in the method
3639	src/pipe/common/PTNode.java	85	A method should have only one exit point, and that should be the last statement in the method
3640	src/pipe/common/PTNode.java	141	A switch statement does not contain a break
3641	src/pipe/common/PTNode.java	157	A switch statement does not contain a break
3642	src/pipe/common/PerformanceMeasure.java	9	Avoid using implementation types like 'ArrayList'; use the interface instead
3643	src/pipe/common/PerformanceMeasure.java	9	Avoid using implementation types like 'ArrayList'; use the interface instead
3644	src/pipe/common/PerformanceMeasure.java	9	Found non-transient, non-static member. Please mark as transient or provide accessors.
3645	src/pipe/common/PerformanceMeasure.java	10	Avoid using implementation types like 'ArrayList'; use the interface instead
3646	src/pipe/common/PerformanceMeasure.java	10	Avoid using implementation types like 'ArrayList'; use the interface instead
3647	src/pipe/common/PerformanceMeasure.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
3648	src/pipe/common/PerformanceMeasure.java	11	Avoid using implementation types like 'ArrayList'; use the interface instead
3649	src/pipe/common/PerformanceMeasure.java	11	Avoid using implementation types like 'ArrayList'; use the interface instead
3650	src/pipe/common/PerformanceMeasure.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
3651	src/pipe/common/PerformanceMeasure.java	19	Avoid variables with short names like id
3652	src/pipe/common/PerformanceMeasure.java	19	Parameter 'id' is not assigned and could be declared final
3653	src/pipe/common/PerformanceMeasure.java	24	Avoid variables with short names like id
3654	src/pipe/common/PerformanceMeasure.java	24	Parameter 'id' is not assigned and could be declared final
3655	src/pipe/common/PerformanceMeasure.java	29	Parameter 'newEstimator' is not assigned and could be declared final
3656	src/pipe/common/QueryConstants.java	17	An Interface should be used only to model a behaviour; consider converting this to a class.
3657	src/pipe/common/QueryConstants.java	41	Avoid excessively long variable names like PASSAGETIMEDENSITY_NODE
3658	src/pipe/common/QueryConstants.java	44	Avoid excessively long variable names like PROBININTERVAL_NODE
3659	src/pipe/common/QueryConstants.java	48	Avoid excessively long variable names like STEADYSTATEPROB_NODE
3660	src/pipe/common/QueryConstants.java	49	Avoid excessively long variable names like STEADYSTATESTATES_NODE
3661	src/pipe/common/QueryConstants.java	63	Avoid excessively long variable names like STATEFUNCTION_NODE
3662	src/pipe/common/QueryConstants.java	87	Variables that are final and static should be in all caps.
3663	src/pipe/common/QueryConstants.java	89	Variables that are final and static should be in all caps.
3664	src/pipe/common/QueryConstants.java	92	Variables that are final and static should be in all caps.
3665	src/pipe/common/QueryConstants.java	93	Variables that are final and static should be in all caps.
3666	src/pipe/common/QueryConstants.java	94	Variables that are final and static should be in all caps.
3667	src/pipe/common/QueryConstants.java	143	Avoid modifiers which are implied by the context
3668	src/pipe/common/QueryConstants.java	144	Avoid modifiers which are implied by the context
3669	src/pipe/common/QueryConstants.java	145	Avoid modifiers which are implied by the context
3670	src/pipe/common/QueryConstants.java	146	Avoid modifiers which are implied by the context
3671	src/pipe/common/QueryConstants.java	147	Avoid modifiers which are implied by the context
3672	src/pipe/common/ServerConstants.java	10	An Interface should be used only to model a behaviour; consider converting this to a class.
3673	src/pipe/common/ServerConstants.java	12	Avoid excessively long variable names like cdfResultsFileName
3674	src/pipe/common/ServerConstants.java	12	Avoid modifiers which are implied by the context
3675	src/pipe/common/ServerConstants.java	12	Variables that are final and static should be in all caps.
3676	src/pipe/common/ServerConstants.java	13	Avoid excessively long variable names like pdfResultsFileName
3677	src/pipe/common/ServerConstants.java	13	Avoid modifiers which are implied by the context
3678	src/pipe/common/ServerConstants.java	13	Variables that are final and static should be in all caps.
3679	src/pipe/common/ServerConstants.java	14	Avoid excessively long variable names like convolutionResultsFileName
3680	src/pipe/common/ServerConstants.java	14	Avoid modifiers which are implied by the context
3681	src/pipe/common/ServerConstants.java	14	Variables that are final and static should be in all caps.
3682	src/pipe/common/ServerConstants.java	15	Avoid excessively long variable names like percentileResultsFileName
3683	src/pipe/common/ServerConstants.java	15	Avoid modifiers which are implied by the context
3684	src/pipe/common/ServerConstants.java	15	Variables that are final and static should be in all caps.
3685	src/pipe/common/ServerConstants.java	16	Avoid excessively long variable names like probInIntervalResultsFileName
3686	src/pipe/common/ServerConstants.java	16	Avoid modifiers which are implied by the context
3687	src/pipe/common/ServerConstants.java	16	Variables that are final and static should be in all caps.
3688	src/pipe/common/ServerConstants.java	17	The String literal "results.dat" appears 4 times in this file; the first occurrence is on line 17
3689	src/pipe/common/SimpleArc.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
3690	src/pipe/common/SimpleArc.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
3691	src/pipe/common/SimpleArc.java	17	Parameter 'placeId' is not assigned and could be declared final
3692	src/pipe/common/SimpleArc.java	17	Parameter 'weight' is not assigned and could be declared final
3693	src/pipe/common/SimpleOperationNode.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
3694	src/pipe/common/SimpleOperationNode.java	24	Avoid using implementation types like 'HashMap'; use the interface instead
3695	src/pipe/common/SimpleOperationNode.java	24	Avoid using implementation types like 'HashMap'; use the interface instead
3696	src/pipe/common/SimpleOperationNode.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
3697	src/pipe/common/SimpleOperationNode.java	31	Avoid using implementation types like 'HashMap'; use the interface instead
3698	src/pipe/common/SimpleOperationNode.java	31	Avoid using implementation types like 'HashMap'; use the interface instead
3699	src/pipe/common/SimpleOperationNode.java	31	Avoid variables with short names like id
3700	src/pipe/common/SimpleOperationNode.java	31	Parameter 'children' is not assigned and could be declared final
3701	src/pipe/common/SimpleOperationNode.java	31	Parameter 'id' is not assigned and could be declared final
3702	src/pipe/common/SimpleOperationNode.java	31	Parameter 'parent' is not assigned and could be declared final
3703	src/pipe/common/SimpleOperationNode.java	31	Parameter 'type' is not assigned and could be declared final
3704	src/pipe/common/SimpleOperationNode.java	36	Avoid variables with short names like id
3705	src/pipe/common/SimpleOperationNode.java	36	Parameter 'id' is not assigned and could be declared final
3706	src/pipe/common/SimpleOperationNode.java	39	Avoid using implementation types like 'HashMap'; use the interface instead
3707	src/pipe/common/SimpleOperationNode.java	39	Avoid using implementation types like 'HashMap'; use the interface instead
3708	src/pipe/common/SimpleOperationNode.java	45	Avoid using implementation types like 'HashMap'; use the interface instead
3709	src/pipe/common/SimpleOperationNode.java	45	Avoid using implementation types like 'HashMap'; use the interface instead
3710	src/pipe/common/SimplePlaces.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
3711	src/pipe/common/SimplePlaces.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
3712	src/pipe/common/SimplePlaces.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
3713	src/pipe/common/SimplePlaces.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
3714	src/pipe/common/SimplePlaces.java	24	Avoid variables with short names like i
3715	src/pipe/common/SimpleTransitions.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
3716	src/pipe/common/SimpleTransitions.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
3717	src/pipe/common/SimpleTransitions.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
3718	src/pipe/common/SimpleTransitions.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
3719	src/pipe/common/SimpleTransitions.java	27	Avoid using implementation types like 'ArrayList'; use the interface instead
3720	src/pipe/common/SimpleTransitions.java	27	Avoid using implementation types like 'ArrayList'; use the interface instead
3721	src/pipe/common/SimpleTransitions.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
3722	src/pipe/common/SimpleTransitions.java	31	Avoid variables with short names like i
3723	src/pipe/common/SimpleTransitions.java	55	Avoid instantiating new objects inside loops
3724	src/pipe/common/SimpleTransitions.java	56	Avoid instantiating new objects inside loops
3725	src/pipe/common/SimpleTransitions.java	65	Avoid instantiating new objects inside loops
3726	src/pipe/common/SimpleTransitions.java	74	Avoid instantiating new objects inside loops
3727	src/pipe/common/SoftExceptionHandler.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
3728	src/pipe/common/SoftExceptionHandler.java	16	The Logger variable declaration does not contain the static and final modifiers
3729	src/pipe/common/SoftExceptionHandler.java	22	To be compliant to J2EE, a webapp should not use any thread.
3730	src/pipe/common/StringHelper.java	17	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
3731	src/pipe/common/StringHelper.java	23	Avoid reassigning parameters such as 'scanTo'
3732	src/pipe/common/StringHelper.java	23	Avoid variables with short names like s
3733	src/pipe/common/StringHelper.java	27	Avoid variables with short names like p1
3734	src/pipe/common/StringHelper.java	28	Avoid variables with short names like m
3735	src/pipe/common/StringHelper.java	29	Found 'DD'-anomaly for variable 'result' (lines '29'-'32').
3736	src/pipe/common/StringHelper.java	32	Found 'DD'-anomaly for variable 'result' (lines '32'-'32').
3737	src/pipe/common/StringHelper.java	40	Avoid variables with short names like p
3738	src/pipe/common/StringHelper.java	40	Found 'DU'-anomaly for variable 'p' (lines '40'-'64').
3739	src/pipe/common/StringHelper.java	41	Found 'DD'-anomaly for variable 'result' (lines '41'-'54').
3740	src/pipe/common/StringHelper.java	42	Found 'DD'-anomaly for variable 'line' (lines '42'-'47').
3741	src/pipe/common/StringHelper.java	42	Found 'DU'-anomaly for variable 'line' (lines '42'-'64').
3742	src/pipe/common/StringHelper.java	43	Avoid calling toString() on String objects; this is unnecessary.
3743	src/pipe/common/StringHelper.java	43	Avoid variables with short names like s1
3744	src/pipe/common/StringHelper.java	50	Avoid instantiating new objects inside loops
3745	src/pipe/common/StringHelper.java	54	Found 'DD'-anomaly for variable 'result' (lines '54'-'54').
3746	src/pipe/common/StringHelper.java	79	Prefer StringBuffer over += for concatenating strings
3747	src/pipe/common/StringHelper.java	83	Prefer StringBuffer over += for concatenating strings
3748	src/pipe/common/StringHelper.java	87	Prefer StringBuffer over += for concatenating strings
3749	src/pipe/common/StringHelper.java	91	Prefer StringBuffer over += for concatenating strings
3750	src/pipe/common/StringHelper.java	109	Avoid using implementation types like 'HashMap'; use the interface instead
3751	src/pipe/common/StringHelper.java	109	Avoid using implementation types like 'HashMap'; use the interface instead
3752	src/pipe/common/StringHelper.java	131	Avoid using implementation types like 'HashMap'; use the interface instead
3753	src/pipe/common/StringHelper.java	131	Avoid using implementation types like 'HashMap'; use the interface instead
3754	src/pipe/common/StringHelper.java	134	Avoid using final local variables, turn them into fields
3755	src/pipe/common/StringHelper.java	139	Found 'DU'-anomaly for variable 'labels' (lines '139'-'167').
3756	src/pipe/common/StringHelper.java	182	Avoid using implementation types like 'HashMap'; use the interface instead
3757	src/pipe/common/StringHelper.java	182	Avoid using implementation types like 'HashMap'; use the interface instead
3758	src/pipe/common/dataLayer/AnnotationNote.java	8	Package name contains upper case characters
3759	src/pipe/common/dataLayer/AnnotationNote.java	41	This class has too many methods, consider refactoring it.
3760	src/pipe/common/dataLayer/AnnotationNote.java	46	Found non-transient, non-static member. Please mark as transient or provide accessors.
3761	src/pipe/common/dataLayer/AnnotationNote.java	52	Avoid variables with short names like e
3762	src/pipe/common/dataLayer/AnnotationNote.java	57	Avoid variables with short names like e
3763	src/pipe/common/dataLayer/AnnotationNote.java	62	Avoid variables with short names like e
3764	src/pipe/common/dataLayer/AnnotationNote.java	79	Found non-transient, non-static member. Please mark as transient or provide accessors.
3765	src/pipe/common/dataLayer/AnnotationNote.java	83	Found non-transient, non-static member. Please mark as transient or provide accessors.
3766	src/pipe/common/dataLayer/AnnotationNote.java	83	Use explicit scoping instead of the default package private level
3767	src/pipe/common/dataLayer/AnnotationNote.java	84	Found non-transient, non-static member. Please mark as transient or provide accessors.
3768	src/pipe/common/dataLayer/AnnotationNote.java	84	Use explicit scoping instead of the default package private level
3769	src/pipe/common/dataLayer/AnnotationNote.java	85	Found non-transient, non-static member. Please mark as transient or provide accessors.
3770	src/pipe/common/dataLayer/AnnotationNote.java	87	It is a good practice to call super() in a constructor
3771	src/pipe/common/dataLayer/AnnotationNote.java	97	Avoid variables with short names like x
3772	src/pipe/common/dataLayer/AnnotationNote.java	97	Avoid variables with short names like y
3773	src/pipe/common/dataLayer/AnnotationNote.java	153	It is a good practice to call super() in a constructor
3774	src/pipe/common/dataLayer/AnnotationNote.java	198	It is a good practice to call super() in a constructor
3775	src/pipe/common/dataLayer/AnnotationNote.java	240	Avoid instantiating new objects inside loops
3776	src/pipe/common/dataLayer/AnnotationNote.java	262	Overridable method 'updateBounds' called during object construction
3777	src/pipe/common/dataLayer/AnnotationNote.java	270	Overridable method 'updateBounds' called during object construction
3778	src/pipe/common/dataLayer/AnnotationNote.java	311	Use bitwise inversion to invert boolean values
3779	src/pipe/common/dataLayer/Arc.java	1	Package name contains upper case characters
3780	src/pipe/common/dataLayer/Arc.java	40	This class has too many methods, consider refactoring it.
3781	src/pipe/common/dataLayer/Arc.java	46	Variables that are final and static should be in all caps.
3782	src/pipe/common/dataLayer/Arc.java	68	Found non-transient, non-static member. Please mark as transient or provide accessors.
3783	src/pipe/common/dataLayer/Arc.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
3784	src/pipe/common/dataLayer/Arc.java	77	Found non-transient, non-static member. Please mark as transient or provide accessors.
3785	src/pipe/common/dataLayer/Arc.java	82	Found non-transient, non-static member. Please mark as transient or provide accessors.
3786	src/pipe/common/dataLayer/Arc.java	98	Avoid excessively long variable names like startPositionXInput
3787	src/pipe/common/dataLayer/Arc.java	98	It is a good practice to call super() in a constructor
3788	src/pipe/common/dataLayer/Arc.java	99	Avoid excessively long variable names like startPositionYInput
3789	src/pipe/common/dataLayer/Arc.java	109	Overridable method 'updateBounds' called during object construction
3790	src/pipe/common/dataLayer/Arc.java	135	Avoid excessively long variable names like startPositionXInput
3791	src/pipe/common/dataLayer/Arc.java	135	Avoid really long parameter lists.
3792	src/pipe/common/dataLayer/Arc.java	136	Avoid excessively long variable names like startPositionYInput
3793	src/pipe/common/dataLayer/Arc.java	155	Overridable method 'setWeight' called during object construction
3794	src/pipe/common/dataLayer/Arc.java	156	Overridable method 'setTagged' called during object construction
3795	src/pipe/common/dataLayer/Arc.java	181	Avoid excessively long variable names like startPositionXInput
3796	src/pipe/common/dataLayer/Arc.java	181	Avoid unused constructor parameters such as 'colorInput'.
3797	src/pipe/common/dataLayer/Arc.java	194	Overridable method 'setSource' called during object construction
3798	src/pipe/common/dataLayer/Arc.java	195	Overridable method 'setTarget' called during object construction
3799	src/pipe/common/dataLayer/Arc.java	235	It is a good practice to call super() in a constructor
3800	src/pipe/common/dataLayer/Arc.java	280	Overriding method merely calls super
3801	src/pipe/common/dataLayer/Arc.java	280	clone() method should throw CloneNotSupportedException
3802	src/pipe/common/dataLayer/Arc.java	286	Avoid variables with short names like x
3803	src/pipe/common/dataLayer/Arc.java	286	Avoid variables with short names like y
3804	src/pipe/common/dataLayer/Arc.java	387	Avoid if (x != y) ..; else ..;
3805	src/pipe/common/dataLayer/Arc.java	389	A method should have only one exit point, and that should be the last statement in the method
3806	src/pipe/common/dataLayer/Arc.java	393	Avoid if (x != y) ..; else ..;
3807	src/pipe/common/dataLayer/Arc.java	395	A method should have only one exit point, and that should be the last statement in the method
3808	src/pipe/common/dataLayer/Arc.java	474	A method should have only one exit point, and that should be the last statement in the method
3809	src/pipe/common/dataLayer/Arc.java	499	A method should have only one exit point, and that should be the last statement in the method
3810	src/pipe/common/dataLayer/Arc.java	568	Avoid variables with short names like g
3811	src/pipe/common/dataLayer/Arc.java	571	Avoid variables with short names like g2
3812	src/pipe/common/dataLayer/Arc.java	601	Avoid variables with short names like x
3813	src/pipe/common/dataLayer/Arc.java	652	Found 'DU'-anomaly for variable 'wasTagged' (lines '652'-'678').
3814	src/pipe/common/dataLayer/Arc.java	659	Avoid using if statements without curly braces
3815	src/pipe/common/dataLayer/Arc.java	668	Avoid using if statements without curly braces
3816	src/pipe/common/dataLayer/Arc.java	744	Avoid using if statements without curly braces
3817	src/pipe/common/dataLayer/Arc.java	745	Avoid using if statements without curly braces
3818	src/pipe/common/dataLayer/ArcPath.java	11	Package name contains upper case characters
3819	src/pipe/common/dataLayer/ArcPath.java	11	This class has a bunch of public methods and attributes
3820	src/pipe/common/dataLayer/ArcPath.java	38	This class has too many methods, consider refactoring it.
3821	src/pipe/common/dataLayer/ArcPath.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
3822	src/pipe/common/dataLayer/ArcPath.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
3823	src/pipe/common/dataLayer/ArcPath.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
3824	src/pipe/common/dataLayer/ArcPath.java	51	Found non-transient, non-static member. Please mark as transient or provide accessors.
3825	src/pipe/common/dataLayer/ArcPath.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
3826	src/pipe/common/dataLayer/ArcPath.java	53	Use explicit scoping instead of the default package private level
3827	src/pipe/common/dataLayer/ArcPath.java	57	This final field could be made static
3828	src/pipe/common/dataLayer/ArcPath.java	59	Avoid variables with short names like a
3829	src/pipe/common/dataLayer/ArcPath.java	59	Parameter 'a' is not assigned and could be declared final
3830	src/pipe/common/dataLayer/ArcPath.java	69	Avoid variables with short names like x
3831	src/pipe/common/dataLayer/ArcPath.java	69	Avoid variables with short names like y
3832	src/pipe/common/dataLayer/ArcPath.java	69	Parameter 'type' is not assigned and could be declared final
3833	src/pipe/common/dataLayer/ArcPath.java	69	Parameter 'x' is not assigned and could be declared final
3834	src/pipe/common/dataLayer/ArcPath.java	69	Parameter 'y' is not assigned and could be declared final
3835	src/pipe/common/dataLayer/ArcPath.java	74	Avoid variables with short names like x
3836	src/pipe/common/dataLayer/ArcPath.java	74	Avoid variables with short names like y
3837	src/pipe/common/dataLayer/ArcPath.java	74	Parameter 'type' is not assigned and could be declared final
3838	src/pipe/common/dataLayer/ArcPath.java	100	Avoid instantiating new objects inside loops
3839	src/pipe/common/dataLayer/ArcPath.java	129	Avoid instantiating new objects inside loops
3840	src/pipe/common/dataLayer/ArcPath.java	139	Found 'DD'-anomaly for variable 'gamma' (lines '139'-'152').
3841	src/pipe/common/dataLayer/ArcPath.java	140	Found 'DD'-anomaly for variable 'delta' (lines '140'-'159').
3842	src/pipe/common/dataLayer/ArcPath.java	141	Found 'DD'-anomaly for variable 'D' (lines '141'-'166').
3843	src/pipe/common/dataLayer/ArcPath.java	152	Found 'DD'-anomaly for variable 'gamma' (lines '152'-'155').
3844	src/pipe/common/dataLayer/ArcPath.java	152	Found 'DD'-anomaly for variable 'gamma' (lines '152'-'157').
3845	src/pipe/common/dataLayer/ArcPath.java	159	Found 'DD'-anomaly for variable 'delta' (lines '159'-'162').
3846	src/pipe/common/dataLayer/ArcPath.java	159	Found 'DD'-anomaly for variable 'delta' (lines '159'-'164').
3847	src/pipe/common/dataLayer/ArcPath.java	166	Found 'DD'-anomaly for variable 'D' (lines '166'-'169').
3848	src/pipe/common/dataLayer/ArcPath.java	166	Found 'DU'-anomaly for variable 'D' (lines '166'-'180').
3849	src/pipe/common/dataLayer/ArcPath.java	173	Found 'DD'-anomaly for variable 'C' (lines '173'-'176').
3850	src/pipe/common/dataLayer/ArcPath.java	176	Avoid instantiating new objects inside loops
3851	src/pipe/common/dataLayer/ArcPath.java	176	Found 'DD'-anomaly for variable 'C' (lines '176'-'176').
3852	src/pipe/common/dataLayer/ArcPath.java	227	Assigning an Object to null is a code smell. Consider refactoring.
3853	src/pipe/common/dataLayer/ArcPath.java	297	Found 'DD'-anomaly for variable 'details' (lines '297'-'302').
3854	src/pipe/common/dataLayer/ArcPath.java	302	Found 'DD'-anomaly for variable 'details' (lines '302'-'303').
3855	src/pipe/common/dataLayer/ArcPath.java	303	Found 'DD'-anomaly for variable 'details' (lines '303'-'304').
3856	src/pipe/common/dataLayer/ArcPath.java	304	Found 'DD'-anomaly for variable 'details' (lines '304'-'302').
3857	src/pipe/common/dataLayer/ArcPath.java	341	Found 'DD'-anomaly for variable 'p' (lines '341'-'352').
3858	src/pipe/common/dataLayer/ArcPath.java	344	Found 'DU'-anomaly for variable 'modCD' (lines '344'-'360').
3859	src/pipe/common/dataLayer/ArcPath.java	346	Found 'DU'-anomaly for variable 'ABx' (lines '346'-'360').
3860	src/pipe/common/dataLayer/ArcPath.java	347	Found 'DU'-anomaly for variable 'ABy' (lines '347'-'360').
3861	src/pipe/common/dataLayer/ArcPath.java	369	A method should have only one exit point, and that should be the last statement in the method
3862	src/pipe/common/dataLayer/ArcPath.java	373	A method should have only one exit point, and that should be the last statement in the method
3863	src/pipe/common/dataLayer/ArcPath.java	442	A method should have only one exit point, and that should be the last statement in the method
3864	src/pipe/common/dataLayer/ArcPath.java	584	Found 'DD'-anomaly for variable 'curveStartIndex' (lines '584'-'584').
3865	src/pipe/common/dataLayer/ArcPath.java	584	Found 'DD'-anomaly for variable 'curveStartIndex' (lines '584'-'590').
3866	src/pipe/common/dataLayer/ArcPath.java	584	Found 'DU'-anomaly for variable 'curveStartIndex' (lines '584'-'631').
3867	src/pipe/common/dataLayer/ArcPath.java	585	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '585'-'585').
3868	src/pipe/common/dataLayer/ArcPath.java	585	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '585'-'595').
3869	src/pipe/common/dataLayer/ArcPath.java	585	Found 'DU'-anomaly for variable 'curveEndIndex' (lines '585'-'631').
3870	src/pipe/common/dataLayer/ArcPath.java	588	Avoid unnecessary comparisons in boolean expressions
3871	src/pipe/common/dataLayer/ArcPath.java	592	Avoid modifying an outer loop incrementer in an inner loop for update expression
3872	src/pipe/common/dataLayer/ArcPath.java	592	Avoid unnecessary comparisons in boolean expressions
3873	src/pipe/common/dataLayer/ArcPath.java	595	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '595'-'595').
3874	src/pipe/common/dataLayer/ArcPath.java	600	Avoid instantiating new objects inside loops
3875	src/pipe/common/dataLayer/ArcPath.java	600	Found 'DD'-anomaly for variable 'x' (lines '600'-'607').
3876	src/pipe/common/dataLayer/ArcPath.java	600	Found 'DD'-anomaly for variable 'x' (lines '600'-'610').
3877	src/pipe/common/dataLayer/ArcPath.java	601	Avoid instantiating new objects inside loops
3878	src/pipe/common/dataLayer/ArcPath.java	601	Found 'DD'-anomaly for variable 'y' (lines '601'-'608').
3879	src/pipe/common/dataLayer/ArcPath.java	601	Found 'DD'-anomaly for variable 'y' (lines '601'-'611').
3880	src/pipe/common/dataLayer/ArcPath.java	602	Found 'DD'-anomaly for variable 'X' (lines '602'-'613').
3881	src/pipe/common/dataLayer/ArcPath.java	603	Found 'DD'-anomaly for variable 'Y' (lines '603'-'614').
3882	src/pipe/common/dataLayer/ArcPath.java	607	Found 'DD'-anomaly for variable 'x' (lines '607'-'607').
3883	src/pipe/common/dataLayer/ArcPath.java	607	Found 'DD'-anomaly for variable 'x' (lines '607'-'610').
3884	src/pipe/common/dataLayer/ArcPath.java	608	Found 'DD'-anomaly for variable 'y' (lines '608'-'608').
3885	src/pipe/common/dataLayer/ArcPath.java	608	Found 'DD'-anomaly for variable 'y' (lines '608'-'611').
3886	src/pipe/common/dataLayer/ArcPath.java	613	Found 'DD'-anomaly for variable 'X' (lines '613'-'602').
3887	src/pipe/common/dataLayer/ArcPath.java	613	Found 'DU'-anomaly for variable 'X' (lines '613'-'631').
3888	src/pipe/common/dataLayer/ArcPath.java	614	Found 'DD'-anomaly for variable 'Y' (lines '614'-'603').
3889	src/pipe/common/dataLayer/ArcPath.java	614	Found 'DU'-anomaly for variable 'Y' (lines '614'-'631').
3890	src/pipe/common/dataLayer/ArcPath.java	637	Found 'DU'-anomaly for variable 'source' (lines '637'-'680').
3891	src/pipe/common/dataLayer/ArcPath.java	638	Found 'DU'-anomaly for variable 'target' (lines '638'-'680').
3892	src/pipe/common/dataLayer/ArcPath.java	639	Found 'DU'-anomaly for variable 'anAngle' (lines '639'-'680').
3893	src/pipe/common/dataLayer/ArcPath.java	641	Avoid if (x != y) ..; else ..;
3894	src/pipe/common/dataLayer/ArcPath.java	645	No need to check for null before an instanceof
3895	src/pipe/common/dataLayer/ArcPath.java	646	Avoid unnecessary comparisons in boolean expressions
3896	src/pipe/common/dataLayer/ArcPath.java	663	Avoid unnecessary comparisons in boolean expressions
3897	src/pipe/common/dataLayer/ArcPath.java	721	Found 'DD'-anomaly for variable 'myCurrentPoint' (lines '721'-'729').
3898	src/pipe/common/dataLayer/ArcPath.java	721	Found 'DU'-anomaly for variable 'myCurrentPoint' (lines '721'-'767').
3899	src/pipe/common/dataLayer/ArcPath.java	722	Avoid excessively long variable names like myPreviousButOnePoint
3900	src/pipe/common/dataLayer/ArcPath.java	722	Found 'DD'-anomaly for variable 'myPreviousButOnePoint' (lines '722'-'748').
3901	src/pipe/common/dataLayer/ArcPath.java	722	Found 'DU'-anomaly for variable 'myPreviousButOnePoint' (lines '722'-'767').
3902	src/pipe/common/dataLayer/ArcPath.java	723	Found 'DD'-anomaly for variable 'myNextPoint' (lines '723'-'756').
3903	src/pipe/common/dataLayer/ArcPath.java	723	Found 'DU'-anomaly for variable 'myNextPoint' (lines '723'-'767').
3904	src/pipe/common/dataLayer/ArcPath.java	724	Found 'DD'-anomaly for variable 'myPreviousPoint' (lines '724'-'728').
3905	src/pipe/common/dataLayer/ArcPath.java	724	Found 'DU'-anomaly for variable 'myPreviousPoint' (lines '724'-'767').
3906	src/pipe/common/dataLayer/ArcPath.java	731	Avoid unnecessary comparisons in boolean expressions
3907	src/pipe/common/dataLayer/ArcPath.java	798	Found 'DD'-anomaly for variable 'distances' (lines '798'-'806').
3908	src/pipe/common/dataLayer/ArcPath.java	806	Found 'DD'-anomaly for variable 'distances' (lines '806'-'806').
3909	src/pipe/common/dataLayer/ArcPath.java	810	Found 'DU'-anomaly for variable 'shortest' (lines '810'-'830').
3910	src/pipe/common/dataLayer/ArcPath.java	811	Found 'DD'-anomaly for variable 'wantedpoint' (lines '811'-'817').
3911	src/pipe/common/dataLayer/ArcPath.java	816	Found 'DU'-anomaly for variable 'shortest' (lines '816'-'830').
3912	src/pipe/common/dataLayer/ArcPath.java	817	Found 'DD'-anomaly for variable 'wantedpoint' (lines '817'-'817').
3913	src/pipe/common/dataLayer/ArcPath.java	852	Use explicit scoping instead of the default package private level
3914	src/pipe/common/dataLayer/ArcPathPoint.java	9	Package name contains upper case characters
3915	src/pipe/common/dataLayer/ArcPathPoint.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
3916	src/pipe/common/dataLayer/ArcPathPoint.java	45	This final field could be made static
3917	src/pipe/common/dataLayer/ArcPathPoint.java	46	Found non-transient, non-static member. Please mark as transient or provide accessors.
3918	src/pipe/common/dataLayer/ArcPathPoint.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
3919	src/pipe/common/dataLayer/ArcPathPoint.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
3920	src/pipe/common/dataLayer/ArcPathPoint.java	55	Avoid variables with short names like a
3921	src/pipe/common/dataLayer/ArcPathPoint.java	55	It is a good practice to call super() in a constructor
3922	src/pipe/common/dataLayer/ArcPathPoint.java	62	Overridable method 'setPointLocation' called during object construction
3923	src/pipe/common/dataLayer/ArcPathPoint.java	66	Avoid variables with short names like a
3924	src/pipe/common/dataLayer/ArcPathPoint.java	66	Avoid variables with short names like x
3925	src/pipe/common/dataLayer/ArcPathPoint.java	66	Avoid variables with short names like y
3926	src/pipe/common/dataLayer/ArcPathPoint.java	68	Overridable method 'setPointLocation' called during object construction
3927	src/pipe/common/dataLayer/ArcPathPoint.java	75	Avoid variables with short names like a
3928	src/pipe/common/dataLayer/ArcPathPoint.java	95	Found 'DD'-anomaly for variable 'angle' (lines '95'-'105').
3929	src/pipe/common/dataLayer/ArcPathPoint.java	99	Found 'DD'-anomaly for variable 'angle' (lines '99'-'105').
3930	src/pipe/common/dataLayer/ArcPathPoint.java	116	Found 'DD'-anomaly for variable 'angle' (lines '116'-'126').
3931	src/pipe/common/dataLayer/ArcPathPoint.java	120	Found 'DD'-anomaly for variable 'angle' (lines '120'-'126').
3932	src/pipe/common/dataLayer/ArcPathPoint.java	153	A method should have only one exit point, and that should be the last statement in the method
3933	src/pipe/common/dataLayer/ArcPathPoint.java	169	A getX() method which returns a boolean should be named isX()
3934	src/pipe/common/dataLayer/ArcPathPoint.java	307	Use bitwise inversion to invert boolean values
3935	src/pipe/common/dataLayer/ComplexWritable.java	1	Package name contains upper case characters
3936	src/pipe/common/dataLayer/ComplexWritable.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
3937	src/pipe/common/dataLayer/ComplexWritable.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
3938	src/pipe/common/dataLayer/ComplexWritable.java	23	Document empty constructor
3939	src/pipe/common/dataLayer/ComplexWritable.java	33	Overridable method 'set' called during object construction
3940	src/pipe/common/dataLayer/ComplexWritable.java	37	Avoid variables with short names like o
3941	src/pipe/common/dataLayer/ComplexWritable.java	55	Avoid variables with short names like o
3942	src/pipe/common/dataLayer/ComplexWritable.java	59	A method should have only one exit point, and that should be the last statement in the method
3943	src/pipe/common/dataLayer/ComplexWritable.java	87	Avoid variables with short names like in
3944	src/pipe/common/dataLayer/DataLayer.java	1	Package name contains upper case characters
3945	src/pipe/common/dataLayer/DataLayer.java	1	This class has a bunch of public methods and attributes
3946	src/pipe/common/dataLayer/DataLayer.java	87	Avoid really long classes.
3947	src/pipe/common/dataLayer/DataLayer.java	87	The class 'DataLayer' has a Cyclomatic Complexity of 6 (Highest = 31).
3948	src/pipe/common/dataLayer/DataLayer.java	87	Too many fields
3949	src/pipe/common/dataLayer/DataLayer.java	88	This class has too many methods, consider refactoring it.
3950	src/pipe/common/dataLayer/DataLayer.java	95	Possible unsafe assignment to a non-final static field in a constructor.
3951	src/pipe/common/dataLayer/DataLayer.java	98	Avoid excessively long variable names like initialMarkingVectorChanged
3952	src/pipe/common/dataLayer/DataLayer.java	98	Use explicit scoping instead of the default package private level
3953	src/pipe/common/dataLayer/DataLayer.java	99	Avoid excessively long variable names like currentMarkingVectorChanged
3954	src/pipe/common/dataLayer/DataLayer.java	99	Use explicit scoping instead of the default package private level
3955	src/pipe/common/dataLayer/DataLayer.java	107	Avoid using implementation types like 'ArrayList'; use the interface instead
3956	src/pipe/common/dataLayer/DataLayer.java	107	Avoid using implementation types like 'ArrayList'; use the interface instead
3957	src/pipe/common/dataLayer/DataLayer.java	107	Avoid using implementation types like 'ArrayList'; use the interface instead
3958	src/pipe/common/dataLayer/DataLayer.java	107	Avoid using implementation types like 'ArrayList'; use the interface instead
3959	src/pipe/common/dataLayer/DataLayer.java	120	Avoid using implementation types like 'ArrayList'; use the interface instead
3960	src/pipe/common/dataLayer/DataLayer.java	120	Avoid using implementation types like 'ArrayList'; use the interface instead
3961	src/pipe/common/dataLayer/DataLayer.java	120	Found non-transient, non-static member. Please mark as transient or provide accessors.
3962	src/pipe/common/dataLayer/DataLayer.java	122	Avoid using implementation types like 'ArrayList'; use the interface instead
3963	src/pipe/common/dataLayer/DataLayer.java	122	Avoid using implementation types like 'ArrayList'; use the interface instead
3964	src/pipe/common/dataLayer/DataLayer.java	122	Found non-transient, non-static member. Please mark as transient or provide accessors.
3965	src/pipe/common/dataLayer/DataLayer.java	125	Avoid using implementation types like 'ArrayList'; use the interface instead
3966	src/pipe/common/dataLayer/DataLayer.java	125	Avoid using implementation types like 'ArrayList'; use the interface instead
3967	src/pipe/common/dataLayer/DataLayer.java	125	Found non-transient, non-static member. Please mark as transient or provide accessors.
3968	src/pipe/common/dataLayer/DataLayer.java	128	Found non-transient, non-static member. Please mark as transient or provide accessors.
3969	src/pipe/common/dataLayer/DataLayer.java	131	Found non-transient, non-static member. Please mark as transient or provide accessors.
3970	src/pipe/common/dataLayer/DataLayer.java	144	Avoid excessively long variable names like initialMarkingVector
3971	src/pipe/common/dataLayer/DataLayer.java	146	Avoid excessively long variable names like currentMarkingVector
3972	src/pipe/common/dataLayer/DataLayer.java	148	Avoid excessively long variable names like markingVectorAnimationStorage
3973	src/pipe/common/dataLayer/DataLayer.java	155	Avoid unused private fields such as 'outOfBound'.
3974	src/pipe/common/dataLayer/DataLayer.java	155	Private field 'outOfBound' could be made final; it is only initialized in the declaration or constructor.
3975	src/pipe/common/dataLayer/DataLayer.java	169	This final field could be made static
3976	src/pipe/common/dataLayer/DataLayer.java	179	This final field could be made static
3977	src/pipe/common/dataLayer/DataLayer.java	189	This final field could be made static
3978	src/pipe/common/dataLayer/DataLayer.java	200	This final field could be made static
3979	src/pipe/common/dataLayer/DataLayer.java	214	Consider replacing this Hashtable with the newer java.util.Map
3980	src/pipe/common/dataLayer/DataLayer.java	225	It is a good practice to call super() in a constructor
3981	src/pipe/common/dataLayer/DataLayer.java	239	It is a good practice to call super() in a constructor
3982	src/pipe/common/dataLayer/DataLayer.java	244	Overridable method 'createFromPNML' called during object construction
3983	src/pipe/common/dataLayer/DataLayer.java	338	The method 'addArc' has a Cyclomatic Complexity of 13.
3984	src/pipe/common/dataLayer/DataLayer.java	340	Found 'DD'-anomaly for variable 'unique' (lines '340'-'349').
3985	src/pipe/common/dataLayer/DataLayer.java	340	Found 'DD'-anomaly for variable 'unique' (lines '340'-'368').
3986	src/pipe/common/dataLayer/DataLayer.java	340	Found 'DD'-anomaly for variable 'unique' (lines '340'-'373').
3987	src/pipe/common/dataLayer/DataLayer.java	340	Found 'DU'-anomaly for variable 'unique' (lines '340'-'401').
3988	src/pipe/common/dataLayer/DataLayer.java	349	Found 'DD'-anomaly for variable 'unique' (lines '349'-'349').
3989	src/pipe/common/dataLayer/DataLayer.java	349	Found 'DU'-anomaly for variable 'unique' (lines '349'-'401').
3990	src/pipe/common/dataLayer/DataLayer.java	355	Avoid variables with short names like id
3991	src/pipe/common/dataLayer/DataLayer.java	355	Found 'DD'-anomaly for variable 'id' (lines '355'-'363').
3992	src/pipe/common/dataLayer/DataLayer.java	358	Avoid variables with short names like no
3993	src/pipe/common/dataLayer/DataLayer.java	363	Found 'DD'-anomaly for variable 'id' (lines '363'-'363').
3994	src/pipe/common/dataLayer/DataLayer.java	368	Found 'DD'-anomaly for variable 'unique' (lines '368'-'368').
3995	src/pipe/common/dataLayer/DataLayer.java	368	Found 'DD'-anomaly for variable 'unique' (lines '368'-'373').
3996	src/pipe/common/dataLayer/DataLayer.java	369	Found 'DU'-anomaly for variable 'no' (lines '369'-'401').
3997	src/pipe/common/dataLayer/DataLayer.java	373	Found 'DD'-anomaly for variable 'unique' (lines '373'-'368').
3998	src/pipe/common/dataLayer/DataLayer.java	373	Found 'DD'-anomaly for variable 'unique' (lines '373'-'373').
3999	src/pipe/common/dataLayer/DataLayer.java	384	Avoid if (x != y) ..; else ..;
4000	src/pipe/common/dataLayer/DataLayer.java	415	Found 'DD'-anomaly for variable 'newList' (lines '415'-'429').
4001	src/pipe/common/dataLayer/DataLayer.java	415	Found 'DD'-anomaly for variable 'newList' (lines '415'-'447').
4002	src/pipe/common/dataLayer/DataLayer.java	415	Found 'DU'-anomaly for variable 'newList' (lines '415'-'453').
4003	src/pipe/common/dataLayer/DataLayer.java	421	Avoid if (x != y) ..; else ..;
4004	src/pipe/common/dataLayer/DataLayer.java	439	Avoid if (x != y) ..; else ..;
4005	src/pipe/common/dataLayer/DataLayer.java	497	Assigning an Object to null is a code smell. Consider refactoring.
4006	src/pipe/common/dataLayer/DataLayer.java	508	The method 'addPlace' has a Cyclomatic Complexity of 13.
4007	src/pipe/common/dataLayer/DataLayer.java	510	Found 'DD'-anomaly for variable 'unique' (lines '510'-'519').
4008	src/pipe/common/dataLayer/DataLayer.java	510	Found 'DD'-anomaly for variable 'unique' (lines '510'-'541').
4009	src/pipe/common/dataLayer/DataLayer.java	510	Found 'DD'-anomaly for variable 'unique' (lines '510'-'546').
4010	src/pipe/common/dataLayer/DataLayer.java	510	Found 'DU'-anomaly for variable 'unique' (lines '510'-'572').
4011	src/pipe/common/dataLayer/DataLayer.java	519	Found 'DD'-anomaly for variable 'unique' (lines '519'-'519').
4012	src/pipe/common/dataLayer/DataLayer.java	519	Found 'DU'-anomaly for variable 'unique' (lines '519'-'572').
4013	src/pipe/common/dataLayer/DataLayer.java	525	Avoid variables with short names like id
4014	src/pipe/common/dataLayer/DataLayer.java	525	Found 'DD'-anomaly for variable 'id' (lines '525'-'535').
4015	src/pipe/common/dataLayer/DataLayer.java	528	Avoid variables with short names like no
4016	src/pipe/common/dataLayer/DataLayer.java	535	Found 'DD'-anomaly for variable 'id' (lines '535'-'535').
4017	src/pipe/common/dataLayer/DataLayer.java	541	Found 'DD'-anomaly for variable 'unique' (lines '541'-'541').
4018	src/pipe/common/dataLayer/DataLayer.java	541	Found 'DD'-anomaly for variable 'unique' (lines '541'-'546').
4019	src/pipe/common/dataLayer/DataLayer.java	542	Found 'DU'-anomaly for variable 'no' (lines '542'-'572').
4020	src/pipe/common/dataLayer/DataLayer.java	546	Found 'DD'-anomaly for variable 'unique' (lines '546'-'541').
4021	src/pipe/common/dataLayer/DataLayer.java	546	Found 'DD'-anomaly for variable 'unique' (lines '546'-'546').
4022	src/pipe/common/dataLayer/DataLayer.java	557	Avoid if (x != y) ..; else ..;
4023	src/pipe/common/dataLayer/DataLayer.java	576	Found 'DD'-anomaly for variable 'unique' (lines '576'-'590').
4024	src/pipe/common/dataLayer/DataLayer.java	576	Found 'DD'-anomaly for variable 'unique' (lines '576'-'596').
4025	src/pipe/common/dataLayer/DataLayer.java	577	Avoid variables with short names like id
4026	src/pipe/common/dataLayer/DataLayer.java	577	Found 'DD'-anomaly for variable 'id' (lines '577'-'583').
4027	src/pipe/common/dataLayer/DataLayer.java	577	Found 'DD'-anomaly for variable 'id' (lines '577'-'602').
4028	src/pipe/common/dataLayer/DataLayer.java	577	Found 'DU'-anomaly for variable 'id' (lines '577'-'618').
4029	src/pipe/common/dataLayer/DataLayer.java	578	Found 'DU'-anomaly for variable 'no' (lines '578'-'618').
4030	src/pipe/common/dataLayer/DataLayer.java	583	Found 'DD'-anomaly for variable 'id' (lines '583'-'602').
4031	src/pipe/common/dataLayer/DataLayer.java	583	Found 'DU'-anomaly for variable 'id' (lines '583'-'618').
4032	src/pipe/common/dataLayer/DataLayer.java	590	Found 'DD'-anomaly for variable 'unique' (lines '590'-'590').
4033	src/pipe/common/dataLayer/DataLayer.java	609	Found 'DD'-anomaly for variable 'i' (lines '609'-'603').
4034	src/pipe/common/dataLayer/DataLayer.java	627	The method 'addTransition' has a Cyclomatic Complexity of 13.
4035	src/pipe/common/dataLayer/DataLayer.java	629	Found 'DD'-anomaly for variable 'unique' (lines '629'-'638').
4036	src/pipe/common/dataLayer/DataLayer.java	629	Found 'DD'-anomaly for variable 'unique' (lines '629'-'658').
4037	src/pipe/common/dataLayer/DataLayer.java	629	Found 'DD'-anomaly for variable 'unique' (lines '629'-'663').
4038	src/pipe/common/dataLayer/DataLayer.java	629	Found 'DU'-anomaly for variable 'unique' (lines '629'-'689').
4039	src/pipe/common/dataLayer/DataLayer.java	638	Found 'DD'-anomaly for variable 'unique' (lines '638'-'638').
4040	src/pipe/common/dataLayer/DataLayer.java	638	Found 'DU'-anomaly for variable 'unique' (lines '638'-'689').
4041	src/pipe/common/dataLayer/DataLayer.java	644	Found 'DD'-anomaly for variable 'id' (lines '644'-'653').
4042	src/pipe/common/dataLayer/DataLayer.java	653	Found 'DD'-anomaly for variable 'id' (lines '653'-'653').
4043	src/pipe/common/dataLayer/DataLayer.java	658	Found 'DD'-anomaly for variable 'unique' (lines '658'-'658').
4044	src/pipe/common/dataLayer/DataLayer.java	658	Found 'DD'-anomaly for variable 'unique' (lines '658'-'663').
4045	src/pipe/common/dataLayer/DataLayer.java	659	Found 'DU'-anomaly for variable 'no' (lines '659'-'689').
4046	src/pipe/common/dataLayer/DataLayer.java	663	Found 'DD'-anomaly for variable 'unique' (lines '663'-'658').
4047	src/pipe/common/dataLayer/DataLayer.java	663	Found 'DD'-anomaly for variable 'unique' (lines '663'-'663').
4048	src/pipe/common/dataLayer/DataLayer.java	674	Avoid if (x != y) ..; else ..;
4049	src/pipe/common/dataLayer/DataLayer.java	695	clone() method should throw CloneNotSupportedException
4050	src/pipe/common/dataLayer/DataLayer.java	697	Found 'DD'-anomaly for variable 'newClone' (lines '697'-'700').
4051	src/pipe/common/dataLayer/DataLayer.java	711	Avoid throwing raw exception types.
4052	src/pipe/common/dataLayer/DataLayer.java	740	The method 'createAnnotation' has a Cyclomatic Complexity of 15.
4053	src/pipe/common/dataLayer/DataLayer.java	740	The method createAnnotation() has an NPath complexity of 1827904
4054	src/pipe/common/dataLayer/DataLayer.java	742	Found 'DD'-anomaly for variable 'positionXInput' (lines '742'-'758').
4055	src/pipe/common/dataLayer/DataLayer.java	743	Found 'DD'-anomaly for variable 'positionYInput' (lines '743'-'764').
4056	src/pipe/common/dataLayer/DataLayer.java	744	Found 'DD'-anomaly for variable 'widthInput' (lines '744'-'770').
4057	src/pipe/common/dataLayer/DataLayer.java	745	Found 'DD'-anomaly for variable 'heightInput' (lines '745'-'775').
4058	src/pipe/common/dataLayer/DataLayer.java	746	Found 'DD'-anomaly for variable 'text' (lines '746'-'788').
4059	src/pipe/common/dataLayer/DataLayer.java	746	Found 'DD'-anomaly for variable 'text' (lines '746'-'792').
4060	src/pipe/common/dataLayer/DataLayer.java	747	Found 'DD'-anomaly for variable 'borderInput' (lines '747'-'780').
4061	src/pipe/common/dataLayer/DataLayer.java	747	Found 'DD'-anomaly for variable 'borderInput' (lines '747'-'784').
4062	src/pipe/common/dataLayer/DataLayer.java	758	Unnecessary wrapper object creation
4063	src/pipe/common/dataLayer/DataLayer.java	764	Unnecessary wrapper object creation
4064	src/pipe/common/dataLayer/DataLayer.java	770	Unnecessary wrapper object creation
4065	src/pipe/common/dataLayer/DataLayer.java	775	Unnecessary wrapper object creation
4066	src/pipe/common/dataLayer/DataLayer.java	780	Unnecessary wrapper object creation
4067	src/pipe/common/dataLayer/DataLayer.java	805	Avoid really long methods.
4068	src/pipe/common/dataLayer/DataLayer.java	805	The method createArc() has an NPath complexity of 1920
4069	src/pipe/common/dataLayer/DataLayer.java	807	Found 'DD'-anomaly for variable 'idInput' (lines '807'-'831').
4070	src/pipe/common/dataLayer/DataLayer.java	808	Found 'DD'-anomaly for variable 'sourceInput' (lines '808'-'815').
4071	src/pipe/common/dataLayer/DataLayer.java	809	Found 'DD'-anomaly for variable 'targetInput' (lines '809'-'816').
4072	src/pipe/common/dataLayer/DataLayer.java	810	Found 'DD'-anomaly for variable 'weightInput' (lines '810'-'843').
4073	src/pipe/common/dataLayer/DataLayer.java	811	Found 'DD'-anomaly for variable 'startX' (lines '811'-'859').
4074	src/pipe/common/dataLayer/DataLayer.java	811	Found 'DU'-anomaly for variable 'startX' (lines '811'-'952').
4075	src/pipe/common/dataLayer/DataLayer.java	812	Found 'DD'-anomaly for variable 'startY' (lines '812'-'860').
4076	src/pipe/common/dataLayer/DataLayer.java	812	Found 'DU'-anomaly for variable 'startY' (lines '812'-'952').
4077	src/pipe/common/dataLayer/DataLayer.java	815	Found 'DD'-anomaly for variable 'sourceInput' (lines '815'-'835').
4078	src/pipe/common/dataLayer/DataLayer.java	816	Found 'DD'-anomaly for variable 'targetInput' (lines '816'-'839').
4079	src/pipe/common/dataLayer/DataLayer.java	827	Use bitwise inversion to invert boolean values
4080	src/pipe/common/dataLayer/DataLayer.java	856	These nested if statements could be combined
4081	src/pipe/common/dataLayer/DataLayer.java	859	Found 'DU'-anomaly for variable 'startX' (lines '859'-'952').
4082	src/pipe/common/dataLayer/DataLayer.java	860	Found 'DU'-anomaly for variable 'startY' (lines '860'-'952').
4083	src/pipe/common/dataLayer/DataLayer.java	912	Found 'DD'-anomaly for variable 'arcPointX' (lines '912'-'935').
4084	src/pipe/common/dataLayer/DataLayer.java	912	Found 'DU'-anomaly for variable 'arcPointX' (lines '912'-'952').
4085	src/pipe/common/dataLayer/DataLayer.java	913	Found 'DD'-anomaly for variable 'arcPointY' (lines '913'-'936').
4086	src/pipe/common/dataLayer/DataLayer.java	913	Found 'DU'-anomaly for variable 'arcPointY' (lines '913'-'952').
4087	src/pipe/common/dataLayer/DataLayer.java	914	Found 'DD'-anomaly for variable 'arcPointType' (lines '914'-'939').
4088	src/pipe/common/dataLayer/DataLayer.java	914	Found 'DU'-anomaly for variable 'arcPointType' (lines '914'-'952').
4089	src/pipe/common/dataLayer/DataLayer.java	915	Found 'DD'-anomaly for variable 'arcTempX' (lines '915'-'932').
4090	src/pipe/common/dataLayer/DataLayer.java	915	Found 'DU'-anomaly for variable 'arcTempX' (lines '915'-'952').
4091	src/pipe/common/dataLayer/DataLayer.java	916	Found 'DD'-anomaly for variable 'arcTempY' (lines '916'-'933').
4092	src/pipe/common/dataLayer/DataLayer.java	916	Found 'DU'-anomaly for variable 'arcTempY' (lines '916'-'952').
4093	src/pipe/common/dataLayer/DataLayer.java	917	Found 'DD'-anomaly for variable 'arcTempType' (lines '917'-'934').
4094	src/pipe/common/dataLayer/DataLayer.java	917	Found 'DU'-anomaly for variable 'arcTempType' (lines '917'-'952').
4095	src/pipe/common/dataLayer/DataLayer.java	918	Found 'DD'-anomaly for variable 'node' (lines '918'-'926').
4096	src/pipe/common/dataLayer/DataLayer.java	918	Found 'DU'-anomaly for variable 'node' (lines '918'-'952').
4097	src/pipe/common/dataLayer/DataLayer.java	919	Found 'DD'-anomaly for variable 'nodelist' (lines '919'-'920').
4098	src/pipe/common/dataLayer/DataLayer.java	961	Found 'DD'-anomaly for variable 'placeNo' (lines '961'-'987').
4099	src/pipe/common/dataLayer/DataLayer.java	961	Found 'DD'-anomaly for variable 'transitionNo' (lines '961'-'986').
4100	src/pipe/common/dataLayer/DataLayer.java	961	Found 'DU'-anomaly for variable 'placeNo' (lines '961'-'996').
4101	src/pipe/common/dataLayer/DataLayer.java	961	Found 'DU'-anomaly for variable 'transitionNo' (lines '961'-'996').
4102	src/pipe/common/dataLayer/DataLayer.java	964	Found 'DD'-anomaly for variable 'arc' (lines '964'-'971').
4103	src/pipe/common/dataLayer/DataLayer.java	964	Found 'DU'-anomaly for variable 'arc' (lines '964'-'996').
4104	src/pipe/common/dataLayer/DataLayer.java	965	Found 'DD'-anomaly for variable 'place' (lines '965'-'979').
4105	src/pipe/common/dataLayer/DataLayer.java	965	Found 'DU'-anomaly for variable 'place' (lines '965'-'996').
4106	src/pipe/common/dataLayer/DataLayer.java	966	Found 'DD'-anomaly for variable 'transition' (lines '966'-'985').
4107	src/pipe/common/dataLayer/DataLayer.java	966	Found 'DU'-anomaly for variable 'transition' (lines '966'-'996').
4108	src/pipe/common/dataLayer/DataLayer.java	977	These nested if statements could be combined
4109	src/pipe/common/dataLayer/DataLayer.java	979	Found 'DD'-anomaly for variable 'place' (lines '979'-'979').
4110	src/pipe/common/dataLayer/DataLayer.java	979	Found 'DU'-anomaly for variable 'place' (lines '979'-'996').
4111	src/pipe/common/dataLayer/DataLayer.java	983	These nested if statements could be combined
4112	src/pipe/common/dataLayer/DataLayer.java	1042	These nested if statements could be combined
4113	src/pipe/common/dataLayer/DataLayer.java	1048	These nested if statements could be combined
4114	src/pipe/common/dataLayer/DataLayer.java	1173	Avoid throwing raw exception types.
4115	src/pipe/common/dataLayer/DataLayer.java	1229	The method createPlace() has an NPath complexity of 194688
4116	src/pipe/common/dataLayer/DataLayer.java	1253	Use bitwise inversion to invert boolean values
4117	src/pipe/common/dataLayer/DataLayer.java	1359	Avoid instantiating new objects inside loops
4118	src/pipe/common/dataLayer/DataLayer.java	1363	System.out.print is used
4119	src/pipe/common/dataLayer/DataLayer.java	1364	Position literals first in String comparisons
4120	src/pipe/common/dataLayer/DataLayer.java	1366	System.out.print is used
4121	src/pipe/common/dataLayer/DataLayer.java	1388	Avoid really long methods.
4122	src/pipe/common/dataLayer/DataLayer.java	1388	The method createTransition() has an NPath complexity of 584064
4123	src/pipe/common/dataLayer/DataLayer.java	1430	Use bitwise inversion to invert boolean values
4124	src/pipe/common/dataLayer/DataLayer.java	1476	Use equals() to compare strings instead of '==' or '!='
4125	src/pipe/common/dataLayer/DataLayer.java	1511	Assigning an Object to null is a code smell. Consider refactoring.
4126	src/pipe/common/dataLayer/DataLayer.java	1512	Assigning an Object to null is a code smell. Consider refactoring.
4127	src/pipe/common/dataLayer/DataLayer.java	1513	Assigning an Object to null is a code smell. Consider refactoring.
4128	src/pipe/common/dataLayer/DataLayer.java	1514	Assigning an Object to null is a code smell. Consider refactoring.
4129	src/pipe/common/dataLayer/DataLayer.java	1553	Avoid really long methods.
4130	src/pipe/common/dataLayer/DataLayer.java	1553	The method fireRandomTransition() has an NPath complexity of 1200
4131	src/pipe/common/dataLayer/DataLayer.java	1634	System.out.print is used
4132	src/pipe/common/dataLayer/DataLayer.java	1637	System.out.print is used
4133	src/pipe/common/dataLayer/DataLayer.java	1640	System.out.print is used
4134	src/pipe/common/dataLayer/DataLayer.java	1652	Avoid empty if statements
4135	src/pipe/common/dataLayer/DataLayer.java	1697	Avoid using if statements without curly braces
4136	src/pipe/common/dataLayer/DataLayer.java	1710	Local variable 'currentPlace' could be declared final
4137	src/pipe/common/dataLayer/DataLayer.java	1714	Avoid using if statements without curly braces
4138	src/pipe/common/dataLayer/DataLayer.java	1734	Avoid using if...else statements without curly braces
4139	src/pipe/common/dataLayer/DataLayer.java	1735	Avoid using if...else statements without curly braces
4140	src/pipe/common/dataLayer/DataLayer.java	1749	Avoid using if statements without curly braces
4141	src/pipe/common/dataLayer/DataLayer.java	1760	Avoid using if statements without curly braces
4142	src/pipe/common/dataLayer/DataLayer.java	1761	Avoid using for statements without curly braces
4143	src/pipe/common/dataLayer/DataLayer.java	1779	Avoid using if statements without curly braces
4144	src/pipe/common/dataLayer/DataLayer.java	1813	Avoid using if...else statements without curly braces
4145	src/pipe/common/dataLayer/DataLayer.java	1814	Avoid using if...else statements without curly braces
4146	src/pipe/common/dataLayer/DataLayer.java	1848	Avoid using if...else statements without curly braces
4147	src/pipe/common/dataLayer/DataLayer.java	1907	A method should have only one exit point, and that should be the last statement in the method
4148	src/pipe/common/dataLayer/DataLayer.java	1969	No need to check for null before an instanceof
4149	src/pipe/common/dataLayer/DataLayer.java	2098	Returning 'currentMarkingVector' may expose an internal array.
4150	src/pipe/common/dataLayer/DataLayer.java	2140	Returning 'initialMarkingVector' may expose an internal array.
4151	src/pipe/common/dataLayer/DataLayer.java	2174	A method should have only one exit point, and that should be the last statement in the method
4152	src/pipe/common/dataLayer/DataLayer.java	2318	A method should have only one exit point, and that should be the last statement in the method
4153	src/pipe/common/dataLayer/DataLayer.java	2341	A method should have only one exit point, and that should be the last statement in the method
4154	src/pipe/common/dataLayer/DataLayer.java	2345	A method should have only one exit point, and that should be the last statement in the method
4155	src/pipe/common/dataLayer/DataLayer.java	2940	Parameter 'valid' is not assigned and could be declared final
4156	src/pipe/common/dataLayer/DataLayer.java	2963	Avoid unnecessary if..then..else statements when returning a boolean
4157	src/pipe/common/dataLayer/DataLayer.java	2977	Avoid really long methods.
4158	src/pipe/common/dataLayer/DataLayer.java	2993	Avoid unused local variables such as 'noTaggedPlacesUntaggedArc'.
4159	src/pipe/common/dataLayer/DataLayer.java	2994	Avoid unused local variables such as 'noTaggedInArcs'.
4160	src/pipe/common/dataLayer/DataLayer.java	3079	Prefer StringBuffer over += for concatenating strings
4161	src/pipe/common/dataLayer/DataLayer.java	3112	Prefer StringBuffer over += for concatenating strings
4162	src/pipe/common/dataLayer/DataLayer.java	3126	Prefer StringBuffer over += for concatenating strings
4163	src/pipe/common/dataLayer/DataLayer.java	3150	Prefer StringBuffer over += for concatenating strings
4164	src/pipe/common/dataLayer/DataLayer.java	3161	Prefer StringBuffer over += for concatenating strings
4165	src/pipe/common/dataLayer/DataLayer.java	3199	Parameter 'placeName' is not assigned and could be declared final
4166	src/pipe/common/dataLayer/DataLayerWriter.java	1	Package name contains upper case characters
4167	src/pipe/common/dataLayer/DataLayerWriter.java	32	The class 'DataLayerWriter' has a Cyclomatic Complexity of 7 (Highest = 14).
4168	src/pipe/common/dataLayer/DataLayerWriter.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
4169	src/pipe/common/dataLayer/DataLayerWriter.java	51	The method createAnnotationNoteElement() has an NPath complexity of 6252
4170	src/pipe/common/dataLayer/DataLayerWriter.java	54	Found 'DD'-anomaly for variable 'labelElement' (lines '54'-'57').
4171	src/pipe/common/dataLayer/DataLayerWriter.java	76	Avoid if (x != y) ..; else ..;
4172	src/pipe/common/dataLayer/DataLayerWriter.java	91	The method createArcElement() has an NPath complexity of 252
4173	src/pipe/common/dataLayer/DataLayerWriter.java	93	Found 'DD'-anomaly for variable 'arcElement' (lines '93'-'97').
4174	src/pipe/common/dataLayer/DataLayerWriter.java	109	Avoid if (x != y) ..; else ..;
4175	src/pipe/common/dataLayer/DataLayerWriter.java	109	The String literal "error" appears 4 times in this file; the first occurrence is on line 109
4176	src/pipe/common/dataLayer/DataLayerWriter.java	110	Avoid if (x != y) ..; else ..;
4177	src/pipe/common/dataLayer/DataLayerWriter.java	111	Avoid if (x != y) ..; else ..;
4178	src/pipe/common/dataLayer/DataLayerWriter.java	123	Avoid variables with short names like x
4179	src/pipe/common/dataLayer/DataLayerWriter.java	124	Avoid variables with short names like y
4180	src/pipe/common/dataLayer/DataLayerWriter.java	127	Avoid variables with short names like id
4181	src/pipe/common/dataLayer/DataLayerWriter.java	129	Found 'DD'-anomaly for variable 'arcPoint' (lines '129'-'132').
4182	src/pipe/common/dataLayer/DataLayerWriter.java	137	Prefer StringBuffer over += for concatenating strings
4183	src/pipe/common/dataLayer/DataLayerWriter.java	141	Prefer StringBuffer over += for concatenating strings
4184	src/pipe/common/dataLayer/DataLayerWriter.java	153	Found 'DD'-anomaly for variable 'stateCondition' (lines '153'-'157').
4185	src/pipe/common/dataLayer/DataLayerWriter.java	174	The method 'createPlaceElement' has a Cyclomatic Complexity of 11.
4186	src/pipe/common/dataLayer/DataLayerWriter.java	174	The method createPlaceElement() has an NPath complexity of 281252
4187	src/pipe/common/dataLayer/DataLayerWriter.java	177	Found 'DD'-anomaly for variable 'placeElement' (lines '177'-'181').
4188	src/pipe/common/dataLayer/DataLayerWriter.java	192	Avoid excessively long variable names like initialMarkingInput
4189	src/pipe/common/dataLayer/DataLayerWriter.java	193	Avoid excessively long variable names like markingOffsetXInput
4190	src/pipe/common/dataLayer/DataLayerWriter.java	194	Avoid excessively long variable names like markingOffsetYInput
4191	src/pipe/common/dataLayer/DataLayerWriter.java	197	Avoid if (x != y) ..; else ..;
4192	src/pipe/common/dataLayer/DataLayerWriter.java	237	Found 'DD'-anomaly for variable 'stateGroupElement' (lines '237'-'241').
4193	src/pipe/common/dataLayer/DataLayerWriter.java	268	The method createTransitionElement() has an NPath complexity of 11252
4194	src/pipe/common/dataLayer/DataLayerWriter.java	270	Found 'DD'-anomaly for variable 'transitionElement' (lines '270'-'274').
4195	src/pipe/common/dataLayer/DataLayerWriter.java	317	Avoid really long methods.
4196	src/pipe/common/dataLayer/DataLayerWriter.java	317	The method 'savePNML' has a Cyclomatic Complexity of 14.
4197	src/pipe/common/dataLayer/DataLayerWriter.java	317	The method savePNML() has an NPath complexity of 224
4198	src/pipe/common/dataLayer/DataLayerWriter.java	323	Avoid throwing null pointer exceptions.
4199	src/pipe/common/dataLayer/DataLayerWriter.java	331	Found 'DD'-anomaly for variable 'pnDOM' (lines '331'-'340').
4200	src/pipe/common/dataLayer/DataLayerWriter.java	332	Avoid variables with short names like i
4201	src/pipe/common/dataLayer/DataLayerWriter.java	333	Found 'DD'-anomaly for variable 'xsltSource' (lines '333'-'421').
4202	src/pipe/common/dataLayer/DataLayerWriter.java	334	Found 'DD'-anomaly for variable 'transformer' (lines '334'-'427').
4203	src/pipe/common/dataLayer/DataLayerWriter.java	370	Assigning an Object to null is a code smell. Consider refactoring.
4204	src/pipe/common/dataLayer/DataLayerWriter.java	370	Found 'DU'-anomaly for variable 'places' (lines '370'-'478').
4205	src/pipe/common/dataLayer/DataLayerWriter.java	378	Assigning an Object to null is a code smell. Consider refactoring.
4206	src/pipe/common/dataLayer/DataLayerWriter.java	378	Found 'DU'-anomaly for variable 'labels' (lines '378'-'478').
4207	src/pipe/common/dataLayer/DataLayerWriter.java	386	Assigning an Object to null is a code smell. Consider refactoring.
4208	src/pipe/common/dataLayer/DataLayerWriter.java	386	Found 'DU'-anomaly for variable 'transitions' (lines '386'-'478').
4209	src/pipe/common/dataLayer/DataLayerWriter.java	393	Found 'DD'-anomaly for variable 'point' (lines '393'-'393').
4210	src/pipe/common/dataLayer/DataLayerWriter.java	393	Found 'DU'-anomaly for variable 'point' (lines '393'-'478').
4211	src/pipe/common/dataLayer/DataLayerWriter.java	401	Assigning an Object to null is a code smell. Consider refactoring.
4212	src/pipe/common/dataLayer/DataLayerWriter.java	401	Found 'DU'-anomaly for variable 'arcs' (lines '401'-'478').
4213	src/pipe/common/dataLayer/DataLayerWriter.java	409	Found 'DD'-anomaly for variable 'conditions' (lines '409'-'409').
4214	src/pipe/common/dataLayer/DataLayerWriter.java	409	Found 'DU'-anomaly for variable 'conditions' (lines '409'-'478').
4215	src/pipe/common/dataLayer/DataLayerWriter.java	417	Assigning an Object to null is a code smell. Consider refactoring.
4216	src/pipe/common/dataLayer/DataLayerWriter.java	417	Found 'DU'-anomaly for variable 'stateGroups' (lines '417'-'478').
4217	src/pipe/common/dataLayer/DataLayerWriter.java	429	Avoid excessively long variable names like outputObjectArrayList
4218	src/pipe/common/dataLayer/DataLayerWriter.java	440	System.out.print is used
4219	src/pipe/common/dataLayer/DataLayerWriter.java	441	The String literal "\" transformer=\"" appears 4 times in this file; the first occurrence is on line 441
4220	src/pipe/common/dataLayer/DataLayerWriter.java	441	The String literal "\" xslt=\"" appears 4 times in this file; the first occurrence is on line 441
4221	src/pipe/common/dataLayer/DataLayerWriter.java	448	System.out.print is used
4222	src/pipe/common/dataLayer/DataLayerWriter.java	459	System.out.print is used
4223	src/pipe/common/dataLayer/DataLayerWriter.java	470	System.out.print is used
4224	src/pipe/common/dataLayer/DoubleTupleWritable.java	1	Package name contains upper case characters
4225	src/pipe/common/dataLayer/DoubleTupleWritable.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
4226	src/pipe/common/dataLayer/DoubleTupleWritable.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
4227	src/pipe/common/dataLayer/DoubleTupleWritable.java	13	Document empty constructor
4228	src/pipe/common/dataLayer/DoubleTupleWritable.java	16	Avoid variables with short names like v1
4229	src/pipe/common/dataLayer/DoubleTupleWritable.java	16	Avoid variables with short names like v2
4230	src/pipe/common/dataLayer/DoubleTupleWritable.java	17	Overridable method 'set' called during object construction
4231	src/pipe/common/dataLayer/DoubleTupleWritable.java	21	Avoid variables with short names like o
4232	src/pipe/common/dataLayer/DoubleTupleWritable.java	35	Avoid variables with short names like o
4233	src/pipe/common/dataLayer/DoubleTupleWritable.java	39	A method should have only one exit point, and that should be the last statement in the method
4234	src/pipe/common/dataLayer/DoubleTupleWritable.java	61	Avoid variables with short names like in
4235	src/pipe/common/dataLayer/DoubleWritable.java	1	Package name contains upper case characters
4236	src/pipe/common/dataLayer/DoubleWritable.java	27	Avoid variables with short names like b1
4237	src/pipe/common/dataLayer/DoubleWritable.java	28	Avoid variables with short names like s1
4238	src/pipe/common/dataLayer/DoubleWritable.java	29	Avoid variables with short names like l1
4239	src/pipe/common/dataLayer/DoubleWritable.java	30	Avoid variables with short names like b2
4240	src/pipe/common/dataLayer/DoubleWritable.java	31	Avoid variables with short names like s2
4241	src/pipe/common/dataLayer/DoubleWritable.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
4242	src/pipe/common/dataLayer/DoubleWritable.java	47	Document empty constructor
4243	src/pipe/common/dataLayer/DoubleWritable.java	51	Overridable method 'set' called during object construction
4244	src/pipe/common/dataLayer/DoubleWritable.java	71	A method should have only one exit point, and that should be the last statement in the method
4245	src/pipe/common/dataLayer/DynamicMarking.java	1	Package name contains upper case characters
4246	src/pipe/common/dataLayer/DynamicMarking.java	21	Avoid modifiers which are implied by the context
4247	src/pipe/common/dataLayer/DynamicMarking.java	30	Avoid modifiers which are implied by the context
4248	src/pipe/common/dataLayer/EulerSequenceFileInputFormat.java	1	Package name contains upper case characters
4249	src/pipe/common/dataLayer/EulerSequenceFileInputFormat.java	29	It is a good practice to call super() in a constructor
4250	src/pipe/common/dataLayer/EulerSequenceFileInputFormat.java	52	Avoid instantiating new objects inside loops
4251	src/pipe/common/dataLayer/FiringTaggedButton.java	1	Package name contains upper case characters
4252	src/pipe/common/dataLayer/FiringTaggedButton.java	3	Avoid unused imports such as 'java.awt.Color'
4253	src/pipe/common/dataLayer/FiringTaggedButton.java	3	Avoid unused imports such as 'java.awt.Color'
4254	src/pipe/common/dataLayer/FiringTaggedButton.java	6	Avoid unused imports such as 'java.awt.event.MouseEvent'
4255	src/pipe/common/dataLayer/FiringTaggedButton.java	6	Avoid unused imports such as 'java.awt.event.MouseEvent'
4256	src/pipe/common/dataLayer/FiringTaggedButton.java	7	Avoid unused imports such as 'java.awt.event.MouseListener'
4257	src/pipe/common/dataLayer/FiringTaggedButton.java	7	Avoid unused imports such as 'java.awt.event.MouseListener'
4258	src/pipe/common/dataLayer/FiringTaggedButton.java	9	Avoid unused imports such as 'java.awt.geom.GeneralPath'
4259	src/pipe/common/dataLayer/FiringTaggedButton.java	9	Avoid unused imports such as 'java.awt.geom.GeneralPath'
4260	src/pipe/common/dataLayer/FiringTaggedButton.java	11	Avoid unused imports such as 'javax.swing.JButton'
4261	src/pipe/common/dataLayer/FiringTaggedButton.java	11	Avoid unused imports such as 'javax.swing.JButton'
4262	src/pipe/common/dataLayer/FiringTaggedButton.java	20	Avoid excessively long variable names like firingTaggedButton
4263	src/pipe/common/dataLayer/FiringTaggedButton.java	20	Avoid unused private fields such as 'firingTaggedButton'.
4264	src/pipe/common/dataLayer/FiringTaggedButton.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
4265	src/pipe/common/dataLayer/FiringTaggedButton.java	20	It is somewhat confusing to have a field name matching the declaring class name
4266	src/pipe/common/dataLayer/FiringTaggedButton.java	20	Perhaps 'firingTaggedButton' could be replaced by a local variable.
4267	src/pipe/common/dataLayer/FiringTaggedButton.java	20	Private field 'firingTaggedButton' could be made final; it is only initialized in the declaration or constructor.
4268	src/pipe/common/dataLayer/FiringTaggedButton.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
4269	src/pipe/common/dataLayer/FiringTaggedButton.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
4270	src/pipe/common/dataLayer/FiringTaggedButton.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
4271	src/pipe/common/dataLayer/FiringTaggedButton.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
4272	src/pipe/common/dataLayer/FiringTaggedButton.java	23	Use explicit scoping instead of the default package private level
4273	src/pipe/common/dataLayer/FiringTaggedButton.java	27	Avoid variables with short names like x
4274	src/pipe/common/dataLayer/FiringTaggedButton.java	27	Avoid variables with short names like y
4275	src/pipe/common/dataLayer/FiringTaggedButton.java	27	It is a good practice to call super() in a constructor
4276	src/pipe/common/dataLayer/FiringTaggedButton.java	34	Overridable method 'setPositionX' called during object construction
4277	src/pipe/common/dataLayer/FiringTaggedButton.java	35	Overridable method 'setPositionY' called during object construction
4278	src/pipe/common/dataLayer/FiringTaggedButton.java	56	Avoid if (x != y) ..; else ..;
4279	src/pipe/common/dataLayer/FiringTaggedButton.java	75	Avoid if (x != y) ..; else ..;
4280	src/pipe/common/dataLayer/FiringTaggedButton.java	86	Avoid variables with short names like x
4281	src/pipe/common/dataLayer/FiringTaggedButton.java	86	Avoid variables with short names like y
4282	src/pipe/common/dataLayer/FiringTaggedButton.java	93	Avoid variables with short names like g
4283	src/pipe/common/dataLayer/FiringTaggedButton.java	117	Found 'DD'-anomaly for variable 'scaleFactor' (lines '117'-'120').
4284	src/pipe/common/dataLayer/NameLabel.java	1	Package name contains upper case characters
4285	src/pipe/common/dataLayer/NameLabel.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
4286	src/pipe/common/dataLayer/NameLabel.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4287	src/pipe/common/dataLayer/NameLabel.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
4288	src/pipe/common/dataLayer/NameLabel.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
4289	src/pipe/common/dataLayer/NameLabel.java	30	Avoid variables with short names like id
4290	src/pipe/common/dataLayer/NameLabel.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
4291	src/pipe/common/dataLayer/NameLabel.java	65	clone() method should throw CloneNotSupportedException
4292	src/pipe/common/dataLayer/NameLabel.java	69	A method should have only one exit point, and that should be the last statement in the method
4293	src/pipe/common/dataLayer/NameLabel.java	73	Avoid printStackTrace(); use a logger call instead.
4294	src/pipe/common/dataLayer/NameLabel.java	98	Avoid variables with short names like x
4295	src/pipe/common/dataLayer/NameLabel.java	98	Avoid variables with short names like y
4296	src/pipe/common/dataLayer/NameLabel.java	105	Avoid variables with short names like x
4297	src/pipe/common/dataLayer/NameLabel.java	105	Avoid variables with short names like y
4298	src/pipe/common/dataLayer/PNMLTransformer.java	1	Package name contains upper case characters
4299	src/pipe/common/dataLayer/PNMLTransformer.java	31	Avoid unnecessary constructors - the compiler will generate these for you
4300	src/pipe/common/dataLayer/PNMLTransformer.java	31	Document empty constructor
4301	src/pipe/common/dataLayer/PNMLTransformer.java	47	Found 'DD'-anomaly for variable 'document' (lines '47'-'57').
4302	src/pipe/common/dataLayer/PNMLTransformer.java	52	Avoid excessively long variable names like documentBuilderFactory
4303	src/pipe/common/dataLayer/PNMLTransformer.java	62	System.out.print is used
4304	src/pipe/common/dataLayer/PNMLTransformer.java	66	System.out.print is used
4305	src/pipe/common/dataLayer/PNMLTransformer.java	67	System.out.print is used
4306	src/pipe/common/dataLayer/PNMLTransformer.java	72	System.out.print is used
4307	src/pipe/common/dataLayer/PNMLTransformer.java	74	System.out.print is used
4308	src/pipe/common/dataLayer/PNMLTransformer.java	94	Found 'DD'-anomaly for variable 'document' (lines '94'-'104').
4309	src/pipe/common/dataLayer/PNMLTransformer.java	99	Avoid excessively long variable names like documentBuilderFactory
4310	src/pipe/common/dataLayer/PNMLTransformer.java	141	Avoid excessively long variable names like outputObjectArrayList
4311	src/pipe/common/dataLayer/PNMLTransformer.java	141	Found 'DD'-anomaly for variable 'outputObjectArrayList' (lines '141'-'157').
4312	src/pipe/common/dataLayer/PNMLTransformer.java	142	Found 'DD'-anomaly for variable 'document' (lines '142'-'168').
4313	src/pipe/common/dataLayer/PNMatrix.java	26	Package name contains upper case characters
4314	src/pipe/common/dataLayer/PNMatrix.java	26	This class has a bunch of public methods and attributes
4315	src/pipe/common/dataLayer/PNMatrix.java	36	Avoid really long classes.
4316	src/pipe/common/dataLayer/PNMatrix.java	36	The class 'PNMatrix' has a Cyclomatic Complexity of 3 (Highest = 11).
4317	src/pipe/common/dataLayer/PNMatrix.java	37	This class has too many methods, consider refactoring it.
4318	src/pipe/common/dataLayer/PNMatrix.java	49	Avoid variables with short names like A
4319	src/pipe/common/dataLayer/PNMatrix.java	51	Avoid variables with short names like m
4320	src/pipe/common/dataLayer/PNMatrix.java	52	Avoid variables with short names like n
4321	src/pipe/common/dataLayer/PNMatrix.java	53	Avoid variables with short names like X
4322	src/pipe/common/dataLayer/PNMatrix.java	54	Avoid variables with short names like C
4323	src/pipe/common/dataLayer/PNMatrix.java	54	Found 'DD'-anomaly for variable 'C' (lines '54'-'63').
4324	src/pipe/common/dataLayer/PNMatrix.java	54	Found 'DU'-anomaly for variable 'C' (lines '54'-'67').
4325	src/pipe/common/dataLayer/PNMatrix.java	63	Found 'DD'-anomaly for variable 'C' (lines '63'-'63').
4326	src/pipe/common/dataLayer/PNMatrix.java	63	Found 'DU'-anomaly for variable 'C' (lines '63'-'67').
4327	src/pipe/common/dataLayer/PNMatrix.java	83	Found 'DD'-anomaly for variable 'X' (lines '83'-'88').
4328	src/pipe/common/dataLayer/PNMatrix.java	83	Found 'DU'-anomaly for variable 'X' (lines '83'-'92').
4329	src/pipe/common/dataLayer/PNMatrix.java	88	Found 'DD'-anomaly for variable 'X' (lines '88'-'88').
4330	src/pipe/common/dataLayer/PNMatrix.java	88	Found 'DU'-anomaly for variable 'X' (lines '88'-'92').
4331	src/pipe/common/dataLayer/PNMatrix.java	99	Found non-transient, non-static member. Please mark as transient or provide accessors.
4332	src/pipe/common/dataLayer/PNMatrix.java	99	The field name indicates a constant but its modifiers do not
4333	src/pipe/common/dataLayer/PNMatrix.java	107	Found non-transient, non-static member. Please mark as transient or provide accessors.
4334	src/pipe/common/dataLayer/PNMatrix.java	107	Found non-transient, non-static member. Please mark as transient or provide accessors.
4335	src/pipe/common/dataLayer/PNMatrix.java	110	Found non-transient, non-static member. Please mark as transient or provide accessors.
4336	src/pipe/common/dataLayer/PNMatrix.java	143	Avoid if (x != y) ..; else ..;
4337	src/pipe/common/dataLayer/PNMatrix.java	193	The user-supplied array 'A' is stored directly.
4338	src/pipe/common/dataLayer/PNMatrix.java	193	The user-supplied array 'A' is stored directly.
4339	src/pipe/common/dataLayer/PNMatrix.java	193	The user-supplied array 'A' is stored directly.
4340	src/pipe/common/dataLayer/PNMatrix.java	202	Deeply nested if..then statements are hard to read
4341	src/pipe/common/dataLayer/PNMatrix.java	224	The user-supplied array 'A' is stored directly.
4342	src/pipe/common/dataLayer/PNMatrix.java	257	New exception is thrown in catch block, original stack trace may be lost
4343	src/pipe/common/dataLayer/PNMatrix.java	272	Found 'DU'-anomaly for variable 'cardRow' (lines '272'-'308').
4344	src/pipe/common/dataLayer/PNMatrix.java	277	Found 'DD'-anomaly for variable 'countpMinus' (lines '277'-'284').
4345	src/pipe/common/dataLayer/PNMatrix.java	277	Found 'DD'-anomaly for variable 'countpPlus' (lines '277'-'283').
4346	src/pipe/common/dataLayer/PNMatrix.java	283	Found 'DD'-anomaly for variable 'countpPlus' (lines '283'-'292').
4347	src/pipe/common/dataLayer/PNMatrix.java	284	Found 'DD'-anomaly for variable 'countpMinus' (lines '284'-'299').
4348	src/pipe/common/dataLayer/PNMatrix.java	285	Found 'DU'-anomaly for variable 'pPlus' (lines '285'-'308').
4349	src/pipe/common/dataLayer/PNMatrix.java	286	Found 'DD'-anomaly for variable 'pMinus' (lines '286'-'286').
4350	src/pipe/common/dataLayer/PNMatrix.java	286	Found 'DU'-anomaly for variable 'pMinus' (lines '286'-'308').
4351	src/pipe/common/dataLayer/PNMatrix.java	292	Found 'DD'-anomaly for variable 'countpPlus' (lines '292'-'292').
4352	src/pipe/common/dataLayer/PNMatrix.java	299	Found 'DD'-anomaly for variable 'countpMinus' (lines '299'-'299').
4353	src/pipe/common/dataLayer/PNMatrix.java	304	A method should have only one exit point, and that should be the last statement in the method
4354	src/pipe/common/dataLayer/PNMatrix.java	320	Found 'DU'-anomaly for variable 'k' (lines '320'-'358').
4355	src/pipe/common/dataLayer/PNMatrix.java	322	Found 'DD'-anomaly for variable 'countpMinus' (lines '322'-'329').
4356	src/pipe/common/dataLayer/PNMatrix.java	322	Found 'DD'-anomaly for variable 'countpPlus' (lines '322'-'328').
4357	src/pipe/common/dataLayer/PNMatrix.java	328	Found 'DD'-anomaly for variable 'countpPlus' (lines '328'-'337').
4358	src/pipe/common/dataLayer/PNMatrix.java	329	Found 'DD'-anomaly for variable 'countpMinus' (lines '329'-'344').
4359	src/pipe/common/dataLayer/PNMatrix.java	329	Found 'DU'-anomaly for variable 'countpMinus' (lines '329'-'358').
4360	src/pipe/common/dataLayer/PNMatrix.java	330	Found 'DU'-anomaly for variable 'pPlus' (lines '330'-'358').
4361	src/pipe/common/dataLayer/PNMatrix.java	331	Found 'DD'-anomaly for variable 'pMinus' (lines '331'-'331').
4362	src/pipe/common/dataLayer/PNMatrix.java	331	Found 'DU'-anomaly for variable 'pMinus' (lines '331'-'358').
4363	src/pipe/common/dataLayer/PNMatrix.java	337	Found 'DD'-anomaly for variable 'countpPlus' (lines '337'-'337').
4364	src/pipe/common/dataLayer/PNMatrix.java	344	Found 'DD'-anomaly for variable 'countpMinus' (lines '344'-'344').
4365	src/pipe/common/dataLayer/PNMatrix.java	344	Found 'DU'-anomaly for variable 'countpMinus' (lines '344'-'358').
4366	src/pipe/common/dataLayer/PNMatrix.java	349	A method should have only one exit point, and that should be the last statement in the method
4367	src/pipe/common/dataLayer/PNMatrix.java	353	A method should have only one exit point, and that should be the last statement in the method
4368	src/pipe/common/dataLayer/PNMatrix.java	367	The method 'checkCase11' has a Cyclomatic Complexity of 11.
4369	src/pipe/common/dataLayer/PNMatrix.java	369	Avoid using final local variables, turn them into fields
4370	src/pipe/common/dataLayer/PNMatrix.java	369	Found 'DU'-anomaly for variable 'satisfies11' (lines '369'-'419').
4371	src/pipe/common/dataLayer/PNMatrix.java	372	Found 'DD'-anomaly for variable 'pMinusEmpty' (lines '372'-'379').
4372	src/pipe/common/dataLayer/PNMatrix.java	372	Found 'DD'-anomaly for variable 'pPlusEmpty' (lines '372'-'378').
4373	src/pipe/common/dataLayer/PNMatrix.java	378	Found 'DD'-anomaly for variable 'pPlusEmpty' (lines '378'-'390').
4374	src/pipe/common/dataLayer/PNMatrix.java	379	Found 'DD'-anomaly for variable 'pMinusEmpty' (lines '379'-'398').
4375	src/pipe/common/dataLayer/PNMatrix.java	390	Found 'DD'-anomaly for variable 'pPlusEmpty' (lines '390'-'390').
4376	src/pipe/common/dataLayer/PNMatrix.java	398	Found 'DD'-anomaly for variable 'pMinusEmpty' (lines '398'-'398').
4377	src/pipe/common/dataLayer/PNMatrix.java	405	A method should have only one exit point, and that should be the last statement in the method
4378	src/pipe/common/dataLayer/PNMatrix.java	410	Found 'DD'-anomaly for variable 'pPlus' (lines '410'-'380').
4379	src/pipe/common/dataLayer/PNMatrix.java	410	Found 'DD'-anomaly for variable 'pPlus' (lines '410'-'410').
4380	src/pipe/common/dataLayer/PNMatrix.java	410	Found 'DU'-anomaly for variable 'pPlus' (lines '410'-'419').
4381	src/pipe/common/dataLayer/PNMatrix.java	415	Found 'DD'-anomaly for variable 'pMinus' (lines '415'-'381').
4382	src/pipe/common/dataLayer/PNMatrix.java	415	Found 'DD'-anomaly for variable 'pMinus' (lines '415'-'415').
4383	src/pipe/common/dataLayer/PNMatrix.java	415	Found 'DU'-anomaly for variable 'pMinus' (lines '415'-'419').
4384	src/pipe/common/dataLayer/PNMatrix.java	442	clone() method should be implemented only if implementing Cloneable interface
4385	src/pipe/common/dataLayer/PNMatrix.java	443	clone() method should be implemented only if implementing Cloneable interface
4386	src/pipe/common/dataLayer/PNMatrix.java	443	clone() method should throw CloneNotSupportedException
4387	src/pipe/common/dataLayer/PNMatrix.java	456	Avoid using final local variables, turn them into fields
4388	src/pipe/common/dataLayer/PNMatrix.java	456	Found 'DU'-anomaly for variable 'js' (lines '456'-'500').
4389	src/pipe/common/dataLayer/PNMatrix.java	461	Found 'DD'-anomaly for variable 'countpMinus' (lines '461'-'468').
4390	src/pipe/common/dataLayer/PNMatrix.java	461	Found 'DD'-anomaly for variable 'countpPlus' (lines '461'-'467').
4391	src/pipe/common/dataLayer/PNMatrix.java	467	Found 'DD'-anomaly for variable 'countpPlus' (lines '467'-'476').
4392	src/pipe/common/dataLayer/PNMatrix.java	468	Found 'DD'-anomaly for variable 'countpMinus' (lines '468'-'483').
4393	src/pipe/common/dataLayer/PNMatrix.java	468	Found 'DU'-anomaly for variable 'countpMinus' (lines '468'-'500').
4394	src/pipe/common/dataLayer/PNMatrix.java	469	Found 'DU'-anomaly for variable 'pPlus' (lines '469'-'500').
4395	src/pipe/common/dataLayer/PNMatrix.java	470	Found 'DD'-anomaly for variable 'pMinus' (lines '470'-'470').
4396	src/pipe/common/dataLayer/PNMatrix.java	470	Found 'DU'-anomaly for variable 'pMinus' (lines '470'-'500').
4397	src/pipe/common/dataLayer/PNMatrix.java	476	Found 'DD'-anomaly for variable 'countpPlus' (lines '476'-'476').
4398	src/pipe/common/dataLayer/PNMatrix.java	483	Found 'DD'-anomaly for variable 'countpMinus' (lines '483'-'483').
4399	src/pipe/common/dataLayer/PNMatrix.java	483	Found 'DU'-anomaly for variable 'countpMinus' (lines '483'-'500').
4400	src/pipe/common/dataLayer/PNMatrix.java	490	A method should have only one exit point, and that should be the last statement in the method
4401	src/pipe/common/dataLayer/PNMatrix.java	511	Found 'DD'-anomaly for variable 'C' (lines '511'-'516').
4402	src/pipe/common/dataLayer/PNMatrix.java	511	Found 'DU'-anomaly for variable 'C' (lines '511'-'520').
4403	src/pipe/common/dataLayer/PNMatrix.java	516	Found 'DD'-anomaly for variable 'C' (lines '516'-'516').
4404	src/pipe/common/dataLayer/PNMatrix.java	516	Found 'DU'-anomaly for variable 'C' (lines '516'-'520').
4405	src/pipe/common/dataLayer/PNMatrix.java	553	Found 'DD'-anomaly for variable 'reduced' (lines '553'-'572').
4406	src/pipe/common/dataLayer/PNMatrix.java	554	Found 'DD'-anomaly for variable 'cols' (lines '554'-'564').
4407	src/pipe/common/dataLayer/PNMatrix.java	556	Found 'DU'-anomaly for variable 'count' (lines '556'-'576').
4408	src/pipe/common/dataLayer/PNMatrix.java	564	Found 'DD'-anomaly for variable 'cols' (lines '564'-'564').
4409	src/pipe/common/dataLayer/PNMatrix.java	587	Found 'DU'-anomaly for variable 'k' (lines '587'-'632').
4410	src/pipe/common/dataLayer/PNMatrix.java	590	Found 'DD'-anomaly for variable 'X' (lines '590'-'598').
4411	src/pipe/common/dataLayer/PNMatrix.java	590	Found 'DU'-anomaly for variable 'X' (lines '590'-'632').
4412	src/pipe/common/dataLayer/PNMatrix.java	592	Found 'DD'-anomaly for variable 'Y' (lines '592'-'603').
4413	src/pipe/common/dataLayer/PNMatrix.java	592	Found 'DU'-anomaly for variable 'Y' (lines '592'-'632').
4414	src/pipe/common/dataLayer/PNMatrix.java	594	Found 'DD'-anomaly for variable 'Z' (lines '594'-'604').
4415	src/pipe/common/dataLayer/PNMatrix.java	594	Found 'DU'-anomaly for variable 'Z' (lines '594'-'632').
4416	src/pipe/common/dataLayer/PNMatrix.java	598	Found 'DD'-anomaly for variable 'X' (lines '598'-'598').
4417	src/pipe/common/dataLayer/PNMatrix.java	598	Found 'DU'-anomaly for variable 'X' (lines '598'-'632').
4418	src/pipe/common/dataLayer/PNMatrix.java	647	Found 'DD'-anomaly for variable 'k' (lines '647'-'655').
4419	src/pipe/common/dataLayer/PNMatrix.java	648	Found 'DU'-anomaly for variable 'count' (lines '648'-'659').
4420	src/pipe/common/dataLayer/PNMatrix.java	653	Avoid assignments in operands
4421	src/pipe/common/dataLayer/PNMatrix.java	653	Found 'DD'-anomaly for variable 'anElement' (lines '653'-'653').
4422	src/pipe/common/dataLayer/PNMatrix.java	653	Found 'DU'-anomaly for variable 'anElement' (lines '653'-'659').
4423	src/pipe/common/dataLayer/PNMatrix.java	655	Found 'DD'-anomaly for variable 'k' (lines '655'-'655').
4424	src/pipe/common/dataLayer/PNMatrix.java	673	Found 'DD'-anomaly for variable 'k' (lines '673'-'680').
4425	src/pipe/common/dataLayer/PNMatrix.java	674	Found 'DU'-anomaly for variable 'count' (lines '674'-'684').
4426	src/pipe/common/dataLayer/PNMatrix.java	680	Found 'DD'-anomaly for variable 'k' (lines '680'-'680').
4427	src/pipe/common/dataLayer/PNMatrix.java	698	Found 'DU'-anomaly for variable 'k' (lines '698'-'708').
4428	src/pipe/common/dataLayer/PNMatrix.java	719	Found 'DU'-anomaly for variable 'n' (lines '719'-'733').
4429	src/pipe/common/dataLayer/PNMatrix.java	720	Found 'DU'-anomaly for variable 'h' (lines '720'-'733').
4430	src/pipe/common/dataLayer/PNMatrix.java	766	Avoid reassigning parameters such as 'a'
4431	src/pipe/common/dataLayer/PNMatrix.java	766	Avoid reassigning parameters such as 'a'
4432	src/pipe/common/dataLayer/PNMatrix.java	766	Avoid reassigning parameters such as 'a'
4433	src/pipe/common/dataLayer/PNMatrix.java	766	Avoid reassigning parameters such as 'b'
4434	src/pipe/common/dataLayer/PNMatrix.java	766	Avoid reassigning parameters such as 'b'
4435	src/pipe/common/dataLayer/PNMatrix.java	780	Avoid if (x != y) ..; else ..;
4436	src/pipe/common/dataLayer/PNMatrix.java	790	Avoid if (x != y) ..; else ..;
4437	src/pipe/common/dataLayer/PNMatrix.java	826	Returning 'A' may expose an internal array.
4438	src/pipe/common/dataLayer/PNMatrix.java	837	Found 'DD'-anomaly for variable 'C' (lines '837'-'842').
4439	src/pipe/common/dataLayer/PNMatrix.java	842	Found 'DD'-anomaly for variable 'C' (lines '842'-'842').
4440	src/pipe/common/dataLayer/PNMatrix.java	867	Found 'DD'-anomaly for variable 'vals' (lines '867'-'872').
4441	src/pipe/common/dataLayer/PNMatrix.java	872	Found 'DD'-anomaly for variable 'vals' (lines '872'-'872').
4442	src/pipe/common/dataLayer/PNMatrix.java	897	Found 'DD'-anomaly for variable 'B' (lines '897'-'904').
4443	src/pipe/common/dataLayer/PNMatrix.java	897	Found 'DU'-anomaly for variable 'B' (lines '897'-'913').
4444	src/pipe/common/dataLayer/PNMatrix.java	904	Found 'DD'-anomaly for variable 'B' (lines '904'-'904').
4445	src/pipe/common/dataLayer/PNMatrix.java	904	Found 'DU'-anomaly for variable 'B' (lines '904'-'913').
4446	src/pipe/common/dataLayer/PNMatrix.java	910	New exception is thrown in catch block, original stack trace may be lost
4447	src/pipe/common/dataLayer/PNMatrix.java	910	The String literal "Submatrix indices" appears 10 times in this file; the first occurrence is on line 910
4448	src/pipe/common/dataLayer/PNMatrix.java	932	Found 'DD'-anomaly for variable 'B' (lines '932'-'939').
4449	src/pipe/common/dataLayer/PNMatrix.java	932	Found 'DU'-anomaly for variable 'B' (lines '932'-'948').
4450	src/pipe/common/dataLayer/PNMatrix.java	939	Found 'DD'-anomaly for variable 'B' (lines '939'-'939').
4451	src/pipe/common/dataLayer/PNMatrix.java	939	Found 'DU'-anomaly for variable 'B' (lines '939'-'948').
4452	src/pipe/common/dataLayer/PNMatrix.java	945	New exception is thrown in catch block, original stack trace may be lost
4453	src/pipe/common/dataLayer/PNMatrix.java	968	Found 'DD'-anomaly for variable 'B' (lines '968'-'975').
4454	src/pipe/common/dataLayer/PNMatrix.java	968	Found 'DU'-anomaly for variable 'B' (lines '968'-'984').
4455	src/pipe/common/dataLayer/PNMatrix.java	975	Found 'DD'-anomaly for variable 'B' (lines '975'-'975').
4456	src/pipe/common/dataLayer/PNMatrix.java	975	Found 'DU'-anomaly for variable 'B' (lines '975'-'984').
4457	src/pipe/common/dataLayer/PNMatrix.java	981	New exception is thrown in catch block, original stack trace may be lost
4458	src/pipe/common/dataLayer/PNMatrix.java	1001	Found 'DD'-anomaly for variable 'B' (lines '1,001'-'1,008').
4459	src/pipe/common/dataLayer/PNMatrix.java	1014	New exception is thrown in catch block, original stack trace may be lost
4460	src/pipe/common/dataLayer/PNMatrix.java	1150	Avoid using final local variables, turn them into fields
4461	src/pipe/common/dataLayer/PNMatrix.java	1172	Avoid using final local variables, turn them into fields
4462	src/pipe/common/dataLayer/PNMatrix.java	1193	Avoid using final local variables, turn them into fields
4463	src/pipe/common/dataLayer/PNMatrix.java	1314	Consider simply returning the value vs storing it in local variable 'X'
4464	src/pipe/common/dataLayer/PetriNetObject.java	1	Package name contains upper case characters
4465	src/pipe/common/dataLayer/PetriNetObject.java	32	Abstract classes should be named AbstractXXX
4466	src/pipe/common/dataLayer/PetriNetObject.java	33	This class has too many methods, consider refactoring it.
4467	src/pipe/common/dataLayer/PetriNetObject.java	35	Avoid excessively long variable names like COMPONENT_DRAW_OFFSET
4468	src/pipe/common/dataLayer/PetriNetObject.java	41	It is somewhat confusing to have a field name with the same name as a method
4469	src/pipe/common/dataLayer/PetriNetObject.java	48	Avoid variables with short names like id
4470	src/pipe/common/dataLayer/PetriNetObject.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
4471	src/pipe/common/dataLayer/PetriNetObject.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
4472	src/pipe/common/dataLayer/PetriNetObject.java	54	Avoid excessively long variable names like selectionBorderColour
4473	src/pipe/common/dataLayer/PetriNetObject.java	54	Found non-transient, non-static member. Please mark as transient or provide accessors.
4474	src/pipe/common/dataLayer/PetriNetObject.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
4475	src/pipe/common/dataLayer/PetriNetObject.java	70	Found non-transient, non-static member. Please mark as transient or provide accessors.
4476	src/pipe/common/dataLayer/PetriNetObject.java	81	Document empty constructor
4477	src/pipe/common/dataLayer/PetriNetObject.java	81	It is a good practice to call super() in a constructor
4478	src/pipe/common/dataLayer/PetriNetObject.java	92	It is a good practice to call super() in a constructor
4479	src/pipe/common/dataLayer/PetriNetObject.java	96	An empty method in an abstract class should be abstract instead
4480	src/pipe/common/dataLayer/PetriNetObject.java	97	Document empty method
4481	src/pipe/common/dataLayer/PetriNetObject.java	114	clone() method should throw CloneNotSupportedException
4482	src/pipe/common/dataLayer/PetriNetObject.java	139	Avoid throwing raw exception types.
4483	src/pipe/common/dataLayer/PetriNetObject.java	201	Avoid variables with short names like g
4484	src/pipe/common/dataLayer/PetriNetObject.java	201	Overriding method merely calls super
4485	src/pipe/common/dataLayer/PetriNetObject.java	208	Avoid variables with short names like c
4486	src/pipe/common/dataLayer/PetriNetObject.java	240	Avoid variables with short names like c
4487	src/pipe/common/dataLayer/PetriNetObject.java	250	Avoid variables with short names like c
4488	src/pipe/common/dataLayer/Place.java	1	Package name contains upper case characters
4489	src/pipe/common/dataLayer/Place.java	4	Avoid unused imports such as 'java.awt.Color'
4490	src/pipe/common/dataLayer/Place.java	4	Avoid unused imports such as 'java.awt.Color'
4491	src/pipe/common/dataLayer/Place.java	38	The class 'Place' has a Cyclomatic Complexity of 2 (Highest = 12).
4492	src/pipe/common/dataLayer/Place.java	45	Variables that are final and static should be in all caps.
4493	src/pipe/common/dataLayer/Place.java	55	It is somewhat confusing to have a field name matching the declaring class name
4494	src/pipe/common/dataLayer/Place.java	60	This statement may have some unnecessary parentheses
4495	src/pipe/common/dataLayer/Place.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
4496	src/pipe/common/dataLayer/Place.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
4497	src/pipe/common/dataLayer/Place.java	73	Found non-transient, non-static member. Please mark as transient or provide accessors.
4498	src/pipe/common/dataLayer/Place.java	79	Document empty constructor
4499	src/pipe/common/dataLayer/Place.java	79	It is a good practice to call super() in a constructor
4500	src/pipe/common/dataLayer/Place.java	145	Avoid really long parameter lists.
4501	src/pipe/common/dataLayer/Place.java	151	Avoid excessively long variable names like initialMarkingInput
4502	src/pipe/common/dataLayer/Place.java	152	Avoid excessively long variable names like markingOffsetXInput
4503	src/pipe/common/dataLayer/Place.java	153	Avoid excessively long variable names like markingOffsetYInput
4504	src/pipe/common/dataLayer/Place.java	156	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
4505	src/pipe/common/dataLayer/Place.java	157	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
4506	src/pipe/common/dataLayer/Place.java	192	Overriding method merely calls super
4507	src/pipe/common/dataLayer/Place.java	192	clone() method should throw CloneNotSupportedException
4508	src/pipe/common/dataLayer/Place.java	203	Avoid variables with short names like x
4509	src/pipe/common/dataLayer/Place.java	203	Avoid variables with short names like y
4510	src/pipe/common/dataLayer/Place.java	211	Avoid if (x != y) ..; else ..;
4511	src/pipe/common/dataLayer/Place.java	225	A method should have only one exit point, and that should be the last statement in the method
4512	src/pipe/common/dataLayer/Place.java	234	A method should have only one exit point, and that should be the last statement in the method
4513	src/pipe/common/dataLayer/Place.java	253	A method should have only one exit point, and that should be the last statement in the method
4514	src/pipe/common/dataLayer/Place.java	289	A method should have only one exit point, and that should be the last statement in the method
4515	src/pipe/common/dataLayer/Place.java	313	A method should have only one exit point, and that should be the last statement in the method
4516	src/pipe/common/dataLayer/Place.java	365	Avoid variables with short names like g
4517	src/pipe/common/dataLayer/Place.java	365	The method 'paintComponent' has a Cyclomatic Complexity of 12.
4518	src/pipe/common/dataLayer/Place.java	369	Avoid variables with short names like g2
4519	src/pipe/common/dataLayer/Place.java	373	Avoid variables with short names like x
4520	src/pipe/common/dataLayer/Place.java	373	Found 'DU'-anomaly for variable 'x' (lines '373'-'464').
4521	src/pipe/common/dataLayer/Place.java	374	Found 'DU'-anomaly for variable 'y' (lines '374'-'464').
4522	src/pipe/common/dataLayer/Place.java	432	Local variable 'marking' could be declared final
4523	src/pipe/common/dataLayer/Place.java	472	Avoid excessively long variable names like currentMarkingInput
4524	src/pipe/common/dataLayer/Place.java	474	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
4525	src/pipe/common/dataLayer/Place.java	485	Avoid excessively long variable names like initialMarkingInput
4526	src/pipe/common/dataLayer/Place.java	487	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
4527	src/pipe/common/dataLayer/PlaceTransitionObject.java	1	Package name contains upper case characters
4528	src/pipe/common/dataLayer/PlaceTransitionObject.java	3	Avoid unused imports such as 'java.awt.Color'
4529	src/pipe/common/dataLayer/PlaceTransitionObject.java	3	Avoid unused imports such as 'java.awt.Color'
4530	src/pipe/common/dataLayer/PlaceTransitionObject.java	5	Avoid unused imports such as 'java.awt.Graphics2D'
4531	src/pipe/common/dataLayer/PlaceTransitionObject.java	5	Avoid unused imports such as 'java.awt.Graphics2D'
4532	src/pipe/common/dataLayer/PlaceTransitionObject.java	6	Avoid unused imports such as 'java.awt.geom.Ellipse2D'
4533	src/pipe/common/dataLayer/PlaceTransitionObject.java	6	Avoid unused imports such as 'java.awt.geom.Ellipse2D'
4534	src/pipe/common/dataLayer/PlaceTransitionObject.java	13	Avoid unused imports such as 'pipe.gui.Constants'
4535	src/pipe/common/dataLayer/PlaceTransitionObject.java	13	Avoid unused imports such as 'pipe.gui.Constants'
4536	src/pipe/common/dataLayer/PlaceTransitionObject.java	36	Abstract classes should be named AbstractXXX
4537	src/pipe/common/dataLayer/PlaceTransitionObject.java	37	This class has too many methods, consider refactoring it.
4538	src/pipe/common/dataLayer/PlaceTransitionObject.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
4539	src/pipe/common/dataLayer/PlaceTransitionObject.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
4540	src/pipe/common/dataLayer/PlaceTransitionObject.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
4541	src/pipe/common/dataLayer/PlaceTransitionObject.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
4542	src/pipe/common/dataLayer/PlaceTransitionObject.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
4543	src/pipe/common/dataLayer/PlaceTransitionObject.java	67	Document empty constructor
4544	src/pipe/common/dataLayer/PlaceTransitionObject.java	67	It is a good practice to call super() in a constructor
4545	src/pipe/common/dataLayer/PlaceTransitionObject.java	83	It is a good practice to call super() in a constructor
4546	src/pipe/common/dataLayer/PlaceTransitionObject.java	88	Overridable method 'setPositionX' called during object construction
4547	src/pipe/common/dataLayer/PlaceTransitionObject.java	89	Overridable method 'setPositionY' called during object construction
4548	src/pipe/common/dataLayer/PlaceTransitionObject.java	134	Avoid unused constructor parameters such as 'nameOffsetXInput'.
4549	src/pipe/common/dataLayer/PlaceTransitionObject.java	134	Avoid unused constructor parameters such as 'nameOffsetYInput'.
4550	src/pipe/common/dataLayer/PlaceTransitionObject.java	142	Overridable method 'setName' called during object construction
4551	src/pipe/common/dataLayer/PlaceTransitionObject.java	168	Avoid variables with short names like o
4552	src/pipe/common/dataLayer/PlaceTransitionObject.java	224	clone() method should throw CloneNotSupportedException
4553	src/pipe/common/dataLayer/PlaceTransitionObject.java	264	Avoid if (x != y) ..; else ..;
4554	src/pipe/common/dataLayer/PlaceTransitionObject.java	266	A method should have only one exit point, and that should be the last statement in the method
4555	src/pipe/common/dataLayer/PlaceTransitionObject.java	338	Avoid variables with short names like g
4556	src/pipe/common/dataLayer/PlaceTransitionObject.java	338	Overriding method merely calls super
4557	src/pipe/common/dataLayer/PlaceTransitionObject.java	375	Avoid variables with short names like x
4558	src/pipe/common/dataLayer/PlaceTransitionObject.java	375	Avoid variables with short names like y
4559	src/pipe/common/dataLayer/PlaceTransitionObject.java	423	Avoid if (x != y) ..; else ..;
4560	src/pipe/common/dataLayer/PlaceTransitionObject.java	442	Avoid if (x != y) ..; else ..;
4561	src/pipe/common/dataLayer/PlaceTransitionObject.java	453	Avoid variables with short names like x
4562	src/pipe/common/dataLayer/PlaceTransitionObject.java	464	Found 'DD'-anomaly for variable 'scaleFactor' (lines '464'-'467').
4563	src/pipe/common/dataLayer/StateElement.java	1	Package name contains upper case characters
4564	src/pipe/common/dataLayer/StateElement.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
4565	src/pipe/common/dataLayer/StateElement.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
4566	src/pipe/common/dataLayer/StateElement.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
4567	src/pipe/common/dataLayer/StateElement.java	20	Parameter 'operator' is not assigned and could be declared final
4568	src/pipe/common/dataLayer/StateElement.java	20	Parameter 'placeA' is not assigned and could be declared final
4569	src/pipe/common/dataLayer/StateElement.java	20	Parameter 'placeB' is not assigned and could be declared final
4570	src/pipe/common/dataLayer/StateGroup.java	1	Package name contains upper case characters
4571	src/pipe/common/dataLayer/StateGroup.java	4	Avoid unused imports such as 'java.util.ArrayList'
4572	src/pipe/common/dataLayer/StateGroup.java	4	Avoid unused imports such as 'java.util.ArrayList'
4573	src/pipe/common/dataLayer/StateGroup.java	8	Avoid unused imports such as 'pipe.modules.passageTimeForTaggedNet.ConditionPlace'
4574	src/pipe/common/dataLayer/StateGroup.java	8	Avoid unused imports such as 'pipe.modules.passageTimeForTaggedNet.ConditionPlace'
4575	src/pipe/common/dataLayer/StateGroup.java	20	Avoid using implementation types like 'HashMap'; use the interface instead
4576	src/pipe/common/dataLayer/StateGroup.java	20	Avoid using implementation types like 'HashMap'; use the interface instead
4577	src/pipe/common/dataLayer/StateGroup.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
4578	src/pipe/common/dataLayer/StateGroup.java	21	Avoid variables with short names like id
4579	src/pipe/common/dataLayer/StateGroup.java	25	Avoid unused constructor parameters such as 'pnml'.
4580	src/pipe/common/dataLayer/StateGroup.java	25	Parameter 'pnml' is not assigned and could be declared final
4581	src/pipe/common/dataLayer/StateGroup.java	33	Avoid variables with short names like id
4582	src/pipe/common/dataLayer/StateGroup.java	33	Parameter 'id' is not assigned and could be declared final
4583	src/pipe/common/dataLayer/StateGroup.java	33	Parameter 'title' is not assigned and could be declared final
4584	src/pipe/common/dataLayer/StateGroup.java	48	Parameter 'newState' is not assigned and could be declared final
4585	src/pipe/common/dataLayer/StateGroup.java	50	Use equals() to compare strings instead of '==' or '!='
4586	src/pipe/common/dataLayer/StateGroup.java	50	Use equals() to compare strings instead of '==' or '!='
4587	src/pipe/common/dataLayer/StateGroup.java	52	Use equals() to compare strings instead of '==' or '!='
4588	src/pipe/common/dataLayer/StateGroup.java	64	Parameter 'operator' is not assigned and could be declared final
4589	src/pipe/common/dataLayer/StateGroup.java	69	Avoid variables with short names like id
4590	src/pipe/common/dataLayer/StateGroup.java	78	Avoid variables with short names like i
4591	src/pipe/common/dataLayer/StateGroup.java	78	Found 'DU'-anomaly for variable 'i' (lines '78'-'99').
4592	src/pipe/common/dataLayer/StateGroup.java	79	Found 'DD'-anomaly for variable 'conditions' (lines '79'-'88').
4593	src/pipe/common/dataLayer/StateGroup.java	79	Found 'DD'-anomaly for variable 'conditions' (lines '79'-'91').
4594	src/pipe/common/dataLayer/StateGroup.java	86	Use equals() to compare strings instead of '==' or '!='
4595	src/pipe/common/dataLayer/StateGroup.java	88	Found 'DD'-anomaly for variable 'conditions' (lines '88'-'88').
4596	src/pipe/common/dataLayer/StateGroup.java	88	Found 'DD'-anomaly for variable 'conditions' (lines '88'-'91').
4597	src/pipe/common/dataLayer/StateGroup.java	91	Found 'DD'-anomaly for variable 'conditions' (lines '91'-'88').
4598	src/pipe/common/dataLayer/StateGroup.java	91	Found 'DD'-anomaly for variable 'conditions' (lines '91'-'91').
4599	src/pipe/common/dataLayer/StateGroup.java	94	Found 'DU'-anomaly for variable 'i' (lines '94'-'99').
4600	src/pipe/common/dataLayer/StateGroup.java	116	Avoid variables with short names like id
4601	src/pipe/common/dataLayer/Token.java	1	Package name contains upper case characters
4602	src/pipe/common/dataLayer/Token.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
4603	src/pipe/common/dataLayer/Token.java	36	It is somewhat confusing to have a field name matching the declaring class name
4604	src/pipe/common/dataLayer/Token.java	43	Document empty constructor
4605	src/pipe/common/dataLayer/Token.java	43	It is a good practice to call super() in a constructor
4606	src/pipe/common/dataLayer/Token.java	64	Document empty method
4607	src/pipe/common/dataLayer/Token.java	102	Document empty method
4608	src/pipe/common/dataLayer/Token.java	118	Document empty method
4609	src/pipe/common/dataLayer/Token.java	128	Document empty method
4610	src/pipe/common/dataLayer/Token.java	132	Avoid variables with short names like e
4611	src/pipe/common/dataLayer/Token.java	133	Document empty method
4612	src/pipe/common/dataLayer/Transition.java	1	Package name contains upper case characters
4613	src/pipe/common/dataLayer/Transition.java	5	Avoid unused imports such as 'java.awt.Container'
4614	src/pipe/common/dataLayer/Transition.java	5	Avoid unused imports such as 'java.awt.Container'
4615	src/pipe/common/dataLayer/Transition.java	6	Avoid unused imports such as 'java.awt.Font'
4616	src/pipe/common/dataLayer/Transition.java	6	Avoid unused imports such as 'java.awt.Font'
4617	src/pipe/common/dataLayer/Transition.java	13	Avoid unused imports such as 'java.awt.geom.Ellipse2D'
4618	src/pipe/common/dataLayer/Transition.java	13	Avoid unused imports such as 'java.awt.geom.Ellipse2D'
4619	src/pipe/common/dataLayer/Transition.java	22	Avoid unused imports such as 'javax.swing.JPanel'
4620	src/pipe/common/dataLayer/Transition.java	22	Avoid unused imports such as 'javax.swing.JPanel'
4621	src/pipe/common/dataLayer/Transition.java	23	Avoid unused imports such as 'javax.swing.border.Border'
4622	src/pipe/common/dataLayer/Transition.java	23	Avoid unused imports such as 'javax.swing.border.Border'
4623	src/pipe/common/dataLayer/Transition.java	47	The class 'Transition' has a Cyclomatic Complexity of 3 (Highest = 16).
4624	src/pipe/common/dataLayer/Transition.java	48	This class has too many methods, consider refactoring it.
4625	src/pipe/common/dataLayer/Transition.java	54	Found non-transient, non-static member. Please mark as transient or provide accessors.
4626	src/pipe/common/dataLayer/Transition.java	54	Use explicit scoping instead of the default package private level
4627	src/pipe/common/dataLayer/Transition.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
4628	src/pipe/common/dataLayer/Transition.java	56	Found non-transient, non-static member. Please mark as transient or provide accessors.
4629	src/pipe/common/dataLayer/Transition.java	56	Use explicit scoping instead of the default package private level
4630	src/pipe/common/dataLayer/Transition.java	61	Overridable method 'calcAngle' called during object construction
4631	src/pipe/common/dataLayer/Transition.java	64	Use explicit scoping instead of the default package private level
4632	src/pipe/common/dataLayer/Transition.java	67	Avoid variables with short names like p1
4633	src/pipe/common/dataLayer/Transition.java	71	Avoid variables with short names like p2
4634	src/pipe/common/dataLayer/Transition.java	120	Variables that are final and static should be in all caps.
4635	src/pipe/common/dataLayer/Transition.java	125	Variables that are final and static should be in all caps.
4636	src/pipe/common/dataLayer/Transition.java	127	Avoid excessively long variable names like firingTaggedButton
4637	src/pipe/common/dataLayer/Transition.java	127	Avoid unused private fields such as 'firingTaggedButton'.
4638	src/pipe/common/dataLayer/Transition.java	130	Found non-transient, non-static member. Please mark as transient or provide accessors.
4639	src/pipe/common/dataLayer/Transition.java	130	It is somewhat confusing to have a field name matching the declaring class name
4640	src/pipe/common/dataLayer/Transition.java	131	Avoid excessively long variable names like proximityTransition
4641	src/pipe/common/dataLayer/Transition.java	131	Found non-transient, non-static member. Please mark as transient or provide accessors.
4642	src/pipe/common/dataLayer/Transition.java	135	Avoid excessively long variable names like taggedTokenEnabled
4643	src/pipe/common/dataLayer/Transition.java	141	Avoid excessively long variable names like firingTaggedVisible
4644	src/pipe/common/dataLayer/Transition.java	151	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
4645	src/pipe/common/dataLayer/Transition.java	156	Avoid using implementation types like 'ArrayList'; use the interface instead
4646	src/pipe/common/dataLayer/Transition.java	156	Avoid using implementation types like 'ArrayList'; use the interface instead
4647	src/pipe/common/dataLayer/Transition.java	162	Document empty constructor
4648	src/pipe/common/dataLayer/Transition.java	162	It is a good practice to call super() in a constructor
4649	src/pipe/common/dataLayer/Transition.java	205	Avoid really long parameter lists.
4650	src/pipe/common/dataLayer/Transition.java	224	Overridable method 'rotate' called during object construction
4651	src/pipe/common/dataLayer/Transition.java	261	Avoid variables with short names like x
4652	src/pipe/common/dataLayer/Transition.java	261	Avoid variables with short names like y
4653	src/pipe/common/dataLayer/Transition.java	269	Avoid if (x != y) ..; else ..;
4654	src/pipe/common/dataLayer/Transition.java	283	A method should have only one exit point, and that should be the last statement in the method
4655	src/pipe/common/dataLayer/Transition.java	293	A method should have only one exit point, and that should be the last statement in the method
4656	src/pipe/common/dataLayer/Transition.java	342	Avoid unnecessary comparisons in boolean expressions
4657	src/pipe/common/dataLayer/Transition.java	346	Avoid unnecessary comparisons in boolean expressions
4658	src/pipe/common/dataLayer/Transition.java	349	A method should have only one exit point, and that should be the last statement in the method
4659	src/pipe/common/dataLayer/Transition.java	354	A method should have only one exit point, and that should be the last statement in the method
4660	src/pipe/common/dataLayer/Transition.java	365	Avoid unnecessary comparisons in boolean expressions
4661	src/pipe/common/dataLayer/Transition.java	369	Avoid unnecessary comparisons in boolean expressions
4662	src/pipe/common/dataLayer/Transition.java	372	A method should have only one exit point, and that should be the last statement in the method
4663	src/pipe/common/dataLayer/Transition.java	420	This statement may have some unnecessary parentheses
4664	src/pipe/common/dataLayer/Transition.java	424	Avoid really long methods.
4665	src/pipe/common/dataLayer/Transition.java	424	Avoid variables with short names like g
4666	src/pipe/common/dataLayer/Transition.java	424	The method 'paintComponent' has a Cyclomatic Complexity of 16.
4667	src/pipe/common/dataLayer/Transition.java	424	The method paintComponent() has an NPath complexity of 672
4668	src/pipe/common/dataLayer/Transition.java	694	Avoid using if statements without curly braces
4669	src/pipe/common/dataLayer/Transition.java	695	Avoid using if statements without curly braces
4670	src/pipe/common/dataLayer/Transition.java	695	These nested if statements could be combined
4671	src/pipe/common/dataLayer/Transition.java	712	Avoid using if statements without curly braces
4672	src/pipe/common/dataLayer/Transition.java	713	These nested if statements could be combined
4673	src/pipe/common/dataLayer/Transition.java	715	Avoid using if...else statements without curly braces
4674	src/pipe/common/dataLayer/Transition.java	716	Avoid using if...else statements without curly braces
4675	src/pipe/common/dataLayer/Transition.java	730	Avoid using if statements without curly braces
4676	src/pipe/common/dataLayer/Transition.java	731	Avoid using if statements without curly braces
4677	src/pipe/common/dataLayer/Transition.java	731	These nested if statements could be combined
4678	src/pipe/common/dataLayer/Transition.java	746	Found 'DD'-anomaly for variable 'match' (lines '746'-'753').
4679	src/pipe/common/dataLayer/Transition.java	766	Avoid really long methods.
4680	src/pipe/common/dataLayer/Transition.java	766	The method 'updateEndPoints' has a Cyclomatic Complexity of 14.
4681	src/pipe/common/dataLayer/Transition.java	766	The method updateEndPoints() has an NPath complexity of 810
4682	src/pipe/common/dataLayer/Transition.java	768	Found 'DD'-anomaly for variable 'arcIterator' (lines '768'-'775').
4683	src/pipe/common/dataLayer/Transition.java	857	Found 'DD'-anomaly for variable 'current' (lines '857'-'885').
4684	src/pipe/common/dataLayer/Transition.java	861	Avoid instantiating new objects inside loops
4685	src/pipe/common/dataLayer/Transition.java	885	Found 'DU'-anomaly for variable 'current' (lines '885'-'904').
4686	src/pipe/common/dataLayer/Transition.java	890	Avoid instantiating new objects inside loops
4687	src/pipe/common/queryresult/FilePointsResultWrapper.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
4688	src/pipe/common/queryresult/FilePointsResultWrapper.java	24	Use explicit scoping instead of the default package private level
4689	src/pipe/common/queryresult/NodeAnalyserResultWrapper.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
4690	src/pipe/common/queryresult/NodeAnalyserResultWrapper.java	21	Use explicit scoping instead of the default package private level
4691	src/pipe/common/queryresult/PercentileResultWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4692	src/pipe/common/queryresult/PercentileResultWrapper.java	25	Use explicit scoping instead of the default package private level
4693	src/pipe/common/queryresult/PointsResultWrapper.java	7	Avoid unused imports such as 'java.io.FileNotFoundException'
4694	src/pipe/common/queryresult/PointsResultWrapper.java	7	Avoid unused imports such as 'java.io.FileNotFoundException'
4695	src/pipe/common/queryresult/PointsResultWrapper.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
4696	src/pipe/common/queryresult/ProbInIntervalResultWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4697	src/pipe/common/queryresult/ProbInIntervalResultWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4698	src/pipe/common/queryresult/ProbInIntervalResultWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4699	src/pipe/common/queryresult/ProbInIntervalResultWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4700	src/pipe/common/queryresult/ProbInIntervalResultWrapper.java	25	Use explicit scoping instead of the default package private level
4701	src/pipe/common/queryresult/QueryResultLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
4702	src/pipe/common/queryresult/QueryResultLoggingHandler.java	14	Avoid modifiers which are implied by the context
4703	src/pipe/common/queryresult/QueryResultLoggingHandler.java	14	Variables that are final and static should be in all caps.
4704	src/pipe/common/queryresult/QueryResultLoggingHandler.java	15	Avoid modifiers which are implied by the context
4705	src/pipe/common/queryresult/QueryResultLoggingHandler.java	15	Variables that are final and static should be in all caps.
4706	src/pipe/common/queryresult/ResultWrapper.java	16	Abstract classes should be named AbstractXXX
4707	src/pipe/common/queryresult/ResultWrapper.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
4708	src/pipe/common/queryresult/ResultWrapper.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
4709	src/pipe/common/queryresult/ResultWrapper.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
4710	src/pipe/common/queryresult/ResultWrapper.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
4711	src/pipe/common/queryresult/ResultWrapper.java	38	Avoid variables with short names like r
4712	src/pipe/common/queryresult/ResultWrapper.java	38	Found 'DD'-anomaly for variable 'r' (lines '38'-'41').
4713	src/pipe/common/queryresult/ResultWrapper.java	44	A method should have only one exit point, and that should be the last statement in the method
4714	src/pipe/common/queryresult/TextFileResultWrapper.java	26	The class 'TextFileResultWrapper' has a Cyclomatic Complexity of 3 (Highest = 10).
4715	src/pipe/common/queryresult/TextFileResultWrapper.java	35	Found 'DD'-anomaly for variable 'exceptionMsg' (lines '35'-'43').
4716	src/pipe/common/queryresult/TextFileResultWrapper.java	35	Found 'DU'-anomaly for variable 'exceptionMsg' (lines '35'-'47').
4717	src/pipe/common/queryresult/TextFileResultWrapper.java	40	Avoid using if statements without curly braces
4718	src/pipe/common/queryresult/TextFileResultWrapper.java	49	Avoid variables with short names like d
4719	src/pipe/common/queryresult/TextFileResultWrapper.java	54	Found non-transient, non-static member. Please mark as transient or provide accessors.
4720	src/pipe/common/queryresult/TextFileResultWrapper.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
4721	src/pipe/common/queryresult/TextFileResultWrapper.java	57	Found non-transient, non-static member. Please mark as transient or provide accessors.
4722	src/pipe/common/queryresult/TextFileResultWrapper.java	57	No need to call String.valueOf to append to a string.
4723	src/pipe/common/queryresult/TextFileResultWrapper.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
4724	src/pipe/common/queryresult/TextFileResultWrapper.java	69	Assigning an Object to null is a code smell. Consider refactoring.
4725	src/pipe/common/queryresult/TextFileResultWrapper.java	75	Assigning an Object to null is a code smell. Consider refactoring.
4726	src/pipe/common/queryresult/TextFileResultWrapper.java	76	Assigning an Object to null is a code smell. Consider refactoring.
4727	src/pipe/common/queryresult/TextFileResultWrapper.java	84	Overridable method 'getFileText' called during object construction
4728	src/pipe/common/queryresult/TextFileResultWrapper.java	86	Assigning an Object to null is a code smell. Consider refactoring.
4729	src/pipe/common/queryresult/TextFileResultWrapper.java	95	Overridable method 'getFileText' called during object construction
4730	src/pipe/common/queryresult/TextFileResultWrapper.java	102	Avoid variables with short names like f
4731	src/pipe/common/queryresult/TextFileResultWrapper.java	104	Avoid variables with short names like s
4732	src/pipe/common/queryresult/TextFileResultWrapper.java	105	Avoid variables with short names like r
4733	src/pipe/common/queryresult/TextFileResultWrapper.java	105	Found 'DD'-anomaly for variable 'r' (lines '105'-'108').
4734	src/pipe/common/queryresult/TextFileResultWrapper.java	110	Avoid assignments in operands
4735	src/pipe/common/queryresult/TextFileResultWrapper.java	110	Found 'DU'-anomaly for variable 'line' (lines '110'-'131').
4736	src/pipe/common/queryresult/TextFileResultWrapper.java	135	Avoid variables with short names like p
4737	src/pipe/common/queryresult/TextFileResultWrapper.java	143	Avoid instantiating new objects inside loops
4738	src/pipe/common/queryresult/TextFileResultWrapper.java	151	Found 'DD'-anomaly for variable 'rest' (lines '151'-'153').
4739	src/pipe/common/queryresult/TextFileResultWrapper.java	190	A switch statement does not contain a break
4740	src/pipe/common/queryresult/TextFileResultWrapper.java	193	A method should have only one exit point, and that should be the last statement in the method
4741	src/pipe/common/queryresult/TextFileResultWrapper.java	198	A method should have only one exit point, and that should be the last statement in the method
4742	src/pipe/common/queryresult/TextFileResultWrapper.java	200	A method should have only one exit point, and that should be the last statement in the method
4743	src/pipe/common/queryresult/TextFileResultWrapper.java	202	A method should have only one exit point, and that should be the last statement in the method
4744	src/pipe/common/queryresult/TextFileResultWrapper.java	229	The method 'getValues' has a Cyclomatic Complexity of 10.
4745	src/pipe/common/queryresult/TextFileResultWrapper.java	231	Found 'DU'-anomaly for variable 'data' (lines '231'-'273').
4746	src/pipe/common/queryresult/TextFileResultWrapper.java	236	Avoid using final local variables, turn them into fields
4747	src/pipe/common/queryresult/TextFileResultWrapper.java	240	Found 'DU'-anomaly for variable 'p2' (lines '240'-'273').
4748	src/pipe/common/queryresult/TextFileResultWrapper.java	242	Found 'DD'-anomaly for variable 'i' (lines '242'-'264').
4749	src/pipe/common/queryresult/TextFileResultWrapper.java	242	Found 'DU'-anomaly for variable 'i' (lines '242'-'273').
4750	src/pipe/common/queryresult/TextFileResultWrapper.java	252	Avoid instantiating new objects inside loops
4751	src/pipe/common/queryresult/TextFileResultWrapper.java	255	Found 'DU'-anomaly for variable 'y' (lines '255'-'273').
4752	src/pipe/common/queryresult/TextFileResultWrapper.java	257	Deeply nested if..then statements are hard to read
4753	src/pipe/common/queryresult/TextFileResultWrapper.java	262	Avoid instantiating new objects inside loops
4754	src/pipe/common/queryresult/TextFileResultWrapper.java	264	Found 'DD'-anomaly for variable 'i' (lines '264'-'264').
4755	src/pipe/common/queryresult/TextFileResultWrapper.java	264	Found 'DU'-anomaly for variable 'i' (lines '264'-'273').
4756	src/pipe/common/queryresult/TextFileResultWrapper.java	279	Avoid using final local variables, turn them into fields
4757	src/pipe/common/queryresult/TextFileResultWrapper.java	284	Found 'DU'-anomaly for variable 'replacement' (lines '284'-'318').
4758	src/pipe/common/queryresult/TextFileResultWrapper.java	286	Found 'DD'-anomaly for variable 'i' (lines '286'-'310').
4759	src/pipe/common/queryresult/TextFileResultWrapper.java	286	Found 'DU'-anomaly for variable 'i' (lines '286'-'318').
4760	src/pipe/common/queryresult/TextFileResultWrapper.java	294	Avoid instantiating new objects inside loops
4761	src/pipe/common/queryresult/TextFileResultWrapper.java	297	Found 'DD'-anomaly for variable 'y' (lines '297'-'300').
4762	src/pipe/common/queryresult/TextFileResultWrapper.java	300	Avoid if (x != y) ..; else ..;
4763	src/pipe/common/queryresult/TextFileResultWrapper.java	309	No need to call String.valueOf to append to a string.
4764	src/pipe/common/queryresult/TextFileResultWrapper.java	309	No need to call String.valueOf to append to a string.
4765	src/pipe/common/queryresult/TextFileResultWrapper.java	310	Found 'DD'-anomaly for variable 'i' (lines '310'-'310').
4766	src/pipe/common/queryresult/TextFileResultWrapper.java	310	Found 'DU'-anomaly for variable 'i' (lines '310'-'318').
4767	src/pipe/common/queryresult/XYCoordinate.java	28	Variables that are final and static should be in all caps.
4768	src/pipe/common/queryresult/XYCoordinate.java	30	Avoid variables with short names like x
4769	src/pipe/common/queryresult/XYCoordinate.java	30	Avoid variables with short names like y
4770	src/pipe/common/queryresult/XYCoordinate.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
4771	src/pipe/common/queryresult/XYCoordinate.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
4772	src/pipe/common/queryresult/XYCoordinate.java	32	Avoid variables with short names like x
4773	src/pipe/common/queryresult/XYCoordinate.java	32	Avoid variables with short names like y
4774	src/pipe/common/queryresult/XYCoordinates.java	19	This class has too many methods, consider refactoring it.
4775	src/pipe/common/queryresult/XYCoordinates.java	24	Avoid using implementation types like 'ArrayList'; use the interface instead
4776	src/pipe/common/queryresult/XYCoordinates.java	24	Avoid using implementation types like 'ArrayList'; use the interface instead
4777	src/pipe/common/queryresult/XYCoordinates.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
4778	src/pipe/common/queryresult/XYCoordinates.java	25	Avoid using implementation types like 'ArrayList'; use the interface instead
4779	src/pipe/common/queryresult/XYCoordinates.java	25	Avoid using implementation types like 'ArrayList'; use the interface instead
4780	src/pipe/common/queryresult/XYCoordinates.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4781	src/pipe/common/queryresult/XYCoordinates.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
4782	src/pipe/common/queryresult/XYCoordinates.java	46	Avoid variables with short names like x
4783	src/pipe/common/queryresult/XYCoordinates.java	51	Avoid variables with short names like y
4784	src/pipe/common/queryresult/XYCoordinates.java	124	Avoid variables with short names like x
4785	src/pipe/common/queryresult/XYCoordinates.java	130	Avoid variables with short names like y
4786	src/pipe/common/queryresult/XYCoordinatesTest.java	20	Avoid variables with short names like b
4787	src/pipe/common/queryresult/XYCoordinatesTest.java	32	JUnit 4 tests that execute tests should use the @Test annotation
4788	src/pipe/common/queryresult/XYCoordinatesTest.java	34	Avoid variables with short names like cs
4789	src/pipe/common/queryresult/XYCoordinatesTest.java	45	Avoid variables with short names like c
4790	src/pipe/common/queryresult/XYCoordinatesTest.java	58	JUnit 4 tests that execute tests should use the @Test annotation
4791	src/pipe/common/queryresult/XYCoordinatesTest.java	60	Avoid variables with short names like cs
4792	src/pipe/common/queryresult/XYCoordinatesTest.java	71	Avoid variables with short names like c
4793	src/pipe/dataLayer/calculations/CompressedState.java	4	Package name contains upper case characters
4794	src/pipe/dataLayer/calculations/CompressedState.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
4795	src/pipe/dataLayer/calculations/CompressedState.java	15	Private field 'hashCode2' could be made final; it is only initialized in the declaration or constructor.
4796	src/pipe/dataLayer/calculations/CompressedState.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
4797	src/pipe/dataLayer/calculations/CompressedState.java	16	Private field 'idnum' could be made final; it is only initialized in the declaration or constructor.
4798	src/pipe/dataLayer/calculations/CompressedState.java	18	Avoid variables with short names like hc
4799	src/pipe/dataLayer/calculations/CompressedState.java	18	Avoid variables with short names like id
4800	src/pipe/dataLayer/calculations/CompressedState.java	18	Parameter 'hc' is not assigned and could be declared final
4801	src/pipe/dataLayer/calculations/CompressedState.java	18	Parameter 'id' is not assigned and could be declared final
4802	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	1	Package name contains upper case characters
4803	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	23	Avoid excessively long variable names like DynamicMarkingImplFile
4804	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
4805	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	23	Private field 'DynamicMarkingImplFile' could be made final; it is only initialized in the declaration or constructor.
4806	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	23	Variables should start with a lowercase character
4807	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4808	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	25	Private field 'buildFolder' could be made final; it is only initialized in the declaration or constructor.
4809	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
4810	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	27	Private field 'templateFile' could be made final; it is only initialized in the declaration or constructor.
4811	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
4812	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	29	Perhaps 'templateFolder' could be replaced by a local variable.
4813	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	29	Private field 'templateFolder' could be made final; it is only initialized in the declaration or constructor.
4814	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	40	Avoid variables with short names like sb
4815	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	40	Local variable 'sb' could be declared final
4816	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	56	This statement may have some unnecessary parentheses
4817	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	57	This statement may have some unnecessary parentheses
4818	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	58	This statement may have some unnecessary parentheses
4819	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	59	This statement may have some unnecessary parentheses
4820	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	67	Avoid unused local variables such as 'errorCode'.
4821	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	67	Found 'DU'-anomaly for variable 'errorCode' (lines '67'-'72').
4822	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	67	Local variable 'errorCode' could be declared final
4823	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	85	Local variable 'classesDir' could be declared final
4824	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	88	In J2EE, getClassLoader() might not work as expected. Use Thread.currentThread().getContextClassLoader() instead.
4825	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	88	Local variable 'parentLoader' could be declared final
4826	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	92	Local variable 'loader1' could be declared final
4827	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	96	Consider simply returning the value vs storing it in local variable 'dynMark'
4828	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	106	Parameter 'startExp' is not assigned and could be declared final
4829	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	106	Parameter 'targetExp' is not assigned and could be declared final
4830	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	108	Found 'DU'-anomaly for variable 'fullStartExp' (lines '108'-'150').
4831	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	109	Found 'DU'-anomaly for variable 'fullTargetExp' (lines '109'-'150').
4832	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	113	Found 'DD'-anomaly for variable 'dynMFile' (lines '113'-'116').
4833	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	114	Found 'DD'-anomaly for variable 'tempFile' (lines '114'-'117').
4834	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	121	Avoid printStackTrace(); use a logger call instead.
4835	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	126	Found 'DD'-anomaly for variable 'input' (lines '126'-'128').
4836	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	128	Avoid assignments in operands
4837	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	128	Found 'DU'-anomaly for variable 'input' (lines '128'-'150').
4838	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	129	Position literals first in String comparisons
4839	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	134	Position literals first in String comparisons
4840	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	148	Avoid printStackTrace(); use a logger call instead.
4841	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	156	Parameter 'logicalExp' is not assigned and could be declared final
4842	src/pipe/dataLayer/calculations/DynamicMarkingCompiler.java	157	Avoid variables with short names like sb
4843	src/pipe/dataLayer/calculations/EnterOptionsException.java	1	Package name contains upper case characters
4844	src/pipe/dataLayer/calculations/EnterOptionsException.java	4	Avoid unnecessary constructors - the compiler will generate these for you
4845	src/pipe/dataLayer/calculations/LTIMapRed.java	1	A high number of imports can indicate a high degree of coupling within an object.
4846	src/pipe/dataLayer/calculations/LTIMapRed.java	1	Package name contains upper case characters
4847	src/pipe/dataLayer/calculations/LTIMapRed.java	49	The class 'LTIMapRed' has a Cyclomatic Complexity of 8 (Highest = 14).
4848	src/pipe/dataLayer/calculations/LTIMapRed.java	49	This class has too many methods, consider refactoring it.
4849	src/pipe/dataLayer/calculations/LTIMapRed.java	75	Local variable 'fileSeparator' could be declared final
4850	src/pipe/dataLayer/calculations/LTIMapRed.java	76	Avoid variables with short names like sb
4851	src/pipe/dataLayer/calculations/LTIMapRed.java	76	Local variable 'sb' could be declared final
4852	src/pipe/dataLayer/calculations/LTIMapRed.java	93	The class 'RTAMapper' has a Cyclomatic Complexity of 4 (Highest = 11).
4853	src/pipe/dataLayer/calculations/LTIMapRed.java	94	Found non-transient, non-static member. Please mark as transient or provide accessors.
4854	src/pipe/dataLayer/calculations/LTIMapRed.java	94	Private field 'fnm' could be made final; it is only initialized in the declaration or constructor.
4855	src/pipe/dataLayer/calculations/LTIMapRed.java	99	It is a good practice to call super() in a constructor
4856	src/pipe/dataLayer/calculations/LTIMapRed.java	101	Avoid instantiating String objects; this is usually unnecessary.
4857	src/pipe/dataLayer/calculations/LTIMapRed.java	102	System.out.print is used
4858	src/pipe/dataLayer/calculations/LTIMapRed.java	110	Parameter 'job' is not assigned and could be declared final
4859	src/pipe/dataLayer/calculations/LTIMapRed.java	119	Avoid catching NullPointerException; consider removing the cause of the NPE.
4860	src/pipe/dataLayer/calculations/LTIMapRed.java	123	System.out.print is used
4861	src/pipe/dataLayer/calculations/LTIMapRed.java	124	Avoid printStackTrace(); use a logger call instead.
4862	src/pipe/dataLayer/calculations/LTIMapRed.java	132	Avoid printStackTrace(); use a logger call instead.
4863	src/pipe/dataLayer/calculations/LTIMapRed.java	138	Avoid printStackTrace(); use a logger call instead.
4864	src/pipe/dataLayer/calculations/LTIMapRed.java	151	Parameter 'key' is not assigned and could be declared final
4865	src/pipe/dataLayer/calculations/LTIMapRed.java	151	Parameter 'out' is not assigned and could be declared final
4866	src/pipe/dataLayer/calculations/LTIMapRed.java	151	Parameter 'reporter' is not assigned and could be declared final
4867	src/pipe/dataLayer/calculations/LTIMapRed.java	151	Parameter 'val' is not assigned and could be declared final
4868	src/pipe/dataLayer/calculations/LTIMapRed.java	157	Avoid variables with short names like S
4869	src/pipe/dataLayer/calculations/LTIMapRed.java	157	Local variable 'S' could be declared final
4870	src/pipe/dataLayer/calculations/LTIMapRed.java	160	Found 'DU'-anomaly for variable 'rtaRes' (lines '160'-'176').
4871	src/pipe/dataLayer/calculations/LTIMapRed.java	161	Found 'DU'-anomaly for variable 'cdfRes' (lines '161'-'176').
4872	src/pipe/dataLayer/calculations/LTIMapRed.java	164	Avoid printStackTrace(); use a logger call instead.
4873	src/pipe/dataLayer/calculations/LTIMapRed.java	166	New exception is thrown in catch block, original stack trace may be lost
4874	src/pipe/dataLayer/calculations/LTIMapRed.java	181	Document empty method
4875	src/pipe/dataLayer/calculations/LTIMapRed.java	188	The method 'reconstructMatrix' has a Cyclomatic Complexity of 11.
4876	src/pipe/dataLayer/calculations/LTIMapRed.java	188	The method reconstructMatrix() has an NPath complexity of 768
4877	src/pipe/dataLayer/calculations/LTIMapRed.java	190	Local variable 'fileSys' could be declared final
4878	src/pipe/dataLayer/calculations/LTIMapRed.java	200	Avoid variables with short names like in
4879	src/pipe/dataLayer/calculations/LTIMapRed.java	200	Local variable 'in' could be declared final
4880	src/pipe/dataLayer/calculations/LTIMapRed.java	208	Avoid instantiating new objects inside loops
4881	src/pipe/dataLayer/calculations/LTIMapRed.java	238	Avoid instantiating new objects inside loops
4882	src/pipe/dataLayer/calculations/LTIMapRed.java	239	Avoid instantiating new objects inside loops
4883	src/pipe/dataLayer/calculations/LTIMapRed.java	280	Found non-transient, non-static member. Please mark as transient or provide accessors.
4884	src/pipe/dataLayer/calculations/LTIMapRed.java	280	Found non-transient, non-static member. Please mark as transient or provide accessors.
4885	src/pipe/dataLayer/calculations/LTIMapRed.java	280	Use explicit scoping instead of the default package private level
4886	src/pipe/dataLayer/calculations/LTIMapRed.java	281	Avoid variables with short names like S
4887	src/pipe/dataLayer/calculations/LTIMapRed.java	281	Found non-transient, non-static member. Please mark as transient or provide accessors.
4888	src/pipe/dataLayer/calculations/LTIMapRed.java	281	The field name indicates a constant but its modifiers do not
4889	src/pipe/dataLayer/calculations/LTIMapRed.java	281	Use explicit scoping instead of the default package private level
4890	src/pipe/dataLayer/calculations/LTIMapRed.java	281	Variables should start with a lowercase character
4891	src/pipe/dataLayer/calculations/LTIMapRed.java	283	Found non-transient, non-static member. Please mark as transient or provide accessors.
4892	src/pipe/dataLayer/calculations/LTIMapRed.java	283	Use explicit scoping instead of the default package private level
4893	src/pipe/dataLayer/calculations/LTIMapRed.java	322	Avoid really long methods.
4894	src/pipe/dataLayer/calculations/LTIMapRed.java	322	The method 'launch' has a Cyclomatic Complexity of 10.
4895	src/pipe/dataLayer/calculations/LTIMapRed.java	329	System.out.print is used
4896	src/pipe/dataLayer/calculations/LTIMapRed.java	330	Found 'DU'-anomaly for variable 'timeBefore' (lines '330'-'454').
4897	src/pipe/dataLayer/calculations/LTIMapRed.java	333	Found 'DD'-anomaly for variable 'jobJar' (lines '333'-'334').
4898	src/pipe/dataLayer/calculations/LTIMapRed.java	335	System.out.print is used
4899	src/pipe/dataLayer/calculations/LTIMapRed.java	381	Avoid unused local variables such as 'numRecords'.
4900	src/pipe/dataLayer/calculations/LTIMapRed.java	381	Found 'DU'-anomaly for variable 'numRecords' (lines '381'-'454').
4901	src/pipe/dataLayer/calculations/LTIMapRed.java	394	System.out.print is used
4902	src/pipe/dataLayer/calculations/LTIMapRed.java	439	Avoid variables with short names like rt
4903	src/pipe/dataLayer/calculations/LTIMapRed.java	444	Found 'DD'-anomaly for variable 'line' (lines '444'-'446').
4904	src/pipe/dataLayer/calculations/LTIMapRed.java	446	Avoid assignments in operands
4905	src/pipe/dataLayer/calculations/LTIMapRed.java	446	Avoid using while statements without curly braces
4906	src/pipe/dataLayer/calculations/LTIMapRed.java	446	Found 'DU'-anomaly for variable 'line' (lines '446'-'454').
4907	src/pipe/dataLayer/calculations/LTIMapRed.java	449	Avoid unused local variables such as 'exitVal'.
4908	src/pipe/dataLayer/calculations/LTIMapRed.java	449	Found 'DU'-anomaly for variable 'exitVal' (lines '449'-'454').
4909	src/pipe/dataLayer/calculations/LTIMapRed.java	466	The method 'calculateSum' has a Cyclomatic Complexity of 11.
4910	src/pipe/dataLayer/calculations/LTIMapRed.java	466	The method calculateSum() has an NPath complexity of 4840
4911	src/pipe/dataLayer/calculations/LTIMapRed.java	471	Avoid using if statements without curly braces
4912	src/pipe/dataLayer/calculations/LTIMapRed.java	475	Avoid using if statements without curly braces
4913	src/pipe/dataLayer/calculations/LTIMapRed.java	479	Avoid if (x != y) ..; else ..;
4914	src/pipe/dataLayer/calculations/LTIMapRed.java	484	Avoid if (x != y) ..; else ..;
4915	src/pipe/dataLayer/calculations/LTIMapRed.java	484	Avoid instantiating new objects inside loops
4916	src/pipe/dataLayer/calculations/LTIMapRed.java	484	Avoid instantiating new objects inside loops
4917	src/pipe/dataLayer/calculations/LTIMapRed.java	484	Found 'DD'-anomaly for variable 'term' (lines '484'-'487').
4918	src/pipe/dataLayer/calculations/LTIMapRed.java	486	Avoid using if statements without curly braces
4919	src/pipe/dataLayer/calculations/LTIMapRed.java	496	Avoid if (x != y) ..; else ..;
4920	src/pipe/dataLayer/calculations/LTIMapRed.java	496	Found 'DD'-anomaly for variable 'term' (lines '496'-'508').
4921	src/pipe/dataLayer/calculations/LTIMapRed.java	507	Avoid using if statements without curly braces
4922	src/pipe/dataLayer/calculations/LTIMapRed.java	512	Found 'DU'-anomaly for variable 'avgsu' (lines '512'-'523').
4923	src/pipe/dataLayer/calculations/LTIMapRed.java	539	The method createSValues() has an NPath complexity of 532
4924	src/pipe/dataLayer/calculations/LTIMapRed.java	543	Avoid instantiating String objects; this is usually unnecessary.
4925	src/pipe/dataLayer/calculations/LTIMapRed.java	543	Found 'DU'-anomaly for variable 'baseFilename' (lines '543'-'621').
4926	src/pipe/dataLayer/calculations/LTIMapRed.java	544	Found 'DU'-anomaly for variable 'NameFormatter' (lines '544'-'621').
4927	src/pipe/dataLayer/calculations/LTIMapRed.java	585	Avoid using if statements without curly braces
4928	src/pipe/dataLayer/calculations/LTIMapRed.java	586	Found 'DD'-anomaly for variable 'mapsPerSplit' (lines '586'-'604').
4929	src/pipe/dataLayer/calculations/LTIMapRed.java	586	Found 'DU'-anomaly for variable 'mapsPerSplit' (lines '586'-'621').
4930	src/pipe/dataLayer/calculations/LTIMapRed.java	590	Found 'DU'-anomaly for variable 'svals' (lines '590'-'621').
4931	src/pipe/dataLayer/calculations/LTIMapRed.java	594	Found 'DU'-anomaly for variable 'record' (lines '594'-'621').
4932	src/pipe/dataLayer/calculations/LTIMapRed.java	601	Found 'DD'-anomaly for variable 'numCopiedSoFar' (lines '601'-'601').
4933	src/pipe/dataLayer/calculations/LTIMapRed.java	601	Found 'DU'-anomaly for variable 'numCopiedSoFar' (lines '601'-'621').
4934	src/pipe/dataLayer/calculations/LTIMapRed.java	613	Found 'DU'-anomaly for variable 'record' (lines '613'-'621').
4935	src/pipe/dataLayer/calculations/LTIMapRed.java	630	The method saveMatrix() has an NPath complexity of 384
4936	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid really long parameter lists.
4937	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'ArrayList'; use the interface instead
4938	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'ArrayList'; use the interface instead
4939	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'ArrayList'; use the interface instead
4940	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'ArrayList'; use the interface instead
4941	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'HashMap'; use the interface instead
4942	src/pipe/dataLayer/calculations/LTIMapRed.java	705	Avoid using implementation types like 'HashMap'; use the interface instead
4943	src/pipe/dataLayer/calculations/LTIMapRed.java	706	The user-supplied array 'MatrixQTorV' is stored directly.
4944	src/pipe/dataLayer/calculations/LTIMapRed.java	706	The user-supplied array 'MatrixQdata' is stored directly.
4945	src/pipe/dataLayer/calculations/LTIMapRed.java	706	The user-supplied array 'MatrixQind' is stored directly.
4946	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	1	Package name contains upper case characters
4947	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	17	The class 'LaplaceTransformInverter' has a Cyclomatic Complexity of 6 (Highest = 15).
4948	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	17	Too many fields
4949	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	19	Use explicit scoping instead of the default package private level
4950	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	21	Avoid variables with short names like SU
4951	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
4952	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	22	Avoid variables with short names like C
4953	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
4954	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	24	Avoid variables with short names like A
4955	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
4956	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	24	This final field could be made static
4957	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
4958	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	25	This final field could be made static
4959	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	Avoid variables with short names like H
4960	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	Avoid variables with short names like U
4961	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
4962	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	The field name indicates a constant but its modifiers do not
4963	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	Use explicit scoping instead of the default package private level
4964	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	27	Variables should start with a lowercase character
4965	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
4966	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
4967	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
4968	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
4969	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	33	Avoid using implementation types like 'HashMap'; use the interface instead
4970	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	33	Avoid using implementation types like 'HashMap'; use the interface instead
4971	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	35	Variables should start with a lowercase character
4972	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	36	Variables should start with a lowercase character
4973	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	37	Variables should start with a lowercase character
4974	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	38	Variables should start with a lowercase character
4975	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	55	Use explicit scoping instead of the default package private level
4976	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	64	Parameter 'S' is not assigned and could be declared final
4977	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	64	The method 'fnRf' has a Cyclomatic Complexity of 12.
4978	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	66	Found 'DD'-anomaly for variable 'Aqii' (lines '66'-'95').
4979	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	72	Found 'DU'-anomaly for variable 'iterations' (lines '72'-'136').
4980	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	77	Local variable 'BSize' could be declared final
4981	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	82	Avoid instantiating new objects inside loops
4982	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	83	Found 'DD'-anomaly for variable 'kB' (lines '83'-'76').
4983	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	83	Found 'DU'-anomaly for variable 'kB' (lines '83'-'136').
4984	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	86	Avoid instantiating new objects inside loops
4985	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	86	Avoid using if...else statements without curly braces
4986	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	89	Local variable 'size' could be declared final
4987	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	93	Local variable 'temp' could be declared final
4988	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	94	Avoid if (x != y) ..; else ..;
4989	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	95	Avoid using if...else statements without curly braces
4990	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	95	Found 'DD'-anomaly for variable 'Aqii' (lines '95'-'95').
4991	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	95	Found 'DD'-anomaly for variable 'Aqii' (lines '95'-'97').
4992	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	97	Avoid instantiating new objects inside loops
4993	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	97	Avoid using if...else statements without curly braces
4994	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	97	Found 'DD'-anomaly for variable 'Aqii' (lines '97'-'95').
4995	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	97	Found 'DD'-anomaly for variable 'Aqii' (lines '97'-'97').
4996	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	101	Avoid instantiating new objects inside loops
4997	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	101	Local variable 'Aq' could be declared final
4998	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	114	Avoid instantiating new objects inside loops
4999	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	114	Local variable 'result' could be declared final
5000	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	116	Found 'DU'-anomaly for variable 'i' (lines '116'-'136').
5001	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	124	A method should have only one exit point, and that should be the last statement in the method
5002	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	124	Avoid using if...else statements without curly braces
5003	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	126	Avoid using if...else statements without curly braces
5004	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	130	System.out.print is used
5005	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	144	Found 'DD'-anomaly for variable 'sub' (lines '144'-'146').
5006	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	144	Found 'DU'-anomaly for variable 'sub' (lines '144'-'155').
5007	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	146	Avoid assignments in operands
5008	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	146	Found 'DD'-anomaly for variable 'sub' (lines '146'-'149').
5009	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	149	Avoid assignments in operands
5010	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	149	Avoid using if statements without curly braces
5011	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	149	Found 'DD'-anomaly for variable 'sub' (lines '149'-'146').
5012	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	149	Found 'DU'-anomaly for variable 'sub' (lines '149'-'155').
5013	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	160	Avoid unused private methods such as 'printarray()'.
5014	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	163	System.out.print is used
5015	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	165	System.out.print is used
5016	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	176	Parameter 'T' is not assigned and could be declared final
5017	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	176	Parameter 'calcRTA' is not assigned and could be declared final
5018	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	224	Parameter 'T' is not assigned and could be declared final
5019	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	224	Parameter 'calcRTA' is not assigned and could be declared final
5020	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	227	Avoid using if statements without curly braces
5021	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	233	Found 'DD'-anomaly for variable 'term' (lines '233'-'235').
5022	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	234	Avoid using if statements without curly braces
5023	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	244	Found 'DD'-anomaly for variable 'term' (lines '244'-'255').
5024	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	254	Avoid using if statements without curly braces
5025	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	259	Found 'DU'-anomaly for variable 'avgsu' (lines '259'-'269').
5026	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	268	Consider simply returning the value vs storing it in local variable 'fun1'
5027	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	276	The method 'createMatrix' has a Cyclomatic Complexity of 15.
5028	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	276	The method createMatrix() has an NPath complexity of 432
5029	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	279	Found 'DD'-anomaly for variable 'SZMBdata' (lines '279'-'296').
5030	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	279	Found 'DD'-anomaly for variable 'rowNZ' (lines '279'-'292').
5031	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	280	Found 'DD'-anomaly for variable 'iCntA' (lines '280'-'317').
5032	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	280	Found 'DU'-anomaly for variable 'iCntB' (lines '280'-'356').
5033	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	280	Found 'DU'-anomaly for variable 'sCntB' (lines '280'-'356').
5034	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	292	Found 'DD'-anomaly for variable 'rowNZ' (lines '292'-'300').
5035	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	294	Found 'DD'-anomaly for variable 'isTgt' (lines '294'-'297').
5036	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	296	Found 'DD'-anomaly for variable 'SZMBdata' (lines '296'-'296').
5037	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	300	Found 'DD'-anomaly for variable 'rowNZ' (lines '300'-'300').
5038	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	317	Found 'DU'-anomaly for variable 'iCntA' (lines '317'-'356').
5039	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	319	Found 'DD'-anomaly for variable 'isTgt' (lines '319'-'323').
5040	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	364	Avoid unused private methods such as 'isTgtState(int)'.
5041	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	374	Avoid unused local variables such as 'k'.
5042	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	374	Found 'DD'-anomaly for variable 'k' (lines '374'-'374').
5043	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	374	Found 'DU'-anomaly for variable 'k' (lines '374'-'403').
5044	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	379	Found 'DD'-anomaly for variable 'printed' (lines '379'-'386').
5045	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	385	System.out.print is used
5046	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	391	Avoid unnecessary comparisons in boolean expressions
5047	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	391	Avoid using if statements without curly braces
5048	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	392	System.out.print is used
5049	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	397	Found 'DU'-anomaly for variable 'kB' (lines '397'-'403').
5050	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	416	Found 'DU'-anomaly for variable 'sum' (lines '416'-'428').
5051	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	421	Found 'DU'-anomaly for variable 'i' (lines '421'-'428').
5052	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	450	Avoid really long parameter lists.
5053	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	450	Avoid using implementation types like 'ArrayList'; use the interface instead
5054	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	450	Avoid using implementation types like 'ArrayList'; use the interface instead
5055	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	450	Avoid using implementation types like 'ArrayList'; use the interface instead
5056	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	450	Avoid using implementation types like 'ArrayList'; use the interface instead
5057	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	451	The user-supplied array 'MatrixQTorV' is stored directly.
5058	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	451	The user-supplied array 'MatrixQdata' is stored directly.
5059	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	451	The user-supplied array 'MatrixQind' is stored directly.
5060	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	470	Avoid using for statements without curly braces
5061	src/pipe/dataLayer/calculations/LaplaceTransformInverter.java	475	Avoid using for statements without curly braces
5062	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	1	Package name contains upper case characters
5063	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	30	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
5064	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	30	The class 'LargeStateSpaceGen' has a Cyclomatic Complexity of 6 (Highest = 18).
5065	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	30	This class has too many methods, consider refactoring it.
5066	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	33	It is somewhat confusing to have a field name with the same name as a method
5067	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	44	Avoid really long methods.
5068	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	44	Parameter 'pnmlData' is not assigned and could be declared final
5069	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	44	Parameter 'reachGraph' is not assigned and could be declared final
5070	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	44	The method 'generate' has a Cyclomatic Complexity of 14.
5071	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	44	The method generate() has an NPath complexity of 1080
5072	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	46	Found 'DU'-anomaly for variable 'statesToExplore' (lines '46'-'177').
5073	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	46	Local variable 'statesToExplore' could be declared final
5074	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	48	Found 'DU'-anomaly for variable 'numStates' (lines '48'-'177').
5075	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	48	Found 'DU'-anomaly for variable 'numTransFired' (lines '48'-'177').
5076	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	48	Found 'DU'-anomaly for variable 'numTransitions' (lines '48'-'177').
5077	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	48	Found 'DU'-anomaly for variable 'stateNo' (lines '48'-'177').
5078	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	48	Local variable 'stateNo' could be declared final
5079	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	56	Found 'DU'-anomaly for variable 'exploredStates' (lines '56'-'177').
5080	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	56	Local variable 'exploredStates' could be declared final
5081	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	59	Found 'DU'-anomaly for variable 'localarcs' (lines '59'-'177').
5082	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	61	Found 'DU'-anomaly for variable 'successorStates' (lines '61'-'177').
5083	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	70	Avoid variables with short names like sb
5084	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	70	Local variable 'sb' could be declared final
5085	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	75	Local variable 'intermediate' could be declared final
5086	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	79	These nested if statements could be combined
5087	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	80	System.out.print is used
5088	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	87	These nested if statements could be combined
5089	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	88	System.out.print is used
5090	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	95	Found 'DU'-anomaly for variable 'outputBuf' (lines '95'-'177').
5091	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	101	A catch statement that catches an exception only to wrap it in a new instance of the same type of exception and throw it should be avoided
5092	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	102	New exception is thrown in catch block, original stack trace may be lost
5093	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	121	Avoid variables with short names like mk
5094	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	131	Avoid if (x != y) ..; else ..;
5095	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	134	Avoid instantiating new objects inside loops
5096	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	140	Avoid variables with short names like id
5097	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	141	Avoid using if statements without curly braces
5098	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	143	Avoid instantiating new objects inside loops
5099	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	153	Avoid instantiating new objects inside loops
5100	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	159	System.out.print is used
5101	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	169	System.out.print is used
5102	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	172	These nested if statements could be combined
5103	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	173	System.out.print is used
5104	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Avoid excessively long variable names like writeTransitionsNo
5105	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Avoid using implementation types like 'LinkedList'; use the interface instead
5106	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Avoid using implementation types like 'LinkedList'; use the interface instead
5107	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Parameter 'arclist' is not assigned and could be declared final
5108	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Parameter 'dataBuf' is not assigned and could be declared final
5109	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	192	Parameter 'from' is not assigned and could be declared final
5110	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	197	Found 'DD'-anomaly for variable 'current' (lines '197'-'197').
5111	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	197	Found 'DU'-anomaly for variable 'current' (lines '197'-'223').
5112	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	200	Avoid instantiating new objects inside loops
5113	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	206	New exception is thrown in catch block, original stack trace may be lost
5114	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	235	Avoid using implementation types like 'LinkedList'; use the interface instead
5115	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	235	Avoid using implementation types like 'LinkedList'; use the interface instead
5116	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	235	Avoid variables with short names like es
5117	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	245	Avoid variables with short names like sr
5118	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	247	Avoid using if...else statements without curly braces
5119	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	248	Avoid using if...else statements without curly braces
5120	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	273	Avoid unused local variables such as 'currentstate'.
5121	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	273	Found 'DU'-anomaly for variable 'currentstate' (lines '273'-'321').
5122	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	332	Avoid excessively long variable names like immediateTransition
5123	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	334	Found 'DD'-anomaly for variable 'transitionsfired' (lines '334'-'341').
5124	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	335	Found 'DD'-anomaly for variable 'newstate' (lines '335'-'339').
5125	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	335	Found 'DU'-anomaly for variable 'newstate' (lines '335'-'347').
5126	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	336	Avoid excessively long variable names like enabledTransitions
5127	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	336	Found 'DU'-anomaly for variable 'enabledTransitions' (lines '336'-'347').
5128	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	340	Avoid instantiating new objects inside loops
5129	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	341	Found 'DD'-anomaly for variable 'transitionsfired' (lines '341'-'341').
5130	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	342	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
5131	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	369	Found 'DU'-anomaly for variable 'CMinus' (lines '369'-'382').
5132	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	370	Found 'DU'-anomaly for variable 'CPlus' (lines '370'-'382').
5133	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	373	Found 'DD'-anomaly for variable 'newmarking' (lines '373'-'379').
5134	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	379	Found 'DD'-anomaly for variable 'newmarking' (lines '379'-'379').
5135	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	394	Avoid excessively long variable names like immediateTransitions
5136	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	394	The method 'getTransitionEnabledStatusArray' has a Cyclomatic Complexity of 13.
5137	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	396	Found 'DD'-anomaly for variable 'result' (lines '396'-'407').
5138	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	397	Found 'DD'-anomaly for variable 'hasTimed' (lines '397'-'428').
5139	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	397	Found 'DU'-anomaly for variable 'hasTimed' (lines '397'-'447').
5140	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	398	Found 'DD'-anomaly for variable 'hasImmediate' (lines '398'-'431').
5141	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	398	Found 'DU'-anomaly for variable 'hasImmediate' (lines '398'-'447').
5142	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	400	Found 'DU'-anomaly for variable 'transArray' (lines '400'-'447').
5143	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	407	Found 'DD'-anomaly for variable 'result' (lines '407'-'407').
5144	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	407	Found 'DD'-anomaly for variable 'result' (lines '407'-'413').
5145	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	413	Found 'DD'-anomaly for variable 'result' (lines '413'-'413').
5146	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	413	Found 'DD'-anomaly for variable 'result' (lines '413'-'438').
5147	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	427	Avoid unnecessary comparisons in boolean expressions
5148	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	428	Found 'DD'-anomaly for variable 'hasTimed' (lines '428'-'428').
5149	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	431	Found 'DD'-anomaly for variable 'hasImmediate' (lines '431'-'431').
5150	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	437	Avoid unnecessary comparisons in boolean expressions
5151	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	438	Found 'DD'-anomaly for variable 'result' (lines '438'-'438').
5152	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	460	Found 'DD'-anomaly for variable 'hasTimed' (lines '460'-'468').
5153	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	461	Found 'DD'-anomaly for variable 'hasImmediate' (lines '461'-'471').
5154	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	462	Avoid excessively long variable names like enabledTransitions
5155	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	462	Found 'DU'-anomaly for variable 'enabledTransitions' (lines '462'-'481').
5156	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	465	Avoid unnecessary comparisons in boolean expressions
5157	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	468	Found 'DD'-anomaly for variable 'hasTimed' (lines '468'-'468').
5158	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	470	Avoid unnecessary comparisons in boolean expressions
5159	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	471	Found 'DD'-anomaly for variable 'hasImmediate' (lines '471'-'471').
5160	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	475	Avoid unnecessary comparisons in boolean expressions
5161	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	476	A method should have only one exit point, and that should be the last statement in the method
5162	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	479	Avoid using if...else statements without curly braces
5163	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	482	Avoid unused private methods such as 'prob(DataLayer,State,State)'.
5164	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	503	Avoid using implementation types like 'LinkedList'; use the interface instead
5165	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	503	Avoid using implementation types like 'LinkedList'; use the interface instead
5166	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	505	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
5167	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	514	A method should have only one exit point, and that should be the last statement in the method
5168	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	519	A method should have only one exit point, and that should be the last statement in the method
5169	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	547	The method 'rateorprob' has a Cyclomatic Complexity of 18.
5170	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	547	The method rateorprob() has an NPath complexity of 4096
5171	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	554	Found 'DD'-anomaly for variable 'marking1EnabledTransitions' (lines '554'-'583').
5172	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	555	Found 'DD'-anomaly for variable 'matchingTransition' (lines '555'-'560').
5173	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	560	Found 'DD'-anomaly for variable 'matchingTransition' (lines '560'-'560').
5174	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	560	Found 'DD'-anomaly for variable 'matchingTransition' (lines '560'-'569').
5175	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	569	Found 'DD'-anomaly for variable 'matchingTransition' (lines '569'-'569').
5176	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	569	Found 'DU'-anomaly for variable 'matchingTransition' (lines '569'-'625').
5177	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	583	Found 'DD'-anomaly for variable 'marking1EnabledTransitions' (lines '583'-'583').
5178	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	583	Found 'DU'-anomaly for variable 'marking1EnabledTransitions' (lines '583'-'625').
5179	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	591	Found 'DD'-anomaly for variable 'enabledAndMatching' (lines '591'-'595').
5180	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	594	These nested if statements could be combined
5181	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	595	Found 'DD'-anomaly for variable 'enabledAndMatching' (lines '595'-'595').
5182	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	600	A method should have only one exit point, and that should be the last statement in the method
5183	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	612	A method should have only one exit point, and that should be the last statement in the method
5184	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	636	Avoid using implementation types like 'LinkedList'; use the interface instead
5185	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	636	Avoid using implementation types like 'LinkedList'; use the interface instead
5186	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	638	Avoid using if statements without curly braces
5187	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	640	Found 'DU'-anomaly for variable 'iterator' (lines '640'-'648').
5188	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	644	Avoid using if statements without curly braces
5189	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	660	Avoid using implementation types like 'LinkedList'; use the interface instead
5190	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	660	Avoid using implementation types like 'LinkedList'; use the interface instead
5191	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	662	Found 'DU'-anomaly for variable 'iterator' (lines '662'-'670').
5192	src/pipe/dataLayer/calculations/LargeStateSpaceGen.java	666	Avoid using if statements without curly braces
5193	src/pipe/dataLayer/calculations/Marking.java	5	Package name contains upper case characters
5194	src/pipe/dataLayer/calculations/Marking.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
5195	src/pipe/dataLayer/calculations/Marking.java	25	Possible unsafe assignment to a non-final static field in a constructor.
5196	src/pipe/dataLayer/calculations/Marking.java	27	Parameter 'idInput' is not assigned and could be declared final
5197	src/pipe/dataLayer/calculations/Marking.java	27	Parameter 'markingInput' is not assigned and could be declared final
5198	src/pipe/dataLayer/calculations/Marking.java	32	Parameter 'Tangible' is not assigned and could be declared final
5199	src/pipe/dataLayer/calculations/Marking.java	32	Parameter 'idInput' is not assigned and could be declared final
5200	src/pipe/dataLayer/calculations/Marking.java	32	Parameter 'markingInput' is not assigned and could be declared final
5201	src/pipe/dataLayer/calculations/Marking.java	43	Avoid unused constructor parameters such as 'idInput'.
5202	src/pipe/dataLayer/calculations/Marking.java	58	A getX() method which returns a boolean should be named isX()
5203	src/pipe/dataLayer/calculations/Marking.java	61	Avoid variables with short names like m1
5204	src/pipe/dataLayer/calculations/Marking.java	61	The method name and parameter number are suspiciously close to equals(Object)
5205	src/pipe/dataLayer/calculations/Marking.java	63	A method should have only one exit point, and that should be the last statement in the method
5206	src/pipe/dataLayer/calculations/Marking.java	63	Avoid unnecessary if..then..else statements when returning a boolean
5207	src/pipe/dataLayer/calculations/Marking.java	63	Avoid using if...else statements without curly braces
5208	src/pipe/dataLayer/calculations/Marking.java	64	Avoid using if...else statements without curly braces
5209	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	1	Package name contains upper case characters
5210	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	13	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
5211	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	13	The class 'NewSteadyStateSolver' has a Cyclomatic Complexity of 6 (Highest = 10).
5212	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	22	Parameter 'matrixQTData' is not assigned and could be declared final
5213	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	22	Parameter 'matrixQTInd' is not assigned and could be declared final
5214	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	22	The method 'solve' has a Cyclomatic Complexity of 10.
5215	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	23	Avoid variables with short names like n
5216	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	24	Avoid variables with short names like pi
5217	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	24	Found 'DD'-anomaly for variable 'pi' (lines '24'-'28').
5218	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	25	Found 'DD'-anomaly for variable 'pisub1' (lines '25'-'29').
5219	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	28	Found 'DD'-anomaly for variable 'pi' (lines '28'-'28').
5220	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	29	Found 'DD'-anomaly for variable 'pisub1' (lines '29'-'29').
5221	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	29	Found 'DD'-anomaly for variable 'pisub1' (lines '29'-'70').
5222	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	32	Avoid unused local variables such as 'Aqii'.
5223	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	32	Local variable 'Aqii' could be declared final
5224	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	39	Found 'DU'-anomaly for variable 'iterations' (lines '39'-'93').
5225	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	56	Avoid variables with short names like k
5226	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	57	Local variable 'size' could be declared final
5227	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	69	This statement may have some unnecessary parentheses
5228	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	70	Found 'DD'-anomaly for variable 'pisub1' (lines '70'-'70').
5229	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	70	Found 'DU'-anomaly for variable 'pisub1' (lines '70'-'93').
5230	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	71	Found 'DU'-anomaly for variable 'pi' (lines '71'-'93').
5231	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	74	Found 'DD'-anomaly for variable 'sub' (lines '74'-'76').
5232	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	74	Found 'DU'-anomaly for variable 'sub' (lines '74'-'93').
5233	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	76	Avoid assignments in operands
5234	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	76	Found 'DD'-anomaly for variable 'sub' (lines '76'-'79').
5235	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	79	Avoid assignments in operands
5236	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	79	Avoid using if statements without curly braces
5237	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	79	Found 'DD'-anomaly for variable 'sub' (lines '79'-'74').
5238	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	79	Found 'DD'-anomaly for variable 'sub' (lines '79'-'76').
5239	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	79	Found 'DU'-anomaly for variable 'sub' (lines '79'-'93').
5240	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	89	System.out.print is used
5241	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	90	System.exit() should not be used in J2EE/JEE apps
5242	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	103	Parameter 'matrixQTData' is not assigned and could be declared final
5243	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	103	Parameter 'matrixQTInd' is not assigned and could be declared final
5244	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	103	The method 'solveP' has a Cyclomatic Complexity of 10.
5245	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	104	Avoid variables with short names like n
5246	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	105	Avoid variables with short names like pi
5247	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	105	Found 'DD'-anomaly for variable 'pi' (lines '105'-'110').
5248	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	106	Found 'DD'-anomaly for variable 'pisub1' (lines '106'-'111').
5249	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	107	Found 'DU'-anomaly for variable 'pit0' (lines '107'-'160').
5250	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	107	Local variable 'pit0' could be declared final
5251	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	110	Found 'DD'-anomaly for variable 'pi' (lines '110'-'110').
5252	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	111	Found 'DD'-anomaly for variable 'pisub1' (lines '111'-'111').
5253	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	111	Found 'DD'-anomaly for variable 'pisub1' (lines '111'-'137').
5254	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	117	Found 'DU'-anomaly for variable 'iterations' (lines '117'-'160').
5255	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	125	Local variable 'size' could be declared final
5256	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	128	Local variable 'mq' could be declared final
5257	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	135	This statement may have some unnecessary parentheses
5258	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	137	Found 'DD'-anomaly for variable 'pisub1' (lines '137'-'137').
5259	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	137	Found 'DU'-anomaly for variable 'pisub1' (lines '137'-'160').
5260	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	138	Found 'DU'-anomaly for variable 'pi' (lines '138'-'160').
5261	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	141	Found 'DD'-anomaly for variable 'sub' (lines '141'-'143').
5262	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	141	Found 'DU'-anomaly for variable 'sub' (lines '141'-'160').
5263	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	143	Avoid assignments in operands
5264	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	143	Found 'DD'-anomaly for variable 'sub' (lines '143'-'146').
5265	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	146	Avoid assignments in operands
5266	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	146	Avoid using if statements without curly braces
5267	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	146	Found 'DD'-anomaly for variable 'sub' (lines '146'-'141').
5268	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	146	Found 'DD'-anomaly for variable 'sub' (lines '146'-'143').
5269	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	146	Found 'DU'-anomaly for variable 'sub' (lines '146'-'160').
5270	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	156	System.out.print is used
5271	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	157	System.exit() should not be used in J2EE/JEE apps
5272	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	170	Found 'DU'-anomaly for variable 'sum' (lines '170'-'179').
5273	src/pipe/dataLayer/calculations/NewSteadyStateSolver.java	185	Parameter 'args' is not assigned and could be declared final
5274	src/pipe/dataLayer/calculations/NotConvergingException.java	1	Package name contains upper case characters
5275	src/pipe/dataLayer/calculations/NotValidExpressionException.java	1	Package name contains upper case characters
5276	src/pipe/dataLayer/calculations/NotValidExpressionException.java	15	Parameter 'message' is not assigned and could be declared final
5277	src/pipe/dataLayer/calculations/Queue.java	4	Package name contains upper case characters
5278	src/pipe/dataLayer/calculations/Queue.java	16	Avoid using implementation types like 'ArrayList'; use the interface instead
5279	src/pipe/dataLayer/calculations/Queue.java	16	Avoid using implementation types like 'ArrayList'; use the interface instead
5280	src/pipe/dataLayer/calculations/Queue.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
5281	src/pipe/dataLayer/calculations/Queue.java	16	Private field 'queueList' could be made final; it is only initialized in the declaration or constructor.
5282	src/pipe/dataLayer/calculations/Queue.java	28	Parameter 'object' is not assigned and could be declared final
5283	src/pipe/dataLayer/calculations/Queue.java	39	Local variable 'temp' could be declared final
5284	src/pipe/dataLayer/calculations/State.java	4	Package name contains upper case characters
5285	src/pipe/dataLayer/calculations/State.java	14	It is somewhat confusing to have a field name matching the declaring class name
5286	src/pipe/dataLayer/calculations/State.java	14	Use explicit scoping instead of the default package private level
5287	src/pipe/dataLayer/calculations/State.java	16	Parameter 'new_state' is not assigned and could be declared final
5288	src/pipe/dataLayer/calculations/State.java	17	Overridable method 'setState' called during object construction
5289	src/pipe/dataLayer/calculations/State.java	20	Parameter 'new_state' is not assigned and could be declared final
5290	src/pipe/dataLayer/calculations/State.java	21	Overridable method 'setState' called during object construction
5291	src/pipe/dataLayer/calculations/State.java	24	Parameter 'new_state' is not assigned and could be declared final
5292	src/pipe/dataLayer/calculations/State.java	30	Returning 'state' may expose an internal array.
5293	src/pipe/dataLayer/calculations/State.java	44	Parameter 'test' is not assigned and could be declared final
5294	src/pipe/dataLayer/calculations/State.java	44	The method name and parameter number are suspiciously close to equals(Object)
5295	src/pipe/dataLayer/calculations/State.java	45	Local variable 'teststate' could be declared final
5296	src/pipe/dataLayer/calculations/State.java	47	Avoid using if statements without curly braces
5297	src/pipe/dataLayer/calculations/State.java	48	A method should have only one exit point, and that should be the last statement in the method
5298	src/pipe/dataLayer/calculations/State.java	51	Avoid using if statements without curly braces
5299	src/pipe/dataLayer/calculations/State.java	52	A method should have only one exit point, and that should be the last statement in the method
5300	src/pipe/dataLayer/calculations/State.java	63	Ensure you override both equals() and hashCode()
5301	src/pipe/dataLayer/calculations/State.java	64	Found 'DD'-anomaly for variable 'total' (lines '64'-'67').
5302	src/pipe/dataLayer/calculations/State.java	75	Avoid using if statements without curly braces
5303	src/pipe/dataLayer/calculations/State.java	91	Found 'DD'-anomaly for variable 'total' (lines '91'-'94').
5304	src/pipe/dataLayer/calculations/State.java	103	Avoid instantiating String objects; this is usually unnecessary.
5305	src/pipe/dataLayer/calculations/State.java	104	Local variable 'length' could be declared final
5306	src/pipe/dataLayer/calculations/State.java	106	Prefer StringBuffer over += for concatenating strings
5307	src/pipe/dataLayer/calculations/State.java	108	Prefer StringBuffer over += for concatenating strings
5308	src/pipe/dataLayer/calculations/State.java	110	Prefer StringBuffer over += for concatenating strings
5309	src/pipe/dataLayer/calculations/StateList.java	4	Package name contains upper case characters
5310	src/pipe/dataLayer/calculations/StateList.java	20	Avoid using implementation types like 'ArrayList'; use the interface instead
5311	src/pipe/dataLayer/calculations/StateList.java	20	Avoid using implementation types like 'ArrayList'; use the interface instead
5312	src/pipe/dataLayer/calculations/StateList.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
5313	src/pipe/dataLayer/calculations/StateList.java	20	Private field 'list' could be made final; it is only initialized in the declaration or constructor.
5314	src/pipe/dataLayer/calculations/StateList.java	37	Parameter 'readTangible' is not assigned and could be declared final
5315	src/pipe/dataLayer/calculations/StateList.java	37	Parameter 'rgfile' is not assigned and could be declared final
5316	src/pipe/dataLayer/calculations/StateList.java	39	Local variable 'input' could be declared final
5317	src/pipe/dataLayer/calculations/StateList.java	40	Local variable 'rgheader' could be declared final
5318	src/pipe/dataLayer/calculations/StateList.java	41	Local variable 'currentrecord' could be declared final
5319	src/pipe/dataLayer/calculations/StateList.java	43	Local variable 'numtangiblestates' could be declared final
5320	src/pipe/dataLayer/calculations/StateList.java	47	Avoid using if...else statements without curly braces
5321	src/pipe/dataLayer/calculations/StateList.java	48	Avoid using if...else statements without curly braces
5322	src/pipe/dataLayer/calculations/StateList.java	53	New exception is thrown in catch block, original stack trace may be lost
5323	src/pipe/dataLayer/calculations/StateList.java	72	Avoid variables with short names like id
5324	src/pipe/dataLayer/calculations/StateList.java	72	Avoid variables with short names like m
5325	src/pipe/dataLayer/calculations/StateList.java	72	Parameter 'id' is not assigned and could be declared final
5326	src/pipe/dataLayer/calculations/StateList.java	72	Parameter 'm' is not assigned and could be declared final
5327	src/pipe/dataLayer/calculations/StateList.java	73	Local variable 'marking' could be declared final
5328	src/pipe/dataLayer/calculations/StateList.java	78	Avoid variables with short names like m
5329	src/pipe/dataLayer/calculations/StateList.java	78	Parameter 'm' is not assigned and could be declared final
5330	src/pipe/dataLayer/calculations/StateList.java	88	A method should have only one exit point, and that should be the last statement in the method
5331	src/pipe/dataLayer/calculations/StateList.java	90	Avoid using if statements without curly braces
5332	src/pipe/dataLayer/calculations/StateList.java	94	Avoid unnecessary comparisons in boolean expressions
5333	src/pipe/dataLayer/calculations/StateList.java	96	A method should have only one exit point, and that should be the last statement in the method
5334	src/pipe/dataLayer/calculations/StateList.java	102	Avoid unnecessary return statements
5335	src/pipe/dataLayer/calculations/StateList.java	108	Avoid variables with short names like m
5336	src/pipe/dataLayer/calculations/StateList.java	121	Avoid variables with short names like i
5337	src/pipe/dataLayer/calculations/StateList.java	126	System.out.print is used
5338	src/pipe/dataLayer/calculations/StateList.java	146	Avoid if (x != y) ..; else ..;
5339	src/pipe/dataLayer/calculations/StateList.java	147	A method should have only one exit point, and that should be the last statement in the method
5340	src/pipe/dataLayer/calculations/StateList.java	147	Avoid using if...else statements without curly braces
5341	src/pipe/dataLayer/calculations/StateList.java	149	Avoid using if...else statements without curly braces
5342	src/pipe/dataLayer/calculations/StateList.java	152	A method should have only one exit point, and that should be the last statement in the method
5343	src/pipe/dataLayer/calculations/StateList.java	166	System.out.print is used
5344	src/pipe/dataLayer/calculations/StateList.java	173	System.out.print is used
5345	src/pipe/dataLayer/calculations/StateList.java	175	System.out.print is used
5346	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	4	Package name contains upper case characters
5347	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	41	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
5348	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	41	The class 'StateSpaceGenerator' has a Cyclomatic Complexity of 6 (Highest = 34).
5349	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	41	This class has too many methods, consider refactoring it.
5350	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	44	It is somewhat confusing to have a field name with the same name as a method
5351	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	57	JUnit 4 tests that execute tests should use the @Test annotation
5352	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	58	Local variable 'array1' could be declared final
5353	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	59	Local variable 'array2' could be declared final
5354	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	61	Avoid unused local variables such as 'state1'.
5355	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	61	Found 'DU'-anomaly for variable 'state1' (lines '61'-'63').
5356	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	61	Local variable 'state1' could be declared final
5357	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	62	Avoid unused local variables such as 'state2'.
5358	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	62	Found 'DU'-anomaly for variable 'state2' (lines '62'-'63').
5359	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	62	Local variable 'state2' could be declared final
5360	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	65	Avoid really long methods.
5361	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	65	Parameter 'pnmlData' is not assigned and could be declared final
5362	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	65	Parameter 'reachGraph' is not assigned and could be declared final
5363	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	65	The method 'generate' has a Cyclomatic Complexity of 15.
5364	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	65	The method generate() has an NPath complexity of 1296
5365	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	67	Local variable 'current_marking' could be declared final
5366	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	68	Found 'DU'-anomaly for variable 'statearraysize' (lines '68'-'175').
5367	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	70	Found 'DU'-anomaly for variable 'statesQueue' (lines '70'-'175').
5368	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	71	Found 'DU'-anomaly for variable 'tansuccessor' (lines '71'-'175').
5369	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	73	Found 'DU'-anomaly for variable 'sprime' (lines '73'-'175').
5370	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	74	Found 'DU'-anomaly for variable 'currentState' (lines '74'-'175').
5371	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	75	Avoid variables with short names like s
5372	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	75	Found 'DU'-anomaly for variable 's' (lines '75'-'175').
5373	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	81	Found 'DU'-anomaly for variable 'exploredStates' (lines '81'-'175').
5374	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	85	Found 'DU'-anomaly for variable 'localarcs' (lines '85'-'175').
5375	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	88	Found 'DU'-anomaly for variable 'numStates' (lines '88'-'175').
5376	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	89	Found 'DU'-anomaly for variable 'numTransitions' (lines '89'-'175').
5377	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	90	Avoid excessively long variable names like numtransitionsfired
5378	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	90	Found 'DU'-anomaly for variable 'numtransitionsfired' (lines '90'-'175').
5379	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	100	These nested if statements could be combined
5380	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	101	System.out.print is used
5381	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	106	Found 'DU'-anomaly for variable 'outputFile' (lines '106'-'175').
5382	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	112	System.out.print is used
5383	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	128	Avoid if (x != y) ..; else ..;
5384	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	130	Avoid instantiating new objects inside loops
5385	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	135	Avoid variables with short names like id
5386	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	136	Avoid using if statements without curly braces
5387	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	138	Avoid instantiating new objects inside loops
5388	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	145	Avoid instantiating new objects inside loops
5389	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	146	Avoid using if statements without curly braces
5390	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	151	System.out.print is used
5391	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	153	System.out.print is used
5392	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	162	Avoid using if...else statements without curly braces
5393	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	164	Avoid using if...else statements without curly braces
5394	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	167	System.out.print is used
5395	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	171	These nested if statements could be combined
5396	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	Avoid really long methods.
5397	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	Parameter 'pnmlData' is not assigned and could be declared final
5398	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	Parameter 'reachGraph' is not assigned and could be declared final
5399	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	Parameter 'resultspane' is not assigned and could be declared final
5400	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	The method 'generate' has a Cyclomatic Complexity of 34.
5401	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	The method generate() has an NCSS line count of 141
5402	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	192	The method generate() has an NPath complexity of 180576
5403	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	196	Avoid using final local variables, turn them into fields
5404	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	196	Found 'DU'-anomaly for variable 'MAX_TRIES' (lines '196'-'422').
5405	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	199	Found 'DU'-anomaly for variable 'statearraysize' (lines '199'-'422').
5406	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	201	Found 'DU'-anomaly for variable 'tangibleStates' (lines '201'-'422').
5407	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	202	Found 'DU'-anomaly for variable 'vanishingStates' (lines '202'-'422').
5408	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	203	Found 'DU'-anomaly for variable 'vansuccessor' (lines '203'-'422').
5409	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	204	Found 'DU'-anomaly for variable 'tansuccessor' (lines '204'-'422').
5410	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	206	Found 'DU'-anomaly for variable 'vprime' (lines '206'-'422').
5411	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	207	Found 'DU'-anomaly for variable 'sprime' (lines '207'-'422').
5412	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	208	Found 'DU'-anomaly for variable 'tangible' (lines '208'-'422').
5413	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	209	Avoid variables with short names like s
5414	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	209	Found 'DU'-anomaly for variable 's' (lines '209'-'422').
5415	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	210	Avoid variables with short names like v
5416	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	210	Found 'DU'-anomaly for variable 'v' (lines '210'-'422').
5417	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	216	Found 'DU'-anomaly for variable 'exploredStates' (lines '216'-'422').
5418	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	220	Found 'DU'-anomaly for variable 'localarcs' (lines '220'-'422').
5419	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	224	Avoid variables with short names like p
5420	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	226	Found 'DU'-anomaly for variable 'epsilon' (lines '226'-'422').
5421	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	229	Found 'DU'-anomaly for variable 'numtangiblestates' (lines '229'-'422').
5422	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	230	Found 'DU'-anomaly for variable 'numtransitions' (lines '230'-'422').
5423	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	231	Avoid excessively long variable names like numtransitionsfired
5424	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	231	Found 'DU'-anomaly for variable 'numtransitionsfired' (lines '231'-'422').
5425	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	234	Avoid using final local variables, turn them into fields
5426	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	235	Found 'DU'-anomaly for variable 'progress' (lines '235'-'422').
5427	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	245	These nested if statements could be combined
5428	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	251	Found 'DU'-anomaly for variable 'outputFile' (lines '251'-'422').
5429	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	288	Avoid instantiating new objects inside loops
5430	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	296	Avoid instantiating new objects inside loops
5431	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	325	Avoid using if...else statements without curly braces
5432	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	333	Avoid if (x != y) ..; else ..;
5433	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	341	Avoid using if statements without curly braces
5434	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	359	Avoid if (x != y) ..; else ..;
5435	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	367	Avoid using if statements without curly braces
5436	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	409	Avoid using if...else statements without curly braces
5437	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	411	Avoid using if...else statements without curly braces
5438	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	418	These nested if statements could be combined
5439	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	435	Found 'DD'-anomaly for variable 'hasTimed' (lines '435'-'443').
5440	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	436	Found 'DD'-anomaly for variable 'hasImmediate' (lines '436'-'446').
5441	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	437	Avoid excessively long variable names like enabledTransitions
5442	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	437	Found 'DU'-anomaly for variable 'enabledTransitions' (lines '437'-'456').
5443	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	440	Avoid unnecessary comparisons in boolean expressions
5444	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	443	Found 'DD'-anomaly for variable 'hasTimed' (lines '443'-'443').
5445	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	445	Avoid unnecessary comparisons in boolean expressions
5446	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	446	Found 'DD'-anomaly for variable 'hasImmediate' (lines '446'-'446').
5447	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	450	Avoid unnecessary comparisons in boolean expressions
5448	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	450	Avoid unnecessary comparisons in boolean expressions
5449	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	451	A method should have only one exit point, and that should be the last statement in the method
5450	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	466	Avoid excessively long variable names like immediateTransition
5451	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	468	Found 'DD'-anomaly for variable 'transitionsfired' (lines '468'-'475').
5452	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	469	Found 'DD'-anomaly for variable 'newstate' (lines '469'-'473').
5453	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	469	Found 'DU'-anomaly for variable 'newstate' (lines '469'-'481').
5454	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	470	Avoid excessively long variable names like enabledTransitions
5455	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	470	Found 'DU'-anomaly for variable 'enabledTransitions' (lines '470'-'481').
5456	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	475	Found 'DD'-anomaly for variable 'transitionsfired' (lines '475'-'475').
5457	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	476	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
5458	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	503	Found 'DU'-anomaly for variable 'CMinus' (lines '503'-'516').
5459	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	504	Found 'DU'-anomaly for variable 'CPlus' (lines '504'-'516').
5460	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	507	Found 'DD'-anomaly for variable 'newmarking' (lines '507'-'513').
5461	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	513	Found 'DD'-anomaly for variable 'newmarking' (lines '513'-'513').
5462	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	529	Avoid using implementation types like 'LinkedList'; use the interface instead
5463	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	529	Avoid using implementation types like 'LinkedList'; use the interface instead
5464	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	531	Avoid using if statements without curly braces
5465	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	532	A method should have only one exit point, and that should be the last statement in the method
5466	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	533	Found 'DU'-anomaly for variable 'iterator' (lines '533'-'541').
5467	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	538	A method should have only one exit point, and that should be the last statement in the method
5468	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	553	Avoid using implementation types like 'LinkedList'; use the interface instead
5469	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	553	Avoid using implementation types like 'LinkedList'; use the interface instead
5470	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	555	Found 'DU'-anomaly for variable 'iterator' (lines '555'-'563').
5471	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	560	A method should have only one exit point, and that should be the last statement in the method
5472	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	575	Avoid using implementation types like 'LinkedList'; use the interface instead
5473	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	575	Avoid using implementation types like 'LinkedList'; use the interface instead
5474	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	620	The method 'rateorprob' has a Cyclomatic Complexity of 18.
5475	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	620	The method rateorprob() has an NPath complexity of 4096
5476	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	627	Found 'DD'-anomaly for variable 'marking1EnabledTransitions' (lines '627'-'656').
5477	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	628	Found 'DD'-anomaly for variable 'matchingTransition' (lines '628'-'633').
5478	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	633	Found 'DD'-anomaly for variable 'matchingTransition' (lines '633'-'633').
5479	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	633	Found 'DD'-anomaly for variable 'matchingTransition' (lines '633'-'642').
5480	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	642	Found 'DD'-anomaly for variable 'matchingTransition' (lines '642'-'642').
5481	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	642	Found 'DU'-anomaly for variable 'matchingTransition' (lines '642'-'698').
5482	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	655	Avoid unnecessary comparisons in boolean expressions
5483	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	656	Found 'DD'-anomaly for variable 'marking1EnabledTransitions' (lines '656'-'656').
5484	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	656	Found 'DU'-anomaly for variable 'marking1EnabledTransitions' (lines '656'-'698').
5485	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	664	Found 'DD'-anomaly for variable 'enabledAndMatching' (lines '664'-'668').
5486	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	667	These nested if statements could be combined
5487	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	668	Found 'DD'-anomaly for variable 'enabledAndMatching' (lines '668'-'668').
5488	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	673	A method should have only one exit point, and that should be the last statement in the method
5489	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	714	Avoid using implementation types like 'LinkedList'; use the interface instead
5490	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	714	Avoid using implementation types like 'LinkedList'; use the interface instead
5491	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	716	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
5492	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	753	Avoid using implementation types like 'LinkedList'; use the interface instead
5493	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	753	Avoid using implementation types like 'LinkedList'; use the interface instead
5494	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	767	New exception is thrown in catch block, original stack trace may be lost
5495	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	777	New exception is thrown in catch block, original stack trace may be lost
5496	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	802	Avoid unused local variables such as 'currentstate'.
5497	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	802	Found 'DU'-anomaly for variable 'currentstate' (lines '802'-'849').
5498	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	861	The method 'getTransitionEnabledStatusArray' has a Cyclomatic Complexity of 12.
5499	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	863	Found 'DD'-anomaly for variable 'result' (lines '863'-'874').
5500	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	864	Found 'DD'-anomaly for variable 'hasTimed' (lines '864'-'896').
5501	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	865	Found 'DD'-anomaly for variable 'hasImmediate' (lines '865'-'899').
5502	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	867	Found 'DU'-anomaly for variable 'transArray' (lines '867'-'915').
5503	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	874	Found 'DD'-anomaly for variable 'result' (lines '874'-'874').
5504	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	874	Found 'DD'-anomaly for variable 'result' (lines '874'-'880').
5505	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	880	Found 'DD'-anomaly for variable 'result' (lines '880'-'880').
5506	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	880	Found 'DD'-anomaly for variable 'result' (lines '880'-'906').
5507	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	896	Found 'DD'-anomaly for variable 'hasTimed' (lines '896'-'896').
5508	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	899	Found 'DD'-anomaly for variable 'hasImmediate' (lines '899'-'899').
5509	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	906	Found 'DD'-anomaly for variable 'result' (lines '906'-'906').
5510	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	939	Avoid unused private methods such as 'printArray(State)'.
5511	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	954	Found non-transient, non-static member. Please mark as transient or provide accessors.
5512	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	954	Use explicit scoping instead of the default package private level
5513	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	955	Use explicit scoping instead of the default package private level
5514	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	956	Found non-transient, non-static member. Please mark as transient or provide accessors.
5515	src/pipe/dataLayer/calculations/StateSpaceGenerator.java	956	Use explicit scoping instead of the default package private level
5516	src/pipe/dataLayer/calculations/StateSpaceTooBigException.java	4	Package name contains upper case characters
5517	src/pipe/dataLayer/calculations/StateSpaceTooBigException.java	15	Avoid variables with short names like n
5518	src/pipe/dataLayer/calculations/StateSpaceTooBigException.java	15	Parameter 'n' is not assigned and could be declared final
5519	src/pipe/dataLayer/calculations/SteadyStateSolver.java	4	Package name contains upper case characters
5520	src/pipe/dataLayer/calculations/SteadyStateSolver.java	25	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
5521	src/pipe/dataLayer/calculations/SteadyStateSolver.java	25	The class 'SteadyStateSolver' has a Cyclomatic Complexity of 7 (Highest = 16).
5522	src/pipe/dataLayer/calculations/SteadyStateSolver.java	27	Avoid unnecessary constructors - the compiler will generate these for you
5523	src/pipe/dataLayer/calculations/SteadyStateSolver.java	31	Parameter 'rgfile' is not assigned and could be declared final
5524	src/pipe/dataLayer/calculations/SteadyStateSolver.java	34	Local variable 'Qprime' could be declared final
5525	src/pipe/dataLayer/calculations/SteadyStateSolver.java	37	Avoid variables with short names like pi
5526	src/pipe/dataLayer/calculations/SteadyStateSolver.java	37	Local variable 'pi' could be declared final
5527	src/pipe/dataLayer/calculations/SteadyStateSolver.java	59	Avoid using implementation types like 'LinkedList'; use the interface instead
5528	src/pipe/dataLayer/calculations/SteadyStateSolver.java	59	Avoid using implementation types like 'LinkedList'; use the interface instead
5529	src/pipe/dataLayer/calculations/SteadyStateSolver.java	59	Parameter 'rgfile' is not assigned and could be declared final
5530	src/pipe/dataLayer/calculations/SteadyStateSolver.java	59	The method 'createSparseMatrix' has a Cyclomatic Complexity of 11.
5531	src/pipe/dataLayer/calculations/SteadyStateSolver.java	60	Local variable 'rgheader' could be declared final
5532	src/pipe/dataLayer/calculations/SteadyStateSolver.java	61	Found 'DD'-anomaly for variable 'inputfile' (lines '61'-'76').
5533	src/pipe/dataLayer/calculations/SteadyStateSolver.java	64	Found 'DU'-anomaly for variable 'Qprime' (lines '64'-'142').
5534	src/pipe/dataLayer/calculations/SteadyStateSolver.java	65	Found 'DU'-anomaly for variable 'rowsum' (lines '65'-'142').
5535	src/pipe/dataLayer/calculations/SteadyStateSolver.java	69	Found 'DU'-anomaly for variable 'current' (lines '69'-'142').
5536	src/pipe/dataLayer/calculations/SteadyStateSolver.java	69	Local variable 'current' could be declared final
5537	src/pipe/dataLayer/calculations/SteadyStateSolver.java	71	Avoid variables with short names like f
5538	src/pipe/dataLayer/calculations/SteadyStateSolver.java	71	Local variable 'f' could be declared final
5539	src/pipe/dataLayer/calculations/SteadyStateSolver.java	79	System.out.print is used
5540	src/pipe/dataLayer/calculations/SteadyStateSolver.java	80	New exception is thrown in catch block, original stack trace may be lost
5541	src/pipe/dataLayer/calculations/SteadyStateSolver.java	92	Avoid instantiating new objects inside loops
5542	src/pipe/dataLayer/calculations/SteadyStateSolver.java	94	System.out.print is used
5543	src/pipe/dataLayer/calculations/SteadyStateSolver.java	106	Avoid instantiating new objects inside loops
5544	src/pipe/dataLayer/calculations/SteadyStateSolver.java	109	System.out.print is used
5545	src/pipe/dataLayer/calculations/SteadyStateSolver.java	116	Avoid instantiating new objects inside loops
5546	src/pipe/dataLayer/calculations/SteadyStateSolver.java	118	System.out.print is used
5547	src/pipe/dataLayer/calculations/SteadyStateSolver.java	120	New exception is thrown in catch block, original stack trace may be lost
5548	src/pipe/dataLayer/calculations/SteadyStateSolver.java	122	System.out.print is used
5549	src/pipe/dataLayer/calculations/SteadyStateSolver.java	124	New exception is thrown in catch block, original stack trace may be lost
5550	src/pipe/dataLayer/calculations/SteadyStateSolver.java	128	New exception is thrown in catch block, original stack trace may be lost
5551	src/pipe/dataLayer/calculations/SteadyStateSolver.java	134	New exception is thrown in catch block, original stack trace may be lost
5552	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	Avoid using implementation types like 'LinkedList'; use the interface instead
5553	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	Avoid using implementation types like 'LinkedList'; use the interface instead
5554	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	Avoid variables with short names like A
5555	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	Parameter 'A' is not assigned and could be declared final
5556	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	The method 'gaussSiedel' has a Cyclomatic Complexity of 16.
5557	src/pipe/dataLayer/calculations/SteadyStateSolver.java	155	The method gaussSiedel() has an NPath complexity of 2024
5558	src/pipe/dataLayer/calculations/SteadyStateSolver.java	158	Avoid variables with short names like x
5559	src/pipe/dataLayer/calculations/SteadyStateSolver.java	158	Found 'DD'-anomaly for variable 'x' (lines '158'-'175').
5560	src/pipe/dataLayer/calculations/SteadyStateSolver.java	161	Found 'DD'-anomaly for variable 'converged' (lines '161'-'176').
5561	src/pipe/dataLayer/calculations/SteadyStateSolver.java	163	Avoid unused local variables such as 'xprevious'.
5562	src/pipe/dataLayer/calculations/SteadyStateSolver.java	164	Avoid unused local variables such as 'change'.
5563	src/pipe/dataLayer/calculations/SteadyStateSolver.java	166	Avoid unused local variables such as 'numconverged'.
5564	src/pipe/dataLayer/calculations/SteadyStateSolver.java	166	Found 'DU'-anomaly for variable 'numconverged' (lines '166'-'239').
5565	src/pipe/dataLayer/calculations/SteadyStateSolver.java	169	Avoid variables with short names like f
5566	src/pipe/dataLayer/calculations/SteadyStateSolver.java	175	Found 'DD'-anomaly for variable 'x' (lines '175'-'175').
5567	src/pipe/dataLayer/calculations/SteadyStateSolver.java	176	Found 'DD'-anomaly for variable 'converged' (lines '176'-'176').
5568	src/pipe/dataLayer/calculations/SteadyStateSolver.java	176	Found 'DD'-anomaly for variable 'converged' (lines '176'-'212').
5569	src/pipe/dataLayer/calculations/SteadyStateSolver.java	192	Avoid if (x != y) ..; else ..;
5570	src/pipe/dataLayer/calculations/SteadyStateSolver.java	193	Avoid using if...else statements without curly braces
5571	src/pipe/dataLayer/calculations/SteadyStateSolver.java	195	Avoid using if...else statements without curly braces
5572	src/pipe/dataLayer/calculations/SteadyStateSolver.java	197	Avoid using if statements without curly braces
5573	src/pipe/dataLayer/calculations/SteadyStateSolver.java	209	Avoid using if statements without curly braces
5574	src/pipe/dataLayer/calculations/SteadyStateSolver.java	212	Found 'DD'-anomaly for variable 'converged' (lines '212'-'212').
5575	src/pipe/dataLayer/calculations/SteadyStateSolver.java	212	Found 'DD'-anomaly for variable 'converged' (lines '212'-'215').
5576	src/pipe/dataLayer/calculations/SteadyStateSolver.java	215	Avoid using if...else statements without curly braces
5577	src/pipe/dataLayer/calculations/SteadyStateSolver.java	215	Found 'DD'-anomaly for variable 'converged' (lines '215'-'212').
5578	src/pipe/dataLayer/calculations/SteadyStateSolver.java	215	Found 'DD'-anomaly for variable 'converged' (lines '215'-'215').
5579	src/pipe/dataLayer/calculations/SteadyStateSolver.java	221	Found 'DD'-anomaly for variable 'plausible' (lines '221'-'224').
5580	src/pipe/dataLayer/calculations/SteadyStateSolver.java	223	Avoid using if statements without curly braces
5581	src/pipe/dataLayer/calculations/SteadyStateSolver.java	224	Found 'DD'-anomaly for variable 'plausible' (lines '224'-'224').
5582	src/pipe/dataLayer/calculations/SteadyStateSolver.java	231	Found 'DU'-anomaly for variable 'sum' (lines '231'-'239').
5583	src/pipe/dataLayer/calculations/SteadyStateSolver.java	241	Parameter 'c' is not assigned and could be declared final
5584	src/pipe/dataLayer/calculations/SteadyStateSolver.java	243	Avoid unnecessary comparisons in boolean expressions
5585	src/pipe/dataLayer/calculations/SteadyStateSolver.java	243	Avoid using if statements without curly braces
5586	src/pipe/dataLayer/calculations/SteadyStateSolver.java	244	A method should have only one exit point, and that should be the last statement in the method
5587	src/pipe/dataLayer/calculations/SteadyStateSolver.java	260	Found non-transient, non-static member. Please mark as transient or provide accessors.
5588	src/pipe/dataLayer/calculations/SteadyStateSolver.java	260	Private field 'row' could be made final; it is only initialized in the declaration or constructor.
5589	src/pipe/dataLayer/calculations/SteadyStateSolver.java	261	Found non-transient, non-static member. Please mark as transient or provide accessors.
5590	src/pipe/dataLayer/calculations/SteadyStateSolver.java	263	Parameter 'rt' is not assigned and could be declared final
5591	src/pipe/dataLayer/calculations/SteadyStateSolver.java	266	Avoid using if...else statements without curly braces
5592	src/pipe/dataLayer/calculations/SteadyStateSolver.java	268	Avoid using if...else statements without curly braces
5593	src/pipe/dataLayer/calculations/TimelessTrapException.java	4	Package name contains upper case characters
5594	src/pipe/dataLayer/calculations/TreeTooBigException.java	5	Package name contains upper case characters
5595	src/pipe/dataLayer/calculations/VanishingState.java	4	Package name contains upper case characters
5596	src/pipe/dataLayer/calculations/VanishingState.java	15	Use explicit scoping instead of the default package private level
5597	src/pipe/dataLayer/calculations/VanishingState.java	17	Parameter 'initial_rate' is not assigned and could be declared final
5598	src/pipe/dataLayer/calculations/VanishingState.java	17	Parameter 'new_state' is not assigned and could be declared final
5599	src/pipe/dataLayer/calculations/VanishingState.java	19	Overridable method 'setRate' called during object construction
5600	src/pipe/dataLayer/calculations/VanishingState.java	22	Parameter 'initial_rate' is not assigned and could be declared final
5601	src/pipe/dataLayer/calculations/VanishingState.java	22	Parameter 'new_state' is not assigned and could be declared final
5602	src/pipe/dataLayer/calculations/VanishingState.java	24	Overridable method 'setRate' called during object construction
5603	src/pipe/dataLayer/calculations/VanishingState.java	27	Parameter 'new_rate' is not assigned and could be declared final
5604	src/pipe/dataLayer/calculations/myNode.java	7	Package name contains upper case characters
5605	src/pipe/dataLayer/calculations/myNode.java	14	Class names should begin with an uppercase character
5606	src/pipe/dataLayer/calculations/myNode.java	14	The class 'myNode' has a Cyclomatic Complexity of 7 (Highest = 23).
5607	src/pipe/dataLayer/calculations/myNode.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
5608	src/pipe/dataLayer/calculations/myNode.java	16	Use explicit scoping instead of the default package private level
5609	src/pipe/dataLayer/calculations/myNode.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
5610	src/pipe/dataLayer/calculations/myNode.java	17	Use explicit scoping instead of the default package private level
5611	src/pipe/dataLayer/calculations/myNode.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
5612	src/pipe/dataLayer/calculations/myNode.java	18	Use explicit scoping instead of the default package private level
5613	src/pipe/dataLayer/calculations/myNode.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
5614	src/pipe/dataLayer/calculations/myNode.java	19	Use explicit scoping instead of the default package private level
5615	src/pipe/dataLayer/calculations/myNode.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
5616	src/pipe/dataLayer/calculations/myNode.java	20	Use explicit scoping instead of the default package private level
5617	src/pipe/dataLayer/calculations/myNode.java	25	Variables should start with a lowercase character
5618	src/pipe/dataLayer/calculations/myNode.java	25	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
5619	src/pipe/dataLayer/calculations/myNode.java	34	Parameter 'atree' is not assigned and could be declared final
5620	src/pipe/dataLayer/calculations/myNode.java	34	Parameter 'marking_array' is not assigned and could be declared final
5621	src/pipe/dataLayer/calculations/myNode.java	34	Parameter 'treeDepth' is not assigned and could be declared final
5622	src/pipe/dataLayer/calculations/myNode.java	34	The user-supplied array 'marking_array' is stored directly.
5623	src/pipe/dataLayer/calculations/myNode.java	35	Avoid variables with short names like i
5624	src/pipe/dataLayer/calculations/myNode.java	81	Parameter 'atree' is not assigned and could be declared final
5625	src/pipe/dataLayer/calculations/myNode.java	81	Parameter 'marking_array' is not assigned and could be declared final
5626	src/pipe/dataLayer/calculations/myNode.java	81	The user-supplied array 'marking_array' is stored directly.
5627	src/pipe/dataLayer/calculations/myNode.java	82	Avoid variables with short names like i
5628	src/pipe/dataLayer/calculations/myNode.java	127	Method names should not start with capital letters
5629	src/pipe/dataLayer/calculations/myNode.java	135	This statement may have some unnecessary parentheses
5630	src/pipe/dataLayer/calculations/myNode.java	139	A method should have only one exit point, and that should be the last statement in the method
5631	src/pipe/dataLayer/calculations/myNode.java	164	Found 'DD'-anomaly for variable 'marking' (lines '164'-'172').
5632	src/pipe/dataLayer/calculations/myNode.java	164	Found 'DD'-anomaly for variable 'marking' (lines '164'-'174').
5633	src/pipe/dataLayer/calculations/myNode.java	168	Found 'DD'-anomaly for variable 'CMinusValue' (lines '168'-'168').
5634	src/pipe/dataLayer/calculations/myNode.java	168	Found 'DU'-anomaly for variable 'CMinusValue' (lines '168'-'184').
5635	src/pipe/dataLayer/calculations/myNode.java	168	This statement may have some unnecessary parentheses
5636	src/pipe/dataLayer/calculations/myNode.java	169	Found 'DD'-anomaly for variable 'CPlusValue' (lines '169'-'169').
5637	src/pipe/dataLayer/calculations/myNode.java	169	Found 'DU'-anomaly for variable 'CPlusValue' (lines '169'-'184').
5638	src/pipe/dataLayer/calculations/myNode.java	169	This statement may have some unnecessary parentheses
5639	src/pipe/dataLayer/calculations/myNode.java	171	Avoid if (x != y) ..; else ..;
5640	src/pipe/dataLayer/calculations/myNode.java	172	Avoid using if...else statements without curly braces
5641	src/pipe/dataLayer/calculations/myNode.java	172	Found 'DD'-anomaly for variable 'marking' (lines '172'-'172').
5642	src/pipe/dataLayer/calculations/myNode.java	172	Found 'DD'-anomaly for variable 'marking' (lines '172'-'174').
5643	src/pipe/dataLayer/calculations/myNode.java	174	Avoid using if...else statements without curly braces
5644	src/pipe/dataLayer/calculations/myNode.java	174	Found 'DD'-anomaly for variable 'marking' (lines '174'-'172').
5645	src/pipe/dataLayer/calculations/myNode.java	174	Found 'DD'-anomaly for variable 'marking' (lines '174'-'174').
5646	src/pipe/dataLayer/calculations/myNode.java	194	Method names should not start with capital letters
5647	src/pipe/dataLayer/calculations/myNode.java	194	The method 'RecursiveExpansion' has a Cyclomatic Complexity of 13.
5648	src/pipe/dataLayer/calculations/myNode.java	197	Avoid variables with short names like i
5649	src/pipe/dataLayer/calculations/myNode.java	198	Avoid excessively long variable names like A_Transition_Is_Enabled
5650	src/pipe/dataLayer/calculations/myNode.java	198	Found 'DD'-anomaly for variable 'A_Transition_Is_Enabled' (lines '198'-'214').
5651	src/pipe/dataLayer/calculations/myNode.java	207	Avoid unnecessary comparisons in boolean expressions
5652	src/pipe/dataLayer/calculations/myNode.java	214	Found 'DD'-anomaly for variable 'A_Transition_Is_Enabled' (lines '214'-'214').
5653	src/pipe/dataLayer/calculations/myNode.java	214	Found 'DU'-anomaly for variable 'A_Transition_Is_Enabled' (lines '214'-'284').
5654	src/pipe/dataLayer/calculations/myNode.java	239	Avoid instantiating new objects inside loops
5655	src/pipe/dataLayer/calculations/myNode.java	247	Found 'DU'-anomaly for variable 'allOmegas' (lines '247'-'284').
5656	src/pipe/dataLayer/calculations/myNode.java	251	This statement may have some unnecessary parentheses
5657	src/pipe/dataLayer/calculations/myNode.java	267	Avoid if (x != y) ..; else ..;
5658	src/pipe/dataLayer/calculations/myNode.java	276	Avoid empty if statements
5659	src/pipe/dataLayer/calculations/myNode.java	281	Avoid empty if statements
5660	src/pipe/dataLayer/calculations/myNode.java	292	Method names should not start with capital letters
5661	src/pipe/dataLayer/calculations/myNode.java	294	Local variable 'path' could be declared final
5662	src/pipe/dataLayer/calculations/myNode.java	296	Avoid variables with short names like i
5663	src/pipe/dataLayer/calculations/myNode.java	300	Found 'DU'-anomaly for variable 'pos' (lines '300'-'330').
5664	src/pipe/dataLayer/calculations/myNode.java	319	Found 'DU'-anomaly for variable 'pos' (lines '319'-'330').
5665	src/pipe/dataLayer/calculations/myNode.java	343	Method names should not start with capital letters
5666	src/pipe/dataLayer/calculations/myNode.java	343	The method 'RecursiveExpansion' has a Cyclomatic Complexity of 23.
5667	src/pipe/dataLayer/calculations/myNode.java	343	The method RecursiveExpansion() has an NPath complexity of 8360
5668	src/pipe/dataLayer/calculations/myNode.java	346	Avoid variables with short names like i
5669	src/pipe/dataLayer/calculations/myNode.java	347	Avoid excessively long variable names like A_Transition_Is_Enabled
5670	src/pipe/dataLayer/calculations/myNode.java	347	Found 'DD'-anomaly for variable 'A_Transition_Is_Enabled' (lines '347'-'384').
5671	src/pipe/dataLayer/calculations/myNode.java	350	Found 'DD'-anomaly for variable 'hasTimed' (lines '350'-'361').
5672	src/pipe/dataLayer/calculations/myNode.java	352	Local variable 'transCount' could be declared final
5673	src/pipe/dataLayer/calculations/myNode.java	353	Avoid excessively long variable names like adjustForVanishingStates
5674	src/pipe/dataLayer/calculations/myNode.java	353	Found 'DD'-anomaly for variable 'adjustForVanishingStates' (lines '353'-'356').
5675	src/pipe/dataLayer/calculations/myNode.java	355	Avoid unnecessary comparisons in boolean expressions
5676	src/pipe/dataLayer/calculations/myNode.java	360	Avoid unnecessary comparisons in boolean expressions
5677	src/pipe/dataLayer/calculations/myNode.java	360	Avoid unnecessary comparisons in boolean expressions
5678	src/pipe/dataLayer/calculations/myNode.java	361	Found 'DD'-anomaly for variable 'hasTimed' (lines '361'-'361').
5679	src/pipe/dataLayer/calculations/myNode.java	362	Avoid unnecessary comparisons in boolean expressions
5680	src/pipe/dataLayer/calculations/myNode.java	370	Found 'DD'-anomaly for variable 'adjustForVanishingStates' (lines '370'-'370').
5681	src/pipe/dataLayer/calculations/myNode.java	370	Found 'DU'-anomaly for variable 'adjustForVanishingStates' (lines '370'-'424').
5682	src/pipe/dataLayer/calculations/myNode.java	384	Found 'DD'-anomaly for variable 'A_Transition_Is_Enabled' (lines '384'-'384').
5683	src/pipe/dataLayer/calculations/myNode.java	384	Found 'DU'-anomaly for variable 'A_Transition_Is_Enabled' (lines '384'-'424').
5684	src/pipe/dataLayer/calculations/myNode.java	396	Avoid instantiating new objects inside loops
5685	src/pipe/dataLayer/calculations/myNode.java	402	Found 'DU'-anomaly for variable 'allOmegas' (lines '402'-'424').
5686	src/pipe/dataLayer/calculations/myNode.java	404	This statement may have some unnecessary parentheses
5687	src/pipe/dataLayer/calculations/myNode.java	414	Avoid if (x != y) ..; else ..;
5688	src/pipe/dataLayer/calculations/myNode.java	418	Avoid empty if statements
5689	src/pipe/dataLayer/calculations/myNode.java	421	Avoid empty if statements
5690	src/pipe/dataLayer/calculations/myNode.java	439	Method names should not start with capital letters
5691	src/pipe/dataLayer/calculations/myNode.java	439	The method 'InsertOmegas' has a Cyclomatic Complexity of 12.
5692	src/pipe/dataLayer/calculations/myNode.java	442	Avoid excessively long variable names like All_Elements_Greater_Or_Equal
5693	src/pipe/dataLayer/calculations/myNode.java	442	Found 'DD'-anomaly for variable 'All_Elements_Greater_Or_Equal' (lines '442'-'463').
5694	src/pipe/dataLayer/calculations/myNode.java	443	Avoid excessively long variable names like Element_Is_Strictly_Greater
5695	src/pipe/dataLayer/calculations/myNode.java	448	Found 'DD'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '448'-'452').
5696	src/pipe/dataLayer/calculations/myNode.java	452	Found 'DD'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '452'-'452').
5697	src/pipe/dataLayer/calculations/myNode.java	452	Found 'DD'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '452'-'479').
5698	src/pipe/dataLayer/calculations/myNode.java	452	Found 'DU'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '452'-'517').
5699	src/pipe/dataLayer/calculations/myNode.java	463	Found 'DD'-anomaly for variable 'All_Elements_Greater_Or_Equal' (lines '463'-'474').
5700	src/pipe/dataLayer/calculations/myNode.java	479	Found 'DD'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '479'-'479').
5701	src/pipe/dataLayer/calculations/myNode.java	479	Found 'DU'-anomaly for variable 'Element_Is_Strictly_Greater' (lines '479'-'517').
5702	src/pipe/dataLayer/calculations/myNode.java	511	A method should have only one exit point, and that should be the last statement in the method
5703	src/pipe/dataLayer/calculations/myNode.java	534	A method should have only one exit point, and that should be the last statement in the method
5704	src/pipe/dataLayer/calculations/myNode.java	544	A method should have only one exit point, and that should be the last statement in the method
5705	src/pipe/dataLayer/calculations/myNode.java	551	These nested if statements could be combined
5706	src/pipe/dataLayer/calculations/myNode.java	553	A method should have only one exit point, and that should be the last statement in the method
5707	src/pipe/dataLayer/calculations/myNode.java	584	Avoid using if...else statements without curly braces
5708	src/pipe/dataLayer/calculations/myNode.java	588	Local variable 'size' could be declared final
5709	src/pipe/dataLayer/calculations/myNode.java	590	System.out.print is used
5710	src/pipe/dataLayer/calculations/myNode.java	592	System.out.print is used
5711	src/pipe/dataLayer/calculations/myTree.java	6	Package name contains upper case characters
5712	src/pipe/dataLayer/calculations/myTree.java	17	Class names should begin with an uppercase character
5713	src/pipe/dataLayer/calculations/myTree.java	19	Variables should start with a lowercase character
5714	src/pipe/dataLayer/calculations/myTree.java	19	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
5715	src/pipe/dataLayer/calculations/myTree.java	20	Avoid excessively long variable names like more_Than_One_Token
5716	src/pipe/dataLayer/calculations/myTree.java	20	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
5717	src/pipe/dataLayer/calculations/myTree.java	21	Avoid excessively long variable names like no_Enabled_Transitions
5718	src/pipe/dataLayer/calculations/myTree.java	21	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
5719	src/pipe/dataLayer/calculations/myTree.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
5720	src/pipe/dataLayer/calculations/myTree.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
5721	src/pipe/dataLayer/calculations/myTree.java	27	Variables should start with a lowercase character
5722	src/pipe/dataLayer/calculations/myTree.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
5723	src/pipe/dataLayer/calculations/myTree.java	29	Avoid excessively long variable names like number_transitions
5724	src/pipe/dataLayer/calculations/myTree.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
5725	src/pipe/dataLayer/calculations/myTree.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
5726	src/pipe/dataLayer/calculations/myTree.java	36	Parameter 'minus' is not assigned and could be declared final
5727	src/pipe/dataLayer/calculations/myTree.java	36	Parameter 'plus' is not assigned and could be declared final
5728	src/pipe/dataLayer/calculations/myTree.java	36	Parameter 'tree_root' is not assigned and could be declared final
5729	src/pipe/dataLayer/calculations/myTree.java	36	The user-supplied array 'tree_root' is stored directly.
5730	src/pipe/dataLayer/calculations/myTree.java	53	Parameter 'minus' is not assigned and could be declared final
5731	src/pipe/dataLayer/calculations/myTree.java	53	Parameter 'plus' is not assigned and could be declared final
5732	src/pipe/dataLayer/calculations/myTree.java	53	The user-supplied array 'tree_root' is stored directly.
5733	src/pipe/dataLayer/calculations/myTree.java	58	Local variable 'transCount' could be declared final
5734	src/pipe/dataLayer/calculations/myTree.java	61	Avoid unnecessary comparisons in boolean expressions
5735	src/pipe/dataLayer/calculations/myTree.java	70	Avoid unused local variables such as 'markSize'.
5736	src/pipe/dataLayer/calculations/myTree.java	70	Local variable 'markSize' could be declared final
5737	src/pipe/gui/AnimationHandler.java	5	Avoid unused imports such as 'javax.swing.JMenuItem'
5738	src/pipe/gui/AnimationHandler.java	5	Avoid unused imports such as 'javax.swing.JMenuItem'
5739	src/pipe/gui/AnimationHandler.java	6	Avoid unused imports such as 'javax.swing.JPopupMenu'
5740	src/pipe/gui/AnimationHandler.java	6	Avoid unused imports such as 'javax.swing.JPopupMenu'
5741	src/pipe/gui/AnimationHandler.java	27	Avoid variables with short names like e
5742	src/pipe/gui/AnimationHandler.java	27	Parameter 'e' is not assigned and could be declared final
5743	src/pipe/gui/AnimationHandler.java	28	Local variable 'transition' could be declared final
5744	src/pipe/gui/AnimationHistory.java	27	Avoid using implementation types like 'Vector'; use the interface instead
5745	src/pipe/gui/AnimationHistory.java	27	Avoid using implementation types like 'Vector'; use the interface instead
5746	src/pipe/gui/AnimationHistory.java	27	Consider replacing this Vector with the newer java.util.List
5747	src/pipe/gui/AnimationHistory.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
5748	src/pipe/gui/AnimationHistory.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
5749	src/pipe/gui/AnimationHistory.java	28	Private field 'initText' could be made final; it is only initialized in the declaration or constructor.
5750	src/pipe/gui/AnimationHistory.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
5751	src/pipe/gui/AnimationHistory.java	29	Private field 'doc' could be made final; it is only initialized in the declaration or constructor.
5752	src/pipe/gui/AnimationHistory.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
5753	src/pipe/gui/AnimationHistory.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
5754	src/pipe/gui/AnimationHistory.java	36	Parameter 'text' is not assigned and could be declared final
5755	src/pipe/gui/AnimationHistory.java	44	Use ArrayList instead of Vector
5756	src/pipe/gui/AnimationHistory.java	51	Local variable 'def' could be declared final
5757	src/pipe/gui/AnimationHistory.java	64	Parameter 'transitionName' is not assigned and could be declared final
5758	src/pipe/gui/AnimationHistory.java	81	Found 'DU'-anomaly for variable 'count' (lines '81'-'97').
5759	src/pipe/gui/AnimationHistory.java	82	Avoid unused local variables such as 'currentStyle'.
5760	src/pipe/gui/AnimationHistory.java	82	Found 'DU'-anomaly for variable 'currentStyle' (lines '82'-'97').
5761	src/pipe/gui/AnimationHistory.java	82	Local variable 'currentStyle' could be declared final
5762	src/pipe/gui/AnimationHistory.java	84	Avoid variables with short names like e
5763	src/pipe/gui/AnimationHistory.java	84	Local variable 'e' could be declared final
5764	src/pipe/gui/AnimationHistory.java	92	Found 'DU'-anomaly for variable 'count' (lines '92'-'97').
5765	src/pipe/gui/AnimationHistory.java	95	System.out.print is used
5766	src/pipe/gui/Animator.java	40	The class 'Animator' has a Cyclomatic Complexity of 3 (Highest = 11).
5767	src/pipe/gui/Animator.java	40	This class has too many methods, consider refactoring it.
5768	src/pipe/gui/Animator.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
5769	src/pipe/gui/Animator.java	42	Use explicit scoping instead of the default package private level
5770	src/pipe/gui/Animator.java	43	Use explicit scoping instead of the default package private level
5771	src/pipe/gui/Animator.java	45	Avoid using implementation types like 'ArrayList'; use the interface instead
5772	src/pipe/gui/Animator.java	45	Avoid using implementation types like 'ArrayList'; use the interface instead
5773	src/pipe/gui/Animator.java	45	Possible unsafe assignment to a non-final static field in a constructor.
5774	src/pipe/gui/Animator.java	53	Parameter 'evt' is not assigned and could be declared final
5775	src/pipe/gui/Animator.java	71	Local variable 'current' could be declared final
5776	src/pipe/gui/Animator.java	74	Avoid excessively long variable names like transitionIterator
5777	src/pipe/gui/Animator.java	74	Local variable 'transitionIterator' could be declared final
5778	src/pipe/gui/Animator.java	76	Local variable 'tempTransition' could be declared final
5779	src/pipe/gui/Animator.java	77	Avoid unnecessary comparisons in boolean expressions
5780	src/pipe/gui/Animator.java	82	Avoid empty if statements
5781	src/pipe/gui/Animator.java	82	Avoid unnecessary comparisons in boolean expressions
5782	src/pipe/gui/Animator.java	93	Local variable 'current' could be declared final
5783	src/pipe/gui/Animator.java	96	Avoid excessively long variable names like transitionIterator
5784	src/pipe/gui/Animator.java	96	Local variable 'transitionIterator' could be declared final
5785	src/pipe/gui/Animator.java	99	Avoid unnecessary comparisons in boolean expressions
5786	src/pipe/gui/Animator.java	113	Avoid excessively long variable names like transitionIterator
5787	src/pipe/gui/Animator.java	139	Avoid using if...else statements without curly braces
5788	src/pipe/gui/Animator.java	140	Avoid variables with short names like s
5789	src/pipe/gui/Animator.java	171	The method 'doRandomFiring' has a Cyclomatic Complexity of 11.
5790	src/pipe/gui/Animator.java	174	Avoid variables with short names like t
5791	src/pipe/gui/Animator.java	181	Avoid if (x != y) ..; else ..;
5792	src/pipe/gui/Animator.java	185	Avoid using if...else statements without curly braces
5793	src/pipe/gui/Animator.java	188	Avoid using if...else statements without curly braces
5794	src/pipe/gui/Animator.java	197	Found 'DD'-anomaly for variable 'max' (lines '197'-'211').
5795	src/pipe/gui/Animator.java	204	System.out.print is used
5796	src/pipe/gui/Animator.java	208	System.out.print is used
5797	src/pipe/gui/Animator.java	214	System.out.print is used
5798	src/pipe/gui/Animator.java	220	Avoid excessively long variable names like rateOfUntaggedMode
5799	src/pipe/gui/Animator.java	225	System.out.print is used
5800	src/pipe/gui/Animator.java	233	System.out.print is used
5801	src/pipe/gui/Animator.java	241	Avoid using if...else statements without curly braces
5802	src/pipe/gui/Animator.java	242	Avoid using if...else statements without curly braces
5803	src/pipe/gui/Animator.java	277	Avoid using for statements without curly braces
5804	src/pipe/gui/Animator.java	292	Avoid unnecessary return statements
5805	src/pipe/gui/Animator.java	311	Parameter 'transition' is not assigned and could be declared final
5806	src/pipe/gui/Animator.java	336	Parameter 'transition' is not assigned and could be declared final
5807	src/pipe/gui/Animator.java	370	Avoid using for statements without curly braces
5808	src/pipe/gui/Animator.java	373	Avoid using for statements without curly braces
5809	src/pipe/gui/Animator.java	382	Use block level rather than method level synchronization
5810	src/pipe/gui/Animator.java	385	Parameter 'numberSequences' is not assigned and could be declared final
5811	src/pipe/gui/Animator.java	385	Use block level rather than method level synchronization
5812	src/pipe/gui/AnnotationNoteHandler.java	20	Parameter 'contentpane' is not assigned and could be declared final
5813	src/pipe/gui/AnnotationNoteHandler.java	20	Parameter 'note' is not assigned and could be declared final
5814	src/pipe/gui/AnnotationNoteHandler.java	29	Avoid variables with short names like e
5815	src/pipe/gui/AnnotationNoteHandler.java	29	Parameter 'e' is not assigned and could be declared final
5816	src/pipe/gui/AnnotationNoteHandler.java	31	Local variable 'popup' could be declared final
5817	src/pipe/gui/AnnotationNoteHandler.java	41	Avoid using if...else statements without curly braces
5818	src/pipe/gui/AnnotationNoteHandler.java	43	Avoid using if...else statements without curly braces
5819	src/pipe/gui/AnnotationNoteHandler.java	58	Avoid variables with short names like e
5820	src/pipe/gui/AnnotationNoteHandler.java	58	Parameter 'e' is not assigned and could be declared final
5821	src/pipe/gui/AnnotationNoteHandler.java	60	Avoid using if statements without curly braces
5822	src/pipe/gui/AnnotationNoteHandler.java	64	Avoid variables with short names like e
5823	src/pipe/gui/AnnotationNoteHandler.java	64	Parameter 'e' is not assigned and could be declared final
5824	src/pipe/gui/AnnotationNoteHandler.java	66	Avoid using if statements without curly braces
5825	src/pipe/gui/AnnotationNoteHandler.java	70	Avoid variables with short names like e
5826	src/pipe/gui/AnnotationNoteHandler.java	71	Avoid using if statements without curly braces
5827	src/pipe/gui/AnnotationNoteHandler.java	75	Avoid variables with short names like e
5828	src/pipe/gui/AnnotationNoteHandler.java	77	These nested if statements could be combined
5829	src/pipe/gui/ArcHandler.java	18	Parameter 'contentpane' is not assigned and could be declared final
5830	src/pipe/gui/ArcHandler.java	18	Parameter 'obj' is not assigned and could be declared final
5831	src/pipe/gui/ArcHandler.java	24	Avoid variables with short names like e
5832	src/pipe/gui/ArcHandler.java	24	Parameter 'e' is not assigned and could be declared final
5833	src/pipe/gui/ArcHandler.java	26	Local variable 'popup' could be declared final
5834	src/pipe/gui/ArcHandler.java	38	Avoid using if...else statements without curly braces
5835	src/pipe/gui/ArcHandler.java	40	Avoid using if...else statements without curly braces
5836	src/pipe/gui/ArcHandler.java	50	Avoid variables with short names like e
5837	src/pipe/gui/ArcHandler.java	50	Parameter 'e' is not assigned and could be declared final
5838	src/pipe/gui/ArcHandler.java	61	Avoid variables with short names like e
5839	src/pipe/gui/ArcHandler.java	61	Parameter 'e' is not assigned and could be declared final
5840	src/pipe/gui/ArcHandler.java	62	A switch with less than 3 branches is inefficient, use a if statement instead.
5841	src/pipe/gui/ArcHandler.java	62	Switch statements should have a default label
5842	src/pipe/gui/ArcHandler.java	64	Avoid using if statements without curly braces
5843	src/pipe/gui/ArcHandler.java	65	Local variable 'currentObject' could be declared final
5844	src/pipe/gui/ArcHandler.java	66	Local variable 'oldLocation' could be declared final
5845	src/pipe/gui/ArcHandler.java	68	Local variable 'transX' could be declared final
5846	src/pipe/gui/ArcHandler.java	69	Local variable 'transY' could be declared final
5847	src/pipe/gui/ArcKeyboardEventHandler.java	15	Possible unsafe assignment to a non-final static field in a constructor.
5848	src/pipe/gui/ArcKeyboardEventHandler.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
5849	src/pipe/gui/ArcKeyboardEventHandler.java	17	Private field 'arcBeingDrawn' could be made final; it is only initialized in the declaration or constructor.
5850	src/pipe/gui/ArcKeyboardEventHandler.java	19	Parameter 'anArc' is not assigned and could be declared final
5851	src/pipe/gui/ArcKeyboardEventHandler.java	24	Avoid variables with short names like e
5852	src/pipe/gui/ArcKeyboardEventHandler.java	24	Parameter 'e' is not assigned and could be declared final
5853	src/pipe/gui/ArcKeyboardEventHandler.java	31	Local variable 'aView' could be declared final
5854	src/pipe/gui/ArcKeyboardEventHandler.java	32	Assigning an Object to null is a code smell. Consider refactoring.
5855	src/pipe/gui/ArcKeyboardEventHandler.java	41	Avoid variables with short names like e
5856	src/pipe/gui/ArcKeyboardEventHandler.java	41	Parameter 'e' is not assigned and could be declared final
5857	src/pipe/gui/ArcKeyboardEventHandler.java	48	Avoid variables with short names like e
5858	src/pipe/gui/ArcKeyboardEventHandler.java	48	Document empty method
5859	src/pipe/gui/ArcKeyboardEventHandler.java	48	Parameter 'e' is not assigned and could be declared final
5860	src/pipe/gui/ArcPathPointHandler.java	19	Parameter 'contentpane' is not assigned and could be declared final
5861	src/pipe/gui/ArcPathPointHandler.java	19	Parameter 'obj' is not assigned and could be declared final
5862	src/pipe/gui/ArcPathPointHandler.java	25	Avoid variables with short names like e
5863	src/pipe/gui/ArcPathPointHandler.java	25	Parameter 'e' is not assigned and could be declared final
5864	src/pipe/gui/ArcPathPointHandler.java	29	Avoid using if...else statements without curly braces
5865	src/pipe/gui/ArcPathPointHandler.java	29	Found 'DU'-anomaly for variable 'popup' (lines '29'-'52').
5866	src/pipe/gui/ArcPathPointHandler.java	30	Avoid using if...else statements without curly braces
5867	src/pipe/gui/ArcPathPointHandler.java	30	Found 'DU'-anomaly for variable 'popup' (lines '30'-'52').
5868	src/pipe/gui/ArcPathPointHandler.java	32	A method should have only one exit point, and that should be the last statement in the method
5869	src/pipe/gui/ArcPathPointHandler.java	32	Avoid using if...else statements without curly braces
5870	src/pipe/gui/ArcPathPointHandler.java	36	Avoid using if...else statements without curly braces
5871	src/pipe/gui/ArcPathPointHandler.java	38	Avoid using if...else statements without curly braces
5872	src/pipe/gui/ArcPathPointHandler.java	54	Avoid variables with short names like e
5873	src/pipe/gui/ArcPathPointHandler.java	54	Parameter 'e' is not assigned and could be declared final
5874	src/pipe/gui/ArcPathPointHandler.java	63	Avoid variables with short names like e
5875	src/pipe/gui/ArcPathPointHandler.java	63	Overriding method merely calls super
5876	src/pipe/gui/ArcPathPointHandler.java	63	Parameter 'e' is not assigned and could be declared final
5877	src/pipe/gui/ArcPathPointHandler.java	67	Avoid variables with short names like e
5878	src/pipe/gui/ArrowHead.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
5879	src/pipe/gui/ArrowHead.java	28	Use explicit scoping instead of the default package private level
5880	src/pipe/gui/ArrowHead.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
5881	src/pipe/gui/ArrowHead.java	29	Private field 'pointTo' could be made final; it is only initialized in the declaration or constructor.
5882	src/pipe/gui/ArrowHead.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
5883	src/pipe/gui/ArrowHead.java	32	It is a good practice to call super() in a constructor
5884	src/pipe/gui/ArrowHead.java	40	Parameter '_angle' is not assigned and could be declared final
5885	src/pipe/gui/ArrowHead.java	40	Parameter 'xTo' is not assigned and could be declared final
5886	src/pipe/gui/ArrowHead.java	40	Parameter 'yTo' is not assigned and could be declared final
5887	src/pipe/gui/ArrowHead.java	45	Avoid variables with short names like to
5888	src/pipe/gui/ArrowHead.java	45	Parameter 'from' is not assigned and could be declared final
5889	src/pipe/gui/ArrowHead.java	45	Parameter 'to' is not assigned and could be declared final
5890	src/pipe/gui/ArrowHead.java	52	Avoid using if...else statements without curly braces
5891	src/pipe/gui/ArrowHead.java	54	Avoid using if...else statements without curly braces
5892	src/pipe/gui/ArrowHead.java	57	Avoid using if statements without curly braces
5893	src/pipe/gui/ArrowHead.java	68	Avoid unused private methods such as 'addPoint(Rectangle,float,float)'.
5894	src/pipe/gui/ArrowHead.java	68	Avoid variables with short names like r
5895	src/pipe/gui/ArrowHead.java	68	Avoid variables with short names like x
5896	src/pipe/gui/ArrowHead.java	68	Avoid variables with short names like y
5897	src/pipe/gui/ArrowHead.java	69	Avoid variables with short names like p
5898	src/pipe/gui/ArrowHead.java	69	Local variable 'p' could be declared final
5899	src/pipe/gui/ArrowHead.java	70	A method should have only one exit point, and that should be the last statement in the method
5900	src/pipe/gui/ArrowHead.java	70	Avoid using if...else statements without curly braces
5901	src/pipe/gui/ArrowHead.java	134	Local variable 'transform' could be declared final
5902	src/pipe/gui/ArrowHead.java	144	Local variable 'transform' could be declared final
5903	src/pipe/gui/Constants.java	4	An Interface should be used only to model a behaviour; consider converting this to a class.
5904	src/pipe/gui/Constants.java	8	Avoid excessively long variable names like PROPERTY_FILE_EXTENSION
5905	src/pipe/gui/Constants.java	9	Avoid excessively long variable names like PROPERTY_FILE_DESC
5906	src/pipe/gui/Constants.java	10	Avoid excessively long variable names like CLASS_FILE_EXTENSION
5907	src/pipe/gui/Constants.java	42	Avoid excessively long variable names like DEFAULT_ELEMENT_TYPE
5908	src/pipe/gui/Constants.java	44	Avoid excessively long variable names like PLACE_TRANSITION_HEIGHT
5909	src/pipe/gui/CreateGui.java	15	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
5910	src/pipe/gui/CreateGui.java	21	Avoid using implementation types like 'ArrayList'; use the interface instead
5911	src/pipe/gui/CreateGui.java	21	Avoid using implementation types like 'ArrayList'; use the interface instead
5912	src/pipe/gui/CreateGui.java	46	Assigning an Object to null is a code smell. Consider refactoring.
5913	src/pipe/gui/CreateGui.java	59	Local variable 'moduleManager' could be declared final
5914	src/pipe/gui/CreateGui.java	60	Local variable 'moduleTree' could be declared final
5915	src/pipe/gui/CreateGui.java	66	Local variable 'pane' could be declared final
5916	src/pipe/gui/CreateGui.java	93	Local variable 'tab' could be declared final
5917	src/pipe/gui/CreateGui.java	94	Assigning an Object to null is a code smell. Consider refactoring.
5918	src/pipe/gui/CreateGui.java	98	System.out.print is used
5919	src/pipe/gui/CreateGui.java	106	Local variable 'tab' could be declared final
5920	src/pipe/gui/CreateGui.java	107	Assigning an Object to null is a code smell. Consider refactoring.
5921	src/pipe/gui/CreateGui.java	111	System.out.print is used
5922	src/pipe/gui/CreateGui.java	117	Avoid using if statements without curly braces
5923	src/pipe/gui/CreateGui.java	118	A method should have only one exit point, and that should be the last statement in the method
5924	src/pipe/gui/CreateGui.java	120	Avoid using if statements without curly braces
5925	src/pipe/gui/CreateGui.java	127	Avoid using if statements without curly braces
5926	src/pipe/gui/CreateGui.java	128	A method should have only one exit point, and that should be the last statement in the method
5927	src/pipe/gui/CreateGui.java	130	Avoid using if statements without curly braces
5928	src/pipe/gui/CreateGui.java	143	Consider simply returning the value vs storing it in local variable 'tab'
5929	src/pipe/gui/CreateGui.java	148	Avoid using if statements without curly braces
5930	src/pipe/gui/CreateGui.java	182	A method should have only one exit point, and that should be the last statement in the method
5931	src/pipe/gui/CreateGui.java	184	Consider simply returning the value vs storing it in local variable 'tab'
5932	src/pipe/gui/CreateGui.java	209	Avoid printStackTrace(); use a logger call instead.
5933	src/pipe/gui/DeletePetriNetObjectAction.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
5934	src/pipe/gui/DeletePetriNetObjectAction.java	19	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5935	src/pipe/gui/DeletePetriNetObjectAction.java	21	It is a good practice to call super() in a constructor
5936	src/pipe/gui/DeletePetriNetObjectAction.java	21	Parameter 'component' is not assigned and could be declared final
5937	src/pipe/gui/DeletePetriNetObjectAction.java	28	Avoid variables with short names like e
5938	src/pipe/gui/DeletePetriNetObjectAction.java	28	Parameter 'e' is not assigned and could be declared final
5939	src/pipe/gui/EditAnnotationAction.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
5940	src/pipe/gui/EditAnnotationAction.java	18	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5941	src/pipe/gui/EditAnnotationAction.java	21	It is a good practice to call super() in a constructor
5942	src/pipe/gui/EditAnnotationAction.java	21	Parameter 'component' is not assigned and could be declared final
5943	src/pipe/gui/EditAnnotationAction.java	26	Avoid variables with short names like e
5944	src/pipe/gui/EditAnnotationAction.java	26	Parameter 'e' is not assigned and could be declared final
5945	src/pipe/gui/EditAnnotationBackgroundAction.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
5946	src/pipe/gui/EditAnnotationBackgroundAction.java	16	Private field 'note' could be made final; it is only initialized in the declaration or constructor.
5947	src/pipe/gui/EditAnnotationBackgroundAction.java	18	Avoid variables with short names like an
5948	src/pipe/gui/EditAnnotationBackgroundAction.java	18	It is a good practice to call super() in a constructor
5949	src/pipe/gui/EditAnnotationBackgroundAction.java	18	Parameter 'an' is not assigned and could be declared final
5950	src/pipe/gui/EditAnnotationBackgroundAction.java	22	Avoid variables with short names like e
5951	src/pipe/gui/EditAnnotationBackgroundAction.java	22	Parameter 'e' is not assigned and could be declared final
5952	src/pipe/gui/EditAnnotationBorderAction.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
5953	src/pipe/gui/EditAnnotationBorderAction.java	20	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5954	src/pipe/gui/EditAnnotationBorderAction.java	23	It is a good practice to call super() in a constructor
5955	src/pipe/gui/EditAnnotationBorderAction.java	23	Parameter 'component' is not assigned and could be declared final
5956	src/pipe/gui/EditAnnotationBorderAction.java	30	Avoid variables with short names like e
5957	src/pipe/gui/EditAnnotationBorderAction.java	30	Parameter 'e' is not assigned and could be declared final
5958	src/pipe/gui/EditRateAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
5959	src/pipe/gui/EditRateAction.java	22	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
5960	src/pipe/gui/EditRateAction.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
5961	src/pipe/gui/EditRateAction.java	23	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5962	src/pipe/gui/EditRateAction.java	26	It is a good practice to call super() in a constructor
5963	src/pipe/gui/EditRateAction.java	26	Parameter 'component' is not assigned and could be declared final
5964	src/pipe/gui/EditRateAction.java	26	Parameter 'contentPane' is not assigned and could be declared final
5965	src/pipe/gui/EditRateAction.java	34	Avoid variables with short names like e
5966	src/pipe/gui/EditRateAction.java	34	Parameter 'e' is not assigned and could be declared final
5967	src/pipe/gui/EditRateAction.java	36	Local variable 'currentRate' could be declared final
5968	src/pipe/gui/EditRateAction.java	37	Found 'DD'-anomaly for variable 'input' (lines '37'-'40').
5969	src/pipe/gui/EditRateAction.java	37	Found 'DD'-anomaly for variable 'input' (lines '37'-'43').
5970	src/pipe/gui/EditRateAction.java	40	Avoid using if...else statements without curly braces
5971	src/pipe/gui/EditRateAction.java	43	Avoid using if...else statements without curly braces
5972	src/pipe/gui/EditRateAction.java	52	Local variable 'newRate' could be declared final
5973	src/pipe/gui/EditRateAction.java	70	System.out.print is used
5974	src/pipe/gui/EditServerAction.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
5975	src/pipe/gui/EditServerAction.java	19	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5976	src/pipe/gui/EditServerAction.java	22	It is a good practice to call super() in a constructor
5977	src/pipe/gui/EditServerAction.java	22	Parameter 'component' is not assigned and could be declared final
5978	src/pipe/gui/EditServerAction.java	28	Avoid variables with short names like e
5979	src/pipe/gui/EditServerAction.java	28	Parameter 'e' is not assigned and could be declared final
5980	src/pipe/gui/EditServerAction.java	30	Local variable 'currentServer' could be declared final
5981	src/pipe/gui/EditTaggedAction.java	7	Avoid unused imports such as 'javax.swing.JOptionPane'
5982	src/pipe/gui/EditTaggedAction.java	7	Avoid unused imports such as 'javax.swing.JOptionPane'
5983	src/pipe/gui/EditTaggedAction.java	19	The class 'EditTaggedAction' has a Cyclomatic Complexity of 9 (Highest = 16).
5984	src/pipe/gui/EditTaggedAction.java	22	Avoid unused private fields such as 'contentPane'.
5985	src/pipe/gui/EditTaggedAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
5986	src/pipe/gui/EditTaggedAction.java	22	Perhaps 'contentPane' could be replaced by a local variable.
5987	src/pipe/gui/EditTaggedAction.java	22	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
5988	src/pipe/gui/EditTaggedAction.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
5989	src/pipe/gui/EditTaggedAction.java	23	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
5990	src/pipe/gui/EditTaggedAction.java	26	Avoid variables with short names like cP
5991	src/pipe/gui/EditTaggedAction.java	26	It is a good practice to call super() in a constructor
5992	src/pipe/gui/EditTaggedAction.java	26	Parameter 'cP' is not assigned and could be declared final
5993	src/pipe/gui/EditTaggedAction.java	26	Parameter 'component' is not assigned and could be declared final
5994	src/pipe/gui/EditTaggedAction.java	33	Avoid variables with short names like e
5995	src/pipe/gui/EditTaggedAction.java	33	Parameter 'e' is not assigned and could be declared final
5996	src/pipe/gui/EditTaggedAction.java	33	The method 'actionPerformed' has a Cyclomatic Complexity of 16.
5997	src/pipe/gui/EditTaggedAction.java	35	Local variable 'currentTagged' could be declared final
5998	src/pipe/gui/EditTaggedAction.java	36	Avoid unused local variables such as 'currentWeight'.
5999	src/pipe/gui/EditTaggedAction.java	36	Found 'DU'-anomaly for variable 'currentWeight' (lines '36'-'119').
6000	src/pipe/gui/EditTaggedAction.java	36	Local variable 'currentWeight' could be declared final
6001	src/pipe/gui/EditTaggedAction.java	40	Avoid if (x != y) ..; else ..;
6002	src/pipe/gui/EditTaggedAction.java	44	Avoid excessively long variable names like arcFromTransitions
6003	src/pipe/gui/EditTaggedAction.java	44	Local variable 'arcFromTransitions' could be declared final
6004	src/pipe/gui/EditTaggedAction.java	45	Found 'DD'-anomaly for variable 'arcNum' (lines '45'-'49').
6005	src/pipe/gui/EditTaggedAction.java	46	Found 'DD'-anomaly for variable 'arc' (lines '46'-'50').
6006	src/pipe/gui/EditTaggedAction.java	49	Found 'DD'-anomaly for variable 'arcNum' (lines '49'-'49').
6007	src/pipe/gui/EditTaggedAction.java	50	Found 'DD'-anomaly for variable 'arc' (lines '50'-'50').
6008	src/pipe/gui/EditTaggedAction.java	52	Avoid using if statements without curly braces
6009	src/pipe/gui/EditTaggedAction.java	58	Local variable 'arcToTransitions' could be declared final
6010	src/pipe/gui/EditTaggedAction.java	59	Found 'DD'-anomaly for variable 'arcNum' (lines '59'-'63').
6011	src/pipe/gui/EditTaggedAction.java	60	Found 'DD'-anomaly for variable 'arc' (lines '60'-'64').
6012	src/pipe/gui/EditTaggedAction.java	63	Found 'DD'-anomaly for variable 'arcNum' (lines '63'-'63').
6013	src/pipe/gui/EditTaggedAction.java	64	Found 'DD'-anomaly for variable 'arc' (lines '64'-'64').
6014	src/pipe/gui/EditTaggedAction.java	66	Avoid using if statements without curly braces
6015	src/pipe/gui/EditTaggedAction.java	76	Avoid excessively long variable names like arcFromTransitions
6016	src/pipe/gui/EditTaggedAction.java	76	Local variable 'arcFromTransitions' could be declared final
6017	src/pipe/gui/EditTaggedAction.java	84	Avoid using if statements without curly braces
6018	src/pipe/gui/EditTaggedAction.java	98	Avoid using if statements without curly braces
6019	src/pipe/gui/EditTaggedRateAction.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
6020	src/pipe/gui/EditTaggedRateAction.java	18	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6021	src/pipe/gui/EditTaggedRateAction.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
6022	src/pipe/gui/EditTaggedRateAction.java	19	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6023	src/pipe/gui/EditTaggedRateAction.java	22	It is a good practice to call super() in a constructor
6024	src/pipe/gui/EditTaggedRateAction.java	22	Parameter 'component' is not assigned and could be declared final
6025	src/pipe/gui/EditTaggedRateAction.java	22	Parameter 'contentPane' is not assigned and could be declared final
6026	src/pipe/gui/EditTaggedRateAction.java	30	Avoid variables with short names like e
6027	src/pipe/gui/EditTaggedRateAction.java	30	Parameter 'e' is not assigned and could be declared final
6028	src/pipe/gui/EditTaggedRateAction.java	32	Local variable 'currentTaggedRate' could be declared final
6029	src/pipe/gui/EditTaggedRateAction.java	33	Found 'DD'-anomaly for variable 'input' (lines '33'-'36').
6030	src/pipe/gui/EditTaggedRateAction.java	46	Local variable 'newRate' could be declared final
6031	src/pipe/gui/EditTaggedRateAction.java	64	System.out.print is used
6032	src/pipe/gui/EditTaggedTokenAction.java	8	Avoid unused imports such as 'pipe.common.dataLayer.Token'
6033	src/pipe/gui/EditTaggedTokenAction.java	8	Avoid unused imports such as 'pipe.common.dataLayer.Token'
6034	src/pipe/gui/EditTaggedTokenAction.java	21	Avoid unused private fields such as 'contentPane'.
6035	src/pipe/gui/EditTaggedTokenAction.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
6036	src/pipe/gui/EditTaggedTokenAction.java	21	Perhaps 'contentPane' could be replaced by a local variable.
6037	src/pipe/gui/EditTaggedTokenAction.java	21	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6038	src/pipe/gui/EditTaggedTokenAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
6039	src/pipe/gui/EditTaggedTokenAction.java	22	Private field 'selected_place' could be made final; it is only initialized in the declaration or constructor.
6040	src/pipe/gui/EditTaggedTokenAction.java	22	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
6041	src/pipe/gui/EditTaggedTokenAction.java	25	It is a good practice to call super() in a constructor
6042	src/pipe/gui/EditTaggedTokenAction.java	25	Parameter 'contentPane' is not assigned and could be declared final
6043	src/pipe/gui/EditTaggedTokenAction.java	25	Parameter 'place' is not assigned and could be declared final
6044	src/pipe/gui/EditTaggedTokenAction.java	32	Avoid variables with short names like e
6045	src/pipe/gui/EditTaggedTokenAction.java	32	Parameter 'e' is not assigned and could be declared final
6046	src/pipe/gui/EditTaggedTokenAction.java	35	Avoid excessively long variable names like currentTagged_place
6047	src/pipe/gui/EditTaggedTokenAction.java	35	Local variable 'currentTagged_place' could be declared final
6048	src/pipe/gui/EditTaggedTokenAction.java	37	Avoid unused local variables such as 'currentMarking'.
6049	src/pipe/gui/EditTaggedTokenAction.java	37	Found 'DU'-anomaly for variable 'currentMarking' (lines '37'-'67').
6050	src/pipe/gui/EditTaggedTokenAction.java	37	Local variable 'currentMarking' could be declared final
6051	src/pipe/gui/EditTaggedTokenAction.java	43	Avoid if (x != y) ..; else ..;
6052	src/pipe/gui/EditTaggedTokenAction.java	57	Avoid empty if statements
6053	src/pipe/gui/EditTimedAction.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
6054	src/pipe/gui/EditTimedAction.java	21	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6055	src/pipe/gui/EditTimedAction.java	24	It is a good practice to call super() in a constructor
6056	src/pipe/gui/EditTimedAction.java	24	Parameter 'component' is not assigned and could be declared final
6057	src/pipe/gui/EditTimedAction.java	30	Avoid variables with short names like e
6058	src/pipe/gui/EditTimedAction.java	30	Parameter 'e' is not assigned and could be declared final
6059	src/pipe/gui/EditTimedAction.java	32	Local variable 'currentTimed' could be declared final
6060	src/pipe/gui/EditTokenAction.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
6061	src/pipe/gui/EditTokenAction.java	21	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6062	src/pipe/gui/EditTokenAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
6063	src/pipe/gui/EditTokenAction.java	22	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6064	src/pipe/gui/EditTokenAction.java	24	It is a good practice to call super() in a constructor
6065	src/pipe/gui/EditTokenAction.java	24	Parameter 'contentPane' is not assigned and could be declared final
6066	src/pipe/gui/EditTokenAction.java	24	Parameter 'place' is not assigned and could be declared final
6067	src/pipe/gui/EditTokenAction.java	31	Avoid variables with short names like e
6068	src/pipe/gui/EditTokenAction.java	31	Parameter 'e' is not assigned and could be declared final
6069	src/pipe/gui/EditTokenAction.java	33	Local variable 'currentMarking' could be declared final
6070	src/pipe/gui/EditTokenAction.java	34	Local variable 'input' could be declared final
6071	src/pipe/gui/EditTokenAction.java	43	Local variable 'newMarking' could be declared final
6072	src/pipe/gui/EditTokenAction.java	58	System.out.print is used
6073	src/pipe/gui/EditWeightAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
6074	src/pipe/gui/EditWeightAction.java	22	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6075	src/pipe/gui/EditWeightAction.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
6076	src/pipe/gui/EditWeightAction.java	23	Private field 'myArc' could be made final; it is only initialized in the declaration or constructor.
6077	src/pipe/gui/EditWeightAction.java	25	Avoid variables with short names like a
6078	src/pipe/gui/EditWeightAction.java	25	It is a good practice to call super() in a constructor
6079	src/pipe/gui/EditWeightAction.java	25	Parameter 'a' is not assigned and could be declared final
6080	src/pipe/gui/EditWeightAction.java	25	Parameter 'contentPane' is not assigned and could be declared final
6081	src/pipe/gui/EditWeightAction.java	31	Avoid variables with short names like e
6082	src/pipe/gui/EditWeightAction.java	31	Parameter 'e' is not assigned and could be declared final
6083	src/pipe/gui/EditWeightAction.java	33	Local variable 'currentWeighting' could be declared final
6084	src/pipe/gui/EditWeightAction.java	34	Local variable 'input' could be declared final
6085	src/pipe/gui/EditWeightAction.java	42	Local variable 'newWeighting' could be declared final
6086	src/pipe/gui/EditWeightAction.java	61	Avoid printStackTrace(); use a logger call instead.
6087	src/pipe/gui/Export.java	39	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
6088	src/pipe/gui/Export.java	39	The class 'Export' has a Cyclomatic Complexity of 6 (Highest = 14).
6089	src/pipe/gui/Export.java	44	Avoid variables with short names like g
6090	src/pipe/gui/Export.java	44	Parameter 'filename' is not assigned and could be declared final
6091	src/pipe/gui/Export.java	44	Parameter 'g' is not assigned and could be declared final
6092	src/pipe/gui/Export.java	46	Local variable 'flavour' could be declared final
6093	src/pipe/gui/Export.java	48	Local variable 'psMimeType' could be declared final
6094	src/pipe/gui/Export.java	51	Local variable 'factories' could be declared final
6095	src/pipe/gui/Export.java	52	Avoid throwing raw exception types.
6096	src/pipe/gui/Export.java	52	Avoid using if statements without curly braces
6097	src/pipe/gui/Export.java	54	Avoid variables with short names like f
6098	src/pipe/gui/Export.java	54	Local variable 'f' could be declared final
6099	src/pipe/gui/Export.java	64	Avoid variables with short names like g
6100	src/pipe/gui/Export.java	64	Parameter 'filename' is not assigned and could be declared final
6101	src/pipe/gui/Export.java	64	Parameter 'g' is not assigned and could be declared final
6102	src/pipe/gui/Export.java	65	Avoid variables with short names like i
6103	src/pipe/gui/Export.java	65	Local variable 'i' could be declared final
6104	src/pipe/gui/Export.java	65	The String literal "png" appears 4 times in this file; the first occurrence is on line 65
6105	src/pipe/gui/Export.java	66	Avoid throwing raw exception types.
6106	src/pipe/gui/Export.java	66	Avoid using if statements without curly braces
6107	src/pipe/gui/Export.java	68	Avoid variables with short names like f
6108	src/pipe/gui/Export.java	74	Parameter 'g' is not assigned and could be declared final
6109	src/pipe/gui/Export.java	79	Avoid using if statements without curly braces
6110	src/pipe/gui/Export.java	101	The method 'exportGuiView' has a Cyclomatic Complexity of 14.
6111	src/pipe/gui/Export.java	102	Found 'DU'-anomaly for variable 'gridEnabled' (lines '102'-'153').
6112	src/pipe/gui/Export.java	103	Found 'DD'-anomaly for variable 'filename' (lines '103'-'108').
6113	src/pipe/gui/Export.java	103	Found 'DD'-anomaly for variable 'filename' (lines '103'-'129').
6114	src/pipe/gui/Export.java	103	Found 'DD'-anomaly for variable 'filename' (lines '103'-'133').
6115	src/pipe/gui/Export.java	103	Found 'DU'-anomaly for variable 'filename' (lines '103'-'153').
6116	src/pipe/gui/Export.java	105	A method should have only one exit point, and that should be the last statement in the method
6117	src/pipe/gui/Export.java	105	Avoid using if statements without curly braces
6118	src/pipe/gui/Export.java	114	A switch with less than 3 branches is inefficient, use a if statement instead.
6119	src/pipe/gui/Export.java	114	Switch statements should have a default label
6120	src/pipe/gui/Export.java	115	Prefer StringBuffer over += for concatenating strings
6121	src/pipe/gui/Export.java	116	Prefer StringBuffer over += for concatenating strings
6122	src/pipe/gui/Export.java	124	Avoid using if statements without curly braces
6123	src/pipe/gui/Export.java	127	Switch statements should have a default label
6124	src/pipe/gui/Export.java	152	Avoid unnecessary return statements
6125	src/pipe/gui/ExtFileManager.java	21	Avoid unnecessary constructors - the compiler will generate these for you
6126	src/pipe/gui/ExtFileManager.java	21	Document empty constructor
6127	src/pipe/gui/ExtFileManager.java	25	Parameter 'className' is not assigned and could be declared final
6128	src/pipe/gui/ExtFileManager.java	27	Avoid variables with short names like c
6129	src/pipe/gui/ExtFileManager.java	27	Found 'DD'-anomaly for variable 'c' (lines '27'-'30').
6130	src/pipe/gui/ExtFileManager.java	34	System.out.print is used
6131	src/pipe/gui/ExtFileManager.java	39	Parameter 'classFile' is not assigned and could be declared final
6132	src/pipe/gui/ExtFileManager.java	41	Found 'DD'-anomaly for variable 'myClass' (lines '41'-'51').
6133	src/pipe/gui/ExtFileManager.java	42	Local variable 'path' could be declared final
6134	src/pipe/gui/ExtFileManager.java	48	System.out.print is used
6135	src/pipe/gui/ExtFileManager.java	55	System.out.print is used
6136	src/pipe/gui/ExtFileManager.java	58	Found 'DU'-anomaly for variable 'myPaths' (lines '58'-'61').
6137	src/pipe/gui/ExtFileManager.java	58	Local variable 'myPaths' could be declared final
6138	src/pipe/gui/ExtFileManager.java	63	Parameter 'classURL' is not assigned and could be declared final
6139	src/pipe/gui/ExtFileManager.java	65	Found 'DD'-anomaly for variable 'myObj' (lines '65'-'69').
6140	src/pipe/gui/ExtFileManager.java	73	System.out.print is used
6141	src/pipe/gui/ExtFileManager.java	78	Avoid variables with short names like p
6142	src/pipe/gui/ExtFileManager.java	78	Parameter 'p' is not assigned and could be declared final
6143	src/pipe/gui/ExtFileManager.java	84	Local variable 'pathURLs' could be declared final
6144	src/pipe/gui/ExtFileManager.java	89	System.out.print is used
6145	src/pipe/gui/ExtFileManager.java	94	Parameter 'urls' is not assigned and could be declared final
6146	src/pipe/gui/ExtFileManager.java	94	The user-supplied array 'urls' is stored directly.
6147	src/pipe/gui/ExtFileManager.java	94	The user-supplied array 'urls' is stored directly.
6148	src/pipe/gui/ExtFileManager.java	94	The user-supplied array 'urls' is stored directly.
6149	src/pipe/gui/ExtFileManager.java	96	Singleton is not thread safe
6150	src/pipe/gui/ExtFileManager.java	109	Local variable 'rootPath' could be declared final
6151	src/pipe/gui/ExtFileManager.java	118	Local variable 'url' could be declared final
6152	src/pipe/gui/ExtFileManager.java	124	Found 'DU'-anomaly for variable 'dataDir' (lines '124'-'137').
6153	src/pipe/gui/ExtFileManager.java	128	A method should have only one exit point, and that should be the last statement in the method
6154	src/pipe/gui/ExtFileManager.java	132	A method should have only one exit point, and that should be the last statement in the method
6155	src/pipe/gui/ExtFileManager.java	135	Avoid using if statements without curly braces
6156	src/pipe/gui/ExtensionFilter.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
6157	src/pipe/gui/ExtensionFilter.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
6158	src/pipe/gui/ExtensionFilter.java	19	It is a good practice to call super() in a constructor
6159	src/pipe/gui/ExtensionFilter.java	19	Parameter 'desc' is not assigned and could be declared final
6160	src/pipe/gui/ExtensionFilter.java	19	Parameter 'ext' is not assigned and could be declared final
6161	src/pipe/gui/ExtensionFilter.java	20	When doing a String.toLowerCase()/toUpperCase() call, use a Locale
6162	src/pipe/gui/ExtensionFilter.java	24	Avoid variables with short names like f
6163	src/pipe/gui/ExtensionFilter.java	24	Parameter 'f' is not assigned and could be declared final
6164	src/pipe/gui/FireTaggedTokenAction.java	4	Avoid unused imports such as 'java.awt.event.ActionEvent'
6165	src/pipe/gui/FireTaggedTokenAction.java	4	Avoid unused imports such as 'java.awt.event.ActionEvent'
6166	src/pipe/gui/FireTaggedTokenAction.java	8	Avoid unused imports such as 'javax.swing.AbstractAction'
6167	src/pipe/gui/FireTaggedTokenAction.java	8	Avoid unused imports such as 'javax.swing.AbstractAction'
6168	src/pipe/gui/FireTaggedTokenAction.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
6169	src/pipe/gui/FireTaggedTokenAction.java	15	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6170	src/pipe/gui/FireTaggedTokenAction.java	18	It is a good practice to call super() in a constructor
6171	src/pipe/gui/FireTaggedTokenAction.java	18	Parameter 'component' is not assigned and could be declared final
6172	src/pipe/gui/FireTaggedTokenAction.java	45	Avoid variables with short names like e
6173	src/pipe/gui/FireTaggedTokenAction.java	45	Parameter 'e' is not assigned and could be declared final
6174	src/pipe/gui/GetIndexAction.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
6175	src/pipe/gui/GetIndexAction.java	20	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6176	src/pipe/gui/GetIndexAction.java	21	Avoid variables with short names like mp
6177	src/pipe/gui/GetIndexAction.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
6178	src/pipe/gui/GetIndexAction.java	21	Private field 'mp' could be made final; it is only initialized in the declaration or constructor.
6179	src/pipe/gui/GetIndexAction.java	23	It is a good practice to call super() in a constructor
6180	src/pipe/gui/GetIndexAction.java	23	Parameter 'component' is not assigned and could be declared final
6181	src/pipe/gui/GetIndexAction.java	23	Parameter 'mousepos' is not assigned and could be declared final
6182	src/pipe/gui/GetIndexAction.java	28	Parameter 'arg0' is not assigned and could be declared final
6183	src/pipe/gui/GetIndexAction.java	29	System.out.print is used
6184	src/pipe/gui/GetIndexAction.java	30	System.out.print is used
6185	src/pipe/gui/GetIndexAction.java	31	System.out.print is used
6186	src/pipe/gui/Grid.java	21	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
6187	src/pipe/gui/Grid.java	23	Variables that are final and static should be in all caps.
6188	src/pipe/gui/Grid.java	25	It is somewhat confusing to have a field name with the same name as a method
6189	src/pipe/gui/Grid.java	60	Parameter 'spacing' is not assigned and could be declared final
6190	src/pipe/gui/Grid.java	74	Parameter 'parent' is not assigned and could be declared final
6191	src/pipe/gui/Grid.java	82	Avoid variables with short names like g
6192	src/pipe/gui/Grid.java	82	Parameter 'g' is not assigned and could be declared final
6193	src/pipe/gui/Grid.java	83	Local variable 'g2d' could be declared final
6194	src/pipe/gui/Grid.java	89	Avoid variables with short names like x
6195	src/pipe/gui/Grid.java	89	Parameter 'x' is not assigned and could be declared final
6196	src/pipe/gui/Grid.java	90	A method should have only one exit point, and that should be the last statement in the method
6197	src/pipe/gui/Grid.java	90	Avoid using if statements without curly braces
6198	src/pipe/gui/Grid.java	95	Avoid variables with short names like y
6199	src/pipe/gui/Grid.java	95	Parameter 'y' is not assigned and could be declared final
6200	src/pipe/gui/Grid.java	96	A method should have only one exit point, and that should be the last statement in the method
6201	src/pipe/gui/Grid.java	96	Avoid using if statements without curly braces
6202	src/pipe/gui/Grid.java	102	A method should have only one exit point, and that should be the last statement in the method
6203	src/pipe/gui/Grid.java	102	Avoid using if...else statements without curly braces
6204	src/pipe/gui/Grid.java	104	Avoid using if...else statements without curly braces
6205	src/pipe/gui/GuiAction.java	23	Abstract classes should be named AbstractXXX
6206	src/pipe/gui/GuiAction.java	24	Parameter 'keystroke' is not assigned and could be declared final
6207	src/pipe/gui/GuiAction.java	24	Parameter 'name' is not assigned and could be declared final
6208	src/pipe/gui/GuiAction.java	24	Parameter 'tooltip' is not assigned and could be declared final
6209	src/pipe/gui/GuiAction.java	26	Local variable 'iconURL' could be declared final
6210	src/pipe/gui/GuiAction.java	32	Avoid using if statements without curly braces
6211	src/pipe/gui/GuiAction.java	35	Avoid using if statements without curly braces
6212	src/pipe/gui/GuiAction.java	37	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
6213	src/pipe/gui/GuiAction.java	44	Parameter 'selected' is not assigned and could be declared final
6214	src/pipe/gui/GuiAction.java	45	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
6215	src/pipe/gui/GuiFrame.java	1	A high number of imports can indicate a high degree of coupling within an object.
6216	src/pipe/gui/GuiFrame.java	52	Avoid unused imports such as 'pipe.modules.clientCommon.HTMLPane'
6217	src/pipe/gui/GuiFrame.java	52	Avoid unused imports such as 'pipe.modules.clientCommon.HTMLPane'
6218	src/pipe/gui/GuiFrame.java	71	Avoid really long classes.
6219	src/pipe/gui/GuiFrame.java	71	This class has too many methods, consider refactoring it.
6220	src/pipe/gui/GuiFrame.java	76	Found non-transient, non-static member. Please mark as transient or provide accessors.
6221	src/pipe/gui/GuiFrame.java	78	Found non-transient, non-static member. Please mark as transient or provide accessors.
6222	src/pipe/gui/GuiFrame.java	78	Private field 'frameTitle' could be made final; it is only initialized in the declaration or constructor.
6223	src/pipe/gui/GuiFrame.java	79	Found non-transient, non-static member. Please mark as transient or provide accessors.
6224	src/pipe/gui/GuiFrame.java	80	Found non-transient, non-static member. Please mark as transient or provide accessors.
6225	src/pipe/gui/GuiFrame.java	81	Found non-transient, non-static member. Please mark as transient or provide accessors.
6226	src/pipe/gui/GuiFrame.java	85	Private field 'statusBar' could be made final; it is only initialized in the declaration or constructor.
6227	src/pipe/gui/GuiFrame.java	87	Private field 'actions' could be made final; it is only initialized in the declaration or constructor.
6228	src/pipe/gui/GuiFrame.java	90	It is a good practice to call super() in a constructor
6229	src/pipe/gui/GuiFrame.java	90	Parameter 'title' is not assigned and could be declared final
6230	src/pipe/gui/GuiFrame.java	93	Overridable method 'setTitle' called during object construction
6231	src/pipe/gui/GuiFrame.java	96	Local variable 'osName' could be declared final
6232	src/pipe/gui/GuiFrame.java	108	System.out.print is used
6233	src/pipe/gui/GuiFrame.java	110	System.out.print is used
6234	src/pipe/gui/GuiFrame.java	112	System.out.print is used
6235	src/pipe/gui/GuiFrame.java	114	System.out.print is used
6236	src/pipe/gui/GuiFrame.java	116	System.out.print is used
6237	src/pipe/gui/GuiFrame.java	125	Local variable 'screenSize' could be declared final
6238	src/pipe/gui/GuiFrame.java	135	Overridable method 'enableDrawingActions' called during object construction
6239	src/pipe/gui/GuiFrame.java	139	Overridable method 'setMode' called during object construction
6240	src/pipe/gui/GuiFrame.java	140	The String literal "Draw Select" appears 6 times in this file; the first occurrence is on line 140
6241	src/pipe/gui/GuiFrame.java	156	The String literal "New" appears 5 times in this file; the first occurrence is on line 156
6242	src/pipe/gui/GuiFrame.java	157	The String literal "Open" appears 6 times in this file; the first occurrence is on line 157
6243	src/pipe/gui/GuiFrame.java	158	The String literal "Close" appears 5 times in this file; the first occurrence is on line 158
6244	src/pipe/gui/GuiFrame.java	159	The String literal "Save" appears 7 times in this file; the first occurrence is on line 159
6245	src/pipe/gui/GuiFrame.java	177	Local variable 'select' could be declared final
6246	src/pipe/gui/GuiFrame.java	178	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
6247	src/pipe/gui/GuiFrame.java	189	Found 'DD'-anomaly for variable 'examplesDirURL' (lines '189'-'194').
6248	src/pipe/gui/GuiFrame.java	189	Found 'DD'-anomaly for variable 'examplesDirURL' (lines '189'-'194').
6249	src/pipe/gui/GuiFrame.java	190	Found 'DD'-anomaly for variable 'nets' (lines '190'-'217').
6250	src/pipe/gui/GuiFrame.java	190	Found 'DD'-anomaly for variable 'nets' (lines '190'-'217').
6251	src/pipe/gui/GuiFrame.java	191	Found 'DD'-anomaly for variable 'examplesDir' (lines '191'-'216').
6252	src/pipe/gui/GuiFrame.java	191	Found 'DD'-anomaly for variable 'examplesDir' (lines '191'-'216').
6253	src/pipe/gui/GuiFrame.java	208	Local variable 'index' could be declared final
6254	src/pipe/gui/GuiFrame.java	208	String.indexOf(char) is faster than String.indexOf(String).
6255	src/pipe/gui/GuiFrame.java	211	Avoid variables with short names like sb
6256	src/pipe/gui/GuiFrame.java	211	Local variable 'sb' could be declared final
6257	src/pipe/gui/GuiFrame.java	221	Parameter 'one' is not assigned and could be declared final
6258	src/pipe/gui/GuiFrame.java	221	Parameter 'two' is not assigned and could be declared final
6259	src/pipe/gui/GuiFrame.java	230	Avoid variables with short names like k
6260	src/pipe/gui/GuiFrame.java	231	Avoid using for statements without curly braces
6261	src/pipe/gui/GuiFrame.java	232	Avoid using if statements without curly braces
6262	src/pipe/gui/GuiFrame.java	233	Avoid instantiating new objects inside loops
6263	src/pipe/gui/GuiFrame.java	237	Avoid printStackTrace(); use a logger call instead.
6264	src/pipe/gui/GuiFrame.java	241	Avoid really long methods.
6265	src/pipe/gui/GuiFrame.java	350	Parameter 'zoomMenu' is not assigned and could be declared final
6266	src/pipe/gui/GuiFrame.java	353	Avoid instantiating new objects inside loops
6267	src/pipe/gui/GuiFrame.java	358	Parameter 'action' is not assigned and could be declared final
6268	src/pipe/gui/GuiFrame.java	361	Avoid using if statements without curly braces
6269	src/pipe/gui/GuiFrame.java	442	Avoid variables with short names like b
6270	src/pipe/gui/GuiFrame.java	508	Avoid variables with short names like e
6271	src/pipe/gui/GuiFrame.java	513	Avoid if (x != y) ..; else ..;
6272	src/pipe/gui/GuiFrame.java	532	Avoid variables with short names like e
6273	src/pipe/gui/GuiFrame.java	544	Avoid using if statements without curly braces
6274	src/pipe/gui/GuiFrame.java	549	Avoid using if statements without curly braces
6275	src/pipe/gui/GuiFrame.java	551	Avoid if (x != y) ..; else ..;
6276	src/pipe/gui/GuiFrame.java	555	Found 'DD'-anomaly for variable 'path' (lines '555'-'556').
6277	src/pipe/gui/GuiFrame.java	555	Found 'DD'-anomaly for variable 'path' (lines '555'-'557').
6278	src/pipe/gui/GuiFrame.java	556	Avoid if (x != y) ..; else ..;
6279	src/pipe/gui/GuiFrame.java	556	Avoid using if...else statements without curly braces
6280	src/pipe/gui/GuiFrame.java	557	Avoid using if...else statements without curly braces
6281	src/pipe/gui/GuiFrame.java	559	Avoid using if statements without curly braces
6282	src/pipe/gui/GuiFrame.java	588	Found 'DD'-anomaly for variable 'name' (lines '588'-'598').
6283	src/pipe/gui/GuiFrame.java	588	Found 'DD'-anomaly for variable 'name' (lines '588'-'609').
6284	src/pipe/gui/GuiFrame.java	609	Found 'DU'-anomaly for variable 'name' (lines '609'-'633').
6285	src/pipe/gui/GuiFrame.java	613	Avoid printStackTrace(); use a logger call instead.
6286	src/pipe/gui/GuiFrame.java	645	Switch statements should have a default label
6287	src/pipe/gui/GuiFrame.java	649	A method should have only one exit point, and that should be the last statement in the method
6288	src/pipe/gui/GuiFrame.java	659	A method should have only one exit point, and that should be the last statement in the method
6289	src/pipe/gui/GuiFrame.java	659	Avoid unnecessary comparisons in boolean expressions
6290	src/pipe/gui/GuiFrame.java	689	Found 'DU'-anomaly for variable 'currentXNoZoom' (lines '689'-'752').
6291	src/pipe/gui/GuiFrame.java	691	Found 'DU'-anomaly for variable 'currentYNoZoom' (lines '691'-'752').
6292	src/pipe/gui/GuiFrame.java	694	Found 'DD'-anomaly for variable 'selection' (lines '694'-'710').
6293	src/pipe/gui/GuiFrame.java	694	Found 'DD'-anomaly for variable 'selection' (lines '694'-'713').
6294	src/pipe/gui/GuiFrame.java	694	Found 'DD'-anomaly for variable 'strToTest' (lines '694'-'716').
6295	src/pipe/gui/GuiFrame.java	694	Found 'DU'-anomaly for variable 'selection' (lines '694'-'752').
6296	src/pipe/gui/GuiFrame.java	694	Found 'DU'-anomaly for variable 'strToTest' (lines '694'-'752').
6297	src/pipe/gui/GuiFrame.java	696	Position literals first in String comparisons
6298	src/pipe/gui/GuiFrame.java	703	Position literals first in String comparisons
6299	src/pipe/gui/GuiFrame.java	709	Position literals first in String comparisons
6300	src/pipe/gui/GuiFrame.java	710	Found 'DD'-anomaly for variable 'selection' (lines '710'-'713').
6301	src/pipe/gui/GuiFrame.java	717	Avoid if (x != y) ..; else ..;
6302	src/pipe/gui/GuiFrame.java	721	A method should have only one exit point, and that should be the last statement in the method
6303	src/pipe/gui/GuiFrame.java	721	Avoid using if...else statements without curly braces
6304	src/pipe/gui/GuiFrame.java	723	Avoid using if...else statements without curly braces
6305	src/pipe/gui/GuiFrame.java	728	Avoid using if...else statements without curly braces
6306	src/pipe/gui/GuiFrame.java	757	Found 'DD'-anomaly for variable 'toTest' (lines '757'-'760').
6307	src/pipe/gui/GuiFrame.java	766	A method should have only one exit point, and that should be the last statement in the method
6308	src/pipe/gui/GuiFrame.java	775	The class 'FileAction' has a Cyclomatic Complexity of 10 (Highest = 17).
6309	src/pipe/gui/GuiFrame.java	781	The method 'actionPerformed' has a Cyclomatic Complexity of 17.
6310	src/pipe/gui/GuiFrame.java	783	Position literals first in String comparisons
6311	src/pipe/gui/GuiFrame.java	784	Position literals first in String comparisons
6312	src/pipe/gui/GuiFrame.java	796	System.exit() should not be used in J2EE/JEE apps
6313	src/pipe/gui/GuiFrame.java	809	Private field 'file' could be made final; it is only initialized in the declaration or constructor.
6314	src/pipe/gui/GuiFrame.java	865	Assigning an Object to null is a code smell. Consider refactoring.
6315	src/pipe/gui/GuiFrame.java	878	Private field 'typeID' could be made final; it is only initialized in the declaration or constructor.
6316	src/pipe/gui/GuiFrame.java	890	Avoid unused local variables such as 'result'.
6317	src/pipe/gui/GuiFrame.java	890	Found 'DU'-anomaly for variable 'result' (lines '890'-'891').
6318	src/pipe/gui/GuiFrame.java	895	The class 'AnimateAction' has a Cyclomatic Complexity of 8 (Highest = 13).
6319	src/pipe/gui/GuiFrame.java	904	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
6320	src/pipe/gui/GuiFrame.java	905	A method should have only one exit point, and that should be the last statement in the method
6321	src/pipe/gui/GuiFrame.java	912	Avoid excessively long variable names like goingIntoAnimation
6322	src/pipe/gui/GuiFrame.java	921	Avoid if (x != y) ..; else ..;
6323	src/pipe/gui/GuiFrame.java	940	An empty statement (semicolon) not part of a loop
6324	src/pipe/gui/GuiFrame.java	940	Avoid empty if statements
6325	src/pipe/gui/GuiFrame.java	991	This statement may have some unnecessary parentheses
6326	src/pipe/gui/GuiFrame.java	993	No need to call String.valueOf to append to a string.
6327	src/pipe/gui/GuiFrame.java	1007	Found 'DD'-anomaly for variable 'nextAction' (lines '1,007'-'1,007').
6328	src/pipe/gui/GuiFrame.java	1007	Found 'DD'-anomaly for variable 'nextAction' (lines '1,007'-'1,009').
6329	src/pipe/gui/GuiFrame.java	1007	Found 'DU'-anomaly for variable 'nextAction' (lines '1,007'-'1,015').
6330	src/pipe/gui/GuiFrame.java	1010	Use equals() to compare object references.
6331	src/pipe/gui/GuiFrame.java	1070	System.exit() should not be used in J2EE/JEE apps
6332	src/pipe/gui/GuiView.java	32	This class has too many methods, consider refactoring it.
6333	src/pipe/gui/GuiView.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
6334	src/pipe/gui/GuiView.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
6335	src/pipe/gui/GuiView.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
6336	src/pipe/gui/GuiView.java	37	Private field 'animationHandler' could be made final; it is only initialized in the declaration or constructor.
6337	src/pipe/gui/GuiView.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
6338	src/pipe/gui/GuiView.java	38	Use explicit scoping instead of the default package private level
6339	src/pipe/gui/GuiView.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
6340	src/pipe/gui/GuiView.java	39	Private field 'selection' could be made final; it is only initialized in the declaration or constructor.
6341	src/pipe/gui/GuiView.java	40	Private field 'zoomControl' could be made final; it is only initialized in the declaration or constructor.
6342	src/pipe/gui/GuiView.java	42	It is a good practice to call super() in a constructor
6343	src/pipe/gui/GuiView.java	50	Local variable 'handler' could be declared final
6344	src/pipe/gui/GuiView.java	60	Parameter 'newObject' is not assigned and could be declared final
6345	src/pipe/gui/GuiView.java	64	Avoid variables with short names like l
6346	src/pipe/gui/GuiView.java	64	Local variable 'l' could be declared final
6347	src/pipe/gui/GuiView.java	69	Local variable 'placeHandler' could be declared final
6348	src/pipe/gui/GuiView.java	77	Local variable 'transitionHandler' could be declared final
6349	src/pipe/gui/GuiView.java	87	Local variable 'arcHandler' could be declared final
6350	src/pipe/gui/GuiView.java	91	Deeply nested if..then statements are hard to read
6351	src/pipe/gui/GuiView.java	106	Avoid variables with short names like o
6352	src/pipe/gui/GuiView.java	106	Parameter 'diffObj' is not assigned and could be declared final
6353	src/pipe/gui/GuiView.java	106	Parameter 'o' is not assigned and could be declared final
6354	src/pipe/gui/GuiView.java	120	Avoid variables with short names like g
6355	src/pipe/gui/GuiView.java	120	Parameter 'g' is not assigned and could be declared final
6356	src/pipe/gui/GuiView.java	120	Parameter 'pageFormat' is not assigned and could be declared final
6357	src/pipe/gui/GuiView.java	121	Avoid using if statements without curly braces
6358	src/pipe/gui/GuiView.java	122	A method should have only one exit point, and that should be the last statement in the method
6359	src/pipe/gui/GuiView.java	137	Avoid variables with short names like g
6360	src/pipe/gui/GuiView.java	138	Avoid variables with short names like g2
6361	src/pipe/gui/GuiView.java	154	Avoid using if statements without curly braces
6362	src/pipe/gui/GuiView.java	158	Avoid using if statements without curly braces
6363	src/pipe/gui/GuiView.java	159	Avoid using if statements without curly braces
6364	src/pipe/gui/GuiView.java	170	Avoid using if statements without curly braces
6365	src/pipe/gui/GuiView.java	191	Avoid using if...else statements without curly braces
6366	src/pipe/gui/GuiView.java	193	Avoid using if...else statements without curly braces
6367	src/pipe/gui/GuiView.java	195	Avoid using if...else statements without curly braces
6368	src/pipe/gui/GuiView.java	202	Position literals first in String comparisons
6369	src/pipe/gui/GuiView.java	203	Avoid using if...else statements without curly braces
6370	src/pipe/gui/GuiView.java	204	Position literals first in String comparisons
6371	src/pipe/gui/GuiView.java	205	Avoid using if...else statements without curly braces
6372	src/pipe/gui/GuiView.java	206	Position literals first in String comparisons
6373	src/pipe/gui/GuiView.java	228	Found 'DU'-anomaly for variable 'start' (lines '228'-'269').
6374	src/pipe/gui/GuiView.java	229	Switch statements should have a default label
6375	src/pipe/gui/GuiView.java	308	Avoid using for statements without curly braces
6376	src/pipe/gui/HelpBox.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
6377	src/pipe/gui/HelpBox.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
6378	src/pipe/gui/HelpBox.java	37	Avoid using implementation types like 'LinkedList'; use the interface instead
6379	src/pipe/gui/HelpBox.java	37	Avoid using implementation types like 'LinkedList'; use the interface instead
6380	src/pipe/gui/HelpBox.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
6381	src/pipe/gui/HelpBox.java	37	Private field 'history' could be made final; it is only initialized in the declaration or constructor.
6382	src/pipe/gui/HelpBox.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
6383	src/pipe/gui/HelpBox.java	39	Private field 'filename' could be made final; it is only initialized in the declaration or constructor.
6384	src/pipe/gui/HelpBox.java	41	Parameter 'filename' is not assigned and could be declared final
6385	src/pipe/gui/HelpBox.java	41	Parameter 'keystroke' is not assigned and could be declared final
6386	src/pipe/gui/HelpBox.java	41	Parameter 'name' is not assigned and could be declared final
6387	src/pipe/gui/HelpBox.java	41	Parameter 'tooltip' is not assigned and could be declared final
6388	src/pipe/gui/HelpBox.java	47	Parameter 'filename' is not assigned and could be declared final
6389	src/pipe/gui/HelpBox.java	50	Local variable 'contentPane' could be declared final
6390	src/pipe/gui/HelpBox.java	58	Local variable 'scroller' could be declared final
6391	src/pipe/gui/HelpBox.java	77	System.out.print is used
6392	src/pipe/gui/HelpBox.java	78	System.out.print is used
6393	src/pipe/gui/HelpBox.java	85	Avoid using if statements without curly braces
6394	src/pipe/gui/HelpBox.java	87	System.out.print is used
6395	src/pipe/gui/HelpBox.java	91	Avoid variables with short names like e
6396	src/pipe/gui/HelpBox.java	92	Avoid variables with short names like s
6397	src/pipe/gui/HelpBox.java	92	Local variable 's' could be declared final
6398	src/pipe/gui/HelpBox.java	93	Use equals() to compare strings instead of '==' or '!='
6399	src/pipe/gui/HelpBox.java	102	Avoid variables with short names like e
6400	src/pipe/gui/HelpBox.java	103	Avoid using if statements without curly braces
6401	src/pipe/gui/LabelAction.java	16	Avoid unused private fields such as 'label'.
6402	src/pipe/gui/LabelAction.java	17	Avoid unused private fields such as 'contentPane'.
6403	src/pipe/gui/LabelAction.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
6404	src/pipe/gui/LabelAction.java	17	Perhaps 'contentPane' could be replaced by a local variable.
6405	src/pipe/gui/LabelAction.java	17	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6406	src/pipe/gui/LabelAction.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
6407	src/pipe/gui/LabelAction.java	18	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6408	src/pipe/gui/LabelAction.java	21	It is a good practice to call super() in a constructor
6409	src/pipe/gui/LabelAction.java	21	Parameter 'component' is not assigned and could be declared final
6410	src/pipe/gui/LabelAction.java	21	Parameter 'contentPane' is not assigned and could be declared final
6411	src/pipe/gui/LabelAction.java	27	Avoid variables with short names like e
6412	src/pipe/gui/LabelAction.java	27	Parameter 'e' is not assigned and could be declared final
6413	src/pipe/gui/LabelAction.java	30	Found 'DD'-anomaly for variable 'text' (lines '30'-'33').
6414	src/pipe/gui/LabelAction.java	31	Local variable 'currentName' could be declared final
6415	src/pipe/gui/LabelAction.java	32	Avoid using if statements without curly braces
6416	src/pipe/gui/LabelAction.java	34	Local variable 'input' could be declared final
6417	src/pipe/gui/LabelAction.java	35	Avoid using if statements without curly braces
6418	src/pipe/gui/ModuleClassContainer.java	12	Found non-transient, non-static member. Please mark as transient or provide accessors.
6419	src/pipe/gui/ModuleClassContainer.java	13	Avoid unused private fields such as 'methods'.
6420	src/pipe/gui/ModuleClassContainer.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
6421	src/pipe/gui/ModuleClassContainer.java	14	Private field 'thisClass' could be made final; it is only initialized in the declaration or constructor.
6422	src/pipe/gui/ModuleClassContainer.java	19	Avoid variables with short names like cl
6423	src/pipe/gui/ModuleClassContainer.java	19	Parameter 'cl' is not assigned and could be declared final
6424	src/pipe/gui/ModuleClassContainer.java	24	Avoid variables with short names like ct
6425	src/pipe/gui/ModuleClassContainer.java	24	Local variable 'ct' could be declared final
6426	src/pipe/gui/ModuleClassContainer.java	25	Local variable 'moduleObj' could be declared final
6427	src/pipe/gui/ModuleClassContainer.java	28	Local variable 'meth' could be declared final
6428	src/pipe/gui/ModuleClassContainer.java	31	A catch statement should never catch throwable since it includes errors.
6429	src/pipe/gui/ModuleClassContainer.java	33	System.out.print is used
6430	src/pipe/gui/ModuleLoader.java	17	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
6431	src/pipe/gui/ModuleLoader.java	19	Avoid unnecessary constructors - the compiler will generate these for you
6432	src/pipe/gui/ModuleLoader.java	19	Document empty constructor
6433	src/pipe/gui/ModuleLoader.java	23	Avoid reassigning parameters such as 'modFile'
6434	src/pipe/gui/ModuleLoader.java	23	Avoid reassigning parameters such as 'modFile'
6435	src/pipe/gui/ModuleLoader.java	25	Found 'DD'-anomaly for variable 'modClass' (lines '25'-'36').
6436	src/pipe/gui/ModuleLoader.java	28	Local variable 'className' could be declared final
6437	src/pipe/gui/ModuleLoader.java	31	Avoid using while statements without curly braces
6438	src/pipe/gui/ModuleLoader.java	39	A method should have only one exit point, and that should be the last statement in the method
6439	src/pipe/gui/ModuleLoader.java	42	Avoid empty catch blocks
6440	src/pipe/gui/ModuleLoader.java	49	Parameter 'modFile' is not assigned and could be declared final
6441	src/pipe/gui/ModuleLoader.java	51	Found 'DD'-anomaly for variable 'modClass' (lines '51'-'57').
6442	src/pipe/gui/ModuleLoader.java	60	System.out.print is used
6443	src/pipe/gui/ModuleLoader.java	61	A method should have only one exit point, and that should be the last statement in the method
6444	src/pipe/gui/ModuleLoader.java	64	Avoid empty catch blocks
6445	src/pipe/gui/ModuleLoader.java	71	Parameter 'modClass' is not assigned and could be declared final
6446	src/pipe/gui/ModuleLoader.java	73	Local variable 'interfaces' could be declared final
6447	src/pipe/gui/ModuleLoader.java	76	Use equals() to compare strings instead of '==' or '!='
6448	src/pipe/gui/ModuleLoader.java	78	A method should have only one exit point, and that should be the last statement in the method
6449	src/pipe/gui/ModuleLoader.java	84	Parameter 'moduleFile' is not assigned and could be declared final
6450	src/pipe/gui/ModuleLoader.java	89	Found 'DU'-anomaly for variable 'filename' (lines '89'-'106').
6451	src/pipe/gui/ModuleLoader.java	91	Avoid printStackTrace(); use a logger call instead.
6452	src/pipe/gui/ModuleLoader.java	92	A method should have only one exit point, and that should be the last statement in the method
6453	src/pipe/gui/ModuleLoader.java	94	Local variable 'seperator' could be declared final
6454	src/pipe/gui/ModuleLoader.java	97	Local variable 'position' could be declared final
6455	src/pipe/gui/ModuleLoader.java	98	Avoid if (x != y) ..; else ..;
6456	src/pipe/gui/ModuleLoader.java	99	Avoid using if...else statements without curly braces
6457	src/pipe/gui/ModuleLoader.java	102	String.indexOf(char) is faster than String.indexOf(String).
6458	src/pipe/gui/ModuleManager.java	41	Avoid using implementation types like 'HashSet'; use the interface instead
6459	src/pipe/gui/ModuleManager.java	41	Avoid using implementation types like 'HashSet'; use the interface instead
6460	src/pipe/gui/ModuleManager.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
6461	src/pipe/gui/ModuleManager.java	41	Private field 'installedModules' could be made final; it is only initialized in the declaration or constructor.
6462	src/pipe/gui/ModuleManager.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
6463	src/pipe/gui/ModuleManager.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
6464	src/pipe/gui/ModuleManager.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
6465	src/pipe/gui/ModuleManager.java	44	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
6466	src/pipe/gui/ModuleManager.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
6467	src/pipe/gui/ModuleManager.java	46	Use explicit scoping instead of the default package private level
6468	src/pipe/gui/ModuleManager.java	61	Local variable 'modLocation' could be declared final
6469	src/pipe/gui/ModuleManager.java	64	Avoid using if statements without curly braces
6470	src/pipe/gui/ModuleManager.java	65	System.out.print is used
6471	src/pipe/gui/ModuleManager.java	80	Avoid using implementation types like 'Vector'; use the interface instead
6472	src/pipe/gui/ModuleManager.java	80	Avoid using implementation types like 'Vector'; use the interface instead
6473	src/pipe/gui/ModuleManager.java	80	Consider replacing this Vector with the newer java.util.List
6474	src/pipe/gui/ModuleManager.java	80	Parameter 'rootDir' is not assigned and could be declared final
6475	src/pipe/gui/ModuleManager.java	82	Found 'DU'-anomaly for variable 'class_files' (lines '82'-'107').
6476	src/pipe/gui/ModuleManager.java	83	Consider replacing this Vector with the newer java.util.List
6477	src/pipe/gui/ModuleManager.java	83	Local variable 'classes' could be declared final
6478	src/pipe/gui/ModuleManager.java	83	Use ArrayList instead of Vector
6479	src/pipe/gui/ModuleManager.java	84	Local variable 'temp' could be declared final
6480	src/pipe/gui/ModuleManager.java	88	Avoid using if statements without curly braces
6481	src/pipe/gui/ModuleManager.java	89	A method should have only one exit point, and that should be the last statement in the method
6482	src/pipe/gui/ModuleManager.java	92	Local variable 'children' could be declared final
6483	src/pipe/gui/ModuleManager.java	94	This statement may have some unnecessary parentheses
6484	src/pipe/gui/ModuleManager.java	102	Avoid using if statements without curly braces
6485	src/pipe/gui/ModuleManager.java	124	Parameter 'moduleClass' is not assigned and could be declared final
6486	src/pipe/gui/ModuleManager.java	125	Found 'DD'-anomaly for variable 'modNode' (lines '125'-'127').
6487	src/pipe/gui/ModuleManager.java	125	Found 'DU'-anomaly for variable 'modNode' (lines '125'-'148').
6488	src/pipe/gui/ModuleManager.java	129	Avoid instantiating an object just to call getClass() on it; use the .class public member instead
6489	src/pipe/gui/ModuleManager.java	129	Local variable 'desiredParams' could be declared final
6490	src/pipe/gui/ModuleManager.java	133	Avoid variables with short names like m
6491	src/pipe/gui/ModuleManager.java	137	Avoid printStackTrace(); use a logger call instead.
6492	src/pipe/gui/ModuleManager.java	139	Avoid printStackTrace(); use a logger call instead.
6493	src/pipe/gui/ModuleManager.java	143	Avoid variables with short names like m
6494	src/pipe/gui/ModuleManager.java	146	Avoid using if...else statements without curly braces
6495	src/pipe/gui/ModuleManager.java	154	Consider replacing this Vector with the newer java.util.List
6496	src/pipe/gui/ModuleManager.java	175	A catch statement should never catch throwable since it includes errors.
6497	src/pipe/gui/ModuleManager.java	176	System.out.print is used
6498	src/pipe/gui/ModuleManager.java	197	Parameter 'newNode' is not assigned and could be declared final
6499	src/pipe/gui/ModuleManager.java	205	Parameter 'newNode' is not assigned and could be declared final
6500	src/pipe/gui/ModuleManager.java	214	Use explicit scoping instead of the default package private level
6501	src/pipe/gui/ModuleManager.java	216	It is a good practice to call super() in a constructor
6502	src/pipe/gui/ModuleManager.java	216	Parameter 'path' is not assigned and could be declared final
6503	src/pipe/gui/ModuleManager.java	220	Avoid variables with short names like e
6504	src/pipe/gui/ModuleManager.java	221	Avoid variables with short names like o
6505	src/pipe/gui/ModuleManager.java	222	Avoid using if...else statements without curly braces
6506	src/pipe/gui/ModuleManager.java	223	Avoid using if...else statements without curly braces
6507	src/pipe/gui/ModuleManager.java	224	Avoid using if...else statements without curly braces
6508	src/pipe/gui/ModuleManager.java	224	System.out.print is used
6509	src/pipe/gui/ModuleManager.java	232	Avoid variables with short names like e
6510	src/pipe/gui/ModuleManager.java	251	Avoid using if statements without curly braces
6511	src/pipe/gui/ModuleManager.java	254	Avoid using if statements without curly braces
6512	src/pipe/gui/ModuleManager.java	259	Found 'DU'-anomaly for variable 'selPath' (lines '259'-'292').
6513	src/pipe/gui/ModuleManager.java	262	Found 'DU'-anomaly for variable 'nodeObj' (lines '262'-'292').
6514	src/pipe/gui/ModuleManager.java	268	Use equals() to compare object references.
6515	src/pipe/gui/ModuleManager.java	282	Avoid if (x != y) ..; else ..;
6516	src/pipe/gui/ModuleManager.java	287	Avoid using if...else statements without curly braces
6517	src/pipe/gui/ModuleMethod.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
6518	src/pipe/gui/ModuleMethod.java	17	Private field 'modMeth' could be made final; it is only initialized in the declaration or constructor.
6519	src/pipe/gui/ModuleMethod.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
6520	src/pipe/gui/ModuleMethod.java	18	Private field 'modClass' could be made final; it is only initialized in the declaration or constructor.
6521	src/pipe/gui/ModuleMethod.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
6522	src/pipe/gui/ModuleMethod.java	25	Avoid variables with short names like cl
6523	src/pipe/gui/ModuleMethod.java	25	Avoid variables with short names like m
6524	src/pipe/gui/ModuleMethod.java	25	Parameter 'cl' is not assigned and could be declared final
6525	src/pipe/gui/ModuleMethod.java	25	Parameter 'm' is not assigned and could be declared final
6526	src/pipe/gui/ModuleMethod.java	36	Parameter 'name' is not assigned and could be declared final
6527	src/pipe/gui/ModuleMethod.java	44	Parameter 'data' is not assigned and could be declared final
6528	src/pipe/gui/ModuleMethod.java	45	Local variable 'args' could be declared final
6529	src/pipe/gui/ModuleMethod.java	47	Avoid variables with short names like ct
6530	src/pipe/gui/ModuleMethod.java	47	Local variable 'ct' could be declared final
6531	src/pipe/gui/ModuleMethod.java	48	Local variable 'moduleObj' could be declared final
6532	src/pipe/gui/ModuleMethod.java	59	System.out.print is used
6533	src/pipe/gui/ModuleMethod.java	60	Avoid printStackTrace(); use a logger call instead.
6534	src/pipe/gui/PetriNetObjectHandler.java	14	Avoid unused imports such as 'pipe.common.dataLayer.Transition'
6535	src/pipe/gui/PetriNetObjectHandler.java	14	Avoid unused imports such as 'pipe.common.dataLayer.Transition'
6536	src/pipe/gui/PetriNetObjectHandler.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
6537	src/pipe/gui/PetriNetObjectHandler.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
6538	src/pipe/gui/PetriNetObjectHandler.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
6539	src/pipe/gui/PetriNetObjectHandler.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
6540	src/pipe/gui/PetriNetObjectHandler.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
6541	src/pipe/gui/PetriNetObjectHandler.java	32	It is a good practice to call super() in a constructor
6542	src/pipe/gui/PetriNetObjectHandler.java	32	Parameter 'contentpane' is not assigned and could be declared final
6543	src/pipe/gui/PetriNetObjectHandler.java	32	Parameter 'obj' is not assigned and could be declared final
6544	src/pipe/gui/PetriNetObjectHandler.java	38	Parameter 'allow' is not assigned and could be declared final
6545	src/pipe/gui/PetriNetObjectHandler.java	44	Avoid variables with short names like e
6546	src/pipe/gui/PetriNetObjectHandler.java	44	Parameter 'e' is not assigned and could be declared final
6547	src/pipe/gui/PetriNetObjectHandler.java	46	Local variable 'popup' could be declared final
6548	src/pipe/gui/PetriNetObjectHandler.java	48	Local variable 'menuItem' could be declared final
6549	src/pipe/gui/PetriNetObjectHandler.java	59	Avoid variables with short names like e
6550	src/pipe/gui/PetriNetObjectHandler.java	59	Parameter 'e' is not assigned and could be declared final
6551	src/pipe/gui/PetriNetObjectHandler.java	63	Avoid variables with short names like m
6552	src/pipe/gui/PetriNetObjectHandler.java	63	Local variable 'm' could be declared final
6553	src/pipe/gui/PetriNetObjectHandler.java	64	Avoid using if statements without curly braces
6554	src/pipe/gui/PetriNetObjectHandler.java	71	Avoid variables with short names like e
6555	src/pipe/gui/PetriNetObjectHandler.java	73	Avoid using if statements without curly braces
6556	src/pipe/gui/PetriNetObjectHandler.java	76	A switch statement does not contain a break
6557	src/pipe/gui/PetriNetObjectHandler.java	76	A switch with less than 3 branches is inefficient, use a if statement instead.
6558	src/pipe/gui/PetriNetObjectHandler.java	76	Switch statements should have a default label
6559	src/pipe/gui/PetriNetObjectHandler.java	95	Avoid variables with short names like e
6560	src/pipe/gui/PetriNetObjectHandler.java	99	Avoid using if statements without curly braces
6561	src/pipe/gui/PetriNetObjectHandler.java	101	A high ratio of statements to labels in a switch statement. Consider refactoring.
6562	src/pipe/gui/PetriNetObjectHandler.java	101	A switch with less than 3 branches is inefficient, use a if statement instead.
6563	src/pipe/gui/PetriNetObjectHandler.java	101	Switch statements should have a default label
6564	src/pipe/gui/PetriNetObjectHandler.java	130	A high ratio of statements to labels in a switch statement. Consider refactoring.
6565	src/pipe/gui/PetriNetObjectHandler.java	130	A switch statement does not contain a break
6566	src/pipe/gui/PetriNetObjectHandler.java	130	A switch with less than 3 branches is inefficient, use a if statement instead.
6567	src/pipe/gui/PetriNetObjectHandler.java	130	Switch statements should have a default label
6568	src/pipe/gui/PetriNetObjectHandler.java	144	Avoid using if statements without curly braces
6569	src/pipe/gui/PetriNetObjectHandler.java	148	Local variable 'transX' could be declared final
6570	src/pipe/gui/PetriNetObjectHandler.java	149	Local variable 'transY' could be declared final
6571	src/pipe/gui/PlaceHandler.java	19	Parameter 'contentpane' is not assigned and could be declared final
6572	src/pipe/gui/PlaceHandler.java	19	Parameter 'obj' is not assigned and could be declared final
6573	src/pipe/gui/PlaceHandler.java	24	Avoid variables with short names like e
6574	src/pipe/gui/PlaceHandler.java	24	Parameter 'e' is not assigned and could be declared final
6575	src/pipe/gui/PlaceHandler.java	25	Local variable 'popup' could be declared final
6576	src/pipe/gui/PlaceHandler.java	31	Found 'DU'-anomaly for variable 'menuItem' (lines '31'-'50').
6577	src/pipe/gui/PlaceHandler.java	52	Avoid variables with short names like e
6578	src/pipe/gui/PlaceHandler.java	52	Parameter 'e' is not assigned and could be declared final
6579	src/pipe/gui/PlaceHandler.java	55	Found 'DU'-anomaly for variable 'currentMarking' (lines '55'-'78').
6580	src/pipe/gui/PlaceHandler.java	61	Avoid using if...else statements without curly braces
6581	src/pipe/gui/PlaceHandler.java	67	An empty statement (semicolon) not part of a loop
6582	src/pipe/gui/PlaceHandler.java	70	These nested if statements could be combined
6583	src/pipe/gui/PlaceHandler.java	75	An empty statement (semicolon) not part of a loop
6584	src/pipe/gui/PlaceHandler.java	76	An empty statement (semicolon) not part of a loop
6585	src/pipe/gui/PlaceTransitionObjectHandler.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
6586	src/pipe/gui/PlaceTransitionObjectHandler.java	24	Use explicit scoping instead of the default package private level
6587	src/pipe/gui/PlaceTransitionObjectHandler.java	27	Parameter 'contentpane' is not assigned and could be declared final
6588	src/pipe/gui/PlaceTransitionObjectHandler.java	27	Parameter 'obj' is not assigned and could be declared final
6589	src/pipe/gui/PlaceTransitionObjectHandler.java	32	Avoid variables with short names like e
6590	src/pipe/gui/PlaceTransitionObjectHandler.java	32	Parameter 'e' is not assigned and could be declared final
6591	src/pipe/gui/PlaceTransitionObjectHandler.java	33	Local variable 'popup' could be declared final
6592	src/pipe/gui/PlaceTransitionObjectHandler.java	35	Local variable 'menuItem' could be declared final
6593	src/pipe/gui/PlaceTransitionObjectHandler.java	42	Avoid variables with short names like e
6594	src/pipe/gui/PlaceTransitionObjectHandler.java	42	Parameter 'e' is not assigned and could be declared final
6595	src/pipe/gui/PlaceTransitionObjectHandler.java	45	Avoid using if statements without curly braces
6596	src/pipe/gui/PlaceTransitionObjectHandler.java	46	Found 'DU'-anomaly for variable 'currentObject' (lines '46'-'83').
6597	src/pipe/gui/PlaceTransitionObjectHandler.java	46	Local variable 'currentObject' could be declared final
6598	src/pipe/gui/PlaceTransitionObjectHandler.java	47	A high ratio of statements to labels in a switch statement. Consider refactoring.
6599	src/pipe/gui/PlaceTransitionObjectHandler.java	47	A switch statement does not contain a break
6600	src/pipe/gui/PlaceTransitionObjectHandler.java	47	A switch with less than 3 branches is inefficient, use a if statement instead.
6601	src/pipe/gui/PlaceTransitionObjectHandler.java	47	Switch statements should have a default label
6602	src/pipe/gui/PlaceTransitionObjectHandler.java	50	Local variable 'newArc' could be declared final
6603	src/pipe/gui/PlaceTransitionObjectHandler.java	64	Local variable 'createArc' could be declared final
6604	src/pipe/gui/PlaceTransitionObjectHandler.java	65	Avoid empty if statements
6605	src/pipe/gui/PlaceTransitionObjectHandler.java	77	Assigning an Object to null is a code smell. Consider refactoring.
6606	src/pipe/gui/PlaceTransitionObjectHandler.java	78	Assigning an Object to null is a code smell. Consider refactoring.
6607	src/pipe/gui/RotateTransitionAction.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
6608	src/pipe/gui/RotateTransitionAction.java	15	Private field 'angle' could be made final; it is only initialized in the declaration or constructor.
6609	src/pipe/gui/RotateTransitionAction.java	16	Avoid unused private fields such as 'contentPane'.
6610	src/pipe/gui/RotateTransitionAction.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
6611	src/pipe/gui/RotateTransitionAction.java	16	Perhaps 'contentPane' could be replaced by a local variable.
6612	src/pipe/gui/RotateTransitionAction.java	16	Private field 'contentPane' could be made final; it is only initialized in the declaration or constructor.
6613	src/pipe/gui/RotateTransitionAction.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
6614	src/pipe/gui/RotateTransitionAction.java	18	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6615	src/pipe/gui/RotateTransitionAction.java	20	Avoid variables with short names like a
6616	src/pipe/gui/RotateTransitionAction.java	20	Avoid variables with short names like t
6617	src/pipe/gui/RotateTransitionAction.java	20	Parameter 'a' is not assigned and could be declared final
6618	src/pipe/gui/RotateTransitionAction.java	20	Parameter 'contentPane' is not assigned and could be declared final
6619	src/pipe/gui/RotateTransitionAction.java	20	Parameter 'name' is not assigned and could be declared final
6620	src/pipe/gui/RotateTransitionAction.java	20	Parameter 't' is not assigned and could be declared final
6621	src/pipe/gui/RotateTransitionAction.java	29	Avoid variables with short names like e
6622	src/pipe/gui/RotateTransitionAction.java	29	Parameter 'e' is not assigned and could be declared final
6623	src/pipe/gui/SelectionObject.java	36	The class 'SelectionObject' has a Cyclomatic Complexity of 4 (Highest = 22).
6624	src/pipe/gui/SelectionObject.java	37	This class has too many methods, consider refactoring it.
6625	src/pipe/gui/SelectionObject.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
6626	src/pipe/gui/SelectionObject.java	40	Avoid excessively long variable names like selectionRectangle
6627	src/pipe/gui/SelectionObject.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
6628	src/pipe/gui/SelectionObject.java	40	Private field 'selectionRectangle' could be made final; it is only initialized in the declaration or constructor.
6629	src/pipe/gui/SelectionObject.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
6630	src/pipe/gui/SelectionObject.java	42	Variables that are final and static should be in all caps.
6631	src/pipe/gui/SelectionObject.java	43	Avoid excessively long variable names like selectionColorOutline
6632	src/pipe/gui/SelectionObject.java	43	Variables that are final and static should be in all caps.
6633	src/pipe/gui/SelectionObject.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
6634	src/pipe/gui/SelectionObject.java	44	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
6635	src/pipe/gui/SelectionObject.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
6636	src/pipe/gui/SelectionObject.java	46	Private field 'tempBounds' could be made final; it is only initialized in the declaration or constructor.
6637	src/pipe/gui/SelectionObject.java	48	Parameter '_edit_window' is not assigned and could be declared final
6638	src/pipe/gui/SelectionObject.java	53	It is a good practice to call super() in a constructor
6639	src/pipe/gui/SelectionObject.java	80	Avoid variables with short names like e
6640	src/pipe/gui/SelectionObject.java	80	Parameter 'e' is not assigned and could be declared final
6641	src/pipe/gui/SelectionObject.java	80	The method 'processSelection' has a Cyclomatic Complexity of 16.
6642	src/pipe/gui/SelectionObject.java	80	The method processSelection() has an NPath complexity of 770
6643	src/pipe/gui/SelectionObject.java	82	Avoid using if statements without curly braces
6644	src/pipe/gui/SelectionObject.java	83	Local variable 'netObj' could be declared final
6645	src/pipe/gui/SelectionObject.java	88	Local variable 'thisArc' could be declared final
6646	src/pipe/gui/SelectionObject.java	89	Local variable 'thisArcPath' could be declared final
6647	src/pipe/gui/SelectionObject.java	92	Avoid using if...else statements without curly braces
6648	src/pipe/gui/SelectionObject.java	94	Avoid using if...else statements without curly braces
6649	src/pipe/gui/SelectionObject.java	101	Avoid using if statements without curly braces
6650	src/pipe/gui/SelectionObject.java	102	Avoid using if statements without curly braces
6651	src/pipe/gui/SelectionObject.java	102	These nested if statements could be combined
6652	src/pipe/gui/SelectionObject.java	106	Avoid using if statements without curly braces
6653	src/pipe/gui/SelectionObject.java	107	Avoid using if statements without curly braces
6654	src/pipe/gui/SelectionObject.java	107	These nested if statements could be combined
6655	src/pipe/gui/SelectionObject.java	112	These nested if statements could be combined
6656	src/pipe/gui/SelectionObject.java	117	Avoid variables with short names like g
6657	src/pipe/gui/SelectionObject.java	117	Parameter 'g' is not assigned and could be declared final
6658	src/pipe/gui/SelectionObject.java	119	Local variable 'g2d' could be declared final
6659	src/pipe/gui/SelectionObject.java	127	Avoid variables with short names like x
6660	src/pipe/gui/SelectionObject.java	127	Avoid variables with short names like y
6661	src/pipe/gui/SelectionObject.java	127	Parameter 'x' is not assigned and could be declared final
6662	src/pipe/gui/SelectionObject.java	127	Parameter 'y' is not assigned and could be declared final
6663	src/pipe/gui/SelectionObject.java	190	Local variable 'netObj' could be declared final
6664	src/pipe/gui/SelectionObject.java	202	Avoid variables with short names like o
6665	src/pipe/gui/SelectionObject.java	231	Avoid reassigning parameters such as 'transX'
6666	src/pipe/gui/SelectionObject.java	231	Avoid reassigning parameters such as 'transY'
6667	src/pipe/gui/SelectionObject.java	231	The method 'translateSelection' has a Cyclomatic Complexity of 22.
6668	src/pipe/gui/SelectionObject.java	231	The method translateSelection() has an NPath complexity of 2808
6669	src/pipe/gui/SelectionObject.java	232	A method should have only one exit point, and that should be the last statement in the method
6670	src/pipe/gui/SelectionObject.java	237	Found 'DD'-anomaly for variable 'p' (lines '237'-'242').
6671	src/pipe/gui/SelectionObject.java	241	These nested if statements could be combined
6672	src/pipe/gui/SelectionObject.java	279	Avoid using for statements without curly braces
6673	src/pipe/gui/SelectionObject.java	290	Found 'DD'-anomaly for variable 'selectionCount' (lines '290'-'299').
6674	src/pipe/gui/SelectionObject.java	290	Found 'DD'-anomaly for variable 'selectionCount' (lines '290'-'306').
6675	src/pipe/gui/SelectionObject.java	297	Avoid using for statements without curly braces
6676	src/pipe/gui/SelectionObject.java	299	Found 'DD'-anomaly for variable 'selectionCount' (lines '299'-'299').
6677	src/pipe/gui/SelectionObject.java	299	Found 'DD'-anomaly for variable 'selectionCount' (lines '299'-'306').
6678	src/pipe/gui/SelectionObject.java	305	These nested if statements could be combined
6679	src/pipe/gui/SelectionObject.java	306	Found 'DD'-anomaly for variable 'selectionCount' (lines '306'-'299').
6680	src/pipe/gui/SelectionObject.java	306	Found 'DD'-anomaly for variable 'selectionCount' (lines '306'-'306').
6681	src/pipe/gui/SplitArcAction.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
6682	src/pipe/gui/SplitArcAction.java	21	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6683	src/pipe/gui/SplitArcAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
6684	src/pipe/gui/SplitArcAction.java	22	Use explicit scoping instead of the default package private level
6685	src/pipe/gui/SplitArcAction.java	24	It is a good practice to call super() in a constructor
6686	src/pipe/gui/SplitArcAction.java	24	Parameter 'arc' is not assigned and could be declared final
6687	src/pipe/gui/SplitArcAction.java	24	Parameter 'mousepos' is not assigned and could be declared final
6688	src/pipe/gui/SplitArcAction.java	29	Local variable 'offset' could be declared final
6689	src/pipe/gui/SplitArcAction.java	33	Parameter 'arg0' is not assigned and could be declared final
6690	src/pipe/gui/SplitArcPointAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
6691	src/pipe/gui/SplitArcPointAction.java	22	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6692	src/pipe/gui/SplitArcPointAction.java	24	It is a good practice to call super() in a constructor
6693	src/pipe/gui/SplitArcPointAction.java	24	Parameter 'component' is not assigned and could be declared final
6694	src/pipe/gui/SplitArcPointAction.java	28	Avoid variables with short names like e
6695	src/pipe/gui/SplitArcPointAction.java	28	Parameter 'e' is not assigned and could be declared final
6696	src/pipe/gui/StatusBar.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
6697	src/pipe/gui/StatusBar.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
6698	src/pipe/gui/StatusBar.java	12	Found non-transient, non-static member. Please mark as transient or provide accessors.
6699	src/pipe/gui/StatusBar.java	13	Found non-transient, non-static member. Please mark as transient or provide accessors.
6700	src/pipe/gui/StatusBar.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
6701	src/pipe/gui/StatusBar.java	20	Private field 'label' could be made final; it is only initialized in the declaration or constructor.
6702	src/pipe/gui/StatusBar.java	29	Parameter 'newText' is not assigned and could be declared final
6703	src/pipe/gui/StatusBar.java	33	Parameter 'type' is not assigned and could be declared final
6704	src/pipe/gui/ToggleArcPointAction.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
6705	src/pipe/gui/ToggleArcPointAction.java	19	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
6706	src/pipe/gui/ToggleArcPointAction.java	21	It is a good practice to call super() in a constructor
6707	src/pipe/gui/ToggleArcPointAction.java	21	Parameter 'component' is not assigned and could be declared final
6708	src/pipe/gui/ToggleArcPointAction.java	28	Avoid variables with short names like e
6709	src/pipe/gui/ToggleArcPointAction.java	28	Parameter 'e' is not assigned and could be declared final
6710	src/pipe/gui/TransitionHandler.java	20	Use explicit scoping instead of the default package private level
6711	src/pipe/gui/TransitionHandler.java	22	Parameter 'contentpane' is not assigned and could be declared final
6712	src/pipe/gui/TransitionHandler.java	22	Parameter 'obj' is not assigned and could be declared final
6713	src/pipe/gui/TransitionHandler.java	38	Avoid variables with short names like e
6714	src/pipe/gui/TransitionHandler.java	38	Parameter 'e' is not assigned and could be declared final
6715	src/pipe/gui/TransitionHandler.java	39	Local variable 'popup' could be declared final
6716	src/pipe/gui/TransitionHandler.java	43	Avoid using if...else statements without curly braces
6717	src/pipe/gui/TransitionHandler.java	45	Avoid using if...else statements without curly braces
6718	src/pipe/gui/TransitionHandler.java	56	Avoid using if...else statements without curly braces
6719	src/pipe/gui/TransitionHandler.java	58	Avoid using if...else statements without curly braces
6720	src/pipe/gui/TransitionHandler.java	63	Avoid using if...else statements without curly braces
6721	src/pipe/gui/TransitionHandler.java	68	Local variable 'rotateMenu' could be declared final
6722	src/pipe/gui/ViewExpansionComponent.java	7	Found non-transient, non-static member. Please mark as transient or provide accessors.
6723	src/pipe/gui/ViewExpansionComponent.java	8	Found non-transient, non-static member. Please mark as transient or provide accessors.
6724	src/pipe/gui/ViewExpansionComponent.java	15	Avoid variables with short names like x
6725	src/pipe/gui/ViewExpansionComponent.java	15	Avoid variables with short names like y
6726	src/pipe/gui/ViewExpansionComponent.java	15	Parameter 'x' is not assigned and could be declared final
6727	src/pipe/gui/ViewExpansionComponent.java	15	Parameter 'y' is not assigned and could be declared final
6728	src/pipe/gui/ViewExpansionComponent.java	17	Overridable method 'setOriginalX' called during object construction
6729	src/pipe/gui/ViewExpansionComponent.java	18	Overridable method 'setOriginalY' called during object construction
6730	src/pipe/gui/ViewExpansionComponent.java	23	Avoid variables with short names like x
6731	src/pipe/gui/ViewExpansionComponent.java	23	Parameter 'x' is not assigned and could be declared final
6732	src/pipe/gui/ViewExpansionComponent.java	28	Avoid variables with short names like y
6733	src/pipe/gui/ViewExpansionComponent.java	28	Parameter 'y' is not assigned and could be declared final
6734	src/pipe/gui/ViewExpansionComponent.java	34	Local variable 'scaleFactor' could be declared final
6735	src/pipe/gui/ZoomController.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
6736	src/pipe/gui/ZoomController.java	15	Private field 'transform' could be made final; it is only initialized in the declaration or constructor.
6737	src/pipe/gui/ZoomController.java	16	Avoid unused private fields such as 'myNet'.
6738	src/pipe/gui/ZoomController.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
6739	src/pipe/gui/ZoomController.java	16	Perhaps 'myNet' could be replaced by a local variable.
6740	src/pipe/gui/ZoomController.java	18	Parameter 'view' is not assigned and could be declared final
6741	src/pipe/gui/ZoomController.java	22	Parameter 'pct' is not assigned and could be declared final
6742	src/pipe/gui/ZoomController.java	22	Parameter 'view' is not assigned and could be declared final
6743	src/pipe/gui/ZoomController.java	51	Parameter 'newPercent' is not assigned and could be declared final
6744	src/pipe/gui/ZoomController.java	52	Avoid using if statements without curly braces
6745	src/pipe/gui/ZoomController.java	62	Parameter 'val' is not assigned and could be declared final
6746	src/pipe/gui/Zoomable.java	5	Avoid modifiers which are implied by the context
6747	src/pipe/gui/widgets/ButtonBar.java	22	Parameter 'actions' is not assigned and could be declared final
6748	src/pipe/gui/widgets/ButtonBar.java	22	Parameter 'captions' is not assigned and could be declared final
6749	src/pipe/gui/widgets/ButtonBar.java	26	Avoid instantiating new objects inside loops
6750	src/pipe/gui/widgets/ButtonBar.java	26	Avoid variables with short names like b
6751	src/pipe/gui/widgets/ButtonBar.java	26	Local variable 'b' could be declared final
6752	src/pipe/gui/widgets/ButtonBar.java	30	Avoid variables with short names like d
6753	src/pipe/gui/widgets/ButtonBar.java	30	Local variable 'd' could be declared final
6754	src/pipe/gui/widgets/ButtonBar.java	39	Parameter 'action' is not assigned and could be declared final
6755	src/pipe/gui/widgets/ButtonBar.java	39	Parameter 'caption' is not assigned and could be declared final
6756	src/pipe/gui/widgets/CartesianGraphFrame.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
6757	src/pipe/gui/widgets/CartesianGraphFrame.java	30	Use explicit scoping instead of the default package private level
6758	src/pipe/gui/widgets/CartesianGraphFrame.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
6759	src/pipe/gui/widgets/CartesianGraphFrame.java	31	Perhaps 'graph' could be replaced by a local variable.
6760	src/pipe/gui/widgets/CartesianGraphFrame.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
6761	src/pipe/gui/widgets/CartesianGraphFrame.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
6762	src/pipe/gui/widgets/CartesianGraphFrame.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
6763	src/pipe/gui/widgets/CartesianGraphFrame.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
6764	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Avoid using implementation types like 'ArrayList'; use the interface instead
6765	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Avoid using implementation types like 'ArrayList'; use the interface instead
6766	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Avoid using implementation types like 'ArrayList'; use the interface instead
6767	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Avoid using implementation types like 'ArrayList'; use the interface instead
6768	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Parameter 'xlist' is not assigned and could be declared final
6769	src/pipe/gui/widgets/CartesianGraphFrame.java	39	Parameter 'ylist' is not assigned and could be declared final
6770	src/pipe/gui/widgets/CartesianGraphFrame.java	47	Parameter 'wev' is not assigned and could be declared final
6771	src/pipe/gui/widgets/CartesianGraphFrame.java	48	Avoid variables with short names like w
6772	src/pipe/gui/widgets/CartesianGraphFrame.java	48	Local variable 'w' could be declared final
6773	src/pipe/gui/widgets/CartesianGraphFrame.java	56	Local variable 'contentPane' could be declared final
6774	src/pipe/gui/widgets/CartesianGraphFrame.java	67	Avoid unused private fields such as 'CopyHandler'.
6775	src/pipe/gui/widgets/CartesianGraphFrame.java	67	Private field 'CopyHandler' could be made final; it is only initialized in the declaration or constructor.
6776	src/pipe/gui/widgets/CartesianGraphFrame.java	67	Variables should start with a lowercase character
6777	src/pipe/gui/widgets/CartesianGraphFrame.java	68	Parameter 'arg0' is not assigned and could be declared final
6778	src/pipe/gui/widgets/CartesianGraphFrame.java	69	Local variable 'data' could be declared final
6779	src/pipe/gui/widgets/CartesianGraphFrame.java	73	System.out.print is used
6780	src/pipe/gui/widgets/CartesianGraphFrame.java	83	Found non-transient, non-static member. Please mark as transient or provide accessors.
6781	src/pipe/gui/widgets/CartesianGraphFrame.java	83	Private field 'SaveHandler' could be made final; it is only initialized in the declaration or constructor.
6782	src/pipe/gui/widgets/CartesianGraphFrame.java	83	Variables should start with a lowercase character
6783	src/pipe/gui/widgets/CartesianGraphFrame.java	84	Parameter 'arg0' is not assigned and could be declared final
6784	src/pipe/gui/widgets/CartesianGraphFrame.java	85	Avoid variables with short names like fw
6785	src/pipe/gui/widgets/CartesianGraphFrame.java	85	Found 'DD'-anomaly for variable 'fw' (lines '85'-'99').
6786	src/pipe/gui/widgets/CartesianGraphFrame.java	85	Found 'DU'-anomaly for variable 'fw' (lines '85'-'119').
6787	src/pipe/gui/widgets/CartesianGraphFrame.java	86	Found 'DU'-anomaly for variable 'content' (lines '86'-'119').
6788	src/pipe/gui/widgets/CartesianGraphFrame.java	86	Local variable 'content' could be declared final
6789	src/pipe/gui/widgets/CartesianGraphFrame.java	90	Avoid variables with short names like fc
6790	src/pipe/gui/widgets/CartesianGraphFrame.java	90	Local variable 'fc' could be declared final
6791	src/pipe/gui/widgets/CartesianGraphFrame.java	96	Avoid using if...else statements without curly braces
6792	src/pipe/gui/widgets/CartesianGraphFrame.java	102	Avoid printStackTrace(); use a logger call instead.
6793	src/pipe/gui/widgets/CartesianGraphFrame.java	106	Avoid appending characters as strings in StringBuffer.append.
6794	src/pipe/gui/widgets/CartesianGraphFrame.java	117	Avoid printStackTrace(); use a logger call instead.
6795	src/pipe/gui/widgets/EnterOptionsPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6796	src/pipe/gui/widgets/EnterOptionsPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6797	src/pipe/gui/widgets/EnterOptionsPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6798	src/pipe/gui/widgets/EnterOptionsPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6799	src/pipe/gui/widgets/EnterOptionsPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6800	src/pipe/gui/widgets/EnterOptionsPane.java	26	Private field 'TStartField' could be made final; it is only initialized in the declaration or constructor.
6801	src/pipe/gui/widgets/EnterOptionsPane.java	26	Private field 'TStopField' could be made final; it is only initialized in the declaration or constructor.
6802	src/pipe/gui/widgets/EnterOptionsPane.java	26	Private field 'bufferField' could be made final; it is only initialized in the declaration or constructor.
6803	src/pipe/gui/widgets/EnterOptionsPane.java	26	Private field 'startStatesField' could be made final; it is only initialized in the declaration or constructor.
6804	src/pipe/gui/widgets/EnterOptionsPane.java	26	Private field 'stepField' could be made final; it is only initialized in the declaration or constructor.
6805	src/pipe/gui/widgets/EnterOptionsPane.java	27	Perhaps 'startStLbl' could be replaced by a local variable.
6806	src/pipe/gui/widgets/EnterOptionsPane.java	29	Avoid unused private fields such as 'scroller'.
6807	src/pipe/gui/widgets/EnterOptionsPane.java	39	Parameter 'defaultStatus' is not assigned and could be declared final
6808	src/pipe/gui/widgets/EnterOptionsPane.java	41	Avoid variables with short names like c
6809	src/pipe/gui/widgets/EnterOptionsPane.java	41	Local variable 'c' could be declared final
6810	src/pipe/gui/widgets/EnterOptionsPane.java	236	Parameter 'exp' is not assigned and could be declared final
6811	src/pipe/gui/widgets/EnterOptionsPane.java	239	Parameter 'exp' is not assigned and could be declared final
6812	src/pipe/gui/widgets/EnterOptionsPane.java	243	Parameter 'exp' is not assigned and could be declared final
6813	src/pipe/gui/widgets/EnterOptionsPane.java	247	Parameter 'exp' is not assigned and could be declared final
6814	src/pipe/gui/widgets/EnterOptionsPane.java	297	Avoid variables with short names like c
6815	src/pipe/gui/widgets/EnterOptionsPane.java	297	Local variable 'c' could be declared final
6816	src/pipe/gui/widgets/FileBrowser.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
6817	src/pipe/gui/widgets/FileBrowser.java	18	Avoid reassigning parameters such as 'filetype'
6818	src/pipe/gui/widgets/FileBrowser.java	18	Parameter 'ext' is not assigned and could be declared final
6819	src/pipe/gui/widgets/FileBrowser.java	18	Parameter 'path' is not assigned and could be declared final
6820	src/pipe/gui/widgets/FileBrowser.java	20	Avoid using if statements without curly braces
6821	src/pipe/gui/widgets/FileBrowser.java	23	Avoid variables with short names like f
6822	src/pipe/gui/widgets/FileBrowser.java	23	Local variable 'f' could be declared final
6823	src/pipe/gui/widgets/FileBrowser.java	24	Avoid using if statements without curly braces
6824	src/pipe/gui/widgets/FileBrowser.java	25	Avoid using if statements without curly braces
6825	src/pipe/gui/widgets/FileBrowser.java	29	Local variable 'filter' could be declared final
6826	src/pipe/gui/widgets/FileBrowser.java	33	Parameter 'path' is not assigned and could be declared final
6827	src/pipe/gui/widgets/FileBrowser.java	42	Avoid using if statements without curly braces
6828	src/pipe/gui/widgets/FileBrowser.java	44	A method should have only one exit point, and that should be the last statement in the method
6829	src/pipe/gui/widgets/FileBrowser.java	45	Avoid empty catch blocks
6830	src/pipe/gui/widgets/FileBrowser.java	46	An empty statement (semicolon) not part of a loop
6831	src/pipe/gui/widgets/FileBrowser.java	51	Avoid using if statements without curly braces
6832	src/pipe/gui/widgets/FileBrowser.java	53	Avoid variables with short names like f
6833	src/pipe/gui/widgets/FileBrowser.java	60	A method should have only one exit point, and that should be the last statement in the method
6834	src/pipe/gui/widgets/FileBrowser.java	61	A method should have only one exit point, and that should be the last statement in the method
6835	src/pipe/gui/widgets/FileBrowser.java	62	Avoid empty catch blocks
6836	src/pipe/gui/widgets/FileBrowser.java	63	An empty statement (semicolon) not part of a loop
6837	src/pipe/gui/widgets/GraphFrame.java	26	Avoid variables with short names like gp
6838	src/pipe/gui/widgets/GraphFrame.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
6839	src/pipe/gui/widgets/GraphFrame.java	26	Use explicit scoping instead of the default package private level
6840	src/pipe/gui/widgets/GraphFrame.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
6841	src/pipe/gui/widgets/GraphFrame.java	27	Use explicit scoping instead of the default package private level
6842	src/pipe/gui/widgets/GraphFrame.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
6843	src/pipe/gui/widgets/GraphFrame.java	28	Use explicit scoping instead of the default package private level
6844	src/pipe/gui/widgets/GraphFrame.java	30	Parameter 'graph' is not assigned and could be declared final
6845	src/pipe/gui/widgets/GraphFrame.java	41	Parameter 'wev' is not assigned and could be declared final
6846	src/pipe/gui/widgets/GraphFrame.java	42	Avoid variables with short names like w
6847	src/pipe/gui/widgets/GraphFrame.java	42	Local variable 'w' could be declared final
6848	src/pipe/gui/widgets/GraphFrame.java	48	Local variable 'jsp' could be declared final
6849	src/pipe/gui/widgets/GraphFrame.java	52	Local variable 'gbl' could be declared final
6850	src/pipe/gui/widgets/GraphFrame.java	53	Local variable 'gbc' could be declared final
6851	src/pipe/gui/widgets/GraphFrame.java	62	Local variable 'legend' could be declared final
6852	src/pipe/gui/widgets/GraphFrame.java	70	Found 'DD'-anomaly for variable 'connector' (lines '70'-'72').
6853	src/pipe/gui/widgets/GraphFrame.java	70	Found 'DD'-anomaly for variable 'connector' (lines '70'-'72').
6854	src/pipe/gui/widgets/GraphFrame.java	72	This statement may have some unnecessary parentheses
6855	src/pipe/gui/widgets/GraphFrame.java	79	System.out.print is used
6856	src/pipe/gui/widgets/GraphFrame.java	80	Assigning an Object to null is a code smell. Consider refactoring.
6857	src/pipe/gui/widgets/GraphFrame.java	85	System.out.print is used
6858	src/pipe/gui/widgets/GraphFrame.java	90	Deeply nested if..then statements are hard to read
6859	src/pipe/gui/widgets/GraphFrame.java	91	System.out.print is used
6860	src/pipe/gui/widgets/GraphFrame.java	94	System.out.print is used
6861	src/pipe/gui/widgets/GraphFrame.java	98	Assigning an Object to null is a code smell. Consider refactoring.
6862	src/pipe/gui/widgets/GraphFrame.java	98	Found 'DU'-anomaly for variable 'connector' (lines '98'-'101').
6863	src/pipe/gui/widgets/GraphFrame.java	98	Found 'DU'-anomaly for variable 'connector' (lines '98'-'101').
6864	src/pipe/gui/widgets/GraphPanel.java	31	Avoid using implementation types like 'ArrayList'; use the interface instead
6865	src/pipe/gui/widgets/GraphPanel.java	31	Avoid using implementation types like 'ArrayList'; use the interface instead
6866	src/pipe/gui/widgets/GraphPanel.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
6867	src/pipe/gui/widgets/GraphPanel.java	31	Use explicit scoping instead of the default package private level
6868	src/pipe/gui/widgets/GraphPanel.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
6869	src/pipe/gui/widgets/GraphPanel.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
6870	src/pipe/gui/widgets/GraphPanel.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
6871	src/pipe/gui/widgets/GraphPanel.java	32	Use explicit scoping instead of the default package private level
6872	src/pipe/gui/widgets/GraphPanel.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
6873	src/pipe/gui/widgets/GraphPanel.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
6874	src/pipe/gui/widgets/GraphPanel.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
6875	src/pipe/gui/widgets/GraphPanel.java	33	Use explicit scoping instead of the default package private level
6876	src/pipe/gui/widgets/GraphPanel.java	34	Use explicit scoping instead of the default package private level
6877	src/pipe/gui/widgets/GraphPanel.java	34	Variables that are final and static should be in all caps.
6878	src/pipe/gui/widgets/GraphPanel.java	35	Use explicit scoping instead of the default package private level
6879	src/pipe/gui/widgets/GraphPanel.java	35	Variables that are final and static should be in all caps.
6880	src/pipe/gui/widgets/GraphPanel.java	36	Variables that are final and static should be in all caps.
6881	src/pipe/gui/widgets/GraphPanel.java	37	Variables that are final and static should be in all caps.
6882	src/pipe/gui/widgets/GraphPanel.java	38	Variables that are final and static should be in all caps.
6883	src/pipe/gui/widgets/GraphPanel.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
6884	src/pipe/gui/widgets/GraphPanel.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
6885	src/pipe/gui/widgets/GraphPanel.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
6886	src/pipe/gui/widgets/GraphPanel.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
6887	src/pipe/gui/widgets/GraphPanel.java	40	Avoid variables with short names like x
6888	src/pipe/gui/widgets/GraphPanel.java	40	Avoid variables with short names like y
6889	src/pipe/gui/widgets/GraphPanel.java	40	Parameter 'x' is not assigned and could be declared final
6890	src/pipe/gui/widgets/GraphPanel.java	40	Parameter 'y' is not assigned and could be declared final
6891	src/pipe/gui/widgets/GraphPanel.java	52	Avoid using implementation types like 'ArrayList'; use the interface instead
6892	src/pipe/gui/widgets/GraphPanel.java	52	Avoid using implementation types like 'ArrayList'; use the interface instead
6893	src/pipe/gui/widgets/GraphPanel.java	52	Avoid variables with short names like x
6894	src/pipe/gui/widgets/GraphPanel.java	52	Avoid variables with short names like y
6895	src/pipe/gui/widgets/GraphPanel.java	52	Parameter 'x' is not assigned and could be declared final
6896	src/pipe/gui/widgets/GraphPanel.java	52	Parameter 'y' is not assigned and could be declared final
6897	src/pipe/gui/widgets/GraphPanel.java	58	Avoid variables with short names like g
6898	src/pipe/gui/widgets/GraphPanel.java	58	Parameter 'g' is not assigned and could be declared final
6899	src/pipe/gui/widgets/GraphPanel.java	60	Local variable 'g2' could be declared final
6900	src/pipe/gui/widgets/GraphPanel.java	78	Local variable 'currentX' could be declared final
6901	src/pipe/gui/widgets/GraphPanel.java	79	Avoid using if statements without curly braces
6902	src/pipe/gui/widgets/GraphPanel.java	80	Avoid using if statements without curly braces
6903	src/pipe/gui/widgets/GraphPanel.java	85	Local variable 'currentY' could be declared final
6904	src/pipe/gui/widgets/GraphPanel.java	86	Avoid using if statements without curly braces
6905	src/pipe/gui/widgets/GraphPanel.java	87	Avoid using if statements without curly braces
6906	src/pipe/gui/widgets/GraphPanel.java	92	Local variable 'xAxis' could be declared final
6907	src/pipe/gui/widgets/GraphPanel.java	93	Local variable 'yAxis' could be declared final
6908	src/pipe/gui/widgets/GraphPanel.java	96	Do not add empty strings
6909	src/pipe/gui/widgets/GraphPanel.java	97	Do not add empty strings
6910	src/pipe/gui/widgets/GraphPanel.java	102	Found 'DU'-anomaly for variable 'currentPoint' (lines '102'-'109').
6911	src/pipe/gui/widgets/GraphPanelPane.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
6912	src/pipe/gui/widgets/GraphPanelPane.java	30	Use explicit scoping instead of the default package private level
6913	src/pipe/gui/widgets/GraphPanelPane.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
6914	src/pipe/gui/widgets/GraphPanelPane.java	38	Private field 'saveButtonClick' could be made final; it is only initialized in the declaration or constructor.
6915	src/pipe/gui/widgets/GraphPanelPane.java	39	Avoid variables with short names like e
6916	src/pipe/gui/widgets/GraphPanelPane.java	39	Parameter 'e' is not assigned and could be declared final
6917	src/pipe/gui/widgets/GraphPanelPane.java	40	Found 'DD'-anomaly for variable 'filename' (lines '40'-'41').
6918	src/pipe/gui/widgets/GraphPanelPane.java	40	Found 'DD'-anomaly for variable 'filename' (lines '40'-'42').
6919	src/pipe/gui/widgets/GraphPanelPane.java	41	Avoid using if statements without curly braces
6920	src/pipe/gui/widgets/GraphPanelPane.java	41	Found 'DD'-anomaly for variable 'filename' (lines '41'-'42').
6921	src/pipe/gui/widgets/GraphPanelPane.java	43	Avoid using if statements without curly braces
6922	src/pipe/gui/widgets/GraphPanelPane.java	45	Avoid variables with short names like b
6923	src/pipe/gui/widgets/GraphPanelPane.java	45	Local variable 'b' could be declared final
6924	src/pipe/gui/widgets/GraphPanelPane.java	47	Avoid variables with short names like d
6925	src/pipe/gui/widgets/GraphPanelPane.java	47	Local variable 'd' could be declared final
6926	src/pipe/gui/widgets/GraphPanelPane.java	54	Avoid empty catch blocks
6927	src/pipe/gui/widgets/GraphPanelPane.java	59	Use block level rather than method level synchronization
6928	src/pipe/gui/widgets/JFCGraphFrame.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
6929	src/pipe/gui/widgets/JFCGraphFrame.java	31	Private field 'butBar' could be made final; it is only initialized in the declaration or constructor.
6930	src/pipe/gui/widgets/JFCGraphFrame.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
6931	src/pipe/gui/widgets/JFCGraphFrame.java	32	Private field 'graph' could be made final; it is only initialized in the declaration or constructor.
6932	src/pipe/gui/widgets/JFCGraphFrame.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
6933	src/pipe/gui/widgets/JFCGraphFrame.java	33	Perhaps 'chartpnl' could be replaced by a local variable.
6934	src/pipe/gui/widgets/JFCGraphFrame.java	33	Private field 'chartpnl' could be made final; it is only initialized in the declaration or constructor.
6935	src/pipe/gui/widgets/JFCGraphFrame.java	39	Parameter 'graph' is not assigned and could be declared final
6936	src/pipe/gui/widgets/JFCGraphFrame.java	39	Parameter 'graphName' is not assigned and could be declared final
6937	src/pipe/gui/widgets/JFCGraphFrame.java	45	Local variable 'contentPane' could be declared final
6938	src/pipe/gui/widgets/JFCGraphFrame.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
6939	src/pipe/gui/widgets/JFCGraphFrame.java	55	Use explicit scoping instead of the default package private level
6940	src/pipe/gui/widgets/JFCGraphFrame.java	56	Parameter 'eve' is not assigned and could be declared final
6941	src/pipe/gui/widgets/JFCGraphFrame.java	57	Found 'DU'-anomaly for variable 'graphImage' (lines '57'-'74').
6942	src/pipe/gui/widgets/JFCGraphFrame.java	57	Local variable 'graphImage' could be declared final
6943	src/pipe/gui/widgets/JFCGraphFrame.java	61	Avoid variables with short names like fc
6944	src/pipe/gui/widgets/JFCGraphFrame.java	61	Local variable 'fc' could be declared final
6945	src/pipe/gui/widgets/JFCGraphFrame.java	62	Local variable 'returnVal' could be declared final
6946	src/pipe/gui/widgets/JFCGraphFrame.java	67	Avoid using if...else statements without curly braces
6947	src/pipe/gui/widgets/JFCGraphFrame.java	72	Avoid printStackTrace(); use a logger call instead.
6948	src/pipe/gui/widgets/JFCGraphFrame.java	80	Found non-transient, non-static member. Please mark as transient or provide accessors.
6949	src/pipe/gui/widgets/JFCGraphFrame.java	80	Private field 'cvsListener' could be made final; it is only initialized in the declaration or constructor.
6950	src/pipe/gui/widgets/JFCGraphFrame.java	81	Parameter 'arg0' is not assigned and could be declared final
6951	src/pipe/gui/widgets/JFCGraphFrame.java	82	Local variable 'graphData' could be declared final
6952	src/pipe/gui/widgets/JFCGraphFrame.java	83	Found 'DU'-anomaly for variable 'size' (lines '83'-'119').
6953	src/pipe/gui/widgets/JFCGraphFrame.java	85	Avoid variables with short names like fw
6954	src/pipe/gui/widgets/JFCGraphFrame.java	85	Found 'DD'-anomaly for variable 'fw' (lines '85'-'99').
6955	src/pipe/gui/widgets/JFCGraphFrame.java	85	Found 'DU'-anomaly for variable 'fw' (lines '85'-'119').
6956	src/pipe/gui/widgets/JFCGraphFrame.java	86	Found 'DU'-anomaly for variable 'content' (lines '86'-'119').
6957	src/pipe/gui/widgets/JFCGraphFrame.java	90	Avoid variables with short names like fc
6958	src/pipe/gui/widgets/JFCGraphFrame.java	96	Avoid using if...else statements without curly braces
6959	src/pipe/gui/widgets/JFCGraphFrame.java	102	Avoid printStackTrace(); use a logger call instead.
6960	src/pipe/gui/widgets/JFCGraphFrame.java	106	Avoid appending characters as strings in StringBuffer.append.
6961	src/pipe/gui/widgets/JFCGraphFrame.java	117	Avoid printStackTrace(); use a logger call instead.
6962	src/pipe/gui/widgets/PetriNetChooserPanel.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
6963	src/pipe/gui/widgets/PetriNetChooserPanel.java	27	Use explicit scoping instead of the default package private level
6964	src/pipe/gui/widgets/PetriNetChooserPanel.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
6965	src/pipe/gui/widgets/PetriNetChooserPanel.java	28	Use explicit scoping instead of the default package private level
6966	src/pipe/gui/widgets/PetriNetChooserPanel.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
6967	src/pipe/gui/widgets/PetriNetChooserPanel.java	29	Use explicit scoping instead of the default package private level
6968	src/pipe/gui/widgets/PetriNetChooserPanel.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
6969	src/pipe/gui/widgets/PetriNetChooserPanel.java	30	Use explicit scoping instead of the default package private level
6970	src/pipe/gui/widgets/PetriNetChooserPanel.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
6971	src/pipe/gui/widgets/PetriNetChooserPanel.java	31	Private field 'defaultNet' could be made final; it is only initialized in the declaration or constructor.
6972	src/pipe/gui/widgets/PetriNetChooserPanel.java	32	Parameter 'defaultNet' is not assigned and could be declared final
6973	src/pipe/gui/widgets/PetriNetChooserPanel.java	32	Parameter 'title' is not assigned and could be declared final
6974	src/pipe/gui/widgets/PetriNetChooserPanel.java	49	Avoid if (x != y) ..; else ..;
6975	src/pipe/gui/widgets/PetriNetChooserPanel.java	63	Avoid using if statements without curly braces
6976	src/pipe/gui/widgets/PetriNetChooserPanel.java	66	Private field 'useCurrentClick' could be made final; it is only initialized in the declaration or constructor.
6977	src/pipe/gui/widgets/PetriNetChooserPanel.java	67	Avoid variables with short names like e
6978	src/pipe/gui/widgets/PetriNetChooserPanel.java	67	Parameter 'e' is not assigned and could be declared final
6979	src/pipe/gui/widgets/PetriNetChooserPanel.java	68	Local variable 'enabled' could be declared final
6980	src/pipe/gui/widgets/PetriNetChooserPanel.java	75	Private field 'browseButtonClick' could be made final; it is only initialized in the declaration or constructor.
6981	src/pipe/gui/widgets/PetriNetChooserPanel.java	76	Avoid variables with short names like e
6982	src/pipe/gui/widgets/PetriNetChooserPanel.java	76	Parameter 'e' is not assigned and could be declared final
6983	src/pipe/gui/widgets/PetriNetChooserPanel.java	77	Avoid variables with short names like f
6984	src/pipe/gui/widgets/PetriNetChooserPanel.java	77	Local variable 'f' could be declared final
6985	src/pipe/gui/widgets/PetriNetChooserPanel.java	78	Avoid using if statements without curly braces
6986	src/pipe/gui/widgets/PetriNetChooserPanel.java	83	A method should have only one exit point, and that should be the last statement in the method
6987	src/pipe/gui/widgets/PetriNetChooserPanel.java	83	Avoid using if...else statements without curly braces
6988	src/pipe/gui/widgets/PetriNetChooserPanel.java	85	Local variable 'FileName' could be declared final
6989	src/pipe/gui/widgets/PetriNetChooserPanel.java	87	Local variable 'result' could be declared final
6990	src/pipe/gui/widgets/PetriNetChooserPanel.java	88	A method should have only one exit point, and that should be the last statement in the method
6991	src/pipe/gui/widgets/PetriNetChooserPanel.java	88	Consider simply returning the value vs storing it in local variable 'result'
6992	src/pipe/gui/widgets/ResultsHTMLPane.java	40	The class 'ResultsHTMLPane' has a Cyclomatic Complexity of 4 (Highest = 13).
6993	src/pipe/gui/widgets/ResultsHTMLPane.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
6994	src/pipe/gui/widgets/ResultsHTMLPane.java	41	Use explicit scoping instead of the default package private level
6995	src/pipe/gui/widgets/ResultsHTMLPane.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
6996	src/pipe/gui/widgets/ResultsHTMLPane.java	42	Use explicit scoping instead of the default package private level
6997	src/pipe/gui/widgets/ResultsHTMLPane.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
6998	src/pipe/gui/widgets/ResultsHTMLPane.java	43	Use explicit scoping instead of the default package private level
6999	src/pipe/gui/widgets/ResultsHTMLPane.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
7000	src/pipe/gui/widgets/ResultsHTMLPane.java	44	Use explicit scoping instead of the default package private level
7001	src/pipe/gui/widgets/ResultsHTMLPane.java	46	Document empty constructor
7002	src/pipe/gui/widgets/ResultsHTMLPane.java	46	It is a good practice to call super() in a constructor
7003	src/pipe/gui/widgets/ResultsHTMLPane.java	50	Parameter 'path' is not assigned and could be declared final
7004	src/pipe/gui/widgets/ResultsHTMLPane.java	65	Avoid throwing raw exception types.
7005	src/pipe/gui/widgets/ResultsHTMLPane.java	65	New exception is thrown in catch block, original stack trace may be lost
7006	src/pipe/gui/widgets/ResultsHTMLPane.java	84	Local variable 'scroller' could be declared final
7007	src/pipe/gui/widgets/ResultsHTMLPane.java	92	Parameter 'text' is not assigned and could be declared final
7008	src/pipe/gui/widgets/ResultsHTMLPane.java	109	Parameter 'cols' is not assigned and could be declared final
7009	src/pipe/gui/widgets/ResultsHTMLPane.java	109	Parameter 'columnHeaders' is not assigned and could be declared final
7010	src/pipe/gui/widgets/ResultsHTMLPane.java	109	Parameter 'doShading' is not assigned and could be declared final
7011	src/pipe/gui/widgets/ResultsHTMLPane.java	109	The method 'makeTable' has a Cyclomatic Complexity of 13.
7012	src/pipe/gui/widgets/ResultsHTMLPane.java	109	The method makeTable() has an NPath complexity of 705
7013	src/pipe/gui/widgets/ResultsHTMLPane.java	110	Avoid variables with short names like s
7014	src/pipe/gui/widgets/ResultsHTMLPane.java	111	Avoid variables with short names like j
7015	src/pipe/gui/widgets/ResultsHTMLPane.java	111	Found 'DU'-anomaly for variable 'j' (lines '111'-'126').
7016	src/pipe/gui/widgets/ResultsHTMLPane.java	113	Avoid using if statements without curly braces
7017	src/pipe/gui/widgets/ResultsHTMLPane.java	113	Prefer StringBuffer over += for concatenating strings
7018	src/pipe/gui/widgets/ResultsHTMLPane.java	114	Prefer StringBuffer over += for concatenating strings
7019	src/pipe/gui/widgets/ResultsHTMLPane.java	115	Avoid using if...else statements without curly braces
7020	src/pipe/gui/widgets/ResultsHTMLPane.java	115	Prefer StringBuffer over += for concatenating strings
7021	src/pipe/gui/widgets/ResultsHTMLPane.java	115	Use equals() to compare strings instead of '==' or '!='
7022	src/pipe/gui/widgets/ResultsHTMLPane.java	116	Avoid using if...else statements without curly braces
7023	src/pipe/gui/widgets/ResultsHTMLPane.java	116	Prefer StringBuffer over += for concatenating strings
7024	src/pipe/gui/widgets/ResultsHTMLPane.java	117	Avoid using if...else statements without curly braces
7025	src/pipe/gui/widgets/ResultsHTMLPane.java	117	Prefer StringBuffer over += for concatenating strings
7026	src/pipe/gui/widgets/ResultsHTMLPane.java	118	Avoid using if...else statements without curly braces
7027	src/pipe/gui/widgets/ResultsHTMLPane.java	122	Found 'DU'-anomaly for variable 'j' (lines '122'-'126').
7028	src/pipe/gui/widgets/ResultsHTMLPane.java	127	Found non-transient, non-static member. Please mark as transient or provide accessors.
7029	src/pipe/gui/widgets/ResultsHTMLPane.java	127	Private field 'CopyHandler' could be made final; it is only initialized in the declaration or constructor.
7030	src/pipe/gui/widgets/ResultsHTMLPane.java	127	Variables should start with a lowercase character
7031	src/pipe/gui/widgets/ResultsHTMLPane.java	129	Local variable 'data' could be declared final
7032	src/pipe/gui/widgets/ResultsHTMLPane.java	133	System.out.print is used
7033	src/pipe/gui/widgets/ResultsHTMLPane.java	137	Private field 'SaveHandler' could be made final; it is only initialized in the declaration or constructor.
7034	src/pipe/gui/widgets/ResultsHTMLPane.java	137	Variables should start with a lowercase character
7035	src/pipe/gui/widgets/ResultsHTMLPane.java	141	Local variable 'fileBrowser' could be declared final
7036	src/pipe/gui/widgets/ResultsHTMLPane.java	143	Avoid using if statements without curly braces
7037	src/pipe/gui/widgets/ResultsHTMLPane.java	143	When doing a String.toLowerCase()/toUpperCase() call, use a Locale
7038	src/pipe/gui/widgets/ResultsHTMLPane.java	144	Local variable 'writer' could be declared final
7039	src/pipe/gui/widgets/ResultsHTMLPane.java	145	Local variable 'output' could be declared final
7040	src/pipe/gui/widgets/ResultsHTMLPane.java	157	System.out.print is used
7041	src/pipe/gui/widgets/ResultsHTMLPane.java	161	Avoid variables with short names like e
7042	src/pipe/gui/widgets/ResultsHTMLPane.java	162	Avoid using if statements without curly braces
7043	src/pipe/gui/widgets/ResultsHTMLPane.java	163	Avoid using if...else statements without curly braces
7044	src/pipe/gui/widgets/ResultsHTMLPane.java	168	System.out.print is used
7045	src/pipe/io/AbortDotFileGenerationException.java	10	Parameter 'reason' is not assigned and could be declared final
7046	src/pipe/io/ImmediateAbortException.java	16	Parameter 'reason' is not assigned and could be declared final
7047	src/pipe/io/IncorrectFileFormatException.java	15	Parameter 'format' is not assigned and could be declared final
7048	src/pipe/io/NewRGFileHeader.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
7049	src/pipe/io/NewRGFileHeader.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
7050	src/pipe/io/NewRGFileHeader.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
7051	src/pipe/io/NewRGFileHeader.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
7052	src/pipe/io/NewRGFileHeader.java	18	Avoid excessively long variable names like transitionrecordsize
7053	src/pipe/io/NewRGFileHeader.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
7054	src/pipe/io/NewRGFileHeader.java	19	Avoid excessively long variable names like offsettotransitions
7055	src/pipe/io/NewRGFileHeader.java	26	Avoid variables with short names like ns
7056	src/pipe/io/NewRGFileHeader.java	26	Avoid variables with short names like nt
7057	src/pipe/io/NewRGFileHeader.java	26	Avoid variables with short names like ss
7058	src/pipe/io/NewRGFileHeader.java	26	It is a good practice to call super() in a constructor
7059	src/pipe/io/NewRGFileHeader.java	26	Parameter 'ns' is not assigned and could be declared final
7060	src/pipe/io/NewRGFileHeader.java	26	Parameter 'nt' is not assigned and could be declared final
7061	src/pipe/io/NewRGFileHeader.java	26	Parameter 'offset' is not assigned and could be declared final
7062	src/pipe/io/NewRGFileHeader.java	26	Parameter 'ss' is not assigned and could be declared final
7063	src/pipe/io/NewRGFileHeader.java	26	Parameter 'trs' is not assigned and could be declared final
7064	src/pipe/io/NewRGFileHeader.java	43	Overridable method 'read' called during object construction
7065	src/pipe/io/NewRGFileHeader.java	77	Avoid using if statements without curly braces
7066	src/pipe/io/NewStateRecord.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
7067	src/pipe/io/NewStateRecord.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
7068	src/pipe/io/NewStateRecord.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
7069	src/pipe/io/NewStateRecord.java	19	Document empty constructor
7070	src/pipe/io/NewStateRecord.java	26	Parameter 'newstate' is not assigned and could be declared final
7071	src/pipe/io/NewStateRecord.java	31	Avoid using if...else statements without curly braces
7072	src/pipe/io/NewStateRecord.java	33	Avoid using if...else statements without curly braces
7073	src/pipe/io/NewStateRecord.java	41	Parameter 'opBuf' is not assigned and could be declared final
7074	src/pipe/io/NewStateRecord.java	58	Parameter 'ipfile' is not assigned and could be declared final
7075	src/pipe/io/NewStateRecord.java	58	Parameter 'statesize' is not assigned and could be declared final
7076	src/pipe/io/NewStateRecord.java	68	Returning 'state' may expose an internal array.
7077	src/pipe/io/NewStateRecord.java	75	A getX() method which returns a boolean should be named isX()
7078	src/pipe/io/NewTransitionRecord.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
7079	src/pipe/io/NewTransitionRecord.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
7080	src/pipe/io/NewTransitionRecord.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
7081	src/pipe/io/NewTransitionRecord.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
7082	src/pipe/io/NewTransitionRecord.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
7083	src/pipe/io/NewTransitionRecord.java	30	Avoid variables with short names like r
7084	src/pipe/io/NewTransitionRecord.java	30	Avoid variables with short names like t
7085	src/pipe/io/NewTransitionRecord.java	30	Avoid variables with short names like to
7086	src/pipe/io/NewTransitionRecord.java	30	Parameter 'from' is not assigned and could be declared final
7087	src/pipe/io/NewTransitionRecord.java	30	Parameter 'isFTan' is not assigned and could be declared final
7088	src/pipe/io/NewTransitionRecord.java	30	Parameter 'r' is not assigned and could be declared final
7089	src/pipe/io/NewTransitionRecord.java	30	Parameter 't' is not assigned and could be declared final
7090	src/pipe/io/NewTransitionRecord.java	30	Parameter 'to' is not assigned and could be declared final
7091	src/pipe/io/NewTransitionRecord.java	36	Avoid using if...else statements without curly braces
7092	src/pipe/io/NewTransitionRecord.java	38	Avoid using if...else statements without curly braces
7093	src/pipe/io/NewTransitionRecord.java	46	Avoid variables with short names like r
7094	src/pipe/io/NewTransitionRecord.java	46	Avoid variables with short names like to
7095	src/pipe/io/NewTransitionRecord.java	150	A getX() method which returns a boolean should be named isX()
7096	src/pipe/io/NewTransitionRecord.java	151	Avoid unnecessary if..then..else statements when returning a boolean
7097	src/pipe/io/NewTransitionRecord.java	152	A method should have only one exit point, and that should be the last statement in the method
7098	src/pipe/io/NewTransitionRecord.java	152	Avoid using if...else statements without curly braces
7099	src/pipe/io/NewTransitionRecord.java	154	Avoid using if...else statements without curly braces
7100	src/pipe/io/NewTransitionRecord.java	176	The method name and parameter number are suspiciously close to equals(Object)
7101	src/pipe/io/RGFileHeader.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
7102	src/pipe/io/RGFileHeader.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
7103	src/pipe/io/RGFileHeader.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
7104	src/pipe/io/RGFileHeader.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
7105	src/pipe/io/RGFileHeader.java	20	Avoid excessively long variable names like transitionrecordsize
7106	src/pipe/io/RGFileHeader.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
7107	src/pipe/io/RGFileHeader.java	21	Avoid excessively long variable names like offsettotransitions
7108	src/pipe/io/RGFileHeader.java	28	Avoid variables with short names like ns
7109	src/pipe/io/RGFileHeader.java	28	Avoid variables with short names like nt
7110	src/pipe/io/RGFileHeader.java	28	Avoid variables with short names like ss
7111	src/pipe/io/RGFileHeader.java	28	Parameter 'ns' is not assigned and could be declared final
7112	src/pipe/io/RGFileHeader.java	28	Parameter 'nt' is not assigned and could be declared final
7113	src/pipe/io/RGFileHeader.java	28	Parameter 'offset' is not assigned and could be declared final
7114	src/pipe/io/RGFileHeader.java	28	Parameter 'ss' is not assigned and could be declared final
7115	src/pipe/io/RGFileHeader.java	28	Parameter 'trs' is not assigned and could be declared final
7116	src/pipe/io/RGFileHeader.java	39	Overridable method 'read' called during object construction
7117	src/pipe/io/RGFileHeader.java	62	Avoid using if statements without curly braces
7118	src/pipe/io/StateRecord.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
7119	src/pipe/io/StateRecord.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
7120	src/pipe/io/StateRecord.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
7121	src/pipe/io/StateRecord.java	25	Document empty constructor
7122	src/pipe/io/StateRecord.java	29	Parameter 'newstate' is not assigned and could be declared final
7123	src/pipe/io/StateRecord.java	36	Parameter 'opfile' is not assigned and could be declared final
7124	src/pipe/io/StateRecord.java	46	Parameter 'Tangible' is not assigned and could be declared final
7125	src/pipe/io/StateRecord.java	46	Parameter 'opfile' is not assigned and could be declared final
7126	src/pipe/io/StateRecord.java	57	Parameter 'ipfile' is not assigned and could be declared final
7127	src/pipe/io/StateRecord.java	75	Returning 'state' may expose an internal array.
7128	src/pipe/io/StateRecord.java	82	A getX() method which returns a boolean should be named isX()
7129	src/pipe/io/TransitionRecord.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
7130	src/pipe/io/TransitionRecord.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
7131	src/pipe/io/TransitionRecord.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
7132	src/pipe/io/TransitionRecord.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
7133	src/pipe/io/TransitionRecord.java	36	Avoid variables with short names like r
7134	src/pipe/io/TransitionRecord.java	36	Avoid variables with short names like to
7135	src/pipe/io/TransitionRecord.java	36	Parameter 'from' is not assigned and could be declared final
7136	src/pipe/io/TransitionRecord.java	36	Parameter 'r' is not assigned and could be declared final
7137	src/pipe/io/TransitionRecord.java	36	Parameter 'to' is not assigned and could be declared final
7138	src/pipe/io/TransitionRecord.java	44	Avoid variables with short names like r
7139	src/pipe/io/TransitionRecord.java	44	Avoid variables with short names like to
7140	src/pipe/io/TransitionRecord.java	44	Parameter 'from' is not assigned and could be declared final
7141	src/pipe/io/TransitionRecord.java	44	Parameter 'r' is not assigned and could be declared final
7142	src/pipe/io/TransitionRecord.java	50	Avoid variables with short names like r
7143	src/pipe/io/TransitionRecord.java	152	The method name and parameter number are suspiciously close to equals(Object)
7144	src/pipe/modules/Module.java	13	Avoid modifiers which are implied by the context
7145	src/pipe/modules/Module.java	15	Avoid modifiers which are implied by the context
7146	src/pipe/modules/classification/Classification.java	32	This class has too many methods, consider refactoring it.
7147	src/pipe/modules/classification/Classification.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
7148	src/pipe/modules/classification/Classification.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
7149	src/pipe/modules/classification/Classification.java	39	Parameter 'pnmlData' is not assigned and could be declared final
7150	src/pipe/modules/classification/Classification.java	41	Local variable 'guiDialog' could be declared final
7151	src/pipe/modules/classification/Classification.java	44	Local variable 'contentPane' could be declared final
7152	src/pipe/modules/classification/Classification.java	73	Avoid excessively long variable names like classifyButtonClick
7153	src/pipe/modules/classification/Classification.java	73	Found non-transient, non-static member. Please mark as transient or provide accessors.
7154	src/pipe/modules/classification/Classification.java	73	Use explicit scoping instead of the default package private level
7155	src/pipe/modules/classification/Classification.java	74	Parameter 'arg0' is not assigned and could be declared final
7156	src/pipe/modules/classification/Classification.java	75	Local variable 'sourceDataLayer' could be declared final
7157	src/pipe/modules/classification/Classification.java	76	Avoid variables with short names like s
7158	src/pipe/modules/classification/Classification.java	76	Found 'DU'-anomaly for variable 's' (lines '76'-'88').
7159	src/pipe/modules/classification/Classification.java	77	Avoid using if statements without curly braces
7160	src/pipe/modules/classification/Classification.java	78	Avoid if (x != y) ..; else ..;
7161	src/pipe/modules/classification/Classification.java	78	Avoid using if...else statements without curly braces
7162	src/pipe/modules/classification/Classification.java	78	Prefer StringBuffer over += for concatenating strings
7163	src/pipe/modules/classification/Classification.java	79	Avoid using if...else statements without curly braces
7164	src/pipe/modules/classification/Classification.java	79	Prefer StringBuffer over += for concatenating strings
7165	src/pipe/modules/classification/Classification.java	80	Do not add empty strings
7166	src/pipe/modules/classification/Classification.java	81	Do not add empty strings
7167	src/pipe/modules/classification/Classification.java	82	Do not add empty strings
7168	src/pipe/modules/classification/Classification.java	83	Do not add empty strings
7169	src/pipe/modules/classification/Classification.java	84	Do not add empty strings
7170	src/pipe/modules/classification/Classification.java	109	Parameter 'pnmlData' is not assigned and could be declared final
7171	src/pipe/modules/classification/Classification.java	112	Local variable 'transitionsCount' could be declared final
7172	src/pipe/modules/classification/Classification.java	114	Avoid using if statements without curly braces
7173	src/pipe/modules/classification/Classification.java	115	Avoid using for statements without curly braces
7174	src/pipe/modules/classification/Classification.java	116	Avoid using if statements without curly braces
7175	src/pipe/modules/classification/Classification.java	117	A method should have only one exit point, and that should be the last statement in the method
7176	src/pipe/modules/classification/Classification.java	139	Parameter 'pnmlData' is not assigned and could be declared final
7177	src/pipe/modules/classification/Classification.java	143	Local variable 'placeCount' could be declared final
7178	src/pipe/modules/classification/Classification.java	144	Avoid using if statements without curly braces
7179	src/pipe/modules/classification/Classification.java	145	Avoid using for statements without curly braces
7180	src/pipe/modules/classification/Classification.java	146	Avoid using if statements without curly braces
7181	src/pipe/modules/classification/Classification.java	147	A method should have only one exit point, and that should be the last statement in the method
7182	src/pipe/modules/classification/Classification.java	175	Parameter 'pnmlData' is not assigned and could be declared final
7183	src/pipe/modules/classification/Classification.java	182	Avoid using for statements without curly braces
7184	src/pipe/modules/classification/Classification.java	187	A method should have only one exit point, and that should be the last statement in the method
7185	src/pipe/modules/classification/Classification.java	224	Avoid using for statements without curly braces
7186	src/pipe/modules/classification/Classification.java	229	A method should have only one exit point, and that should be the last statement in the method
7187	src/pipe/modules/classification/Classification.java	271	Avoid using for statements without curly braces
7188	src/pipe/modules/classification/Classification.java	280	A method should have only one exit point, and that should be the last statement in the method
7189	src/pipe/modules/classification/Classification.java	356	Found 'DD'-anomaly for variable 'count' (lines '356'-'360').
7190	src/pipe/modules/classification/Classification.java	356	Found 'DU'-anomaly for variable 'count' (lines '356'-'363').
7191	src/pipe/modules/classification/Classification.java	360	Found 'DD'-anomaly for variable 'count' (lines '360'-'360').
7192	src/pipe/modules/classification/Classification.java	361	Avoid using if...else statements without curly braces
7193	src/pipe/modules/classification/Classification.java	369	Found 'DD'-anomaly for variable 'count' (lines '369'-'374').
7194	src/pipe/modules/classification/Classification.java	369	Found 'DU'-anomaly for variable 'count' (lines '369'-'377').
7195	src/pipe/modules/classification/Classification.java	374	Found 'DD'-anomaly for variable 'count' (lines '374'-'374').
7196	src/pipe/modules/classification/Classification.java	383	Found 'DD'-anomaly for variable 'count' (lines '383'-'388').
7197	src/pipe/modules/classification/Classification.java	383	Found 'DU'-anomaly for variable 'count' (lines '383'-'391').
7198	src/pipe/modules/classification/Classification.java	388	Found 'DD'-anomaly for variable 'count' (lines '388'-'388').
7199	src/pipe/modules/classification/Classification.java	399	Found 'DD'-anomaly for variable 'count' (lines '399'-'404').
7200	src/pipe/modules/classification/Classification.java	399	Found 'DU'-anomaly for variable 'count' (lines '399'-'407').
7201	src/pipe/modules/classification/Classification.java	404	Found 'DD'-anomaly for variable 'count' (lines '404'-'404').
7202	src/pipe/modules/classification/Classification.java	416	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
7203	src/pipe/modules/classification/Classification.java	416	Avoid instantiating new objects inside loops
7204	src/pipe/modules/classification/Classification.java	441	Avoid variables with short names like A
7205	src/pipe/modules/classification/Classification.java	441	Avoid variables with short names like B
7206	src/pipe/modules/classification/Classification.java	443	Found 'DD'-anomaly for variable 'isSubsetOf' (lines '443'-'461').
7207	src/pipe/modules/classification/Classification.java	443	Found 'DD'-anomaly for variable 'isSubsetOf' (lines '443'-'463').
7208	src/pipe/modules/classification/Classification.java	447	Avoid variables with short names like AA
7209	src/pipe/modules/classification/Classification.java	449	Avoid variables with short names like BB
7210	src/pipe/modules/classification/Classification.java	461	Avoid using if...else statements without curly braces
7211	src/pipe/modules/classification/Classification.java	463	Avoid using if...else statements without curly braces
7212	src/pipe/modules/classification/Classification.java	486	Found 'DD'-anomaly for variable 'c' (lines '486'-'489').
7213	src/pipe/modules/classification/Classification.java	489	Found 'DD'-anomaly for variable 'c' (lines '489'-'489').
7214	src/pipe/modules/classification/Classification.java	496	Found 'DU'-anomaly for variable 'isSubset' (lines '496'-'515').
7215	src/pipe/modules/classification/Classification.java	502	Found 'DD'-anomaly for variable 'elementExists' (lines '502'-'505').
7216	src/pipe/modules/clientCommon/HTMLPane.java	1	Package name contains upper case characters
7217	src/pipe/modules/clientCommon/HTMLPane.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
7218	src/pipe/modules/clientCommon/HTMLPane.java	19	Use explicit scoping instead of the default package private level
7219	src/pipe/modules/clientCommon/HTMLPane.java	22	Parameter 'title' is not assigned and could be declared final
7220	src/pipe/modules/clientCommon/HTMLPane.java	31	Local variable 'scroller' could be declared final
7221	src/pipe/modules/clientCommon/HTMLPane.java	38	Parameter 'text' is not assigned and could be declared final
7222	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	1	Package name contains upper case characters
7223	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
7224	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
7225	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
7226	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	46	Found non-transient, non-static member. Please mark as transient or provide accessors.
7227	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
7228	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	56	Parameter 'currNet' is not assigned and could be declared final
7229	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	56	Parameter 'title' is not assigned and could be declared final
7230	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	75	Avoid if (x != y) ..; else ..;
7231	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	87	Avoid using if statements without curly braces
7232	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	90	Private field 'useCurrentClick' could be made final; it is only initialized in the declaration or constructor.
7233	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	91	Avoid variables with short names like e
7234	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	91	Parameter 'e' is not assigned and could be declared final
7235	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	93	Local variable 'enabled' could be declared final
7236	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	99	Avoid using if...else statements without curly braces
7237	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	101	Avoid using if...else statements without curly braces
7238	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	109	Private field 'browseButtonClick' could be made final; it is only initialized in the declaration or constructor.
7239	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	110	Parameter 'event' is not assigned and could be declared final
7240	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	112	Local variable 'pnmlFile' could be declared final
7241	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	115	Local variable 'fileName' could be declared final
7242	src/pipe/modules/clientCommon/PetriNetBrowsePanel.java	132	Document empty method
7243	src/pipe/modules/clientCommon/ServerInfo.java	1	Package name contains upper case characters
7244	src/pipe/modules/clientCommon/ServerInfo.java	5	Found non-transient, non-static member. Please mark as transient or provide accessors.
7245	src/pipe/modules/clientCommon/ServerInfo.java	6	Found non-transient, non-static member. Please mark as transient or provide accessors.
7246	src/pipe/modules/clientCommon/ServerInfo.java	8	Parameter 'address' is not assigned and could be declared final
7247	src/pipe/modules/clientCommon/ServerInfo.java	8	Parameter 'port' is not assigned and could be declared final
7248	src/pipe/modules/clientCommon/ServerList.java	1	Package name contains upper case characters
7249	src/pipe/modules/clientCommon/ServerList.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
7250	src/pipe/modules/clientCommon/ServerList.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
7251	src/pipe/modules/clientCommon/ServerList.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
7252	src/pipe/modules/clientCommon/ServerList.java	30	Use explicit scoping instead of the default package private level
7253	src/pipe/modules/clientCommon/ServerList.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
7254	src/pipe/modules/clientCommon/ServerList.java	31	Use explicit scoping instead of the default package private level
7255	src/pipe/modules/clientCommon/ServerList.java	38	Parameter 'filename' is not assigned and could be declared final
7256	src/pipe/modules/clientCommon/ServerList.java	42	Local variable 'serverList' could be declared final
7257	src/pipe/modules/clientCommon/ServerList.java	48	Avoid assignments in operands
7258	src/pipe/modules/clientCommon/ServerList.java	55	System.out.print is used
7259	src/pipe/modules/clientCommon/ServerList.java	58	Overridable method 'add' called during object construction
7260	src/pipe/modules/clientCommon/ServerList.java	63	System.out.print is used
7261	src/pipe/modules/clientCommon/ServerList.java	64	Avoid empty catch blocks
7262	src/pipe/modules/clientCommon/ServerList.java	67	Parameter 'index' is not assigned and could be declared final
7263	src/pipe/modules/clientCommon/ServerList.java	75	Parameter 'serverAddr' is not assigned and could be declared final
7264	src/pipe/modules/clientCommon/ServerList.java	75	Parameter 'serverPort' is not assigned and could be declared final
7265	src/pipe/modules/clientCommon/ServerList.java	76	Avoid variables with short names like i
7266	src/pipe/modules/clientCommon/ServerList.java	76	Local variable 'i' could be declared final
7267	src/pipe/modules/clientCommon/ServerList.java	78	Local variable 'server' could be declared final
7268	src/pipe/modules/clientCommon/ServerList.java	79	Local variable 'address' could be declared final
7269	src/pipe/modules/clientCommon/ServerList.java	80	Local variable 'port' could be declared final
7270	src/pipe/modules/clientCommon/ServerList.java	81	Avoid using if statements without curly braces
7271	src/pipe/modules/clientCommon/ServerList.java	82	A method should have only one exit point, and that should be the last statement in the method
7272	src/pipe/modules/clientCommon/ServerList.java	87	Parameter 'newAddr' is not assigned and could be declared final
7273	src/pipe/modules/clientCommon/ServerList.java	92	An empty statement (semicolon) not part of a loop
7274	src/pipe/modules/clientCommon/ServerList.java	92	Found 'DD'-anomaly for variable 'toBeRemoved' (lines '92'-'100').
7275	src/pipe/modules/clientCommon/ServerList.java	93	Avoid variables with short names like i
7276	src/pipe/modules/clientCommon/ServerList.java	98	Avoid excessively long variable names like serverAddressWithPort
7277	src/pipe/modules/clientCommon/ServerList.java	99	Avoid using if statements without curly braces
7278	src/pipe/modules/clientCommon/ServerList.java	100	Found 'DD'-anomaly for variable 'toBeRemoved' (lines '100'-'100').
7279	src/pipe/modules/clientCommon/ServerList.java	102	Avoid using if statements without curly braces
7280	src/pipe/modules/clientCommon/ServerList.java	109	Avoid using for statements without curly braces
7281	src/pipe/modules/clientCommon/ServerList.java	114	System.out.print is used
7282	src/pipe/modules/clientCommon/ServerList.java	130	Avoid using if statements without curly braces
7283	src/pipe/modules/clientCommon/ServerList.java	133	Avoid using if statements without curly braces
7284	src/pipe/modules/clientCommon/ServerPanel.java	1	Package name contains upper case characters
7285	src/pipe/modules/clientCommon/ServerPanel.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
7286	src/pipe/modules/clientCommon/ServerPanel.java	31	Private field 'parentDialog' could be made final; it is only initialized in the declaration or constructor.
7287	src/pipe/modules/clientCommon/ServerPanel.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
7288	src/pipe/modules/clientCommon/ServerPanel.java	32	It is somewhat confusing to have a field name matching the declaring class name
7289	src/pipe/modules/clientCommon/ServerPanel.java	32	Private field 'serverPanel' could be made final; it is only initialized in the declaration or constructor.
7290	src/pipe/modules/clientCommon/ServerPanel.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
7291	src/pipe/modules/clientCommon/ServerPanel.java	33	Private field 'serverlist' could be made final; it is only initialized in the declaration or constructor.
7292	src/pipe/modules/clientCommon/ServerPanel.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
7293	src/pipe/modules/clientCommon/ServerPanel.java	34	Private field 'serverListCombo' could be made final; it is only initialized in the declaration or constructor.
7294	src/pipe/modules/clientCommon/ServerPanel.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
7295	src/pipe/modules/clientCommon/ServerPanel.java	35	Private field 'addButton' could be made final; it is only initialized in the declaration or constructor.
7296	src/pipe/modules/clientCommon/ServerPanel.java	44	Parameter 'parent' is not assigned and could be declared final
7297	src/pipe/modules/clientCommon/ServerPanel.java	49	This statement may have some unnecessary parentheses
7298	src/pipe/modules/clientCommon/ServerPanel.java	96	Use explicit scoping instead of the default package private level
7299	src/pipe/modules/clientCommon/ServerPanel.java	99	Parameter 'event' is not assigned and could be declared final
7300	src/pipe/modules/clientCommon/ServerPanel.java	109	Local variable 'selectedItem' could be declared final
7301	src/pipe/modules/clientCommon/ServerPanel.java	128	Local variable 'addServ' could be declared final
7302	src/pipe/modules/clientCommon/ServerPanel.java	129	Local variable 'panel' could be declared final
7303	src/pipe/modules/clientCommon/ServerPanel.java	135	Local variable 'servAddr' could be declared final
7304	src/pipe/modules/clientCommon/ServerPanel.java	144	Local variable 'servPort' could be declared final
7305	src/pipe/modules/clientCommon/ServerPanel.java	183	Use explicit scoping instead of the default package private level
7306	src/pipe/modules/clientCommon/ServerPanel.java	184	Parameter 'event' is not assigned and could be declared final
7307	src/pipe/modules/clientCommon/ServerPanel.java	193	Found 'DD'-anomaly for variable 'servAdd' (lines '193'-'196').
7308	src/pipe/modules/clientCommon/ServerPanel.java	212	System.out.print is used
7309	src/pipe/modules/clientCommon/SocketIO.java	12	Package name contains upper case characters
7310	src/pipe/modules/clientCommon/SocketIO.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
7311	src/pipe/modules/clientCommon/SocketIO.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
7312	src/pipe/modules/clientCommon/SocketIO.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
7313	src/pipe/modules/clientCommon/SocketIO.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
7314	src/pipe/modules/clientCommon/SocketIO.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
7315	src/pipe/modules/clientCommon/SocketIO.java	65	System.out.print is used
7316	src/pipe/modules/clientCommon/SocketIO.java	67	Avoid using if...else statements without curly braces
7317	src/pipe/modules/clientCommon/SocketIO.java	69	Avoid using if...else statements without curly braces
7318	src/pipe/modules/clientCommon/SocketIO.java	71	Avoid using if...else statements without curly braces
7319	src/pipe/modules/clientCommon/SocketIO.java	72	Avoid using if...else statements without curly braces
7320	src/pipe/modules/clientCommon/SocketIO.java	78	Found 'DD'-anomaly for variable 'statusMsg' (lines '78'-'80').
7321	src/pipe/modules/clientCommon/SocketIO.java	89	Found 'DD'-anomaly for variable 'fileLine' (lines '89'-'92').
7322	src/pipe/modules/clientCommon/SocketIO.java	95	Avoid concatenating nonliterals in a StringBuffer constructor or append().
7323	src/pipe/modules/clientCommon/SocketIO.java	111	Assigning an Object to null is a code smell. Consider refactoring.
7324	src/pipe/modules/clientCommon/SocketIO.java	117	Assigning an Object to null is a code smell. Consider refactoring.
7325	src/pipe/modules/comparison/Comparison.java	31	The class 'Comparison' has a Cyclomatic Complexity of 22 (Highest = 46).
7326	src/pipe/modules/comparison/Comparison.java	34	The String literal "Comparison" appears 4 times in this file; the first occurrence is on line 34
7327	src/pipe/modules/comparison/Comparison.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
7328	src/pipe/modules/comparison/Comparison.java	37	Avoid excessively long variable names like comparisonFilePanel
7329	src/pipe/modules/comparison/Comparison.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
7330	src/pipe/modules/comparison/Comparison.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
7331	src/pipe/modules/comparison/Comparison.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
7332	src/pipe/modules/comparison/Comparison.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
7333	src/pipe/modules/comparison/Comparison.java	42	Avoid excessively long variable names like comparePlaceMarking
7334	src/pipe/modules/comparison/Comparison.java	43	Avoid excessively long variable names like compareTransitionID
7335	src/pipe/modules/comparison/Comparison.java	44	Avoid excessively long variable names like compareTransitionName
7336	src/pipe/modules/comparison/Comparison.java	45	Avoid excessively long variable names like compareTransitionRate
7337	src/pipe/modules/comparison/Comparison.java	50	Parameter 'pnmlData' is not assigned and could be declared final
7338	src/pipe/modules/comparison/Comparison.java	51	Local variable 'guiDialog' could be declared final
7339	src/pipe/modules/comparison/Comparison.java	54	Local variable 'contentPane' could be declared final
7340	src/pipe/modules/comparison/Comparison.java	62	Local variable 'placePanel' could be declared final
7341	src/pipe/modules/comparison/Comparison.java	66	The String literal "Name" appears 6 times in this file; the first occurrence is on line 66
7342	src/pipe/modules/comparison/Comparison.java	68	Local variable 'transPanel' could be declared final
7343	src/pipe/modules/comparison/Comparison.java	74	Local variable 'arcPanel' could be declared final
7344	src/pipe/modules/comparison/Comparison.java	110	Use explicit scoping instead of the default package private level
7345	src/pipe/modules/comparison/Comparison.java	111	Parameter 'arg0' is not assigned and could be declared final
7346	src/pipe/modules/comparison/Comparison.java	111	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
7347	src/pipe/modules/comparison/Comparison.java	111	The method actionPerformed() has an NPath complexity of 240
7348	src/pipe/modules/comparison/Comparison.java	114	Avoid variables with short names like s
7349	src/pipe/modules/comparison/Comparison.java	114	Found 'DU'-anomaly for variable 's' (lines '114'-'125').
7350	src/pipe/modules/comparison/Comparison.java	115	Avoid using if statements without curly braces
7351	src/pipe/modules/comparison/Comparison.java	116	Avoid if (x != y) ..; else ..;
7352	src/pipe/modules/comparison/Comparison.java	116	Avoid using if...else statements without curly braces
7353	src/pipe/modules/comparison/Comparison.java	116	Prefer StringBuffer over += for concatenating strings
7354	src/pipe/modules/comparison/Comparison.java	118	Avoid using if statements without curly braces
7355	src/pipe/modules/comparison/Comparison.java	119	Prefer StringBuffer over += for concatenating strings
7356	src/pipe/modules/comparison/Comparison.java	120	Avoid using if statements without curly braces
7357	src/pipe/modules/comparison/Comparison.java	121	Prefer StringBuffer over += for concatenating strings
7358	src/pipe/modules/comparison/Comparison.java	122	Avoid using if statements without curly braces
7359	src/pipe/modules/comparison/Comparison.java	123	Prefer StringBuffer over += for concatenating strings
7360	src/pipe/modules/comparison/Comparison.java	128	Parameter 'compareID' is not assigned and could be declared final
7361	src/pipe/modules/comparison/Comparison.java	128	Parameter 'compareMarking' is not assigned and could be declared final
7362	src/pipe/modules/comparison/Comparison.java	128	Parameter 'compareName' is not assigned and could be declared final
7363	src/pipe/modules/comparison/Comparison.java	128	The method 'comparePlaces' has a Cyclomatic Complexity of 36.
7364	src/pipe/modules/comparison/Comparison.java	128	The method comparePlaces() has an NPath complexity of 36100
7365	src/pipe/modules/comparison/Comparison.java	129	Avoid variables with short names like i
7366	src/pipe/modules/comparison/Comparison.java	129	Avoid variables with short names like j
7367	src/pipe/modules/comparison/Comparison.java	129	Avoid variables with short names like k
7368	src/pipe/modules/comparison/Comparison.java	129	Found 'DD'-anomaly for variable 'i' (lines '129'-'137').
7369	src/pipe/modules/comparison/Comparison.java	129	Found 'DD'-anomaly for variable 'j' (lines '129'-'140').
7370	src/pipe/modules/comparison/Comparison.java	129	Found 'DD'-anomaly for variable 'k' (lines '129'-'138').
7371	src/pipe/modules/comparison/Comparison.java	130	Avoid variables with short names like s
7372	src/pipe/modules/comparison/Comparison.java	138	Found 'DD'-anomaly for variable 'k' (lines '138'-'143').
7373	src/pipe/modules/comparison/Comparison.java	141	Avoid using if statements without curly braces
7374	src/pipe/modules/comparison/Comparison.java	142	These nested if statements could be combined
7375	src/pipe/modules/comparison/Comparison.java	143	Found 'DD'-anomaly for variable 'k' (lines '143'-'143').
7376	src/pipe/modules/comparison/Comparison.java	157	Prefer StringBuffer over += for concatenating strings
7377	src/pipe/modules/comparison/Comparison.java	158	The String literal " (match)" appears 9 times in this file; the first occurrence is on line 158
7378	src/pipe/modules/comparison/Comparison.java	159	The String literal ": Source = \"" appears 9 times in this file; the first occurrence is on line 159
7379	src/pipe/modules/comparison/Comparison.java	159	The String literal "\" Comparison = \"" appears 7 times in this file; the first occurrence is on line 159
7380	src/pipe/modules/comparison/Comparison.java	172	Assigning an Object to null is a code smell. Consider refactoring.
7381	src/pipe/modules/comparison/Comparison.java	173	Assigning an Object to null is a code smell. Consider refactoring.
7382	src/pipe/modules/comparison/Comparison.java	179	Avoid using for statements without curly braces
7383	src/pipe/modules/comparison/Comparison.java	189	Avoid using for statements without curly braces
7384	src/pipe/modules/comparison/Comparison.java	201	The method 'compareTransitions' has a Cyclomatic Complexity of 36.
7385	src/pipe/modules/comparison/Comparison.java	201	The method compareTransitions() has an NPath complexity of 36100
7386	src/pipe/modules/comparison/Comparison.java	202	Found 'DD'-anomaly for variable 'i' (lines '202'-'210').
7387	src/pipe/modules/comparison/Comparison.java	202	Found 'DD'-anomaly for variable 'j' (lines '202'-'213').
7388	src/pipe/modules/comparison/Comparison.java	202	Found 'DD'-anomaly for variable 'k' (lines '202'-'211').
7389	src/pipe/modules/comparison/Comparison.java	211	Found 'DD'-anomaly for variable 'k' (lines '211'-'216').
7390	src/pipe/modules/comparison/Comparison.java	215	These nested if statements could be combined
7391	src/pipe/modules/comparison/Comparison.java	216	Found 'DD'-anomaly for variable 'k' (lines '216'-'216').
7392	src/pipe/modules/comparison/Comparison.java	245	Assigning an Object to null is a code smell. Consider refactoring.
7393	src/pipe/modules/comparison/Comparison.java	246	Assigning an Object to null is a code smell. Consider refactoring.
7394	src/pipe/modules/comparison/Comparison.java	252	Avoid using for statements without curly braces
7395	src/pipe/modules/comparison/Comparison.java	262	Avoid using for statements without curly braces
7396	src/pipe/modules/comparison/Comparison.java	274	The method 'compareArcs' has a Cyclomatic Complexity of 46.
7397	src/pipe/modules/comparison/Comparison.java	274	The method compareArcs() has an NPath complexity of 94500
7398	src/pipe/modules/comparison/Comparison.java	275	Found 'DD'-anomaly for variable 'i' (lines '275'-'283').
7399	src/pipe/modules/comparison/Comparison.java	275	Found 'DD'-anomaly for variable 'j' (lines '275'-'287').
7400	src/pipe/modules/comparison/Comparison.java	275	Found 'DD'-anomaly for variable 'k' (lines '275'-'284').
7401	src/pipe/modules/comparison/Comparison.java	284	Found 'DD'-anomaly for variable 'k' (lines '284'-'302').
7402	src/pipe/modules/comparison/Comparison.java	298	These nested if statements could be combined
7403	src/pipe/modules/comparison/Comparison.java	302	Found 'DD'-anomaly for variable 'k' (lines '302'-'302').
7404	src/pipe/modules/comparison/Comparison.java	337	Assigning an Object to null is a code smell. Consider refactoring.
7405	src/pipe/modules/comparison/Comparison.java	344	Avoid using for statements without curly braces
7406	src/pipe/modules/dnamaca/Dnamaca.java	1	A high number of imports can indicate a high degree of coupling within an object.
7407	src/pipe/modules/dnamaca/Dnamaca.java	40	This class has too many methods, consider refactoring it.
7408	src/pipe/modules/dnamaca/Dnamaca.java	40	Too many fields
7409	src/pipe/modules/dnamaca/Dnamaca.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
7410	src/pipe/modules/dnamaca/Dnamaca.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
7411	src/pipe/modules/dnamaca/Dnamaca.java	43	It is somewhat confusing to have a field name with the same name as a method
7412	src/pipe/modules/dnamaca/Dnamaca.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
7413	src/pipe/modules/dnamaca/Dnamaca.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
7414	src/pipe/modules/dnamaca/Dnamaca.java	46	Variables that are final and static should be in all caps.
7415	src/pipe/modules/dnamaca/Dnamaca.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
7416	src/pipe/modules/dnamaca/Dnamaca.java	53	Avoid using implementation types like 'ArrayList'; use the interface instead
7417	src/pipe/modules/dnamaca/Dnamaca.java	53	Avoid using implementation types like 'ArrayList'; use the interface instead
7418	src/pipe/modules/dnamaca/Dnamaca.java	53	Private field 'resultsX' could be made final; it is only initialized in the declaration or constructor.
7419	src/pipe/modules/dnamaca/Dnamaca.java	54	Avoid using implementation types like 'ArrayList'; use the interface instead
7420	src/pipe/modules/dnamaca/Dnamaca.java	54	Avoid using implementation types like 'ArrayList'; use the interface instead
7421	src/pipe/modules/dnamaca/Dnamaca.java	54	Private field 'resultsY' could be made final; it is only initialized in the declaration or constructor.
7422	src/pipe/modules/dnamaca/Dnamaca.java	57	Avoid excessively long variable names like urtaExecutablePath
7423	src/pipe/modules/dnamaca/Dnamaca.java	59	Avoid excessively long variable names like jtfTargetCondition
7424	src/pipe/modules/dnamaca/Dnamaca.java	60	Avoid excessively long variable names like jtfSourceCondition
7425	src/pipe/modules/dnamaca/Dnamaca.java	77	Parameter '_pnmldata' is not assigned and could be declared final
7426	src/pipe/modules/dnamaca/Dnamaca.java	85	Local variable 'contentPane' could be declared final
7427	src/pipe/modules/dnamaca/Dnamaca.java	94	Local variable 'optionsPanel' could be declared final
7428	src/pipe/modules/dnamaca/Dnamaca.java	97	Local variable 'topPanel' could be declared final
7429	src/pipe/modules/dnamaca/Dnamaca.java	106	Local variable 'bottomPanel' could be declared final
7430	src/pipe/modules/dnamaca/Dnamaca.java	139	Local variable 'buttonLabels' could be declared final
7431	src/pipe/modules/dnamaca/Dnamaca.java	151	Use explicit scoping instead of the default package private level
7432	src/pipe/modules/dnamaca/Dnamaca.java	152	Parameter 'arg0' is not assigned and could be declared final
7433	src/pipe/modules/dnamaca/Dnamaca.java	153	Avoid if (x != y) ..; else ..;
7434	src/pipe/modules/dnamaca/Dnamaca.java	157	Avoid if (x != y) ..; else ..;
7435	src/pipe/modules/dnamaca/Dnamaca.java	166	Avoid unused local variables such as 'dnamaca'.
7436	src/pipe/modules/dnamaca/Dnamaca.java	166	Found 'DU'-anomaly for variable 'dnamaca' (lines '166'-'172').
7437	src/pipe/modules/dnamaca/Dnamaca.java	168	System.out.print is used
7438	src/pipe/modules/dnamaca/Dnamaca.java	169	Avoid printStackTrace(); use a logger call instead.
7439	src/pipe/modules/dnamaca/Dnamaca.java	175	Use explicit scoping instead of the default package private level
7440	src/pipe/modules/dnamaca/Dnamaca.java	176	Parameter 'arg0' is not assigned and could be declared final
7441	src/pipe/modules/dnamaca/Dnamaca.java	177	Avoid if (x != y) ..; else ..;
7442	src/pipe/modules/dnamaca/Dnamaca.java	224	The String literal "}\n" appears 13 times in this file; the first occurrence is on line 224
7443	src/pipe/modules/dnamaca/Dnamaca.java	241	The String literal "}{\n" appears 4 times in this file; the first occurrence is on line 241
7444	src/pipe/modules/dnamaca/Dnamaca.java	264	The String literal "\t}\n" appears 4 times in this file; the first occurrence is on line 264
7445	src/pipe/modules/dnamaca/Dnamaca.java	268	Avoid unused private methods such as 'performance()'.
7446	src/pipe/modules/dnamaca/Dnamaca.java	311	Parameter 'transitionNum' is not assigned and could be declared final
7447	src/pipe/modules/dnamaca/Dnamaca.java	312	Avoid instantiating String objects; this is usually unnecessary.
7448	src/pipe/modules/dnamaca/Dnamaca.java	314	Avoid using if statements without curly braces
7449	src/pipe/modules/dnamaca/Dnamaca.java	315	Prefer StringBuffer over += for concatenating strings
7450	src/pipe/modules/dnamaca/Dnamaca.java	316	Avoid using while statements without curly braces
7451	src/pipe/modules/dnamaca/Dnamaca.java	317	Prefer StringBuffer over += for concatenating strings
7452	src/pipe/modules/dnamaca/Dnamaca.java	323	A method should have only one exit point, and that should be the last statement in the method
7453	src/pipe/modules/dnamaca/Dnamaca.java	323	Avoid using if statements without curly braces
7454	src/pipe/modules/dnamaca/Dnamaca.java	328	A getX() method which returns a boolean should be named isX()
7455	src/pipe/modules/dnamaca/Dnamaca.java	329	Avoid variables with short names like r
7456	src/pipe/modules/dnamaca/Dnamaca.java	331	Avoid variables with short names like p
7457	src/pipe/modules/dnamaca/Dnamaca.java	334	A method should have only one exit point, and that should be the last statement in the method
7458	src/pipe/modules/dnamaca/Dnamaca.java	337	Avoid variables with short names like p
7459	src/pipe/modules/dnamaca/Dnamaca.java	340	Avoid variables with short names like ch
7460	src/pipe/modules/dnamaca/Dnamaca.java	342	Avoid assignments in operands
7461	src/pipe/modules/dnamaca/Dnamaca.java	343	Prefer StringBuffer over += for concatenating strings
7462	src/pipe/modules/dnamaca/Dnamaca.java	349	Avoid printStackTrace(); use a logger call instead.
7463	src/pipe/modules/dnamaca/Dnamaca.java	355	Private field 'progressMonitor' could be made final; it is only initialized in the declaration or constructor.
7464	src/pipe/modules/dnamaca/Dnamaca.java	356	Private field 'timer' could be made final; it is only initialized in the declaration or constructor.
7465	src/pipe/modules/dnamaca/Dnamaca.java	357	Private field 'task' could be made final; it is only initialized in the declaration or constructor.
7466	src/pipe/modules/dnamaca/Dnamaca.java	375	Parameter 'evt' is not assigned and could be declared final
7467	src/pipe/modules/dnamaca/Dnamaca.java	381	To be compliant to J2EE, a webapp should not use any thread.
7468	src/pipe/modules/dnamaca/Dnamaca.java	403	Avoid using short method names
7469	src/pipe/modules/dnamaca/Dnamaca.java	403	Use explicit scoping instead of the default package private level
7470	src/pipe/modules/dnamaca/Dnamaca.java	405	Found 'DU'-anomaly for variable 'worker' (lines '405'-'411').
7471	src/pipe/modules/dnamaca/Dnamaca.java	405	Found 'DU'-anomaly for variable 'worker' (lines '405'-'411').
7472	src/pipe/modules/dnamaca/Dnamaca.java	413	Use explicit scoping instead of the default package private level
7473	src/pipe/modules/dnamaca/Dnamaca.java	417	Use explicit scoping instead of the default package private level
7474	src/pipe/modules/dnamaca/Dnamaca.java	422	Avoid unnecessary if..then..else statements when returning a boolean
7475	src/pipe/modules/dnamaca/Dnamaca.java	423	A method should have only one exit point, and that should be the last statement in the method
7476	src/pipe/modules/dnamaca/Dnamaca.java	423	Avoid using if...else statements without curly braces
7477	src/pipe/modules/dnamaca/Dnamaca.java	425	Avoid using if...else statements without curly braces
7478	src/pipe/modules/dnamaca/Dnamaca.java	432	The class 'ActualTask' has a Cyclomatic Complexity of 16 (Highest = 15).
7479	src/pipe/modules/dnamaca/Dnamaca.java	433	The constructor 'ActualTask' has a Cyclomatic Complexity of 15.
7480	src/pipe/modules/dnamaca/Dnamaca.java	434	Avoid variables with short names like r
7481	src/pipe/modules/dnamaca/Dnamaca.java	441	Avoid assignments in operands
7482	src/pipe/modules/dnamaca/Dnamaca.java	442	Prefer StringBuffer over += for concatenating strings
7483	src/pipe/modules/dnamaca/Dnamaca.java	458	Avoid assignments in operands
7484	src/pipe/modules/dnamaca/Dnamaca.java	459	Prefer StringBuffer over += for concatenating strings
7485	src/pipe/modules/dnamaca/Dnamaca.java	469	Avoid instantiating new objects inside loops
7486	src/pipe/modules/dnamaca/Dnamaca.java	470	Avoid instantiating new objects inside loops
7487	src/pipe/modules/dnamaca/Dnamaca.java	477	Avoid printStackTrace(); use a logger call instead.
7488	src/pipe/modules/dnamaca/SwingWorker.java	17	Abstract classes should be named AbstractXXX
7489	src/pipe/modules/dnamaca/SwingWorker.java	19	Avoid unused private fields such as 'thread'.
7490	src/pipe/modules/dnamaca/SwingWorker.java	19	To be compliant to J2EE, a webapp should not use any thread.
7491	src/pipe/modules/dnamaca/SwingWorker.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
7492	src/pipe/modules/dnamaca/SwingWorker.java	26	To be compliant to J2EE, a webapp should not use any thread.
7493	src/pipe/modules/dnamaca/SwingWorker.java	27	Avoid variables with short names like t
7494	src/pipe/modules/dnamaca/SwingWorker.java	27	Parameter 't' is not assigned and could be declared final
7495	src/pipe/modules/dnamaca/SwingWorker.java	27	To be compliant to J2EE, a webapp should not use any thread.
7496	src/pipe/modules/dnamaca/SwingWorker.java	28	To be compliant to J2EE, a webapp should not use any thread.
7497	src/pipe/modules/dnamaca/SwingWorker.java	28	Use block level rather than method level synchronization
7498	src/pipe/modules/dnamaca/SwingWorker.java	28	Use explicit scoping instead of the default package private level
7499	src/pipe/modules/dnamaca/SwingWorker.java	29	Assigning an Object to null is a code smell. Consider refactoring.
7500	src/pipe/modules/dnamaca/SwingWorker.java	29	Use block level rather than method level synchronization
7501	src/pipe/modules/dnamaca/SwingWorker.java	29	Use explicit scoping instead of the default package private level
7502	src/pipe/modules/dnamaca/SwingWorker.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
7503	src/pipe/modules/dnamaca/SwingWorker.java	32	Private field 'threadVar' could be made final; it is only initialized in the declaration or constructor.
7504	src/pipe/modules/dnamaca/SwingWorker.java	38	Use block level rather than method level synchronization
7505	src/pipe/modules/dnamaca/SwingWorker.java	45	Avoid variables with short names like x
7506	src/pipe/modules/dnamaca/SwingWorker.java	45	Parameter 'x' is not assigned and could be declared final
7507	src/pipe/modules/dnamaca/SwingWorker.java	45	Use block level rather than method level synchronization
7508	src/pipe/modules/dnamaca/SwingWorker.java	58	An empty method in an abstract class should be abstract instead
7509	src/pipe/modules/dnamaca/SwingWorker.java	58	Document empty method
7510	src/pipe/modules/dnamaca/SwingWorker.java	66	Avoid variables with short names like t
7511	src/pipe/modules/dnamaca/SwingWorker.java	66	Local variable 't' could be declared final
7512	src/pipe/modules/dnamaca/SwingWorker.java	66	To be compliant to J2EE, a webapp should not use any thread.
7513	src/pipe/modules/dnamaca/SwingWorker.java	82	Avoid variables with short names like t
7514	src/pipe/modules/dnamaca/SwingWorker.java	82	Local variable 't' could be declared final
7515	src/pipe/modules/dnamaca/SwingWorker.java	84	A method should have only one exit point, and that should be the last statement in the method
7516	src/pipe/modules/dnamaca/SwingWorker.java	106	Local variable 'doConstruct' could be declared final
7517	src/pipe/modules/dnamaca/SwingWorker.java	119	Avoid variables with short names like t
7518	src/pipe/modules/dnamaca/SwingWorker.java	119	Local variable 't' could be declared final
7519	src/pipe/modules/dnamaca/SwingWorker.java	127	Local variable 't' could be declared final
7520	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	1	Package name contains upper case characters
7521	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	8	Avoid unused imports such as 'java.io.File'
7522	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	8	Avoid unused imports such as 'java.io.File'
7523	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	12	Avoid unused imports such as 'java.util.ArrayList'
7524	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	12	Avoid unused imports such as 'java.util.ArrayList'
7525	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	17	Avoid unused imports such as 'javax.swing.JButton'
7526	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	17	Avoid unused imports such as 'javax.swing.JButton'
7527	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	19	Avoid unused imports such as 'javax.swing.JTextField'
7528	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	19	Avoid unused imports such as 'javax.swing.JTextField'
7529	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	27	Avoid unused imports such as 'pipe.gui.widgets.GraphPanelPane'
7530	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	27	Avoid unused imports such as 'pipe.gui.widgets.GraphPanelPane'
7531	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	32	The class 'DnamacaTagged' has a Cyclomatic Complexity of 5 (Highest = 40).
7532	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	32	This class has too many methods, consider refactoring it.
7533	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	32	Too many fields
7534	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
7535	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
7536	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	36	It is somewhat confusing to have a field name with the same name as a method
7537	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
7538	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
7539	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
7540	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	39	Private field 'tagPlace' could be made final; it is only initialized in the declaration or constructor.
7541	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	41	This final field could be made static
7542	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	41	Use explicit scoping instead of the default package private level
7543	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	42	This final field could be made static
7544	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	42	Use explicit scoping instead of the default package private level
7545	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	43	This final field could be made static
7546	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	43	Use explicit scoping instead of the default package private level
7547	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	46	Avoid excessively long variable names like performanceDesc_original
7548	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	46	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
7549	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	47	Avoid excessively long variable names like performanceDesc_clone
7550	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	47	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
7551	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	48	Avoid excessively long variable names like doTokenDistributionForTagged
7552	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	51	Perhaps 'guiDialog' could be replaced by a local variable.
7553	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	60	Parameter '_pnmldata' is not assigned and could be declared final
7554	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	70	System.out.print is used
7555	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	76	Local variable 'contentPane' could be declared final
7556	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	82	Local variable 'buttonLabels' could be declared final
7557	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	83	Local variable 'buttonHandlers' could be declared final
7558	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	84	Avoid unused local variables such as 'buttons'.
7559	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	85	Found 'DU'-anomaly for variable 'buttons' (lines '84'-'91').
7560	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	95	Use explicit scoping instead of the default package private level
7561	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	96	Parameter 'arg0' is not assigned and could be declared final
7562	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	99	Avoid if (x != y) ..; else ..;
7563	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	100	Avoid using if...else statements without curly braces
7564	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	111	Local variable 'out1' could be declared final
7565	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	113	Local variable 'fstream' could be declared final
7566	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	125	System.out.print is used
7567	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	129	Avoid excessively long variable names like outputPerformanceResult
7568	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	129	Found 'DD'-anomaly for variable 'outputPerformanceResult' (lines '128'-'171').
7569	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	134	Avoid variables with short names like rt
7570	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	144	Avoid variables with short names like br
7571	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	145	Avoid unused local variables such as 'br2'.
7572	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	145	Found 'DU'-anomaly for variable 'br2' (lines '144'-'185').
7573	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	147	Found 'DD'-anomaly for variable 'line' (lines '146'-'150').
7574	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	151	Avoid assignments in operands
7575	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	151	Found 'DU'-anomaly for variable 'line' (lines '150'-'185').
7576	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	153	System.out.print is used
7577	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	154	Prefer StringBuffer over += for concatenating strings
7578	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	159	System.out.print is used
7579	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	160	A catch statement should never catch throwable since it includes errors.
7580	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	161	Avoid printStackTrace(); use a logger call instead.
7581	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	164	Avoid variables with short names like pe
7582	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	165	Avoid variables with short names like p
7583	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	171	Avoid using if statements without curly braces
7584	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	174	Avoid using if statements without curly braces
7585	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	174	Prefer StringBuffer over += for concatenating strings
7586	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	177	Prefer StringBuffer over += for concatenating strings
7587	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	181	Avoid using if...else statements without curly braces
7588	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	191	Use explicit scoping instead of the default package private level
7589	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	192	Parameter 'arg0' is not assigned and could be declared final
7590	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	194	Avoid unused local variables such as 'result'.
7591	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	194	Found 'DU'-anomaly for variable 'result' (lines '193'-'194').
7592	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	221	The String literal "}\n" appears 12 times in this file; the first occurrence is on line 220
7593	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	228	The String literal "}{\n" appears 5 times in this file; the first occurrence is on line 227
7594	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	231	The String literal "\t}\n" appears 5 times in this file; the first occurrence is on line 230
7595	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	252	Found 'DD'-anomaly for variable 'taggedArc' (lines '251'-'256').
7596	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	254	Avoid using while statements without curly braces
7597	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	257	Found 'DD'-anomaly for variable 'taggedArc' (lines '256'-'256').
7598	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	268	Avoid using if...else statements without curly braces
7599	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	274	Avoid variables with short names like i
7600	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	274	Parameter 'i' is not assigned and could be declared final
7601	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	274	Parameter 'type' is not assigned and could be declared final
7602	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	277	Avoid using if statements without curly braces
7603	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	277	Prefer StringBuffer over += for concatenating strings
7604	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	284	Avoid using if...else statements without curly braces
7605	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	287	Avoid using if...else statements without curly braces
7606	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	289	Avoid using if statements without curly braces
7607	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	333	Avoid using if statements without curly braces
7608	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	343	The String literal " = " appears 4 times in this file; the first occurrence is on line 342
7609	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	354	Found 'DD'-anomaly for variable 'taggedArc' (lines '353'-'364').
7610	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	355	Found 'DD'-anomaly for variable 'numInputArc' (lines '354'-'365').
7611	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	357	Avoid unused local variables such as 'arcsFrom'.
7612	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	357	Found 'DD'-anomaly for variable 'arcsFrom' (lines '356'-'356').
7613	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	357	Found 'DU'-anomaly for variable 'arcsFrom' (lines '356'-'381').
7614	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	365	Found 'DD'-anomaly for variable 'taggedArc' (lines '364'-'364').
7615	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	366	Found 'DD'-anomaly for variable 'numInputArc' (lines '365'-'365').
7616	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	386	Avoid really long methods.
7617	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	386	The method 'writeTransition' has a Cyclomatic Complexity of 40.
7618	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	386	The method writeTransition() has an NCSS line count of 141
7619	src/pipe/modules/dnamacaTagged/DnamacaTagged.java	386	The method writeTransition() has an NPath complexity of 391680
7620	src/pipe/modules/gspn/GSPN.java	31	The class 'GSPN' has a Cyclomatic Complexity of 4 (Highest = 12).
7621	src/pipe/modules/gspn/GSPN.java	31	This class has too many methods, consider refactoring it.
7622	src/pipe/modules/gspn/GSPN.java	42	Avoid unused private methods such as 'isEFCGSPN(DataLayer)'.
7623	src/pipe/modules/gspn/GSPN.java	42	Parameter 'pnmlData' is not assigned and could be declared final
7624	src/pipe/modules/gspn/GSPN.java	52	Avoid unused private methods such as 'getMarking(DataLayer)'.
7625	src/pipe/modules/gspn/GSPN.java	52	Parameter 'pnmlData' is not assigned and could be declared final
7626	src/pipe/modules/gspn/GSPN.java	54	Local variable 'places' could be declared final
7627	src/pipe/modules/gspn/GSPN.java	55	Found 'DD'-anomaly for variable 'marking' (lines '55'-'57').
7628	src/pipe/modules/gspn/GSPN.java	57	Found 'DD'-anomaly for variable 'marking' (lines '57'-'57').
7629	src/pipe/modules/gspn/GSPN.java	70	Parameter 'marking' is not assigned and could be declared final
7630	src/pipe/modules/gspn/GSPN.java	70	Parameter 'pnmlData' is not assigned and could be declared final
7631	src/pipe/modules/gspn/GSPN.java	70	Parameter 'transition' is not assigned and could be declared final
7632	src/pipe/modules/gspn/GSPN.java	72	Local variable 'transCount' could be declared final
7633	src/pipe/modules/gspn/GSPN.java	74	Found 'DD'-anomaly for variable 'result' (lines '74'-'80').
7634	src/pipe/modules/gspn/GSPN.java	74	Found 'DD'-anomaly for variable 'result' (lines '74'-'85').
7635	src/pipe/modules/gspn/GSPN.java	75	Avoid unused local variables such as 'answer'.
7636	src/pipe/modules/gspn/GSPN.java	75	Local variable 'answer' could be declared final
7637	src/pipe/modules/gspn/GSPN.java	76	Found 'DU'-anomaly for variable 'CMinus' (lines '76'-'90').
7638	src/pipe/modules/gspn/GSPN.java	76	Local variable 'CMinus' could be declared final
7639	src/pipe/modules/gspn/GSPN.java	77	Found 'DU'-anomaly for variable 'placeCount' (lines '77'-'90').
7640	src/pipe/modules/gspn/GSPN.java	77	Local variable 'placeCount' could be declared final
7641	src/pipe/modules/gspn/GSPN.java	80	Found 'DD'-anomaly for variable 'result' (lines '80'-'80').
7642	src/pipe/modules/gspn/GSPN.java	80	Found 'DD'-anomaly for variable 'result' (lines '80'-'85').
7643	src/pipe/modules/gspn/GSPN.java	84	Avoid using if statements without curly braces
7644	src/pipe/modules/gspn/GSPN.java	85	Found 'DD'-anomaly for variable 'result' (lines '85'-'85').
7645	src/pipe/modules/gspn/GSPN.java	107	Avoid unused local variables such as 'markSize'.
7646	src/pipe/modules/gspn/GSPN.java	107	Found 'DU'-anomaly for variable 'markSize' (lines '107'-'111').
7647	src/pipe/modules/gspn/GSPN.java	109	Avoid unused local variables such as 'reachSet'.
7648	src/pipe/modules/gspn/GSPN.java	109	Found 'DU'-anomaly for variable 'reachSet' (lines '109'-'111').
7649	src/pipe/modules/gspn/GSPN.java	124	Found 'DD'-anomaly for variable 'result' (lines '124'-'132').
7650	src/pipe/modules/gspn/GSPN.java	124	Found 'DD'-anomaly for variable 'result' (lines '124'-'137').
7651	src/pipe/modules/gspn/GSPN.java	125	Avoid unused local variables such as 'hasTimed'.
7652	src/pipe/modules/gspn/GSPN.java	125	Found 'DU'-anomaly for variable 'hasTimed' (lines '125'-'142').
7653	src/pipe/modules/gspn/GSPN.java	126	Avoid unused local variables such as 'hasImmediate'.
7654	src/pipe/modules/gspn/GSPN.java	126	Found 'DU'-anomaly for variable 'hasImmediate' (lines '126'-'142').
7655	src/pipe/modules/gspn/GSPN.java	127	Found 'DU'-anomaly for variable 'CMinus' (lines '127'-'142').
7656	src/pipe/modules/gspn/GSPN.java	128	Found 'DU'-anomaly for variable 'placeCount' (lines '128'-'142').
7657	src/pipe/modules/gspn/GSPN.java	129	Found 'DU'-anomaly for variable 'transArray' (lines '129'-'142').
7658	src/pipe/modules/gspn/GSPN.java	132	Found 'DD'-anomaly for variable 'result' (lines '132'-'132').
7659	src/pipe/modules/gspn/GSPN.java	132	Found 'DD'-anomaly for variable 'result' (lines '132'-'137').
7660	src/pipe/modules/gspn/GSPN.java	136	Avoid using if statements without curly braces
7661	src/pipe/modules/gspn/GSPN.java	137	Found 'DD'-anomaly for variable 'result' (lines '137'-'137').
7662	src/pipe/modules/gspn/GSPN.java	144	The method 'getTangibleTransitionEnabledStatusArray' has a Cyclomatic Complexity of 11.
7663	src/pipe/modules/gspn/GSPN.java	148	Found 'DD'-anomaly for variable 'result' (lines '148'-'156').
7664	src/pipe/modules/gspn/GSPN.java	148	Found 'DD'-anomaly for variable 'result' (lines '148'-'161').
7665	src/pipe/modules/gspn/GSPN.java	149	Found 'DD'-anomaly for variable 'hasTimed' (lines '149'-'166').
7666	src/pipe/modules/gspn/GSPN.java	150	Found 'DD'-anomaly for variable 'hasImmediate' (lines '150'-'169').
7667	src/pipe/modules/gspn/GSPN.java	151	Found 'DU'-anomaly for variable 'CMinus' (lines '151'-'181').
7668	src/pipe/modules/gspn/GSPN.java	152	Found 'DU'-anomaly for variable 'placeCount' (lines '152'-'181').
7669	src/pipe/modules/gspn/GSPN.java	153	Found 'DU'-anomaly for variable 'transArray' (lines '153'-'181').
7670	src/pipe/modules/gspn/GSPN.java	156	Found 'DD'-anomaly for variable 'result' (lines '156'-'156').
7671	src/pipe/modules/gspn/GSPN.java	156	Found 'DD'-anomaly for variable 'result' (lines '156'-'161').
7672	src/pipe/modules/gspn/GSPN.java	156	Found 'DD'-anomaly for variable 'result' (lines '156'-'175').
7673	src/pipe/modules/gspn/GSPN.java	160	Avoid using if statements without curly braces
7674	src/pipe/modules/gspn/GSPN.java	161	Found 'DD'-anomaly for variable 'result' (lines '161'-'161').
7675	src/pipe/modules/gspn/GSPN.java	161	Found 'DD'-anomaly for variable 'result' (lines '161'-'175').
7676	src/pipe/modules/gspn/GSPN.java	165	Avoid unnecessary comparisons in boolean expressions
7677	src/pipe/modules/gspn/GSPN.java	166	Found 'DD'-anomaly for variable 'hasTimed' (lines '166'-'166').
7678	src/pipe/modules/gspn/GSPN.java	169	Found 'DD'-anomaly for variable 'hasImmediate' (lines '169'-'169').
7679	src/pipe/modules/gspn/GSPN.java	174	Avoid unnecessary comparisons in boolean expressions
7680	src/pipe/modules/gspn/GSPN.java	175	Found 'DD'-anomaly for variable 'result' (lines '175'-'175').
7681	src/pipe/modules/gspn/GSPN.java	196	Found 'DD'-anomaly for variable 'hasTimed' (lines '196'-'203').
7682	src/pipe/modules/gspn/GSPN.java	197	Found 'DD'-anomaly for variable 'hasImmediate' (lines '197'-'206').
7683	src/pipe/modules/gspn/GSPN.java	199	Avoid unnecessary comparisons in boolean expressions
7684	src/pipe/modules/gspn/GSPN.java	200	Avoid unnecessary comparisons in boolean expressions
7685	src/pipe/modules/gspn/GSPN.java	203	Found 'DD'-anomaly for variable 'hasTimed' (lines '203'-'203').
7686	src/pipe/modules/gspn/GSPN.java	205	Avoid unnecessary comparisons in boolean expressions
7687	src/pipe/modules/gspn/GSPN.java	206	Found 'DD'-anomaly for variable 'hasImmediate' (lines '206'-'206').
7688	src/pipe/modules/gspn/GSPN.java	210	Avoid unnecessary if..then..else statements when returning a boolean
7689	src/pipe/modules/gspn/GSPN.java	211	A method should have only one exit point, and that should be the last statement in the method
7690	src/pipe/modules/gspn/GSPN.java	211	Avoid using if...else statements without curly braces
7691	src/pipe/modules/gspn/GSPN.java	213	Avoid using if...else statements without curly braces
7692	src/pipe/modules/gspn/GSPN.java	225	JUnit 4 tests that execute tests should use the @Test annotation
7693	src/pipe/modules/gspn/GSPN.java	227	Found 'DU'-anomaly for variable 'places' (lines '227'-'252').
7694	src/pipe/modules/gspn/GSPN.java	229	Found 'DU'-anomaly for variable 'arcsCount' (lines '229'-'252').
7695	src/pipe/modules/gspn/GSPN.java	234	Found 'DD'-anomaly for variable 'hasTimed' (lines '234'-'234').
7696	src/pipe/modules/gspn/GSPN.java	234	Found 'DD'-anomaly for variable 'hasTimed' (lines '234'-'242').
7697	src/pipe/modules/gspn/GSPN.java	234	Found 'DU'-anomaly for variable 'hasTimed' (lines '234'-'252').
7698	src/pipe/modules/gspn/GSPN.java	235	Found 'DD'-anomaly for variable 'hasUntimed' (lines '235'-'235').
7699	src/pipe/modules/gspn/GSPN.java	235	Found 'DD'-anomaly for variable 'hasUntimed' (lines '235'-'244').
7700	src/pipe/modules/gspn/GSPN.java	235	Found 'DU'-anomaly for variable 'hasUntimed' (lines '235'-'252').
7701	src/pipe/modules/gspn/GSPN.java	247	Avoid using if statements without curly braces
7702	src/pipe/modules/gspn/GSPN.java	248	A method should have only one exit point, and that should be the last statement in the method
7703	src/pipe/modules/gspn/GSPN.java	265	Found 'DU'-anomaly for variable 'transCount' (lines '265'-'279').
7704	src/pipe/modules/gspn/GSPN.java	266	Found 'DD'-anomaly for variable 'hasTimed' (lines '266'-'271').
7705	src/pipe/modules/gspn/GSPN.java	270	Avoid using if statements without curly braces
7706	src/pipe/modules/gspn/GSPN.java	271	Found 'DD'-anomaly for variable 'hasTimed' (lines '271'-'271').
7707	src/pipe/modules/gspn/GSPN.java	274	Avoid unnecessary if..then..else statements when returning a boolean
7708	src/pipe/modules/gspn/GSPN.java	275	A method should have only one exit point, and that should be the last statement in the method
7709	src/pipe/modules/gspn/GSPN.java	275	Avoid using if...else statements without curly braces
7710	src/pipe/modules/gspn/GSPN.java	277	Avoid using if...else statements without curly braces
7711	src/pipe/modules/gspn/GSPN.java	292	Found 'DU'-anomaly for variable 'transCount' (lines '292'-'306').
7712	src/pipe/modules/gspn/GSPN.java	293	Found 'DD'-anomaly for variable 'hasImmediate' (lines '293'-'298').
7713	src/pipe/modules/gspn/GSPN.java	298	Found 'DD'-anomaly for variable 'hasImmediate' (lines '298'-'298').
7714	src/pipe/modules/gspn/GSPN.java	301	Avoid unnecessary if..then..else statements when returning a boolean
7715	src/pipe/modules/gspn/GSPN.java	302	A method should have only one exit point, and that should be the last statement in the method
7716	src/pipe/modules/gspn/GSPN.java	302	Avoid using if...else statements without curly braces
7717	src/pipe/modules/gspn/GSPN.java	314	The method 'reduction' has a Cyclomatic Complexity of 12.
7718	src/pipe/modules/gspn/GSPN.java	317	Found 'DD'-anomaly for variable 'result' (lines '317'-'320').
7719	src/pipe/modules/gspn/GSPN.java	320	Found 'DD'-anomaly for variable 'result' (lines '320'-'320').
7720	src/pipe/modules/gspn/GSPN.java	320	Found 'DD'-anomaly for variable 'result' (lines '320'-'362').
7721	src/pipe/modules/gspn/GSPN.java	320	Found 'DU'-anomaly for variable 'result' (lines '320'-'365').
7722	src/pipe/modules/gspn/GSPN.java	331	Avoid variables with short names like k
7723	src/pipe/modules/gspn/GSPN.java	348	Found 'DD'-anomaly for variable 'reducedThisRow' (lines '348'-'352').
7724	src/pipe/modules/gspn/GSPN.java	352	Found 'DD'-anomaly for variable 'reducedThisRow' (lines '352'-'352').
7725	src/pipe/modules/gspn/GSPN.java	352	Found 'DU'-anomaly for variable 'reducedThisRow' (lines '352'-'365').
7726	src/pipe/modules/gspn/GSPN.java	358	Found 'DD'-anomaly for variable 'backSub' (lines '358'-'360').
7727	src/pipe/modules/gspn/GSPN.java	362	Found 'DD'-anomaly for variable 'result' (lines '362'-'362').
7728	src/pipe/modules/gspn/GSPN.java	394	Avoid variables with short names like r1
7729	src/pipe/modules/gspn/GSPN.java	395	Avoid variables with short names like r2
7730	src/pipe/modules/gspn/GSPN.java	406	System.out.print is used
7731	src/pipe/modules/gspn/GSPN.java	409	System.out.print is used
7732	src/pipe/modules/gspn/GSPN.java	411	System.out.print is used
7733	src/pipe/modules/gspn/GSPN.java	417	Avoid unused private methods such as 'printMatrix(int)'.
7734	src/pipe/modules/gspn/GSPN.java	420	System.out.print is used
7735	src/pipe/modules/gspn/GSPN.java	423	System.out.print is used
7736	src/pipe/modules/gspn/GSPN.java	431	Avoid unused private methods such as 'printMarking(int)'.
7737	src/pipe/modules/gspn/GSPN.java	442	A method should have only one exit point, and that should be the last statement in the method
7738	src/pipe/modules/gspn/GSPN.java	442	The String literal "n/a" appears 5 times in this file; the first occurrence is on line 442
7739	src/pipe/modules/gspn/GSPN.java	448	Found 'DU'-anomaly for variable 'places' (lines '448'-'461').
7740	src/pipe/modules/gspn/GSPN.java	456	Avoid using for statements without curly braces
7741	src/pipe/modules/gspn/GSPN.java	473	Found 'DU'-anomaly for variable 'places' (lines '473'-'486').
7742	src/pipe/modules/gspn/GSPN.java	481	Avoid using for statements without curly braces
7743	src/pipe/modules/gspn/GSPN.java	498	Avoid variables with short names like f
7744	src/pipe/modules/gspn/GSPN.java	500	Found 'DU'-anomaly for variable 'transitions' (lines '500'-'507').
7745	src/pipe/modules/gspn/GSPN.java	519	Avoid using for statements without curly braces
7746	src/pipe/modules/gspn/GSPN.java	521	Avoid variables with short names like f
7747	src/pipe/modules/gspn/GSPN.java	525	Avoid using for statements without curly braces
7748	src/pipe/modules/gspn/GSPNNew.java	40	The class 'GSPNNew' has a Cyclomatic Complexity of 3 (Highest = 10).
7749	src/pipe/modules/gspn/GSPNNew.java	40	This class has too many methods, consider refactoring it.
7750	src/pipe/modules/gspn/GSPNNew.java	45	Parameter 'pnmlData' is not assigned and could be declared final
7751	src/pipe/modules/gspn/GSPNNew.java	47	Local variable 'guiDialog' could be declared final
7752	src/pipe/modules/gspn/GSPNNew.java	50	Local variable 'contentPane' could be declared final
7753	src/pipe/modules/gspn/GSPNNew.java	74	Found non-transient, non-static member. Please mark as transient or provide accessors.
7754	src/pipe/modules/gspn/GSPNNew.java	74	Use explicit scoping instead of the default package private level
7755	src/pipe/modules/gspn/GSPNNew.java	75	Parameter 'arg0' is not assigned and could be declared final
7756	src/pipe/modules/gspn/GSPNNew.java	76	Found 'DU'-anomaly for variable 'start' (lines '76'-'141').
7757	src/pipe/modules/gspn/GSPNNew.java	76	Local variable 'start' could be declared final
7758	src/pipe/modules/gspn/GSPNNew.java	84	Local variable 'sourceDataLayer' could be declared final
7759	src/pipe/modules/gspn/GSPNNew.java	87	Found 'DU'-anomaly for variable 'reachabilityGraph' (lines '87'-'141').
7760	src/pipe/modules/gspn/GSPNNew.java	87	Local variable 'reachabilityGraph' could be declared final
7761	src/pipe/modules/gspn/GSPNNew.java	90	Avoid variables with short names like pi
7762	src/pipe/modules/gspn/GSPNNew.java	90	Found 'DD'-anomaly for variable 'pi' (lines '90'-'105').
7763	src/pipe/modules/gspn/GSPNNew.java	90	Found 'DU'-anomaly for variable 'pi' (lines '90'-'141').
7764	src/pipe/modules/gspn/GSPNNew.java	92	Avoid variables with short names like s
7765	src/pipe/modules/gspn/GSPNNew.java	92	Found 'DU'-anomaly for variable 's' (lines '92'-'141').
7766	src/pipe/modules/gspn/GSPNNew.java	94	A method should have only one exit point, and that should be the last statement in the method
7767	src/pipe/modules/gspn/GSPNNew.java	94	Avoid using if statements without curly braces
7768	src/pipe/modules/gspn/GSPNNew.java	96	Avoid if (x != y) ..; else ..;
7769	src/pipe/modules/gspn/GSPNNew.java	97	Prefer StringBuffer over += for concatenating strings
7770	src/pipe/modules/gspn/GSPNNew.java	103	Found 'DU'-anomaly for variable 'efinished' (lines '103'-'141').
7771	src/pipe/modules/gspn/GSPNNew.java	104	Do not explicitly trigger a garbage collection.
7772	src/pipe/modules/gspn/GSPNNew.java	105	Found 'DU'-anomaly for variable 'pi' (lines '105'-'141').
7773	src/pipe/modules/gspn/GSPNNew.java	106	Found 'DU'-anomaly for variable 'ssdfinished' (lines '106'-'141').
7774	src/pipe/modules/gspn/GSPNNew.java	107	Do not explicitly trigger a garbage collection.
7775	src/pipe/modules/gspn/GSPNNew.java	110	Prefer StringBuffer over += for concatenating strings
7776	src/pipe/modules/gspn/GSPNNew.java	112	A method should have only one exit point, and that should be the last statement in the method
7777	src/pipe/modules/gspn/GSPNNew.java	114	Prefer StringBuffer over += for concatenating strings
7778	src/pipe/modules/gspn/GSPNNew.java	116	A method should have only one exit point, and that should be the last statement in the method
7779	src/pipe/modules/gspn/GSPNNew.java	118	Prefer StringBuffer over += for concatenating strings
7780	src/pipe/modules/gspn/GSPNNew.java	118	The String literal "<br>" appears 7 times in this file; the first occurrence is on line 118
7781	src/pipe/modules/gspn/GSPNNew.java	120	A method should have only one exit point, and that should be the last statement in the method
7782	src/pipe/modules/gspn/GSPNNew.java	122	Prefer StringBuffer over += for concatenating strings
7783	src/pipe/modules/gspn/GSPNNew.java	133	Avoid variables with short names like f
7784	src/pipe/modules/gspn/GSPNNew.java	156	Avoid variables with short names like pi
7785	src/pipe/modules/gspn/GSPNNew.java	156	Parameter 'pi' is not assigned and could be declared final
7786	src/pipe/modules/gspn/GSPNNew.java	156	Parameter 'rgfile' is not assigned and could be declared final
7787	src/pipe/modules/gspn/GSPNNew.java	156	Parameter 'sourceDataLayer' is not assigned and could be declared final
7788	src/pipe/modules/gspn/GSPNNew.java	158	Found 'DD'-anomaly for variable 'tangiblestates' (lines '158'-'169').
7789	src/pipe/modules/gspn/GSPNNew.java	159	Avoid instantiating String objects; this is usually unnecessary.
7790	src/pipe/modules/gspn/GSPNNew.java	159	Avoid variables with short names like s
7791	src/pipe/modules/gspn/GSPNNew.java	162	Avoid using final local variables, turn them into fields
7792	src/pipe/modules/gspn/GSPNNew.java	163	Avoid using final local variables, turn them into fields
7793	src/pipe/modules/gspn/GSPNNew.java	163	Found 'DU'-anomaly for variable 'SUMMARYMODE' (lines '163'-'199').
7794	src/pipe/modules/gspn/GSPNNew.java	164	Avoid excessively long variable names like MAXSTATESTODISPLAY
7795	src/pipe/modules/gspn/GSPNNew.java	164	Avoid using final local variables, turn them into fields
7796	src/pipe/modules/gspn/GSPNNew.java	164	Found 'DU'-anomaly for variable 'MAXSTATESTODISPLAY' (lines '164'-'199').
7797	src/pipe/modules/gspn/GSPNNew.java	165	Found 'DU'-anomaly for variable 'mode' (lines '165'-'199').
7798	src/pipe/modules/gspn/GSPNNew.java	169	Found 'DU'-anomaly for variable 'tangiblestates' (lines '169'-'199').
7799	src/pipe/modules/gspn/GSPNNew.java	172	A method should have only one exit point, and that should be the last statement in the method
7800	src/pipe/modules/gspn/GSPNNew.java	178	Avoid using if statements without curly braces
7801	src/pipe/modules/gspn/GSPNNew.java	244	Found 'DD'-anomaly for variable 'averages' (lines '244'-'250').
7802	src/pipe/modules/gspn/GSPNNew.java	250	Found 'DD'-anomaly for variable 'averages' (lines '250'-'250').
7803	src/pipe/modules/gspn/GSPNNew.java	254	System.out.print is used
7804	src/pipe/modules/gspn/GSPNNew.java	259	System.out.print is used
7805	src/pipe/modules/gspn/GSPNNew.java	261	System.out.print is used
7806	src/pipe/modules/gspn/GSPNNew.java	290	The method 'tokenDistribution' has a Cyclomatic Complexity of 10.
7807	src/pipe/modules/gspn/GSPNNew.java	293	Avoid excessively long variable names like highestnumberoftokens
7808	src/pipe/modules/gspn/GSPNNew.java	312	Avoid instantiating new objects inside loops
7809	src/pipe/modules/gspn/GSPNNew.java	315	System.out.print is used
7810	src/pipe/modules/gspn/GSPNNew.java	323	Found 'DU'-anomaly for variable 'current' (lines '323'-'361').
7811	src/pipe/modules/gspn/GSPNNew.java	325	Avoid using if statements without curly braces
7812	src/pipe/modules/gspn/GSPNNew.java	328	Avoid instantiating new objects inside loops
7813	src/pipe/modules/gspn/GSPNNew.java	347	System.out.print is used
7814	src/pipe/modules/gspn/GSPNNew.java	356	Found 'DD'-anomaly for variable 'result' (lines '356'-'356').
7815	src/pipe/modules/gspn/GSPNNew.java	382	Avoid using if statements without curly braces
7816	src/pipe/modules/gspn/GSPNNew.java	388	Avoid using for statements without curly braces
7817	src/pipe/modules/gspn/GSPNNew.java	394	Avoid using for statements without curly braces
7818	src/pipe/modules/gspn/GSPNNew.java	412	Avoid excessively long variable names like specifiedTransitionRate
7819	src/pipe/modules/gspn/GSPNNew.java	412	Found 'DD'-anomaly for variable 'specifiedTransitionRate' (lines '412'-'412').
7820	src/pipe/modules/gspn/GSPNNew.java	412	Found 'DD'-anomaly for variable 'specifiedTransitionRate' (lines '412'-'416').
7821	src/pipe/modules/gspn/GSPNNew.java	412	Found 'DU'-anomaly for variable 'specifiedTransitionRate' (lines '412'-'424').
7822	src/pipe/modules/gspn/GSPNNew.java	413	Found 'DD'-anomaly for variable 'transStatus' (lines '413'-'413').
7823	src/pipe/modules/gspn/GSPNNew.java	413	Found 'DU'-anomaly for variable 'transStatus' (lines '413'-'424').
7824	src/pipe/modules/gspn/GSPNNew.java	415	Avoid unnecessary comparisons in boolean expressions
7825	src/pipe/modules/gspn/GSPNNew.java	428	Avoid using if statements without curly braces
7826	src/pipe/modules/gspn/GSPNNew.java	437	Avoid unnecessary comparisons in boolean expressions
7827	src/pipe/modules/iai/ExponentialDistribution.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
7828	src/pipe/modules/iai/ExponentialDistribution.java	16	Private field 'mean' could be made final; it is only initialized in the declaration or constructor.
7829	src/pipe/modules/iai/ExponentialDistribution.java	18	Parameter 'rate' is not assigned and could be declared final
7830	src/pipe/modules/iai/ExponentialDistribution.java	23	Parameter 'rval' is not assigned and could be declared final
7831	src/pipe/modules/iai/QueueRecord.java	10	Each class should declare at least one constructor
7832	src/pipe/modules/iai/SimulationClockWatcher.java	24	Avoid unnecessary constructors - the compiler will generate these for you
7833	src/pipe/modules/iai/SimulationClockWatcher.java	29	Parameter 'pnmlData' is not assigned and could be declared final
7834	src/pipe/modules/iai/SimulationClockWatcherDialog.java	18	Avoid unused constructor parameters such as '_moduleName'.
7835	src/pipe/modules/iai/SimulationClockWatcherDialog.java	18	Avoid unused constructor parameters such as '_parent'.
7836	src/pipe/modules/iai/SimulationClockWatcherDialog.java	18	Parameter '_moduleName' is not assigned and could be declared final
7837	src/pipe/modules/iai/SimulationClockWatcherDialog.java	19	Parameter '_parent' is not assigned and could be declared final
7838	src/pipe/modules/iai/SimulationFiringCounter.java	23	Avoid unused private fields such as 'MODULE_NAME'.
7839	src/pipe/modules/iai/SimulationFiringCounter.java	26	Avoid unnecessary constructors - the compiler will generate these for you
7840	src/pipe/modules/iai/SimulationFiringCounter.java	30	Parameter 'pnmlData' is not assigned and could be declared final
7841	src/pipe/modules/iai/SimulationFiringCounterDialog.java	18	Avoid unused constructor parameters such as '_moduleName'.
7842	src/pipe/modules/iai/SimulationFiringCounterDialog.java	18	Avoid unused constructor parameters such as '_parent'.
7843	src/pipe/modules/iai/SimulationFiringCounterDialog.java	18	Parameter '_moduleName' is not assigned and could be declared final
7844	src/pipe/modules/iai/SimulationFiringCounterDialog.java	19	Parameter '_parent' is not assigned and could be declared final
7845	src/pipe/modules/iai/SimulationPlaceWatcher.java	27	Avoid unnecessary constructors - the compiler will generate these for you
7846	src/pipe/modules/iai/SimulationPlaceWatcher.java	32	Parameter 'pnmlData' is not assigned and could be declared final
7847	src/pipe/modules/iai/SimulationPlaceWatcherDialog.java	18	Avoid unused constructor parameters such as '_moduleName'.
7848	src/pipe/modules/iai/SimulationPlaceWatcherDialog.java	18	Avoid unused constructor parameters such as '_parent'.
7849	src/pipe/modules/iai/SimulationPlaceWatcherDialog.java	18	Parameter '_moduleName' is not assigned and could be declared final
7850	src/pipe/modules/iai/SimulationPlaceWatcherDialog.java	19	Parameter '_parent' is not assigned and could be declared final
7851	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	8	Package name contains upper case characters
7852	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	27	The class 'InvariantAnalysis' has a Cyclomatic Complexity of 4 (Highest = 23).
7853	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	27	This class has too many methods, consider refactoring it.
7854	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
7855	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
7856	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	36	Variables should start with a lowercase character
7857	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
7858	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	37	Variables should start with a lowercase character
7859	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
7860	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	38	Perhaps 'TInvariants' could be replaced by a local variable.
7861	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	38	Variables should start with a lowercase character
7862	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
7863	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	44	Avoid unnecessary constructors - the compiler will generate these for you
7864	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	44	Document empty constructor
7865	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	57	Parameter 'pnmlData' is not assigned and could be declared final
7866	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	62	Local variable 'guiDialog' could be declared final
7867	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	65	Local variable 'contentPane' could be declared final
7868	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	90	Avoid excessively long variable names like analyseButtonClick
7869	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	90	Use explicit scoping instead of the default package private level
7870	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	91	Parameter 'arg0' is not assigned and could be declared final
7871	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	92	Local variable 'sourceDataLayer' could be declared final
7872	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	93	Avoid variables with short names like s
7873	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	93	Found 'DU'-anomaly for variable 's' (lines '93'-'98').
7874	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	94	Avoid using if statements without curly braces
7875	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	95	Avoid if (x != y) ..; else ..;
7876	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	95	Avoid using if...else statements without curly braces
7877	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	95	Prefer StringBuffer over += for concatenating strings
7878	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	96	Avoid using if...else statements without curly braces
7879	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	96	Prefer StringBuffer over += for concatenating strings
7880	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	111	Parameter 'pnmlData' is not assigned and could be declared final
7881	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	112	Found 'DU'-anomaly for variable 'start_time' (lines '112'-'125').
7882	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	112	Local variable 'start_time' could be declared final
7883	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	114	Local variable 'array' could be declared final
7884	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	115	A method should have only one exit point, and that should be the last statement in the method
7885	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	115	Avoid using if statements without curly braces
7886	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	134	Avoid variables with short names like M
7887	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	134	Parameter 'M' is not assigned and could be declared final
7888	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	144	Avoid variables with short names like M
7889	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	144	Parameter 'M' is not assigned and could be declared final
7890	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	148	Avoid using if...else statements without curly braces
7891	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	148	Prefer StringBuffer over += for concatenating strings
7892	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	149	Avoid using if...else statements without curly braces
7893	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	149	Prefer StringBuffer over += for concatenating strings
7894	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	162	Avoid variables with short names like M
7895	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	166	Avoid using if...else statements without curly braces
7896	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	166	Prefer StringBuffer over += for concatenating strings
7897	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	180	Found 'DU'-anomaly for variable 'placeArray' (lines '180'-'214').
7898	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	181	Avoid variables with short names like eq
7899	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	181	Found 'DD'-anomaly for variable 'eq' (lines '181'-'206').
7900	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	181	Found 'DU'-anomaly for variable 'eq' (lines '181'-'214').
7901	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	182	Found 'DU'-anomaly for variable 'm' (lines '182'-'214').
7902	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	183	Avoid using if statements without curly braces
7903	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	184	A method should have only one exit point, and that should be the last statement in the method
7904	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	186	Found 'DD'-anomaly for variable 'col' (lines '186'-'209').
7905	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	186	Found 'DU'-anomaly for variable 'col' (lines '186'-'214').
7906	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	187	Found 'DD'-anomaly for variable 'rhs' (lines '187'-'210').
7907	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	187	Found 'DU'-anomaly for variable 'rhs' (lines '187'-'214').
7908	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	190	Found 'DU'-anomaly for variable 'M' (lines '190'-'214').
7909	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	198	Avoid using if statements without curly braces
7910	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	Avoid really long methods.
7911	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	Avoid reassigning parameters such as 'C'
7912	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	Avoid reassigning parameters such as 'C'
7913	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	Avoid reassigning parameters such as 'C'
7914	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	The method 'findVectors' has a Cyclomatic Complexity of 23.
7915	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	222	The method findVectors() has an NPath complexity of 510
7916	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	237	Found 'DD'-anomaly for variable 'B' (lines '237'-'260').
7917	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	261	Found 'DD'-anomaly for variable 'n' (lines '261'-'261').
7918	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	261	Found 'DD'-anomaly for variable 'n' (lines '261'-'394').
7919	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	277	Avoid using if statements without curly braces
7920	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	277	System.out.print is used
7921	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	284	Avoid instantiating new objects inside loops
7922	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	309	Avoid assignments in operands
7923	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	318	Avoid instantiating new objects inside loops
7924	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	355	Avoid assignments in operands
7925	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	355	Found 'DU'-anomaly for variable 'h' (lines '355'-'429').
7926	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	361	Found 'DU'-anomaly for variable 'pMinusLength' (lines '361'-'429').
7927	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	378	Avoid instantiating new objects inside loops
7928	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	378	Found 'DD'-anomaly for variable 'V1' (lines '378'-'380').
7929	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	379	Avoid instantiating new objects inside loops
7930	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	379	Found 'DD'-anomaly for variable 'V2' (lines '379'-'381').
7931	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	395	Avoid instantiating new objects inside loops
7932	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	395	Found 'DD'-anomaly for variable 'F' (lines '395'-'396').
7933	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	397	Found 'DD'-anomaly for variable 'B' (lines '397'-'403').
7934	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	402	Avoid using for statements without curly braces
7935	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	414	Found 'DU'-anomaly for variable 'Bi' (lines '414'-'429').
7936	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	421	Found 'DU'-anomaly for variable 'Bi' (lines '421'-'429').
7937	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	437	Found 'DD'-anomaly for variable 'effectiveLength' (lines '437'-'442').
7938	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	441	Avoid if (x != y) ..; else ..;
7939	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	442	Found 'DD'-anomaly for variable 'effectiveLength' (lines '442'-'442').
7940	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	443	A method should have only one exit point, and that should be the last statement in the method
7941	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	459	Found 'DD'-anomaly for variable 'alpha' (lines '459'-'463').
7942	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	459	Found 'DD'-anomaly for variable 'alpha' (lines '459'-'465').
7943	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	463	Found 'DD'-anomaly for variable 'alpha' (lines '463'-'463').
7944	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	463	Found 'DD'-anomaly for variable 'alpha' (lines '463'-'465').
7945	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	465	Found 'DD'-anomaly for variable 'alpha' (lines '465'-'463').
7946	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	465	Found 'DD'-anomaly for variable 'alpha' (lines '465'-'465').
7947	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	481	Found 'DD'-anomaly for variable 'beta' (lines '481'-'484').
7948	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	482	Found 'DU'-anomaly for variable 'abschk' (lines '482'-'487').
7949	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	483	Avoid using for statements without curly braces
7950	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	484	Found 'DD'-anomaly for variable 'beta' (lines '484'-'484').
7951	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	490	Avoid using for statements without curly braces
7952	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	505	Found 'DD'-anomaly for variable 'union' (lines '505'-'508').
7953	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	505	Found 'DD'-anomaly for variable 'union' (lines '505'-'510').
7954	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	521	Found 'DD'-anomaly for variable 'isEmpty' (lines '521'-'526').
7955	src/pipe/modules/invariantAnalysis/InvariantAnalysis.java	527	A method should have only one exit point, and that should be the last statement in the method
7956	src/pipe/modules/matrices/Matrices.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
7957	src/pipe/modules/matrices/Matrices.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
7958	src/pipe/modules/matrices/Matrices.java	32	Parameter 'pnmlData' is not assigned and could be declared final
7959	src/pipe/modules/matrices/Matrices.java	34	Local variable 'guiDialog' could be declared final
7960	src/pipe/modules/matrices/Matrices.java	37	Local variable 'contentPane' could be declared final
7961	src/pipe/modules/matrices/Matrices.java	65	Avoid excessively long variable names like calculateButtonClick
7962	src/pipe/modules/matrices/Matrices.java	65	Found non-transient, non-static member. Please mark as transient or provide accessors.
7963	src/pipe/modules/matrices/Matrices.java	65	Use explicit scoping instead of the default package private level
7964	src/pipe/modules/matrices/Matrices.java	66	Parameter 'arg0' is not assigned and could be declared final
7965	src/pipe/modules/matrices/Matrices.java	67	Local variable 'data' could be declared final
7966	src/pipe/modules/matrices/Matrices.java	68	Avoid variables with short names like s
7967	src/pipe/modules/matrices/Matrices.java	68	Found 'DU'-anomaly for variable 's' (lines '68'-'94').
7968	src/pipe/modules/matrices/Matrices.java	69	Avoid using if statements without curly braces
7969	src/pipe/modules/matrices/Matrices.java	70	Avoid if (x != y) ..; else ..;
7970	src/pipe/modules/matrices/Matrices.java	70	Avoid using if...else statements without curly braces
7971	src/pipe/modules/matrices/Matrices.java	70	Prefer StringBuffer over += for concatenating strings
7972	src/pipe/modules/matrices/Matrices.java	72	Prefer StringBuffer over += for concatenating strings
7973	src/pipe/modules/matrices/Matrices.java	76	Prefer StringBuffer over += for concatenating strings
7974	src/pipe/modules/matrices/Matrices.java	80	Prefer StringBuffer over += for concatenating strings
7975	src/pipe/modules/matrices/Matrices.java	84	Prefer StringBuffer over += for concatenating strings
7976	src/pipe/modules/matrices/Matrices.java	98	Parameter 'data' is not assigned and could be declared final
7977	src/pipe/modules/matrices/Matrices.java	98	Parameter 'matrix' is not assigned and could be declared final
7978	src/pipe/modules/matrices/Matrices.java	99	A method should have only one exit point, and that should be the last statement in the method
7979	src/pipe/modules/matrices/Matrices.java	99	Avoid using if statements without curly braces
7980	src/pipe/modules/matrices/Matrices.java	101	Local variable 'result' could be declared final
7981	src/pipe/modules/matrices/Matrices.java	104	Avoid using for statements without curly braces
7982	src/pipe/modules/matrices/Matrices.java	108	Avoid using for statements without curly braces
7983	src/pipe/modules/matrices/Matrices.java	115	Parameter 'data' is not assigned and could be declared final
7984	src/pipe/modules/matrices/Matrices.java	116	Local variable 'places' could be declared final
7985	src/pipe/modules/matrices/Matrices.java	117	A method should have only one exit point, and that should be the last statement in the method
7986	src/pipe/modules/matrices/Matrices.java	117	Avoid using if statements without curly braces
7987	src/pipe/modules/matrices/Matrices.java	125	Avoid using for statements without curly braces
7988	src/pipe/modules/matrices/Matrices.java	128	Avoid using for statements without curly braces
7989	src/pipe/modules/matrices/Matrices.java	130	Avoid using for statements without curly braces
7990	src/pipe/modules/matrices/Matrices.java	137	A method should have only one exit point, and that should be the last statement in the method
7991	src/pipe/modules/matrices/Matrices.java	137	Avoid using if statements without curly braces
7992	src/pipe/modules/passage/Analyse.java	28	To be compliant to J2EE, a webapp should not use any thread.
7993	src/pipe/modules/passage/Analyse.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
7994	src/pipe/modules/passage/Analyse.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
7995	src/pipe/modules/passage/Analyse.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
7996	src/pipe/modules/passage/Analyse.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
7997	src/pipe/modules/passage/Analyse.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
7998	src/pipe/modules/passage/Analyse.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
7999	src/pipe/modules/passage/Analyse.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
8000	src/pipe/modules/passage/Analyse.java	35	Private field 'pnmlData' could be made final; it is only initialized in the declaration or constructor.
8001	src/pipe/modules/passage/Analyse.java	36	Use explicit scoping instead of the default package private level
8002	src/pipe/modules/passage/Analyse.java	37	Private field 'progressPane' could be made final; it is only initialized in the declaration or constructor.
8003	src/pipe/modules/passage/Analyse.java	38	Private field 'resultsPanel' could be made final; it is only initialized in the declaration or constructor.
8004	src/pipe/modules/passage/Analyse.java	42	Use explicit scoping instead of the default package private level
8005	src/pipe/modules/passage/Analyse.java	46	Parameter 'pnmlData' is not assigned and could be declared final
8006	src/pipe/modules/passage/Analyse.java	46	Parameter 'progressPane' is not assigned and could be declared final
8007	src/pipe/modules/passage/Analyse.java	46	Parameter 'resultsPanel' is not assigned and could be declared final
8008	src/pipe/modules/passage/Analyse.java	53	Parameter 'serverAddr' is not assigned and could be declared final
8009	src/pipe/modules/passage/Analyse.java	53	Parameter 'serverPort' is not assigned and could be declared final
8010	src/pipe/modules/passage/Analyse.java	59	Avoid using implementation types like 'ArrayList'; use the interface instead
8011	src/pipe/modules/passage/Analyse.java	59	Avoid using implementation types like 'ArrayList'; use the interface instead
8012	src/pipe/modules/passage/Analyse.java	59	Avoid using implementation types like 'ArrayList'; use the interface instead
8013	src/pipe/modules/passage/Analyse.java	59	Avoid using implementation types like 'ArrayList'; use the interface instead
8014	src/pipe/modules/passage/Analyse.java	71	Local variable 'splaces' could be declared final
8015	src/pipe/modules/passage/Analyse.java	72	Local variable 'sTransitions' could be declared final
8016	src/pipe/modules/passage/Analyse.java	78	Local variable 'serverSock' could be declared final
8017	src/pipe/modules/passage/Analyse.java	92	Local variable 'serverListener' could be declared final
8018	src/pipe/modules/passage/Analyse.java	98	Local variable 'resultsReceiver' could be declared final
8019	src/pipe/modules/passage/ConditionPlace.java	29	Variables that are final and static should be in all caps.
8020	src/pipe/modules/passage/ConditionPlace.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8021	src/pipe/modules/passage/ConditionPlace.java	36	Private field 'currentMarking' could be made final; it is only initialized in the declaration or constructor.
8022	src/pipe/modules/passage/ConditionPlace.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
8023	src/pipe/modules/passage/ConditionPlace.java	39	Private field 'defaultColor' could be made final; it is only initialized in the declaration or constructor.
8024	src/pipe/modules/passage/ConditionPlace.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8025	src/pipe/modules/passage/ConditionPlace.java	40	Private field 'validColor' could be made final; it is only initialized in the declaration or constructor.
8026	src/pipe/modules/passage/ConditionPlace.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8027	src/pipe/modules/passage/ConditionPlace.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8028	src/pipe/modules/passage/ConditionPlace.java	49	Parameter 'inputPlace' is not assigned and could be declared final
8029	src/pipe/modules/passage/ConditionPlace.java	53	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
8030	src/pipe/modules/passage/ConditionPlace.java	66	Avoid variables with short names like g
8031	src/pipe/modules/passage/ConditionPlace.java	66	Parameter 'g' is not assigned and could be declared final
8032	src/pipe/modules/passage/ConditionPlace.java	69	Avoid variables with short names like g2
8033	src/pipe/modules/passage/ConditionPlace.java	69	Local variable 'g2' could be declared final
8034	src/pipe/modules/passage/ConditionPlace.java	70	Local variable 'saveXform' could be declared final
8035	src/pipe/modules/passage/ConditionPlace.java	71	Local variable 'scaledXform' could be declared final
8036	src/pipe/modules/passage/ConditionPlace.java	72	Local variable 'insets' could be declared final
8037	src/pipe/modules/passage/ConditionPlace.java	73	Avoid variables with short names like x
8038	src/pipe/modules/passage/ConditionPlace.java	73	Local variable 'x' could be declared final
8039	src/pipe/modules/passage/ConditionPlace.java	74	Avoid variables with short names like y
8040	src/pipe/modules/passage/ConditionPlace.java	86	Avoid using if...else statements without curly braces
8041	src/pipe/modules/passage/ConditionPlace.java	88	Avoid using if...else statements without curly braces
8042	src/pipe/modules/passage/ConditionPlace.java	107	A method should have only one exit point, and that should be the last statement in the method
8043	src/pipe/modules/passage/ConditionPlace.java	107	Avoid using if...else statements without curly braces
8044	src/pipe/modules/passage/ConditionPlace.java	109	Avoid using if...else statements without curly braces
8045	src/pipe/modules/passage/ConditionPlace.java	139	Avoid variables with short names like x
8046	src/pipe/modules/passage/ConditionPlace.java	139	Parameter 'x' is not assigned and could be declared final
8047	src/pipe/modules/passage/ConditionPlace.java	139	Parameter 'y' is not assigned and could be declared final
8048	src/pipe/modules/passage/ConditionPlace.java	149	Overriding method merely calls super
8049	src/pipe/modules/passage/ConditionPlace.java	149	clone() method should throw CloneNotSupportedException
8050	src/pipe/modules/passage/ConditionPlace.java	153	Avoid reassigning parameters such as 'operator'
8051	src/pipe/modules/passage/ConditionPlace.java	153	Avoid reassigning parameters such as 'operator'
8052	src/pipe/modules/passage/ConditionPlace.java	153	Parameter 'operand' is not assigned and could be declared final
8053	src/pipe/modules/passage/ConditionPlace.java	156	Position literals first in String comparisons
8054	src/pipe/modules/passage/ConditionPlace.java	157	Avoid using if...else statements without curly braces
8055	src/pipe/modules/passage/ConditionPlace.java	158	Avoid using if statements without curly braces
8056	src/pipe/modules/passage/ConditionPlace.java	158	Position literals first in String comparisons
8057	src/pipe/modules/passage/ConditionPlace.java	178	Document empty method
8058	src/pipe/modules/passage/ConditionPlaceHandler.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
8059	src/pipe/modules/passage/ConditionPlaceHandler.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
8060	src/pipe/modules/passage/ConditionPlaceHandler.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8061	src/pipe/modules/passage/ConditionPlaceHandler.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8062	src/pipe/modules/passage/ConditionPlaceHandler.java	36	Use explicit scoping instead of the default package private level
8063	src/pipe/modules/passage/ConditionPlaceHandler.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
8064	src/pipe/modules/passage/ConditionPlaceHandler.java	37	Use explicit scoping instead of the default package private level
8065	src/pipe/modules/passage/ConditionPlaceHandler.java	38	Use explicit scoping instead of the default package private level
8066	src/pipe/modules/passage/ConditionPlaceHandler.java	40	It is a good practice to call super() in a constructor
8067	src/pipe/modules/passage/ConditionPlaceHandler.java	40	Parameter 'parentDialog' is not assigned and could be declared final
8068	src/pipe/modules/passage/ConditionPlaceHandler.java	40	Parameter 'place' is not assigned and could be declared final
8069	src/pipe/modules/passage/ConditionPlaceHandler.java	54	Local variable 'contentPane' could be declared final
8070	src/pipe/modules/passage/ConditionPlaceHandler.java	60	Local variable 'mainPanel' could be declared final
8071	src/pipe/modules/passage/ConditionPlaceHandler.java	80	Local variable 'buttonPanel' could be declared final
8072	src/pipe/modules/passage/ConditionPlaceHandler.java	117	Use explicit scoping instead of the default package private level
8073	src/pipe/modules/passage/ConditionPlaceHandler.java	117	Variables should start with a lowercase character
8074	src/pipe/modules/passage/ConditionPlaceHandler.java	119	Parameter 'event' is not assigned and could be declared final
8075	src/pipe/modules/passage/ConditionPlaceHandler.java	130	Found 'DU'-anomaly for variable 'operatorStr' (lines '130'-'158').
8076	src/pipe/modules/passage/ConditionPlaceHandler.java	149	System.out.print is used
8077	src/pipe/modules/passage/ConditionPlaceHandler.java	167	Avoid variables with short names like e
8078	src/pipe/modules/passage/ConditionPlaceHandler.java	167	Parameter 'e' is not assigned and could be declared final
8079	src/pipe/modules/passage/ConditionPlaceHandler.java	171	Avoid using if...else statements without curly braces
8080	src/pipe/modules/passage/ConditionPlaceHandler.java	175	Local variable 'popup' could be declared final
8081	src/pipe/modules/passage/ConditionPlaceHandler.java	181	Parameter 'inputString' is not assigned and could be declared final
8082	src/pipe/modules/passage/ConditionPlaceHandler.java	185	Local variable 'checkInput' could be declared final
8083	src/pipe/modules/passage/ConditionPlaceHandler.java	186	Avoid unnecessary if..then..else statements when returning a boolean
8084	src/pipe/modules/passage/ConditionPlaceHandler.java	187	A method should have only one exit point, and that should be the last statement in the method
8085	src/pipe/modules/passage/ConditionPlaceHandler.java	187	Avoid using if...else statements without curly braces
8086	src/pipe/modules/passage/ConditionPlaceHandler.java	189	A method should have only one exit point, and that should be the last statement in the method
8087	src/pipe/modules/passage/ConditionPlaceHandler.java	189	Avoid using if...else statements without curly braces
8088	src/pipe/modules/passage/ConditionPlaceHandler.java	200	Avoid variables with short names like e
8089	src/pipe/modules/passage/ConditionPlaceHandler.java	208	Avoid variables with short names like e
8090	src/pipe/modules/passage/Passage.java	1	A high number of imports can indicate a high degree of coupling within an object.
8091	src/pipe/modules/passage/Passage.java	47	The class 'Passage' has a Cyclomatic Complexity of 4 (Highest = 13).
8092	src/pipe/modules/passage/Passage.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
8093	src/pipe/modules/passage/Passage.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
8094	src/pipe/modules/passage/Passage.java	56	Avoid unnecessary constructors - the compiler will generate these for you
8095	src/pipe/modules/passage/Passage.java	56	Document empty constructor
8096	src/pipe/modules/passage/Passage.java	67	Found non-transient, non-static member. Please mark as transient or provide accessors.
8097	src/pipe/modules/passage/Passage.java	67	Perhaps 'guiDialog' could be replaced by a local variable.
8098	src/pipe/modules/passage/Passage.java	68	Found non-transient, non-static member. Please mark as transient or provide accessors.
8099	src/pipe/modules/passage/Passage.java	70	Found non-transient, non-static member. Please mark as transient or provide accessors.
8100	src/pipe/modules/passage/Passage.java	77	Use explicit scoping instead of the default package private level
8101	src/pipe/modules/passage/Passage.java	78	Use explicit scoping instead of the default package private level
8102	src/pipe/modules/passage/Passage.java	79	Use explicit scoping instead of the default package private level
8103	src/pipe/modules/passage/Passage.java	82	Use explicit scoping instead of the default package private level
8104	src/pipe/modules/passage/Passage.java	83	Use explicit scoping instead of the default package private level
8105	src/pipe/modules/passage/Passage.java	86	Parameter 'pnmlDataIn' is not assigned and could be declared final
8106	src/pipe/modules/passage/Passage.java	97	Local variable 'contentPane' could be declared final
8107	src/pipe/modules/passage/Passage.java	101	Local variable 'setupPanel' could be declared final
8108	src/pipe/modules/passage/Passage.java	141	Avoid variables with short names like e
8109	src/pipe/modules/passage/Passage.java	141	Parameter 'e' is not assigned and could be declared final
8110	src/pipe/modules/passage/Passage.java	142	Local variable 'source' could be declared final
8111	src/pipe/modules/passage/Passage.java	144	Use equals() to compare object references.
8112	src/pipe/modules/passage/Passage.java	158	Avoid excessively long variable names like analyseButtonClick
8113	src/pipe/modules/passage/Passage.java	159	Parameter 'arg0' is not assigned and could be declared final
8114	src/pipe/modules/passage/Passage.java	159	The method 'actionPerformed' has a Cyclomatic Complexity of 10.
8115	src/pipe/modules/passage/Passage.java	162	Found 'DU'-anomaly for variable 'selectedServer' (lines '162'-'223').
8116	src/pipe/modules/passage/Passage.java	162	Local variable 'selectedServer' could be declared final
8117	src/pipe/modules/passage/Passage.java	165	Found 'DU'-anomaly for variable 'sourceStateGroups' (lines '165'-'223').
8118	src/pipe/modules/passage/Passage.java	165	Local variable 'sourceStateGroups' could be declared final
8119	src/pipe/modules/passage/Passage.java	166	Avoid excessively long variable names like destinationStateGroups
8120	src/pipe/modules/passage/Passage.java	166	Found 'DU'-anomaly for variable 'destinationStateGroups' (lines '166'-'223').
8121	src/pipe/modules/passage/Passage.java	168	Found 'DU'-anomaly for variable 'analysisSetting' (lines '168'-'223').
8122	src/pipe/modules/passage/Passage.java	178	Avoid using if statements without curly braces
8123	src/pipe/modules/passage/Passage.java	185	Found 'DU'-anomaly for variable 'statusMesg' (lines '185'-'223').
8124	src/pipe/modules/passage/Passage.java	188	A method should have only one exit point, and that should be the last statement in the method
8125	src/pipe/modules/passage/Passage.java	188	Avoid using if...else statements without curly braces
8126	src/pipe/modules/passage/Passage.java	190	Avoid if (x != y) ..; else ..;
8127	src/pipe/modules/passage/Passage.java	191	Avoid using if...else statements without curly braces
8128	src/pipe/modules/passage/Passage.java	191	Prefer StringBuffer over += for concatenating strings
8129	src/pipe/modules/passage/Passage.java	194	Avoid using if...else statements without curly braces
8130	src/pipe/modules/passage/Passage.java	194	Prefer StringBuffer over += for concatenating strings
8131	src/pipe/modules/passage/Passage.java	197	Avoid using if...else statements without curly braces
8132	src/pipe/modules/passage/Passage.java	197	Prefer StringBuffer over += for concatenating strings
8133	src/pipe/modules/passage/Passage.java	200	Avoid using if...else statements without curly braces
8134	src/pipe/modules/passage/Passage.java	200	Prefer StringBuffer over += for concatenating strings
8135	src/pipe/modules/passage/Passage.java	203	Prefer StringBuffer over += for concatenating strings
8136	src/pipe/modules/passage/Passage.java	211	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
8137	src/pipe/modules/passage/Passage.java	215	To be compliant to J2EE, a webapp should not use any thread.
8138	src/pipe/modules/passage/Passage.java	215	To be compliant to J2EE, a webapp should not use any thread.
8139	src/pipe/modules/passage/Passage.java	236	Parameter 'event' is not assigned and could be declared final
8140	src/pipe/modules/passage/Passage.java	236	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
8141	src/pipe/modules/passage/Passage.java	251	Found 'DD'-anomaly for variable 'removeList' (lines '251'-'258').
8142	src/pipe/modules/passage/Passage.java	251	Found 'DD'-anomaly for variable 'removeList' (lines '251'-'263').
8143	src/pipe/modules/passage/Passage.java	251	Found 'DD'-anomaly for variable 'removeList' (lines '251'-'266').
8144	src/pipe/modules/passage/Passage.java	251	Found 'DU'-anomaly for variable 'removeList' (lines '251'-'294').
8145	src/pipe/modules/passage/Passage.java	254	Avoid variables with short names like i
8146	src/pipe/modules/passage/Passage.java	254	Avoid variables with short names like j
8147	src/pipe/modules/passage/Passage.java	254	Avoid variables with short names like k
8148	src/pipe/modules/passage/Passage.java	254	Found 'DD'-anomaly for variable 'i' (lines '254'-'255').
8149	src/pipe/modules/passage/Passage.java	257	Avoid using while statements without curly braces
8150	src/pipe/modules/passage/Passage.java	258	Found 'DD'-anomaly for variable 'removeList' (lines '258'-'258').
8151	src/pipe/modules/passage/Passage.java	258	Found 'DD'-anomaly for variable 'removeList' (lines '258'-'263').
8152	src/pipe/modules/passage/Passage.java	260	Avoid using if statements without curly braces
8153	src/pipe/modules/passage/Passage.java	263	Found 'DD'-anomaly for variable 'removeList' (lines '263'-'258').
8154	src/pipe/modules/passage/Passage.java	263	Found 'DD'-anomaly for variable 'removeList' (lines '263'-'263').
8155	src/pipe/modules/passage/Passage.java	263	Found 'DD'-anomaly for variable 'removeList' (lines '263'-'266').
8156	src/pipe/modules/passage/Passage.java	263	Found 'DU'-anomaly for variable 'removeList' (lines '263'-'294').
8157	src/pipe/modules/passage/Passage.java	265	Avoid using while statements without curly braces
8158	src/pipe/modules/passage/Passage.java	266	Found 'DD'-anomaly for variable 'removeList' (lines '266'-'266').
8159	src/pipe/modules/passage/Passage.java	266	Found 'DU'-anomaly for variable 'removeList' (lines '266'-'294').
8160	src/pipe/modules/passage/Passage.java	270	Avoid using for statements without curly braces
8161	src/pipe/modules/passage/Passage.java	282	Avoid using if statements without curly braces
8162	src/pipe/modules/passage/Passage.java	304	This statement may have some unnecessary parentheses
8163	src/pipe/modules/passage/Passage.java	386	Parameter 'states' is not assigned and could be declared final
8164	src/pipe/modules/passage/Passage.java	389	Found 'DD'-anomaly for variable 'names' (lines '389'-'392').
8165	src/pipe/modules/passage/Passage.java	391	Avoid using for statements without curly braces
8166	src/pipe/modules/passage/Passage.java	392	Found 'DD'-anomaly for variable 'names' (lines '392'-'392').
8167	src/pipe/modules/passage/Passage.java	414	This statement may have some unnecessary parentheses
8168	src/pipe/modules/passage/Passage.java	475	Avoid using implementation types like 'ArrayList'; use the interface instead
8169	src/pipe/modules/passage/Passage.java	475	Avoid using implementation types like 'ArrayList'; use the interface instead
8170	src/pipe/modules/passage/Passage.java	486	Avoid using for statements without curly braces
8171	src/pipe/modules/passage/Passage.java	489	A method should have only one exit point, and that should be the last statement in the method
8172	src/pipe/modules/passage/Passage.java	502	Found 'DU'-anomaly for variable 'startString' (lines '502'-'533').
8173	src/pipe/modules/passage/Passage.java	503	Found 'DU'-anomaly for variable 'endString' (lines '503'-'533').
8174	src/pipe/modules/passage/Passage.java	504	Found 'DU'-anomaly for variable 'step' (lines '504'-'533').
8175	src/pipe/modules/passage/Passage.java	505	Found 'DU'-anomaly for variable 'method' (lines '505'-'533').
8176	src/pipe/modules/passage/Passage.java	513	A method should have only one exit point, and that should be the last statement in the method
8177	src/pipe/modules/passage/Passage.java	515	Unnecessary wrapper object creation
8178	src/pipe/modules/passage/Passage.java	516	Unnecessary wrapper object creation
8179	src/pipe/modules/passage/Passage.java	519	Found 'DU'-anomaly for variable 'numProcessors' (lines '519'-'533').
8180	src/pipe/modules/passage/Passage.java	523	A method should have only one exit point, and that should be the last statement in the method
8181	src/pipe/modules/passage/Passage.java	525	A method should have only one exit point, and that should be the last statement in the method
8182	src/pipe/modules/passage/Passage.java	559	Avoid unnecessary comparisons in boolean expressions
8183	src/pipe/modules/passage/Passage.java	559	Avoid using if statements without curly braces
8184	src/pipe/modules/passage/ProgressBarHTMLPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
8185	src/pipe/modules/passage/ProgressBarHTMLPane.java	26	Use explicit scoping instead of the default package private level
8186	src/pipe/modules/passage/ProgressBarHTMLPane.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
8187	src/pipe/modules/passage/ProgressBarHTMLPane.java	27	Use explicit scoping instead of the default package private level
8188	src/pipe/modules/passage/ProgressBarHTMLPane.java	29	Parameter 'title' is not assigned and could be declared final
8189	src/pipe/modules/passage/ProgressBarHTMLPane.java	38	Local variable 'scroller' could be declared final
8190	src/pipe/modules/passage/ProgressBarHTMLPane.java	51	Parameter 'text' is not assigned and could be declared final
8191	src/pipe/modules/passage/ProgressBarHTMLPane.java	69	Parameter 'max' is not assigned and could be declared final
8192	src/pipe/modules/passage/ProgressBarHTMLPane.java	69	Parameter 'min' is not assigned and could be declared final
8193	src/pipe/modules/passage/ProgressBarHTMLPane.java	76	Parameter 'newValue' is not assigned and could be declared final
8194	src/pipe/modules/passage/ResultsGraph.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
8195	src/pipe/modules/passage/ResultsGraph.java	31	Use explicit scoping instead of the default package private level
8196	src/pipe/modules/passage/ResultsGraph.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
8197	src/pipe/modules/passage/ResultsGraph.java	47	Private field 'saveButtonClick' could be made final; it is only initialized in the declaration or constructor.
8198	src/pipe/modules/passage/ResultsGraph.java	49	Avoid variables with short names like e
8199	src/pipe/modules/passage/ResultsGraph.java	49	Parameter 'e' is not assigned and could be declared final
8200	src/pipe/modules/passage/ResultsGraph.java	51	Found 'DD'-anomaly for variable 'filename' (lines '51'-'52').
8201	src/pipe/modules/passage/ResultsGraph.java	51	Found 'DD'-anomaly for variable 'filename' (lines '51'-'53').
8202	src/pipe/modules/passage/ResultsGraph.java	52	Avoid using if statements without curly braces
8203	src/pipe/modules/passage/ResultsGraph.java	52	Found 'DD'-anomaly for variable 'filename' (lines '52'-'53').
8204	src/pipe/modules/passage/ResultsGraph.java	54	Avoid using if statements without curly braces
8205	src/pipe/modules/passage/ResultsGraph.java	56	Avoid variables with short names like b
8206	src/pipe/modules/passage/ResultsGraph.java	56	Local variable 'b' could be declared final
8207	src/pipe/modules/passage/ResultsGraph.java	58	Avoid variables with short names like d
8208	src/pipe/modules/passage/ResultsGraph.java	58	Local variable 'd' could be declared final
8209	src/pipe/modules/passage/ResultsGraph.java	65	Avoid empty catch blocks
8210	src/pipe/modules/passage/ResultsGraph.java	70	Use block level rather than method level synchronization
8211	src/pipe/modules/passage/ResultsReceiver.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
8212	src/pipe/modules/passage/ResultsReceiver.java	39	Private field 'server' could be made final; it is only initialized in the declaration or constructor.
8213	src/pipe/modules/passage/ResultsReceiver.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8214	src/pipe/modules/passage/ResultsReceiver.java	40	Private field 'resultsPanel' could be made final; it is only initialized in the declaration or constructor.
8215	src/pipe/modules/passage/ResultsReceiver.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8216	src/pipe/modules/passage/ResultsReceiver.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8217	src/pipe/modules/passage/ResultsReceiver.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8218	src/pipe/modules/passage/ResultsReceiver.java	42	Perhaps 'pdfChartPanel' could be replaced by a local variable.
8219	src/pipe/modules/passage/ResultsReceiver.java	47	Use explicit scoping instead of the default package private level
8220	src/pipe/modules/passage/ResultsReceiver.java	50	Use explicit scoping instead of the default package private level
8221	src/pipe/modules/passage/ResultsReceiver.java	50	Variables should start with a lowercase character
8222	src/pipe/modules/passage/ResultsReceiver.java	53	Avoid unused constructor parameters such as 'currentStatus'.
8223	src/pipe/modules/passage/ResultsReceiver.java	53	Parameter 'currentStatus' is not assigned and could be declared final
8224	src/pipe/modules/passage/ResultsReceiver.java	53	Parameter 'resultsPanel' is not assigned and could be declared final
8225	src/pipe/modules/passage/ResultsReceiver.java	53	Parameter 'server' is not assigned and could be declared final
8226	src/pipe/modules/passage/ResultsReceiver.java	59	Avoid really long methods.
8227	src/pipe/modules/passage/ResultsReceiver.java	61	Local variable 'results' could be declared final
8228	src/pipe/modules/passage/ResultsReceiver.java	64	Local variable 'points' could be declared final
8229	src/pipe/modules/passage/ResultsReceiver.java	65	Found 'DU'-anomaly for variable 'CDFpoints' (lines '65'-'166').
8230	src/pipe/modules/passage/ResultsReceiver.java	65	Local variable 'CDFpoints' could be declared final
8231	src/pipe/modules/passage/ResultsReceiver.java	66	Found 'DD'-anomaly for variable 'doCDF' (lines '66'-'83').
8232	src/pipe/modules/passage/ResultsReceiver.java	75	Avoid variables with short names like i
8233	src/pipe/modules/passage/ResultsReceiver.java	84	Found 'DU'-anomaly for variable 'i' (lines '84'-'166').
8234	src/pipe/modules/passage/ResultsReceiver.java	89	Avoid instantiating new objects inside loops
8235	src/pipe/modules/passage/ResultsReceiver.java	89	Avoid instantiating new objects inside loops
8236	src/pipe/modules/passage/ResultsReceiver.java	98	Avoid instantiating new objects inside loops
8237	src/pipe/modules/passage/ResultsReceiver.java	98	Avoid instantiating new objects inside loops
8238	src/pipe/modules/passage/ResultsReceiver.java	121	Avoid using if statements without curly braces
8239	src/pipe/modules/passage/ResultsReceiver.java	131	Local variable 'buttons' could be declared final
8240	src/pipe/modules/passage/ResultsReceiver.java	142	Local variable 'saveImageBtn' could be declared final
8241	src/pipe/modules/passage/ResultsReceiver.java	169	Use explicit scoping instead of the default package private level
8242	src/pipe/modules/passage/ResultsReceiver.java	171	Parameter 'eve' is not assigned and could be declared final
8243	src/pipe/modules/passage/ResultsReceiver.java	184	Use bitwise inversion to invert boolean values
8244	src/pipe/modules/passage/ResultsReceiver.java	190	Use explicit scoping instead of the default package private level
8245	src/pipe/modules/passage/ResultsReceiver.java	192	Parameter 'eve' is not assigned and could be declared final
8246	src/pipe/modules/passage/ResultsReceiver.java	197	Avoid using if...else statements without curly braces
8247	src/pipe/modules/passage/ResultsReceiver.java	197	Found 'DU'-anomaly for variable 'graphImage' (lines '197'-'216').
8248	src/pipe/modules/passage/ResultsReceiver.java	199	Avoid using if...else statements without curly braces
8249	src/pipe/modules/passage/ResultsReceiver.java	199	Found 'DU'-anomaly for variable 'graphImage' (lines '199'-'216').
8250	src/pipe/modules/passage/ResultsReceiver.java	203	Avoid variables with short names like fc
8251	src/pipe/modules/passage/ResultsReceiver.java	209	Avoid using if...else statements without curly braces
8252	src/pipe/modules/passage/ResultsReceiver.java	214	Avoid printStackTrace(); use a logger call instead.
8253	src/pipe/modules/passage/ResultsReceiver.java	221	Private field 'cvsListener' could be made final; it is only initialized in the declaration or constructor.
8254	src/pipe/modules/passage/ResultsReceiver.java	226	Avoid using if...else statements without curly braces
8255	src/pipe/modules/passage/ResultsReceiver.java	228	Avoid using if...else statements without curly braces
8256	src/pipe/modules/passage/ResultsReceiver.java	230	Found 'DU'-anomaly for variable 'size' (lines '230'-'267').
8257	src/pipe/modules/passage/ResultsReceiver.java	232	Avoid variables with short names like fw
8258	src/pipe/modules/passage/ResultsReceiver.java	232	Found 'DD'-anomaly for variable 'fw' (lines '232'-'247').
8259	src/pipe/modules/passage/ResultsReceiver.java	232	Found 'DU'-anomaly for variable 'fw' (lines '232'-'267').
8260	src/pipe/modules/passage/ResultsReceiver.java	233	Found 'DU'-anomaly for variable 'content' (lines '233'-'267').
8261	src/pipe/modules/passage/ResultsReceiver.java	237	Avoid variables with short names like fc
8262	src/pipe/modules/passage/ResultsReceiver.java	250	Avoid printStackTrace(); use a logger call instead.
8263	src/pipe/modules/passage/ResultsReceiver.java	254	Avoid appending characters as strings in StringBuffer.append.
8264	src/pipe/modules/passage/ResultsReceiver.java	265	Avoid printStackTrace(); use a logger call instead.
8265	src/pipe/modules/passage/ServerPanelProcessors.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8266	src/pipe/modules/passage/ServerPanelProcessors.java	24	Perhaps 'serverPanel' could be replaced by a local variable.
8267	src/pipe/modules/passage/ServerPanelProcessors.java	24	Private field 'serverPanel' could be made final; it is only initialized in the declaration or constructor.
8268	src/pipe/modules/passage/ServerPanelProcessors.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
8269	src/pipe/modules/passage/ServerPanelProcessors.java	25	Private field 'processorNo' could be made final; it is only initialized in the declaration or constructor.
8270	src/pipe/modules/passage/ServerPanelProcessors.java	27	Parameter 'parent' is not assigned and could be declared final
8271	src/pipe/modules/passage/ServerPanelProcessors.java	47	Local variable 'value' could be declared final
8272	src/pipe/modules/passage/StateEditor.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8273	src/pipe/modules/passage/StateEditor.java	41	Use explicit scoping instead of the default package private level
8274	src/pipe/modules/passage/StateEditor.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8275	src/pipe/modules/passage/StateEditor.java	42	Use explicit scoping instead of the default package private level
8276	src/pipe/modules/passage/StateEditor.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
8277	src/pipe/modules/passage/StateEditor.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
8278	src/pipe/modules/passage/StateEditor.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
8279	src/pipe/modules/passage/StateEditor.java	43	Use explicit scoping instead of the default package private level
8280	src/pipe/modules/passage/StateEditor.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
8281	src/pipe/modules/passage/StateEditor.java	44	Use explicit scoping instead of the default package private level
8282	src/pipe/modules/passage/StateEditor.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
8283	src/pipe/modules/passage/StateEditor.java	48	Use explicit scoping instead of the default package private level
8284	src/pipe/modules/passage/StateEditor.java	52	Avoid excessively long variable names like stateNameTextField
8285	src/pipe/modules/passage/StateEditor.java	57	Parameter 'pnmlData' is not assigned and could be declared final
8286	src/pipe/modules/passage/StateEditor.java	65	Parameter 'editStateGroup' is not assigned and could be declared final
8287	src/pipe/modules/passage/StateEditor.java	65	Parameter 'pnmlData' is not assigned and could be declared final
8288	src/pipe/modules/passage/StateEditor.java	72	Parameter 'parentRef' is not assigned and could be declared final
8289	src/pipe/modules/passage/StateEditor.java	84	Local variable 'stateContainer' could be declared final
8290	src/pipe/modules/passage/StateEditor.java	87	Local variable 'stateViewPanel' could be declared final
8291	src/pipe/modules/passage/StateEditor.java	90	This statement may have some unnecessary parentheses
8292	src/pipe/modules/passage/StateEditor.java	95	Local variable 'stateNamePanel' could be declared final
8293	src/pipe/modules/passage/StateEditor.java	97	Local variable 'stateNameLabel' could be declared final
8294	src/pipe/modules/passage/StateEditor.java	111	Local variable 'saveButtonPanel' could be declared final
8295	src/pipe/modules/passage/StateEditor.java	128	This statement may have some unnecessary parentheses
8296	src/pipe/modules/passage/StateEditor.java	130	Avoid excessively long variable names like viewPanelPreferredWidth
8297	src/pipe/modules/passage/StateEditor.java	131	Avoid excessively long variable names like viewPanelPreferredHeight
8298	src/pipe/modules/passage/StateEditor.java	132	Avoid excessively long variable names like viewPanelPreferredSize
8299	src/pipe/modules/passage/StateEditor.java	139	This statement may have some unnecessary parentheses
8300	src/pipe/modules/passage/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
8301	src/pipe/modules/passage/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
8302	src/pipe/modules/passage/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
8303	src/pipe/modules/passage/StateEditor.java	171	Parameter 'placeA' is not assigned and could be declared final
8304	src/pipe/modules/passage/StateEditor.java	174	Position literals first in String comparisons
8305	src/pipe/modules/passage/StateEditor.java	175	Avoid using if...else statements without curly braces
8306	src/pipe/modules/passage/StateEditor.java	178	Position literals first in String comparisons
8307	src/pipe/modules/passage/StateEditor.java	179	Avoid using if...else statements without curly braces
8308	src/pipe/modules/passage/StateEditor.java	180	Avoid using if statements without curly braces
8309	src/pipe/modules/passage/StateEditor.java	180	Position literals first in String comparisons
8310	src/pipe/modules/passage/StateEditor.java	194	Avoid using for statements without curly braces
8311	src/pipe/modules/passage/StateEditor.java	216	Avoid using if...else statements without curly braces
8312	src/pipe/modules/passage/StateEditor.java	222	Avoid using if statements without curly braces
8313	src/pipe/modules/passage/StateEditor.java	230	Avoid using if statements without curly braces
8314	src/pipe/modules/passage/StateEditor.java	247	Avoid using if...else statements without curly braces
8315	src/pipe/modules/passage/StateEditor.java	250	Avoid using if...else statements without curly braces
8316	src/pipe/modules/passage/StateEditor.java	252	Avoid using if statements without curly braces
8317	src/pipe/modules/passage/StateViewer.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8318	src/pipe/modules/passage/StateViewer.java	35	Use explicit scoping instead of the default package private level
8319	src/pipe/modules/passage/StateViewer.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8320	src/pipe/modules/passage/StateViewer.java	36	Use explicit scoping instead of the default package private level
8321	src/pipe/modules/passage/StateViewer.java	37	Avoid using implementation types like 'ArrayList'; use the interface instead
8322	src/pipe/modules/passage/StateViewer.java	37	Avoid using implementation types like 'ArrayList'; use the interface instead
8323	src/pipe/modules/passage/StateViewer.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
8324	src/pipe/modules/passage/StateViewer.java	37	Use explicit scoping instead of the default package private level
8325	src/pipe/modules/passage/StateViewer.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
8326	src/pipe/modules/passage/StateViewer.java	38	Use explicit scoping instead of the default package private level
8327	src/pipe/modules/passage/StateViewer.java	40	It is a good practice to call super() in a constructor
8328	src/pipe/modules/passage/StateViewer.java	50	Parameter 'parent' is not assigned and could be declared final
8329	src/pipe/modules/passage/StateViewer.java	56	Parameter 'pnmldata' is not assigned and could be declared final
8330	src/pipe/modules/passage/StateViewer.java	56	Parameter 'stateGroupData' is not assigned and could be declared final
8331	src/pipe/modules/passage/StateViewer.java	66	Local variable 'PNObjects' could be declared final
8332	src/pipe/modules/passage/StateViewer.java	68	Avoid using while statements without curly braces
8333	src/pipe/modules/passage/StateViewer.java	74	Parameter 'diffObj' is not assigned and could be declared final
8334	src/pipe/modules/passage/StateViewer.java	76	Avoid using if statements without curly braces
8335	src/pipe/modules/passage/StateViewer.java	76	No need to check for null before an instanceof
8336	src/pipe/modules/passage/StateViewer.java	84	Local variable 'components' could be declared final
8337	src/pipe/modules/passage/StateViewer.java	85	Avoid variables with short names like d
8338	src/pipe/modules/passage/StateViewer.java	85	Local variable 'd' could be declared final
8339	src/pipe/modules/passage/StateViewer.java	86	Avoid variables with short names like x
8340	src/pipe/modules/passage/StateViewer.java	86	Avoid variables with short names like y
8341	src/pipe/modules/passage/StateViewer.java	90	Avoid variables with short names like r
8342	src/pipe/modules/passage/StateViewer.java	90	Local variable 'r' could be declared final
8343	src/pipe/modules/passage/StateViewer.java	93	Avoid using if statements without curly braces
8344	src/pipe/modules/passage/StateViewer.java	94	Avoid using if statements without curly braces
8345	src/pipe/modules/passage/StateViewer.java	100	Parameter 'currentObj' is not assigned and could be declared final
8346	src/pipe/modules/passage/StateViewer.java	104	Local variable 'place' could be declared final
8347	src/pipe/modules/passage/StateViewer.java	108	Avoid using if statements without curly braces
8348	src/pipe/modules/passage/StateViewer.java	125	An empty statement (semicolon) not part of a loop
8349	src/pipe/modules/passage/StateViewer.java	125	Avoid empty if statements
8350	src/pipe/modules/passage/StateViewer.java	125	Avoid using if...else statements without curly braces
8351	src/pipe/modules/passage/StateViewer.java	134	Avoid using if...else statements without curly braces
8352	src/pipe/modules/passage/StateViewer.java	137	Avoid using if...else statements without curly braces
8353	src/pipe/modules/passage/StateViewer.java	140	Avoid using if...else statements without curly braces
8354	src/pipe/modules/passage/StateViewer.java	142	Avoid using if statements without curly braces
8355	src/pipe/modules/passage/StatusListener.java	7	The class 'StatusListener' has a Cyclomatic Complexity of 6 (Highest = 15).
8356	src/pipe/modules/passage/StatusListener.java	9	Found non-transient, non-static member. Please mark as transient or provide accessors.
8357	src/pipe/modules/passage/StatusListener.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
8358	src/pipe/modules/passage/StatusListener.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
8359	src/pipe/modules/passage/StatusListener.java	11	Use explicit scoping instead of the default package private level
8360	src/pipe/modules/passage/StatusListener.java	21	The method 'listen' has a Cyclomatic Complexity of 15.
8361	src/pipe/modules/passage/StatusListener.java	23	Found 'DD'-anomaly for variable 'status' (lines '23'-'28').
8362	src/pipe/modules/passage/StatusListener.java	25	Found 'DD'-anomaly for variable 'statusCount' (lines '25'-'84').
8363	src/pipe/modules/passage/StatusListener.java	25	Found 'DU'-anomaly for variable 'statusCount' (lines '25'-'96').
8364	src/pipe/modules/passage/StatusListener.java	26	Found 'DU'-anomaly for variable 'progressBar' (lines '26'-'96').
8365	src/pipe/modules/passage/StatusListener.java	32	Position literals first in String comparisons
8366	src/pipe/modules/passage/StatusListener.java	32	Position literals first in String comparisons
8367	src/pipe/modules/passage/StatusListener.java	35	Found 'DD'-anomaly for variable 'components' (lines '35'-'35').
8368	src/pipe/modules/passage/StatusListener.java	35	Found 'DU'-anomaly for variable 'components' (lines '35'-'96').
8369	src/pipe/modules/passage/StatusListener.java	40	Avoid using if...else statements without curly braces
8370	src/pipe/modules/passage/StatusListener.java	42	Avoid using if...else statements without curly braces
8371	src/pipe/modules/passage/StatusListener.java	52	The String literal "<br>" appears 7 times in this file; the first occurrence is on line 52
8372	src/pipe/modules/passage/StatusListener.java	58	Found 'DU'-anomaly for variable 'progressBar' (lines '58'-'96').
8373	src/pipe/modules/passage/StatusListener.java	63	Avoid using if statements without curly braces
8374	src/pipe/modules/passage/StatusListener.java	84	Found 'DD'-anomaly for variable 'statusCount' (lines '84'-'84').
8375	src/pipe/modules/passage/StatusListener.java	84	Found 'DU'-anomaly for variable 'statusCount' (lines '84'-'96').
8376	src/pipe/modules/passage/StatusListener.java	88	Avoid using if...else statements without curly braces
8377	src/pipe/modules/passage/StatusListener.java	90	Avoid using if statements without curly braces
8378	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	1	Package name contains upper case characters
8379	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	8	Found non-transient, non-static member. Please mark as transient or provide accessors.
8380	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	8	Found non-transient, non-static member. Please mark as transient or provide accessors.
8381	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	8	Found non-transient, non-static member. Please mark as transient or provide accessors.
8382	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	11	Parameter 'end' is not assigned and could be declared final
8383	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	11	Parameter 'start' is not assigned and could be declared final
8384	src/pipe/modules/passageTimeForTaggedNet/AnalysisSetting.java	11	Parameter 'step' is not assigned and could be declared final
8385	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	1	Package name contains upper case characters
8386	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	28	Variables that are final and static should be in all caps.
8387	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8388	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	35	Private field 'currentMarking' could be made final; it is only initialized in the declaration or constructor.
8389	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
8390	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	38	Private field 'defaultColor' could be made final; it is only initialized in the declaration or constructor.
8391	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
8392	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	39	Private field 'validColor' could be made final; it is only initialized in the declaration or constructor.
8393	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8394	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8395	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	49	Parameter 'setTo' is not assigned and could be declared final
8396	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	56	Parameter 'inputPlace' is not assigned and could be declared final
8397	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	60	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
8398	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	73	Avoid variables with short names like g
8399	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	73	Parameter 'g' is not assigned and could be declared final
8400	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	76	Avoid variables with short names like g2
8401	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	76	Local variable 'g2' could be declared final
8402	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	77	Local variable 'saveXform' could be declared final
8403	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	78	Local variable 'scaledXform' could be declared final
8404	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	79	Local variable 'insets' could be declared final
8405	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	80	Avoid variables with short names like x
8406	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	80	Local variable 'x' could be declared final
8407	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	81	Avoid variables with short names like y
8408	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	93	Avoid using if...else statements without curly braces
8409	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	95	Avoid using if...else statements without curly braces
8410	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	114	A method should have only one exit point, and that should be the last statement in the method
8411	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	114	Avoid using if...else statements without curly braces
8412	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	116	Avoid using if...else statements without curly braces
8413	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	146	Avoid variables with short names like x
8414	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	146	Parameter 'x' is not assigned and could be declared final
8415	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	146	Parameter 'y' is not assigned and could be declared final
8416	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	156	Overriding method merely calls super
8417	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	156	clone() method should throw CloneNotSupportedException
8418	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	160	Avoid reassigning parameters such as 'operand'
8419	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	160	Avoid reassigning parameters such as 'operator'
8420	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	160	Avoid reassigning parameters such as 'operator'
8421	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	163	Position literals first in String comparisons
8422	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	164	Avoid using if...else statements without curly braces
8423	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	165	Avoid using if statements without curly braces
8424	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	165	Position literals first in String comparisons
8425	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	168	Position literals first in String comparisons
8426	src/pipe/modules/passageTimeForTaggedNet/ConditionPlace.java	190	Document empty method
8427	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	1	Package name contains upper case characters
8428	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
8429	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8430	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
8431	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
8432	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	38	Use explicit scoping instead of the default package private level
8433	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
8434	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	39	Use explicit scoping instead of the default package private level
8435	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	40	Use explicit scoping instead of the default package private level
8436	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	42	Use explicit scoping instead of the default package private level
8437	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	44	It is a good practice to call super() in a constructor
8438	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	44	Parameter 'data' is not assigned and could be declared final
8439	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	44	Parameter 'parentDialog' is not assigned and could be declared final
8440	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	44	Parameter 'place' is not assigned and could be declared final
8441	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	59	Local variable 'contentPane' could be declared final
8442	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	65	Local variable 'mainPanel' could be declared final
8443	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	96	Local variable 'buttonPanel' could be declared final
8444	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	126	Use explicit scoping instead of the default package private level
8445	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	128	Parameter 'event' is not assigned and could be declared final
8446	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	132	Avoid using if...else statements without curly braces
8447	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	132	Position literals first in String comparisons
8448	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	133	Avoid using if...else statements without curly braces
8449	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	143	Variables should start with a lowercase character
8450	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	145	Parameter 'event' is not assigned and could be declared final
8451	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	156	Found 'DU'-anomaly for variable 'placeStr' (lines '156'-'195').
8452	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	160	Position literals first in String comparisons
8453	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	165	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
8454	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	165	Local variable 'targetStrInt' could be declared final
8455	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	170	Avoid using if...else statements without curly braces
8456	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	186	System.out.print is used
8457	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	204	Avoid variables with short names like e
8458	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	208	Avoid using if...else statements without curly braces
8459	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	212	Local variable 'popup' could be declared final
8460	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	222	A method should have only one exit point, and that should be the last statement in the method
8461	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	222	Avoid using if...else statements without curly braces
8462	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	222	Use equals() to compare strings instead of '==' or '!='
8463	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	226	Avoid unnecessary if..then..else statements when returning a boolean
8464	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	227	A method should have only one exit point, and that should be the last statement in the method
8465	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	229	A method should have only one exit point, and that should be the last statement in the method
8466	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	242	Avoid variables with short names like e
8467	src/pipe/modules/passageTimeForTaggedNet/ConditionPlaceHandler.java	250	Avoid variables with short names like e
8468	src/pipe/modules/passageTimeForTaggedNet/Passage.java	1	A high number of imports can indicate a high degree of coupling within an object.
8469	src/pipe/modules/passageTimeForTaggedNet/Passage.java	1	Package name contains upper case characters
8470	src/pipe/modules/passageTimeForTaggedNet/Passage.java	3	Avoid unused imports such as 'java.awt.BorderLayout'
8471	src/pipe/modules/passageTimeForTaggedNet/Passage.java	3	Avoid unused imports such as 'java.awt.BorderLayout'
8472	src/pipe/modules/passageTimeForTaggedNet/Passage.java	4	Avoid unused imports such as 'java.awt.CardLayout'
8473	src/pipe/modules/passageTimeForTaggedNet/Passage.java	4	Avoid unused imports such as 'java.awt.CardLayout'
8474	src/pipe/modules/passageTimeForTaggedNet/Passage.java	5	Avoid unused imports such as 'java.awt.Color'
8475	src/pipe/modules/passageTimeForTaggedNet/Passage.java	5	Avoid unused imports such as 'java.awt.Color'
8476	src/pipe/modules/passageTimeForTaggedNet/Passage.java	11	Avoid unused imports such as 'java.awt.event.ItemEvent'
8477	src/pipe/modules/passageTimeForTaggedNet/Passage.java	11	Avoid unused imports such as 'java.awt.event.ItemEvent'
8478	src/pipe/modules/passageTimeForTaggedNet/Passage.java	12	Avoid unused imports such as 'java.awt.event.ItemListener'
8479	src/pipe/modules/passageTimeForTaggedNet/Passage.java	12	Avoid unused imports such as 'java.awt.event.ItemListener'
8480	src/pipe/modules/passageTimeForTaggedNet/Passage.java	63	The class 'Passage' has a Cyclomatic Complexity of 4 (Highest = 13).
8481	src/pipe/modules/passageTimeForTaggedNet/Passage.java	68	Found non-transient, non-static member. Please mark as transient or provide accessors.
8482	src/pipe/modules/passageTimeForTaggedNet/Passage.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
8483	src/pipe/modules/passageTimeForTaggedNet/Passage.java	71	Found non-transient, non-static member. Please mark as transient or provide accessors.
8484	src/pipe/modules/passageTimeForTaggedNet/Passage.java	71	Use explicit scoping instead of the default package private level
8485	src/pipe/modules/passageTimeForTaggedNet/Passage.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
8486	src/pipe/modules/passageTimeForTaggedNet/Passage.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
8487	src/pipe/modules/passageTimeForTaggedNet/Passage.java	72	Use explicit scoping instead of the default package private level
8488	src/pipe/modules/passageTimeForTaggedNet/Passage.java	73	Use explicit scoping instead of the default package private level
8489	src/pipe/modules/passageTimeForTaggedNet/Passage.java	74	Use explicit scoping instead of the default package private level
8490	src/pipe/modules/passageTimeForTaggedNet/Passage.java	79	Use explicit scoping instead of the default package private level
8491	src/pipe/modules/passageTimeForTaggedNet/Passage.java	86	Perhaps 'guiDialog' could be replaced by a local variable.
8492	src/pipe/modules/passageTimeForTaggedNet/Passage.java	88	Avoid unnecessary constructors - the compiler will generate these for you
8493	src/pipe/modules/passageTimeForTaggedNet/Passage.java	88	Document empty constructor
8494	src/pipe/modules/passageTimeForTaggedNet/Passage.java	97	Parameter 'pnmlDataIn' is not assigned and could be declared final
8495	src/pipe/modules/passageTimeForTaggedNet/Passage.java	109	Local variable 'contentPane' could be declared final
8496	src/pipe/modules/passageTimeForTaggedNet/Passage.java	114	Local variable 'setupPanel' could be declared final
8497	src/pipe/modules/passageTimeForTaggedNet/Passage.java	169	Parameter 'arg0' is not assigned and could be declared final
8498	src/pipe/modules/passageTimeForTaggedNet/Passage.java	171	Avoid unused local variables such as 'result'.
8499	src/pipe/modules/passageTimeForTaggedNet/Passage.java	171	Found 'DU'-anomaly for variable 'result' (lines '171'-'172').
8500	src/pipe/modules/passageTimeForTaggedNet/Passage.java	171	Local variable 'result' could be declared final
8501	src/pipe/modules/passageTimeForTaggedNet/Passage.java	176	Avoid excessively long variable names like analyseButtonClick
8502	src/pipe/modules/passageTimeForTaggedNet/Passage.java	178	Parameter 'arg0' is not assigned and could be declared final
8503	src/pipe/modules/passageTimeForTaggedNet/Passage.java	178	The method 'actionPerformed' has a Cyclomatic Complexity of 12.
8504	src/pipe/modules/passageTimeForTaggedNet/Passage.java	181	Found 'DU'-anomaly for variable 'sourceStateGroups' (lines '181'-'243').
8505	src/pipe/modules/passageTimeForTaggedNet/Passage.java	181	Local variable 'sourceStateGroups' could be declared final
8506	src/pipe/modules/passageTimeForTaggedNet/Passage.java	182	Avoid excessively long variable names like destinationStateGroups
8507	src/pipe/modules/passageTimeForTaggedNet/Passage.java	182	Found 'DU'-anomaly for variable 'destinationStateGroups' (lines '182'-'243').
8508	src/pipe/modules/passageTimeForTaggedNet/Passage.java	182	Local variable 'destinationStateGroups' could be declared final
8509	src/pipe/modules/passageTimeForTaggedNet/Passage.java	184	Found 'DU'-anomaly for variable 'analysisSetting' (lines '184'-'243').
8510	src/pipe/modules/passageTimeForTaggedNet/Passage.java	205	Found 'DU'-anomaly for variable 'statusMesg' (lines '205'-'243').
8511	src/pipe/modules/passageTimeForTaggedNet/Passage.java	208	Avoid using if...else statements without curly braces
8512	src/pipe/modules/passageTimeForTaggedNet/Passage.java	210	Avoid if (x != y) ..; else ..;
8513	src/pipe/modules/passageTimeForTaggedNet/Passage.java	211	Avoid using if...else statements without curly braces
8514	src/pipe/modules/passageTimeForTaggedNet/Passage.java	211	Prefer StringBuffer over += for concatenating strings
8515	src/pipe/modules/passageTimeForTaggedNet/Passage.java	213	Avoid if (x != y) ..; else ..;
8516	src/pipe/modules/passageTimeForTaggedNet/Passage.java	214	Avoid using if...else statements without curly braces
8517	src/pipe/modules/passageTimeForTaggedNet/Passage.java	214	Prefer StringBuffer over += for concatenating strings
8518	src/pipe/modules/passageTimeForTaggedNet/Passage.java	218	Avoid using if...else statements without curly braces
8519	src/pipe/modules/passageTimeForTaggedNet/Passage.java	218	Prefer StringBuffer over += for concatenating strings
8520	src/pipe/modules/passageTimeForTaggedNet/Passage.java	221	Avoid using if...else statements without curly braces
8521	src/pipe/modules/passageTimeForTaggedNet/Passage.java	221	Prefer StringBuffer over += for concatenating strings
8522	src/pipe/modules/passageTimeForTaggedNet/Passage.java	224	Prefer StringBuffer over += for concatenating strings
8523	src/pipe/modules/passageTimeForTaggedNet/Passage.java	228	Avoid unused local variables such as 'model'.
8524	src/pipe/modules/passageTimeForTaggedNet/Passage.java	228	Found 'DU'-anomaly for variable 'model' (lines '228'-'243').
8525	src/pipe/modules/passageTimeForTaggedNet/Passage.java	237	Avoid using if statements without curly braces
8526	src/pipe/modules/passageTimeForTaggedNet/Passage.java	267	Unnecessary wrapper object creation
8527	src/pipe/modules/passageTimeForTaggedNet/Passage.java	268	Unnecessary wrapper object creation
8528	src/pipe/modules/passageTimeForTaggedNet/Passage.java	275	A method should have only one exit point, and that should be the last statement in the method
8529	src/pipe/modules/passageTimeForTaggedNet/Passage.java	277	A method should have only one exit point, and that should be the last statement in the method
8530	src/pipe/modules/passageTimeForTaggedNet/Passage.java	294	Parameter 'event' is not assigned and could be declared final
8531	src/pipe/modules/passageTimeForTaggedNet/Passage.java	294	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
8532	src/pipe/modules/passageTimeForTaggedNet/Passage.java	309	Found 'DD'-anomaly for variable 'removeList' (lines '309'-'316').
8533	src/pipe/modules/passageTimeForTaggedNet/Passage.java	309	Found 'DD'-anomaly for variable 'removeList' (lines '309'-'321').
8534	src/pipe/modules/passageTimeForTaggedNet/Passage.java	309	Found 'DD'-anomaly for variable 'removeList' (lines '309'-'324').
8535	src/pipe/modules/passageTimeForTaggedNet/Passage.java	309	Found 'DU'-anomaly for variable 'removeList' (lines '309'-'352').
8536	src/pipe/modules/passageTimeForTaggedNet/Passage.java	312	Avoid variables with short names like i
8537	src/pipe/modules/passageTimeForTaggedNet/Passage.java	312	Avoid variables with short names like j
8538	src/pipe/modules/passageTimeForTaggedNet/Passage.java	312	Avoid variables with short names like k
8539	src/pipe/modules/passageTimeForTaggedNet/Passage.java	312	Found 'DD'-anomaly for variable 'i' (lines '312'-'313').
8540	src/pipe/modules/passageTimeForTaggedNet/Passage.java	315	Avoid using while statements without curly braces
8541	src/pipe/modules/passageTimeForTaggedNet/Passage.java	316	Found 'DD'-anomaly for variable 'removeList' (lines '316'-'316').
8542	src/pipe/modules/passageTimeForTaggedNet/Passage.java	316	Found 'DD'-anomaly for variable 'removeList' (lines '316'-'321').
8543	src/pipe/modules/passageTimeForTaggedNet/Passage.java	318	Avoid using if statements without curly braces
8544	src/pipe/modules/passageTimeForTaggedNet/Passage.java	321	Found 'DD'-anomaly for variable 'removeList' (lines '321'-'316').
8545	src/pipe/modules/passageTimeForTaggedNet/Passage.java	321	Found 'DD'-anomaly for variable 'removeList' (lines '321'-'321').
8546	src/pipe/modules/passageTimeForTaggedNet/Passage.java	321	Found 'DD'-anomaly for variable 'removeList' (lines '321'-'324').
8547	src/pipe/modules/passageTimeForTaggedNet/Passage.java	321	Found 'DU'-anomaly for variable 'removeList' (lines '321'-'352').
8548	src/pipe/modules/passageTimeForTaggedNet/Passage.java	323	Avoid using while statements without curly braces
8549	src/pipe/modules/passageTimeForTaggedNet/Passage.java	324	Found 'DD'-anomaly for variable 'removeList' (lines '324'-'324').
8550	src/pipe/modules/passageTimeForTaggedNet/Passage.java	324	Found 'DU'-anomaly for variable 'removeList' (lines '324'-'352').
8551	src/pipe/modules/passageTimeForTaggedNet/Passage.java	328	Avoid using for statements without curly braces
8552	src/pipe/modules/passageTimeForTaggedNet/Passage.java	340	Avoid using if statements without curly braces
8553	src/pipe/modules/passageTimeForTaggedNet/Passage.java	362	This statement may have some unnecessary parentheses
8554	src/pipe/modules/passageTimeForTaggedNet/Passage.java	444	Parameter 'states' is not assigned and could be declared final
8555	src/pipe/modules/passageTimeForTaggedNet/Passage.java	447	Found 'DD'-anomaly for variable 'names' (lines '447'-'450').
8556	src/pipe/modules/passageTimeForTaggedNet/Passage.java	449	Avoid using for statements without curly braces
8557	src/pipe/modules/passageTimeForTaggedNet/Passage.java	450	Found 'DD'-anomaly for variable 'names' (lines '450'-'450').
8558	src/pipe/modules/passageTimeForTaggedNet/Passage.java	472	This statement may have some unnecessary parentheses
8559	src/pipe/modules/passageTimeForTaggedNet/Passage.java	490	System.out.print is used
8560	src/pipe/modules/passageTimeForTaggedNet/Passage.java	538	Avoid using implementation types like 'ArrayList'; use the interface instead
8561	src/pipe/modules/passageTimeForTaggedNet/Passage.java	538	Avoid using implementation types like 'ArrayList'; use the interface instead
8562	src/pipe/modules/passageTimeForTaggedNet/Passage.java	549	Avoid using for statements without curly braces
8563	src/pipe/modules/passageTimeForTaggedNet/Passage.java	552	A method should have only one exit point, and that should be the last statement in the method
8564	src/pipe/modules/passageTimeForTaggedNet/Passage.java	579	Avoid unnecessary comparisons in boolean expressions
8565	src/pipe/modules/passageTimeForTaggedNet/Passage.java	579	Avoid using if statements without curly braces
8566	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	1	Package name contains upper case characters
8567	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	32	Avoid unused imports such as 'pipe.modules.passage.ProgressBarHTMLPane'
8568	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	32	Avoid unused imports such as 'pipe.modules.passage.ProgressBarHTMLPane'
8569	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	34	Too many fields
8570	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8571	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	36	Private field 'resultsPanel' could be made final; it is only initialized in the declaration or constructor.
8572	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
8573	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	38	Use explicit scoping instead of the default package private level
8574	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
8575	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	39	Use explicit scoping instead of the default package private level
8576	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	39	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
8577	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	40	Use explicit scoping instead of the default package private level
8578	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8579	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8580	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	42	Use explicit scoping instead of the default package private level
8581	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	42	Variables should start with a lowercase character
8582	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	45	Perhaps 'pdfChartPanel' could be replaced by a local variable.
8583	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	48	Use explicit scoping instead of the default package private level
8584	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	53	Parameter 'resultPanel' is not assigned and could be declared final
8585	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	62	Avoid if (x != y) ..; else ..;
8586	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	64	A method should have only one exit point, and that should be the last statement in the method
8587	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	68	A method should have only one exit point, and that should be the last statement in the method
8588	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	68	Avoid using if...else statements without curly braces
8589	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	69	Avoid using if...else statements without curly braces
8590	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	75	Avoid really long methods.
8591	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	75	Method names should not contain underscores
8592	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	83	Local variable 'points' could be declared final
8593	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	84	Local variable 'CDFpoints' could be declared final
8594	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	88	Avoid variables with short names like pe
8595	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	88	Local variable 'pe' could be declared final
8596	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	89	Avoid variables with short names like p
8597	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	89	Local variable 'p' could be declared final
8598	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	99	Avoid instantiating new objects inside loops
8599	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	99	Avoid instantiating new objects inside loops
8600	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	112	Avoid instantiating new objects inside loops
8601	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	112	Avoid instantiating new objects inside loops
8602	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	116	System.out.print is used
8603	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	145	Local variable 'buttons' could be declared final
8604	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	187	Avoid really long methods.
8605	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	187	Method names should not contain underscores
8606	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	191	Avoid variables with short names like rt
8607	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	201	Avoid variables with short names like br
8608	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	204	Found 'DD'-anomaly for variable 'line' (lines '204'-'210').
8609	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	206	Avoid unused local variables such as 'num'.
8610	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	206	Found 'DU'-anomaly for variable 'num' (lines '206'-'307').
8611	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	208	Found 'DD'-anomaly for variable 'start_cdf' (lines '208'-'215').
8612	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	208	Found 'DU'-anomaly for variable 'start_cdf' (lines '208'-'307').
8613	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	210	Avoid assignments in operands
8614	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	210	Found 'DD'-anomaly for variable 'line' (lines '210'-'238').
8615	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	212	System.out.print is used
8616	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	213	Avoid using if statements without curly braces
8617	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	215	Avoid using if statements without curly braces
8618	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	218	Avoid if (x != y) ..; else ..;
8619	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	229	Avoid using if statements without curly braces
8620	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	238	Avoid assignments in operands
8621	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	238	Avoid using while statements without curly braces
8622	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	238	Found 'DU'-anomaly for variable 'line' (lines '238'-'307').
8623	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	239	System.out.print is used
8624	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	298	System.out.print is used
8625	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	301	A catch statement should never catch throwable since it includes errors.
8626	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	303	Avoid printStackTrace(); use a logger call instead.
8627	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	311	Parameter 'eve' is not assigned and could be declared final
8628	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	324	Use bitwise inversion to invert boolean values
8629	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	329	Parameter 'eve' is not assigned and could be declared final
8630	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	334	Avoid using if...else statements without curly braces
8631	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	334	Found 'DU'-anomaly for variable 'graphImage' (lines '334'-'353').
8632	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	336	Avoid using if...else statements without curly braces
8633	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	336	Found 'DU'-anomaly for variable 'graphImage' (lines '336'-'353').
8634	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	340	Avoid variables with short names like fc
8635	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	346	Avoid using if...else statements without curly braces
8636	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	351	Avoid printStackTrace(); use a logger call instead.
8637	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	358	Private field 'cvsListener' could be made final; it is only initialized in the declaration or constructor.
8638	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	359	Parameter 'arg0' is not assigned and could be declared final
8639	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	367	Found 'DU'-anomaly for variable 'size' (lines '367'-'404').
8640	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	369	Found 'DD'-anomaly for variable 'fw' (lines '369'-'384').
8641	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	369	Found 'DU'-anomaly for variable 'fw' (lines '369'-'404').
8642	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	370	Found 'DU'-anomaly for variable 'content' (lines '370'-'404').
8643	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	387	Avoid printStackTrace(); use a logger call instead.
8644	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	391	Avoid appending characters as strings in StringBuffer.append.
8645	src/pipe/modules/passageTimeForTaggedNet/ResultGeneration.java	402	Avoid printStackTrace(); use a logger call instead.
8646	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	1	Package name contains upper case characters
8647	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
8648	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	33	Use explicit scoping instead of the default package private level
8649	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
8650	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	34	Use explicit scoping instead of the default package private level
8651	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
8652	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
8653	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8654	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	35	Use explicit scoping instead of the default package private level
8655	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8656	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	36	Use explicit scoping instead of the default package private level
8657	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8658	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	40	Use explicit scoping instead of the default package private level
8659	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	44	Avoid excessively long variable names like stateNameTextField
8660	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	51	A getX() method which returns a boolean should be named isX()
8661	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	53	Avoid variables with short names like i
8662	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	56	Avoid using if statements without curly braces
8663	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	57	A method should have only one exit point, and that should be the last statement in the method
8664	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	65	Parameter 'pnmlData' is not assigned and could be declared final
8665	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	73	Parameter 'editStateGroup' is not assigned and could be declared final
8666	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	73	Parameter 'pnmlData' is not assigned and could be declared final
8667	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	80	Parameter 'parentRef' is not assigned and could be declared final
8668	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	92	Local variable 'stateContainer' could be declared final
8669	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	95	Local variable 'stateViewPanel' could be declared final
8670	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	98	This statement may have some unnecessary parentheses
8671	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	103	Local variable 'stateNamePanel' could be declared final
8672	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	105	Local variable 'stateNameLabel' could be declared final
8673	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	119	Local variable 'saveButtonPanel' could be declared final
8674	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	138	This statement may have some unnecessary parentheses
8675	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	140	Avoid excessively long variable names like viewPanelPreferredWidth
8676	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	141	Avoid excessively long variable names like viewPanelPreferredHeight
8677	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	142	Avoid excessively long variable names like viewPanelPreferredSize
8678	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	149	This statement may have some unnecessary parentheses
8679	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	181	Avoid reassigning parameters such as 'operator'
8680	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	181	Avoid reassigning parameters such as 'operator'
8681	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	181	Avoid reassigning parameters such as 'operator'
8682	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	181	Parameter 'placeA' is not assigned and could be declared final
8683	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	184	Position literals first in String comparisons
8684	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	185	Avoid using if...else statements without curly braces
8685	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	188	Position literals first in String comparisons
8686	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	189	Avoid using if...else statements without curly braces
8687	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	190	Avoid using if statements without curly braces
8688	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	190	Position literals first in String comparisons
8689	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	204	Avoid using for statements without curly braces
8690	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	227	Avoid using if...else statements without curly braces
8691	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	233	Avoid using if statements without curly braces
8692	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	241	Avoid using if statements without curly braces
8693	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	259	Avoid using if...else statements without curly braces
8694	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	262	Avoid using if...else statements without curly braces
8695	src/pipe/modules/passageTimeForTaggedNet/StateEditor.java	264	Avoid using if statements without curly braces
8696	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	1	Package name contains upper case characters
8697	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
8698	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	30	Use explicit scoping instead of the default package private level
8699	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
8700	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	31	Use explicit scoping instead of the default package private level
8701	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
8702	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
8703	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
8704	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	32	Use explicit scoping instead of the default package private level
8705	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
8706	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	33	Use explicit scoping instead of the default package private level
8707	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	35	It is a good practice to call super() in a constructor
8708	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	45	Parameter 'parent' is not assigned and could be declared final
8709	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	51	Parameter 'pnmldata' is not assigned and could be declared final
8710	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	51	Parameter 'stateGroupData' is not assigned and could be declared final
8711	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	61	Local variable 'PNObjects' could be declared final
8712	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	63	Avoid using while statements without curly braces
8713	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	69	Parameter 'diffObj' is not assigned and could be declared final
8714	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	71	Avoid using if statements without curly braces
8715	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	71	No need to check for null before an instanceof
8716	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	79	Local variable 'components' could be declared final
8717	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	80	Avoid variables with short names like d
8718	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	80	Local variable 'd' could be declared final
8719	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	81	Avoid variables with short names like x
8720	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	81	Avoid variables with short names like y
8721	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	85	Avoid variables with short names like r
8722	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	85	Local variable 'r' could be declared final
8723	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	88	Avoid using if statements without curly braces
8724	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	89	Avoid using if statements without curly braces
8725	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	95	Parameter 'currentObj' is not assigned and could be declared final
8726	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	99	Local variable 'place' could be declared final
8727	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	104	Avoid if (x != y) ..; else ..;
8728	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	104	Use equals() to compare strings instead of '==' or '!='
8729	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	125	An empty statement (semicolon) not part of a loop
8730	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	125	Avoid empty if statements
8731	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	125	Avoid using if...else statements without curly braces
8732	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	134	Avoid using if...else statements without curly braces
8733	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	137	Avoid using if...else statements without curly braces
8734	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	140	Avoid using if...else statements without curly braces
8735	src/pipe/modules/passageTimeForTaggedNet/StateViewer.java	142	Avoid using if statements without curly braces
8736	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	1	Package name contains upper case characters
8737	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	20	The class 'TransModel' has a Cyclomatic Complexity of 5 (Highest = 40).
8738	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	20	This class has too many methods, consider refactoring it.
8739	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8740	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	24	Private field 'places' could be made final; it is only initialized in the declaration or constructor.
8741	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
8742	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	25	It is somewhat confusing to have a field name with the same name as a method
8743	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	25	Private field 'transitions' could be made final; it is only initialized in the declaration or constructor.
8744	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
8745	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	26	Private field 'pnmldata' could be made final; it is only initialized in the declaration or constructor.
8746	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
8747	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
8748	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	29	Private field 'tagPlace' could be made final; it is only initialized in the declaration or constructor.
8749	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	31	This final field could be made static
8750	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	31	Use explicit scoping instead of the default package private level
8751	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	32	This final field could be made static
8752	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	32	Use explicit scoping instead of the default package private level
8753	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	33	This final field could be made static
8754	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	33	Use explicit scoping instead of the default package private level
8755	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
8756	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
8757	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	35	Private field 'destStateGrps' could be made final; it is only initialized in the declaration or constructor.
8758	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Avoid using implementation types like 'ArrayList'; use the interface instead
8759	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Avoid using implementation types like 'ArrayList'; use the interface instead
8760	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Avoid using implementation types like 'ArrayList'; use the interface instead
8761	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Avoid using implementation types like 'ArrayList'; use the interface instead
8762	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Parameter 'destinationState' is not assigned and could be declared final
8763	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Parameter 'pnml' is not assigned and could be declared final
8764	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Parameter 'sourceState' is not assigned and could be declared final
8765	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	38	Parameter 'timeSettings' is not assigned and could be declared final
8766	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	46	Overridable method 'produceModel' called during object construction
8767	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	54	System.out.print is used
8768	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	58	Local variable 'out1' could be declared final
8769	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	64	Local variable 'fstream' could be declared final
8770	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	69	Local variable 'out' could be declared final
8771	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	75	System.out.print is used
8772	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	87	System.out.print is used
8773	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	110	Avoid unused private methods such as 'performance()'.
8774	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	114	The String literal "}\n" appears 17 times in this file; the first occurrence is on line 113
8775	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	120	The String literal "}{\n" appears 4 times in this file; the first occurrence is on line 119
8776	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	123	The String literal "\t}\n" appears 4 times in this file; the first occurrence is on line 122
8777	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	130	Local variable 'arcsTo' could be declared final
8778	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	131	Found 'DD'-anomaly for variable 'taggedArc' (lines '130'-'134').
8779	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	133	Avoid using while statements without curly braces
8780	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	134	Avoid using if statements without curly braces
8781	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	135	Found 'DD'-anomaly for variable 'taggedArc' (lines '134'-'134').
8782	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	138	Avoid using if statements without curly braces
8783	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	144	Avoid variables with short names like i
8784	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	144	Parameter 'clone' is not assigned and could be declared final
8785	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	146	Avoid variables with short names like id
8786	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	147	Avoid using if statements without curly braces
8787	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	147	Prefer StringBuffer over += for concatenating strings
8788	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	174	Avoid using if statements without curly braces
8789	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	179	Avoid using if statements without curly braces
8790	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	194	The String literal " = " appears 4 times in this file; the first occurrence is on line 193
8791	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	205	Found 'DD'-anomaly for variable 'taggedArc' (lines '204'-'215').
8792	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	206	Found 'DD'-anomaly for variable 'numInputArc' (lines '205'-'216').
8793	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	207	Local variable 'arcsTo' could be declared final
8794	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	216	Found 'DD'-anomaly for variable 'taggedArc' (lines '215'-'215').
8795	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	217	Found 'DD'-anomaly for variable 'numInputArc' (lines '216'-'216').
8796	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	236	Avoid really long methods.
8797	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	236	Avoid variables with short names like i
8798	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	236	The method 'writeTransition' has a Cyclomatic Complexity of 40.
8799	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	236	The method writeTransition() has an NCSS line count of 136
8800	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	236	The method writeTransition() has an NPath complexity of 391680
8801	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	265	Avoid using implementation types like 'ArrayList'; use the interface instead
8802	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	265	Avoid using implementation types like 'ArrayList'; use the interface instead
8803	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	265	The method 'stateGroups' has a Cyclomatic Complexity of 12.
8804	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	265	The method stateGroups() has an NPath complexity of 209
8805	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	269	Found 'DD'-anomaly for variable 'tag_count' (lines '682'-'689').
8806	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	272	Found 'DU'-anomaly for variable 'first_con' (lines '685'-'736').
8807	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	273	Avoid unused local variables such as 'and_con'.
8808	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	273	Found 'DD'-anomaly for variable 'and_con' (lines '686'-'686').
8809	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	273	Found 'DU'-anomaly for variable 'and_con' (lines '686'-'736').
8810	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	275	Avoid instantiating new objects inside loops
8811	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	275	Found 'DD'-anomaly for variable 'tag' (lines '688'-'697').
8812	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	284	Found 'DD'-anomaly for variable 'tag' (lines '697'-'705').
8813	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	284	Found 'DU'-anomaly for variable 'tag' (lines '697'-'736').
8814	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	290	Avoid using for statements without curly braces
8815	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	292	Found 'DD'-anomaly for variable 'tag' (lines '705'-'705').
8816	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	292	Found 'DU'-anomaly for variable 'tag' (lines '705'-'736').
8817	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	299	Found 'DU'-anomaly for variable 'first_con' (lines '712'-'736').
8818	src/pipe/modules/passageTimeForTaggedNet/TransModel.java	321	Found 'DU'-anomaly for variable 'groupCount' (lines '734'-'736').
8819	src/pipe/modules/queryeditor/QueryManager.java	12	A high number of imports can indicate a high degree of coupling within an object.
8820	src/pipe/modules/queryeditor/QueryManager.java	67	The class 'QueryManager' has a Cyclomatic Complexity of 2 (Highest = 23).
8821	src/pipe/modules/queryeditor/QueryManager.java	67	This class has too many methods, consider refactoring it.
8822	src/pipe/modules/queryeditor/QueryManager.java	71	Variables that are final and static should be in all caps.
8823	src/pipe/modules/queryeditor/QueryManager.java	72	Variables that are final and static should be in all caps.
8824	src/pipe/modules/queryeditor/QueryManager.java	73	Variables that are final and static should be in all caps.
8825	src/pipe/modules/queryeditor/QueryManager.java	74	Variables that are final and static should be in all caps.
8826	src/pipe/modules/queryeditor/QueryManager.java	75	Variables that are final and static should be in all caps.
8827	src/pipe/modules/queryeditor/QueryManager.java	81	Avoid using implementation types like 'ArrayList'; use the interface instead
8828	src/pipe/modules/queryeditor/QueryManager.java	81	Avoid using implementation types like 'ArrayList'; use the interface instead
8829	src/pipe/modules/queryeditor/QueryManager.java	82	Avoid unused private fields such as 'tabIndex'.
8830	src/pipe/modules/queryeditor/QueryManager.java	83	Found non-transient, non-static member. Please mark as transient or provide accessors.
8831	src/pipe/modules/queryeditor/QueryManager.java	94	Avoid excessively long variable names like availableTextColours
8832	src/pipe/modules/queryeditor/QueryManager.java	102	Avoid excessively long variable names like allowDeletionOfArcs
8833	src/pipe/modules/queryeditor/QueryManager.java	108	Avoid really long methods.
8834	src/pipe/modules/queryeditor/QueryManager.java	108	Parameter 'pnmlData' is not assigned and could be declared final
8835	src/pipe/modules/queryeditor/QueryManager.java	109	Avoid if (x != y) ..; else ..;
8836	src/pipe/modules/queryeditor/QueryManager.java	119	Assigning an Object to null is a code smell. Consider refactoring.
8837	src/pipe/modules/queryeditor/QueryManager.java	120	The String literal "file.separator" appears 5 times in this file; the first occurrence is on line 120
8838	src/pipe/modules/queryeditor/QueryManager.java	132	Local variable 'infoPane' could be declared final
8839	src/pipe/modules/queryeditor/QueryManager.java	133	Local variable 'infoPaneHeight' could be declared final
8840	src/pipe/modules/queryeditor/QueryManager.java	134	Local variable 'infoPaneMinSize' could be declared final
8841	src/pipe/modules/queryeditor/QueryManager.java	135	Local variable 'infoPanePrefSize' could be declared final
8842	src/pipe/modules/queryeditor/QueryManager.java	141	Local variable 'queryButtonsPane' could be declared final
8843	src/pipe/modules/queryeditor/QueryManager.java	144	Avoid excessively long variable names like queryBuilderToolbars
8844	src/pipe/modules/queryeditor/QueryManager.java	151	Avoid excessively long variable names like queryBuilderPaneMinSize
8845	src/pipe/modules/queryeditor/QueryManager.java	152	Avoid excessively long variable names like queryBuilderPanePrefSize
8846	src/pipe/modules/queryeditor/QueryManager.java	196	Avoid variables with short names like e
8847	src/pipe/modules/queryeditor/QueryManager.java	196	Parameter 'e' is not assigned and could be declared final
8848	src/pipe/modules/queryeditor/QueryManager.java	235	Parameter 'index' is not assigned and could be declared final
8849	src/pipe/modules/queryeditor/QueryManager.java	236	Avoid using if statements without curly braces
8850	src/pipe/modules/queryeditor/QueryManager.java	237	A method should have only one exit point, and that should be the last statement in the method
8851	src/pipe/modules/queryeditor/QueryManager.java	239	Avoid using if statements without curly braces
8852	src/pipe/modules/queryeditor/QueryManager.java	248	Parameter 'index' is not assigned and could be declared final
8853	src/pipe/modules/queryeditor/QueryManager.java	249	Avoid using if statements without curly braces
8854	src/pipe/modules/queryeditor/QueryManager.java	250	A method should have only one exit point, and that should be the last statement in the method
8855	src/pipe/modules/queryeditor/QueryManager.java	252	Avoid using if statements without curly braces
8856	src/pipe/modules/queryeditor/QueryManager.java	259	Consider simply returning the value vs storing it in local variable 'tab'
8857	src/pipe/modules/queryeditor/QueryManager.java	262	Parameter 'fileNo' is not assigned and could be declared final
8858	src/pipe/modules/queryeditor/QueryManager.java	263	Avoid using if statements without curly braces
8859	src/pipe/modules/queryeditor/QueryManager.java	305	Avoid if (x != y) ..; else ..;
8860	src/pipe/modules/queryeditor/QueryManager.java	306	A method should have only one exit point, and that should be the last statement in the method
8861	src/pipe/modules/queryeditor/QueryManager.java	309	Avoid using if...else statements without curly braces
8862	src/pipe/modules/queryeditor/QueryManager.java	338	Avoid using if...else statements without curly braces
8863	src/pipe/modules/queryeditor/QueryManager.java	363	Avoid using if...else statements without curly braces
8864	src/pipe/modules/queryeditor/QueryManager.java	365	Avoid using if...else statements without curly braces
8865	src/pipe/modules/queryeditor/QueryManager.java	371	Avoid using if...else statements without curly braces
8866	src/pipe/modules/queryeditor/QueryManager.java	391	Position literals first in String comparisons
8867	src/pipe/modules/queryeditor/QueryManager.java	402	Position literals first in String comparisons
8868	src/pipe/modules/queryeditor/QueryManager.java	439	Avoid really long methods.
8869	src/pipe/modules/queryeditor/QueryManager.java	439	The method 'queryTreeValid' has a Cyclomatic Complexity of 23.
8870	src/pipe/modules/queryeditor/QueryManager.java	439	The method queryTreeValid() has an NPath complexity of 276
8871	src/pipe/modules/queryeditor/QueryManager.java	444	Use asList instead of tight loops
8872	src/pipe/modules/queryeditor/QueryManager.java	450	Avoid variables with short names like i
8873	src/pipe/modules/queryeditor/QueryManager.java	455	These nested if statements could be combined
8874	src/pipe/modules/queryeditor/QueryManager.java	467	Avoid variables with short names like j
8875	src/pipe/modules/queryeditor/QueryManager.java	481	Position literals first in String comparisons
8876	src/pipe/modules/queryeditor/QueryManager.java	493	Position literals first in String comparisons
8877	src/pipe/modules/queryeditor/QueryManager.java	525	These nested if statements could be combined
8878	src/pipe/modules/queryeditor/QueryManager.java	532	A method should have only one exit point, and that should be the last statement in the method
8879	src/pipe/modules/queryeditor/QueryManager.java	548	Assigning an Object to null is a code smell. Consider refactoring.
8880	src/pipe/modules/queryeditor/QueryManager.java	577	Found 'DD'-anomaly for variable 'enablePopup' (lines '577'-'580').
8881	src/pipe/modules/queryeditor/QueryManager.java	577	Found 'DD'-anomaly for variable 'enablePopup' (lines '577'-'582').
8882	src/pipe/modules/queryeditor/QueryManager.java	580	Found 'DU'-anomaly for variable 'enablePopup' (lines '580'-'590').
8883	src/pipe/modules/queryeditor/QueryManager.java	582	Found 'DU'-anomaly for variable 'enablePopup' (lines '582'-'590').
8884	src/pipe/modules/queryeditor/QueryManager.java	584	This statement may have some unnecessary parentheses
8885	src/pipe/modules/queryeditor/QueryManager.java	584	This statement may have some unnecessary parentheses
8886	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	24	To be compliant to J2EE, a webapp should not use any thread.
8887	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
8888	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
8889	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
8890	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
8891	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	32	Use explicit scoping instead of the default package private level
8892	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
8893	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	34	Use explicit scoping instead of the default package private level
8894	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	37	Avoid variables with short names like r
8895	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	65	Avoid variables with short names like o
8896	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	66	Avoid assignments in operands
8897	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	66	Found 'DU'-anomaly for variable 'o' (lines '66'-'100').
8898	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	70	Avoid variables with short names like w
8899	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	93	Avoid using if...else statements without curly braces
8900	src/pipe/modules/queryeditor/evaluator/AnalysisResultsReceiver.java	113	The String literal "Results reciever Thread Exiting..." appears 4 times in this file; the first occurrence is on line 113
8901	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	33	The class 'AnalysisStatusUpdater' has a Cyclomatic Complexity of 4 (Highest = 17).
8902	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	33	To be compliant to J2EE, a webapp should not use any thread.
8903	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
8904	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
8905	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
8906	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	40	Avoid variables with short names like in
8907	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8908	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8909	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	92	The method 'run' has a Cyclomatic Complexity of 17.
8910	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	95	Found 'DD'-anomaly for variable 'status' (lines '95'-'106').
8911	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	96	Found 'DU'-anomaly for variable 'firstTimeWaiting' (lines '96'-'181').
8912	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	106	Avoid assignments in operands
8913	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	106	Found 'DD'-anomaly for variable 'status' (lines '106'-'106').
8914	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	126	Found 'DU'-anomaly for variable 'firstTimeWaiting' (lines '126'-'181').
8915	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	141	Assigning an Object to null is a code smell. Consider refactoring.
8916	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	142	Assigning an Object to null is a code smell. Consider refactoring.
8917	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	143	Avoid if (x != y) ..; else ..;
8918	src/pipe/modules/queryeditor/evaluator/AnalysisStatusUpdater.java	145	Avoid instantiating new objects inside loops
8919	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	38	To be compliant to J2EE, a webapp should not use any thread.
8920	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8921	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	41	Avoid excessively long variable names like analysisListenerPort
8922	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8923	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8924	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
8925	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
8926	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	49	Avoid excessively long variable names like serverListenerThread
8927	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	49	To be compliant to J2EE, a webapp should not use any thread.
8928	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	91	Document empty method
8929	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	104	Use block level rather than method level synchronization
8930	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	142	Avoid variables with short names like t
8931	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	142	To be compliant to J2EE, a webapp should not use any thread.
8932	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	142	To be compliant to J2EE, a webapp should not use any thread.
8933	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	160	Avoid using final local variables, turn them into fields
8934	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	165	Avoid using final local variables, turn them into fields
8935	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	170	Avoid using final local variables, turn them into fields
8936	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	199	Avoid variables with short names like i
8937	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	204	Avoid instantiating new objects inside loops
8938	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	227	Use block level rather than method level synchronization
8939	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	231	To be compliant to J2EE, a webapp should not use any thread.
8940	src/pipe/modules/queryeditor/evaluator/AnalysisThread.java	238	Avoid variables with short names like w
8941	src/pipe/modules/queryeditor/evaluator/CommunicatorStarter.java	14	Avoid modifiers which are implied by the context
8942	src/pipe/modules/queryeditor/evaluator/CommunicatorStarter.java	16	Avoid modifiers which are implied by the context
8943	src/pipe/modules/queryeditor/evaluator/EditQueryTreeNodeAction.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8944	src/pipe/modules/queryeditor/evaluator/EditQueryTreeNodeAction.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
8945	src/pipe/modules/queryeditor/evaluator/EditQueryTreeNodeAction.java	27	It is a good practice to call super() in a constructor
8946	src/pipe/modules/queryeditor/evaluator/EditQueryTreeNodeAction.java	32	Avoid variables with short names like e
8947	src/pipe/modules/queryeditor/evaluator/EvaluatorLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
8948	src/pipe/modules/queryeditor/evaluator/EvaluatorLoggingHandler.java	14	Avoid modifiers which are implied by the context
8949	src/pipe/modules/queryeditor/evaluator/EvaluatorLoggingHandler.java	14	Variables that are final and static should be in all caps.
8950	src/pipe/modules/queryeditor/evaluator/EvaluatorLoggingHandler.java	15	Avoid modifiers which are implied by the context
8951	src/pipe/modules/queryeditor/evaluator/EvaluatorLoggingHandler.java	15	Variables that are final and static should be in all caps.
8952	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
8953	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8954	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
8955	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	27	Avoid variables with short names like in
8956	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
8957	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
8958	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	35	Assigning an Object to null is a code smell. Consider refactoring.
8959	src/pipe/modules/queryeditor/evaluator/InterruptableSocketIO.java	54	Document empty method
8960	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	22	To be compliant to J2EE, a webapp should not use any thread.
8961	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8962	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
8963	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
8964	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	29	Avoid variables with short names like in
8965	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
8966	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	29	Perhaps 'in' could be replaced by a local variable.
8967	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
8968	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	32	It is a good practice to call super() in a constructor
8969	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	93	Avoid assignments in operands
8970	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	93	Found 'DU'-anomaly for variable 'line' (lines '93'-'115').
8971	src/pipe/modules/queryeditor/evaluator/LoggingListener.java	95	System.out.print is used
8972	src/pipe/modules/queryeditor/evaluator/NodeStatusUpdater.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
8973	src/pipe/modules/queryeditor/evaluator/NodeStatusUpdater.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
8974	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
8975	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	31	Avoid variables with short names like id
8976	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
8977	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
8978	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
8979	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	40	Avoid using implementation types like 'HashMap'; use the interface instead
8980	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	40	Avoid using implementation types like 'HashMap'; use the interface instead
8981	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
8982	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	59	Overridable method 'setParent' called during object construction
8983	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	80	These nested if statements could be combined
8984	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	92	Found 'DD'-anomaly for variable 'simpleNode' (lines '92'-'103').
8985	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	92	Found 'DD'-anomaly for variable 'simpleNode' (lines '92'-'95').
8986	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	126	Avoid variables with short names like i
8987	src/pipe/modules/queryeditor/evaluator/PerformanceTreeNodeWrapper.java	150	Avoid if (x != y) ..; else ..;
8988	src/pipe/modules/queryeditor/evaluator/QueryEvaluator.java	19	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
8989	src/pipe/modules/queryeditor/evaluator/QueryEvaluator.java	34	To be compliant to J2EE, a webapp should not use any thread.
8990	src/pipe/modules/queryeditor/evaluator/QueryEvaluator.java	34	To be compliant to J2EE, a webapp should not use any thread.
8991	src/pipe/modules/queryeditor/evaluator/QueryEvaluator.java	68	Avoid variables with short names like p
8992	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	31	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
8993	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	34	Avoid excessively long variable names like serverSettingsPanel
8994	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	35	Avoid excessively long variable names like analysisSettingsPanel
8995	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	43	Assigning an Object to null is a code smell. Consider refactoring.
8996	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	48	Found 'DU'-anomaly for variable 'serverAddress' (lines '48'-'96').
8997	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	49	Found 'DU'-anomaly for variable 'serverPort' (lines '49'-'96').
8998	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	50	Found 'DU'-anomaly for variable 'clearCache' (lines '50'-'96').
8999	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	51	Found 'DU'-anomaly for variable 'autoTimeRange' (lines '51'-'96').
9000	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	53	Avoid excessively long variable names like serverLoggingLevel
9001	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	53	Found 'DU'-anomaly for variable 'serverLoggingLevel' (lines '53'-'96').
9002	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	54	Avoid excessively long variable names like clientLoggingLevel
9003	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	54	Found 'DU'-anomaly for variable 'clientLoggingLevel' (lines '54'-'96').
9004	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	56	Found 'DU'-anomaly for variable 'numProcessors' (lines '56'-'96').
9005	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	60	Found 'DU'-anomaly for variable 'method' (lines '60'-'96').
9006	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	64	Unnecessary wrapper object creation
9007	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	65	Unnecessary wrapper object creation
9008	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	80	A method should have only one exit point, and that should be the last statement in the method
9009	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	88	A method should have only one exit point, and that should be the last statement in the method
9010	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	130	Parameter 'arg0' is not assigned and could be declared final
9011	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	148	Assigning an Object to null is a code smell. Consider refactoring.
9012	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	149	Assigning an Object to null is a code smell. Consider refactoring.
9013	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	150	Assigning an Object to null is a code smell. Consider refactoring.
9014	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	151	Assigning an Object to null is a code smell. Consider refactoring.
9015	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	159	Avoid excessively long variable names like defaultServerAddress
9016	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	161	Avoid using final local variables, turn them into fields
9017	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	162	Avoid using final local variables, turn them into fields
9018	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	168	Avoid using final local variables, turn them into fields
9019	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	169	Avoid using final local variables, turn them into fields
9020	src/pipe/modules/queryeditor/evaluator/SettingsManager.java	170	Avoid using final local variables, turn them into fields
9021	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
9022	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	14	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9023	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
9024	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	15	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9025	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
9026	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
9027	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
9028	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	41	Avoid variables with short names like c
9029	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	41	Avoid variables with short names like g
9030	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	41	Avoid variables with short names like x
9031	src/pipe/modules/queryeditor/evaluator/gui/CloseTabIcon.java	41	Avoid variables with short names like y
9032	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
9033	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
9034	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
9035	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
9036	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
9037	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	35	Avoid excessively long variable names like clientLoggingLevelBox
9038	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	35	Avoid excessively long variable names like serverLoggingLevelBox
9039	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	41	Avoid excessively long variable names like analysisSettingsPanel
9040	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	42	This statement may have some unnecessary parentheses
9041	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	104	Avoid excessively long variable names like extractedStartTime
9042	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	108	Avoid excessively long variable names like extractedAutoTimeRange
9043	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsPanel.java	144	Avoid variables with short names like e
9044	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
9045	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	17	Perhaps 'serverPanel' could be replaced by a local variable.
9046	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	17	Private field 'serverPanel' could be made final; it is only initialized in the declaration or constructor.
9047	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
9048	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	20	Parameter 'parent' is not assigned and could be declared final
9049	src/pipe/modules/queryeditor/evaluator/gui/EvaluationSettingsServerPanel.java	27	Avoid excessively long variable names like noOfProcessorsExtracted
9050	src/pipe/modules/queryeditor/evaluator/gui/EvaluatorGuiLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
9051	src/pipe/modules/queryeditor/evaluator/gui/EvaluatorGuiLoggingHandler.java	14	Avoid modifiers which are implied by the context
9052	src/pipe/modules/queryeditor/evaluator/gui/EvaluatorGuiLoggingHandler.java	14	Variables that are final and static should be in all caps.
9053	src/pipe/modules/queryeditor/evaluator/gui/EvaluatorGuiLoggingHandler.java	15	Avoid modifiers which are implied by the context
9054	src/pipe/modules/queryeditor/evaluator/gui/EvaluatorGuiLoggingHandler.java	15	Variables that are final and static should be in all caps.
9055	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	43	The class 'ProgressView' has a Cyclomatic Complexity of 4 (Highest = 19).
9056	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
9057	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	47	Perhaps 'queryData' could be replaced by a local variable.
9058	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	48	Avoid using implementation types like 'ArrayList'; use the interface instead
9059	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	48	Avoid using implementation types like 'ArrayList'; use the interface instead
9060	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
9061	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
9062	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	51	It is a good practice to call super() in a constructor
9063	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	61	The method 'add' has a Cyclomatic Complexity of 11.
9064	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	97	A method should have only one exit point, and that should be the last statement in the method
9065	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	108	A method should have only one exit point, and that should be the last statement in the method
9066	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	116	A method should have only one exit point, and that should be the last statement in the method
9067	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	122	A method should have only one exit point, and that should be the last statement in the method
9068	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	130	A method should have only one exit point, and that should be the last statement in the method
9069	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	135	Avoid excessively long variable names like progressViewPanelSize
9070	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	135	Avoid really long methods.
9071	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	135	The method 'drawQueryTree' has a Cyclomatic Complexity of 19.
9072	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	135	The method drawQueryTree() has an NPath complexity of 4662
9073	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	152	Avoid excessively long variable names like boundingBoxInitialised
9074	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	158	Avoid variables with short names like i
9075	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	165	Avoid if (x != y) ..; else ..;
9076	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	176	Found 'DU'-anomaly for variable 'boundingBoxInitialised' (lines '176'-'262').
9077	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	221	Found 'DU'-anomaly for variable 'displacementX' (lines '221'-'262').
9078	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	222	Found 'DU'-anomaly for variable 'displacementY' (lines '222'-'262').
9079	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	316	Overriding method merely calls super
9080	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	322	Avoid variables with short names like w
9081	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	324	Avoid variables with short names like n
9082	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	324	Found 'DD'-anomaly for variable 'n' (lines '324'-'330').
9083	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	324	Found 'DU'-anomaly for variable 'n' (lines '324'-'340').
9084	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	361	Found 'DD'-anomaly for variable 'node' (lines '361'-'364').
9085	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	387	Avoid variables with short names like d
9086	src/pipe/modules/queryeditor/evaluator/gui/ProgressView.java	388	Avoid variables with short names like x
9087	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	11	A high number of imports can indicate a high degree of coupling within an object.
9088	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	53	Too many fields
9089	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	54	This class has too many methods, consider refactoring it.
9090	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	58	Found non-transient, non-static member. Please mark as transient or provide accessors.
9091	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
9092	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	60	Avoid excessively long variable names like allowChangeProgressBar
9093	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
9094	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
9095	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
9096	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	73	Found 'DU'-anomaly for variable 'finishedTail' (lines '73'-'111').
9097	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	73	Local variable 'finishedTail' could be declared final
9098	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	78	Prefer StringBuffer over += for concatenating strings
9099	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	85	Prefer StringBuffer over += for concatenating strings
9100	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	92	Prefer StringBuffer over += for concatenating strings
9101	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	127	Avoid empty if statements
9102	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	150	Avoid variables with short names like e
9103	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	159	Avoid variables with short names like ok
9104	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	159	This final field could be made static
9105	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	159	This final field could be made static
9106	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	163	Use explicit scoping instead of the default package private level
9107	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	164	Avoid excessively long variable names like progressWindowPanel
9108	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	164	Perhaps 'progressWindowPanel' could be replaced by a local variable.
9109	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	165	Perhaps 'scrollPane' could be replaced by a local variable.
9110	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	169	Avoid excessively long variable names like tabPanelPreferredSize
9111	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	169	Avoid excessively long variable names like viewPanelPreferredSize
9112	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	171	Avoid excessively long variable names like paintWhileScrolling
9113	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	173	Use of modifier volatile is not recommended.
9114	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	176	Avoid using implementation types like 'HashMap'; use the interface instead
9115	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	176	Avoid using implementation types like 'HashMap'; use the interface instead
9116	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	178	Consider replacing this Hashtable with the newer java.util.Map
9117	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	180	Consider replacing this Hashtable with the newer java.util.Map
9118	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	182	Use explicit scoping instead of the default package private level
9119	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	184	Parameter 'event' is not assigned and could be declared final
9120	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	195	Avoid variables with short names like e
9121	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	203	Avoid variables with short names like e
9122	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	262	Avoid variables with short names like c
9123	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	262	Use block level rather than method level synchronization
9124	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	290	Assigning an Object to null is a code smell. Consider refactoring.
9125	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	322	Document empty method
9126	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	470	Document empty method
9127	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	474	Document empty method
9128	src/pipe/modules/queryeditor/evaluator/gui/ProgressWindow.java	493	Use block level rather than method level synchronization
9129	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
9130	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	28	Use explicit scoping instead of the default package private level
9131	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	33	Overridable method 'setOperation' called during object construction
9132	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	56	A method should have only one exit point, and that should be the last statement in the method
9133	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	73	Position literals first in String comparisons
9134	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	75	Prefer StringBuffer over += for concatenating strings
9135	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	77	Prefer StringBuffer over += for concatenating strings
9136	src/pipe/modules/queryeditor/evaluator/gui/QueryOperationNode.java	86	Use block level rather than method level synchronization
9137	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	20	Abstract classes should be named AbstractXXX
9138	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	52	An empty method in an abstract class should be abstract instead
9139	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	63	Avoid variables with short names like x
9140	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	63	Avoid variables with short names like y
9141	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	77	An empty method in an abstract class should be abstract instead
9142	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	84	An empty method in an abstract class should be abstract instead
9143	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNode.java	85	Document empty method
9144	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	17	The class 'QueryTreeNodeHandler' has a Cyclomatic Complexity of 7 (Highest = 15).
9145	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
9146	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
9147	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	26	It is a good practice to call super() in a constructor
9148	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	31	The method 'getComponentForLeftClick' has a Cyclomatic Complexity of 15.
9149	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	104	Avoid variables with short names like e
9150	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	108	A switch with less than 3 branches is inefficient, use a if statement instead.
9151	src/pipe/modules/queryeditor/evaluator/gui/QueryTreeNodeHandler.java	108	Switch statements should have a default label
9152	src/pipe/modules/queryeditor/evaluator/gui/QueryValueNode.java	19	Avoid variables with short names like n
9153	src/pipe/modules/queryeditor/evaluator/gui/QueryValueNode.java	19	Parameter 'n' is not assigned and could be declared final
9154	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	4	A high number of imports can indicate a high degree of coupling within an object.
9155	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
9156	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
9157	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	51	Parameter 'arg0' is not assigned and could be declared final
9158	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	58	Found 'DU'-anomaly for variable 'size' (lines '58'-'104').
9159	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	58	Local variable 'size' could be declared final
9160	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	60	Avoid variables with short names like fw
9161	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	60	Found 'DD'-anomaly for variable 'fw' (lines '60'-'79').
9162	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	60	Found 'DU'-anomaly for variable 'fw' (lines '60'-'104').
9163	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	61	Found 'DU'-anomaly for variable 'content' (lines '61'-'104').
9164	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	61	Local variable 'content' could be declared final
9165	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	65	Avoid variables with short names like fc
9166	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	65	Local variable 'fc' could be declared final
9167	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	67	Local variable 'returnVal' could be declared final
9168	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	84	Avoid appending characters as strings in StringBuffer.append.
9169	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	88	Local variable 'content1' could be declared final
9170	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	107	Found non-transient, non-static member. Please mark as transient or provide accessors.
9171	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	109	Parameter 'eve' is not assigned and could be declared final
9172	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	114	Found 'DU'-anomaly for variable 'graphImage' (lines '114'-'136').
9173	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	118	Avoid variables with short names like fc
9174	src/pipe/modules/queryeditor/evaluator/gui/ResultBarChartPlotter.java	148	Avoid variables with short names like w
9175	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	4	A high number of imports can indicate a high degree of coupling within an object.
9176	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
9177	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
9178	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
9179	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	65	Parameter 'arg0' is not assigned and could be declared final
9180	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	72	Found 'DU'-anomaly for variable 'size' (lines '72'-'115').
9181	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	72	Local variable 'size' could be declared final
9182	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	74	Avoid variables with short names like fw
9183	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	74	Found 'DD'-anomaly for variable 'fw' (lines '74'-'90').
9184	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	74	Found 'DU'-anomaly for variable 'fw' (lines '74'-'115').
9185	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	75	Found 'DU'-anomaly for variable 'content' (lines '75'-'115').
9186	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	75	Local variable 'content' could be declared final
9187	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	79	Avoid variables with short names like fc
9188	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	79	Local variable 'fc' could be declared final
9189	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	81	Local variable 'returnVal' could be declared final
9190	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	86	Avoid using if...else statements without curly braces
9191	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	95	Avoid appending characters as strings in StringBuffer.append.
9192	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	99	Local variable 'content1' could be declared final
9193	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	118	Found non-transient, non-static member. Please mark as transient or provide accessors.
9194	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	120	Parameter 'eve' is not assigned and could be declared final
9195	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	125	Found 'DU'-anomaly for variable 'graphImage' (lines '125'-'144').
9196	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	129	Avoid variables with short names like fc
9197	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	135	Avoid using if...else statements without curly braces
9198	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	156	Avoid variables with short names like w
9199	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	190	Avoid using if...else statements without curly braces
9200	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	193	Avoid variables with short names like w
9201	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	201	Found 'DD'-anomaly for variable 'plot' (lines '201'-'205').
9202	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	201	Found 'DD'-anomaly for variable 'plot' (lines '201'-'209').
9203	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	201	Found 'DD'-anomaly for variable 'plot' (lines '201'-'213').
9204	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	240	Avoid using final local variables, turn them into fields
9205	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	290	No need to call String.valueOf to append to a string.
9206	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	334	Found 'DD'-anomaly for variable 'polyPoints' (lines '334'-'338').
9207	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	335	Found 'DU'-anomaly for variable 'counter' (lines '335'-'362').
9208	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	338	Found 'DD'-anomaly for variable 'polyPoints' (lines '338'-'338').
9209	src/pipe/modules/queryeditor/evaluator/gui/ResultGraphPlotter.java	351	No need to call String.valueOf to append to a string.
9210	src/pipe/modules/queryeditor/evaluator/gui/ResultPlotter.java	26	Abstract classes should be named AbstractXXX
9211	src/pipe/modules/queryeditor/evaluator/gui/ResultPlotter.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
9212	src/pipe/modules/queryeditor/evaluator/gui/ResultPlotter.java	46	Avoid variables with short names like w
9213	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	29	The class 'ResultProvider' has a Cyclomatic Complexity of 5 (Highest = 12).
9214	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	30	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
9215	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	32	Variables that are final and static should be in all caps.
9216	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	33	Variables that are final and static should be in all caps.
9217	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	34	Variables that are final and static should be in all caps.
9218	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	35	Variables that are final and static should be in all caps.
9219	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	36	Variables that are final and static should be in all caps.
9220	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	39	Avoid excessively long variable names like ProbInIntervalTabName
9221	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	43	The method 'setupAutomaticResult' has a Cyclomatic Complexity of 10.
9222	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	89	Avoid variables with short names like w
9223	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	129	The String literal "View Text File" appears 5 times in this file; the first occurrence is on line 129
9224	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	151	Found 'DD'-anomaly for variable 'area' (lines '151'-'171').
9225	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	151	Found 'DD'-anomaly for variable 'area' (lines '151'-'176').
9226	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	151	Found 'DU'-anomaly for variable 'area' (lines '151'-'184').
9227	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	152	Found 'DD'-anomaly for variable 'name' (lines '152'-'157').
9228	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	152	Found 'DD'-anomaly for variable 'name' (lines '152'-'161').
9229	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	152	Found 'DU'-anomaly for variable 'name' (lines '152'-'184').
9230	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	168	Avoid if (x != y) ..; else ..;
9231	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	225	Avoid variables with short names like w
9232	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	317	The method 'setupResult' has a Cyclomatic Complexity of 12.
9233	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	426	Found 'DD'-anomaly for variable 'area' (lines '426'-'433').
9234	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	426	Found 'DD'-anomaly for variable 'area' (lines '426'-'438').
9235	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	430	Avoid if (x != y) ..; else ..;
9236	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	457	Found 'DD'-anomaly for variable 'area' (lines '457'-'464').
9237	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	457	Found 'DD'-anomaly for variable 'area' (lines '457'-'469').
9238	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	457	Found 'DD'-anomaly for variable 'area' (lines '457'-'475').
9239	src/pipe/modules/queryeditor/evaluator/gui/ResultProvider.java	459	Avoid if (x != y) ..; else ..;
9240	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
9241	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
9242	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
9243	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
9244	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
9245	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	52	Use explicit scoping instead of the default package private level
9246	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	54	Parameter 'event' is not assigned and could be declared final
9247	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	58	Avoid idempotent operations (like assigning a variable to itself).
9248	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	63	Local variable 'selectedItem' could be declared final
9249	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	71	Use explicit scoping instead of the default package private level
9250	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	73	Parameter 'event' is not assigned and could be declared final
9251	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	81	Found 'DD'-anomaly for variable 'servAdd' (lines '81'-'84').
9252	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	88	Avoid if (x != y) ..; else ..;
9253	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	94	Local variable 'serverDislayName' could be declared final
9254	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	121	Parameter 'parent' is not assigned and could be declared final
9255	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	124	Avoid excessively long variable names like extractedServerAddress
9256	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	125	Avoid excessively long variable names like extractedServerPort
9257	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	126	Avoid excessively long variable names like extractedServerEntry
9258	src/pipe/modules/queryeditor/evaluator/gui/ServerSettingsBasicPanel.java	130	This statement may have some unnecessary parentheses
9259	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	14	The class 'StatusIndicator' has a Cyclomatic Complexity of 3 (Highest = 10).
9260	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
9261	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
9262	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
9263	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
9264	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	33	Avoid excessively long variable names like currentFlashingStatus
9265	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
9266	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	42	Overridable method 'setStatus' called during object construction
9267	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	45	Overridable method 'setPosition' called during object construction
9268	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	49	Overridable method 'setPosition' called during object construction
9269	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	74	Avoid variables with short names like x
9270	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	74	Avoid variables with short names like y
9271	src/pipe/modules/queryeditor/evaluator/gui/StatusIndicator.java	100	The method 'setStatusImage' has a Cyclomatic Complexity of 10.
9272	src/pipe/modules/queryeditor/evaluator/gui/TabOpenAction.java	12	Abstract classes should be named AbstractXXX
9273	src/pipe/modules/queryeditor/evaluator/gui/TabOpenAction.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
9274	src/pipe/modules/queryeditor/evaluator/gui/TabOpenAction.java	15	Use explicit scoping instead of the default package private level
9275	src/pipe/modules/queryeditor/evaluator/gui/TabOpenAction.java	17	It is a good practice to call super() in a constructor
9276	src/pipe/modules/queryeditor/gui/ButtonBar.java	23	Parameter 'actions' is not assigned and could be declared final
9277	src/pipe/modules/queryeditor/gui/ButtonBar.java	23	Parameter 'captions' is not assigned and could be declared final
9278	src/pipe/modules/queryeditor/gui/ButtonBar.java	27	Avoid instantiating new objects inside loops
9279	src/pipe/modules/queryeditor/gui/ButtonBar.java	27	Avoid variables with short names like b
9280	src/pipe/modules/queryeditor/gui/ButtonBar.java	27	Local variable 'b' could be declared final
9281	src/pipe/modules/queryeditor/gui/ButtonBar.java	31	Avoid variables with short names like d
9282	src/pipe/modules/queryeditor/gui/ButtonBar.java	31	Local variable 'd' could be declared final
9283	src/pipe/modules/queryeditor/gui/ButtonBar.java	36	Parameter 'action' is not assigned and could be declared final
9284	src/pipe/modules/queryeditor/gui/ButtonBar.java	36	Parameter 'caption' is not assigned and could be declared final
9285	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
9286	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	28	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
9287	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	30	It is a good practice to call super() in a constructor
9288	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	30	Parameter 'component' is not assigned and could be declared final
9289	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	40	Avoid variables with short names like e
9290	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	40	Parameter 'e' is not assigned and could be declared final
9291	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	43	Local variable 'msg' could be declared final
9292	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	47	Local variable 'msg' could be declared final
9293	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	68	Local variable 'node' could be declared final
9294	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	69	Avoid if (x != y) ..; else ..;
9295	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	70	Local variable 'incomingArc' could be declared final
9296	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	71	Local variable 'parentNode' could be declared final
9297	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	77	A method should have only one exit point, and that should be the last statement in the method
9298	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	80	A method should have only one exit point, and that should be the last statement in the method
9299	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	80	Avoid using if...else statements without curly braces
9300	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	83	Avoid using if...else statements without curly braces
9301	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	93	Parameter 'node' is not assigned and could be declared final
9302	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	97	Avoid variables with short names like i
9303	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	98	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '98'-'102').
9304	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	101	Avoid using if statements without curly braces
9305	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	102	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '102'-'102').
9306	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	104	Avoid unnecessary if..then..else statements when returning a boolean
9307	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	105	A method should have only one exit point, and that should be the last statement in the method
9308	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	105	Avoid using if...else statements without curly braces
9309	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	107	A method should have only one exit point, and that should be the last statement in the method
9310	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	107	Avoid using if...else statements without curly braces
9311	src/pipe/modules/queryeditor/gui/DeletePerformanceTreeObjectAction.java	109	Avoid using if...else statements without curly braces
9312	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	40	The class 'EditPerformanceTreeNodeAction' has a Cyclomatic Complexity of 19 (Highest = 67).
9313	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
9314	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
9315	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
9316	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	47	Avoid excessively long variable names like previousStateFuncString
9317	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
9318	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	49	It is a good practice to call super() in a constructor
9319	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	57	Avoid variables with short names like e
9320	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	62	Avoid really long methods.
9321	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	62	The method 'validateTree' has a Cyclomatic Complexity of 67.
9322	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	62	The method validateTree() has an NCSS line count of 173
9323	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	65	A high ratio of statements to labels in a switch statement. Consider refactoring.
9324	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	65	Switch statements should have a default label
9325	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	69	Avoid using if statements without curly braces
9326	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	85	Avoid using if statements without curly braces
9327	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	103	Avoid using if statements without curly braces
9328	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	126	Local variable 'input' could be declared final
9329	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	136	Found 'DD'-anomaly for variable 'momentCase' (lines '136'-'151').
9330	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	137	Found 'DU'-anomaly for variable 'numVal' (lines '137'-'495').
9331	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	137	Local variable 'numVal' could be declared final
9332	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	151	Found 'DU'-anomaly for variable 'momentCase' (lines '151'-'495').
9333	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	153	Avoid using if statements without curly braces
9334	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	163	Local variable 'nodeLabel' could be declared final
9335	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	177	Found 'DD'-anomaly for variable 'inputValid' (lines '177'-'243').
9336	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	179	Avoid using exceptions as flow control.
9337	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	183	The String literal "Invalid entry" appears 6 times in this file; the first occurrence is on line 183
9338	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	204	Local variable 'nodeLabel' could be declared final
9339	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	218	Found 'DD'-anomaly for variable 'inputValid' (lines '218'-'243').
9340	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	229	Local variable 'nodeLabel' could be declared final
9341	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	249	Avoid using if statements without curly braces
9342	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	263	Avoid using if...else statements without curly braces
9343	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	332	Avoid excessively long variable names like conditionStatement
9344	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	335	Avoid excessively long variable names like conditionExpression
9345	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	340	Avoid instantiating new objects inside loops
9346	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	341	Avoid instantiating new objects inside loops
9347	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	348	Avoid variables with short names like p1
9348	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	349	Avoid if (x != y) ..; else ..;
9349	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	499	Avoid excessively long variable names like decimalIsAnInteger
9350	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	499	Found 'DD'-anomaly for variable 'decimalIsAnInteger' (lines '499'-'514').
9351	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	500	Avoid excessively long variable names like stringRepresentation
9352	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	502	Position literals first in String comparisons
9353	src/pipe/modules/queryeditor/gui/EditPerformanceTreeNodeAction.java	504	String.indexOf(char) is faster than String.indexOf(String).
9354	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	28	Parameter 'contentpane' is not assigned and could be declared final
9355	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	28	Parameter 'obj' is not assigned and could be declared final
9356	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	36	Avoid variables with short names like e
9357	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	36	Parameter 'e' is not assigned and could be declared final
9358	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	39	Avoid using if...else statements without curly braces
9359	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	41	Avoid using if...else statements without curly braces
9360	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	42	Local variable 'menuItem' could be declared final
9361	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	49	Avoid variables with short names like e
9362	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	49	Parameter 'e' is not assigned and could be declared final
9363	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	54	Avoid using if statements without curly braces
9364	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	60	Avoid variables with short names like e
9365	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	60	Parameter 'e' is not assigned and could be declared final
9366	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	63	Avoid using if...else statements without curly braces
9367	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	65	Avoid using if...else statements without curly braces
9368	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	66	A switch with less than 3 branches is inefficient, use a if statement instead.
9369	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	66	Switch statements should have a default label
9370	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	68	Avoid using if statements without curly braces
9371	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	70	Local variable 'currentObject' could be declared final
9372	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	71	Local variable 'oldLocation' could be declared final
9373	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	73	Local variable 'transX' could be declared final
9374	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	74	Local variable 'transY' could be declared final
9375	src/pipe/modules/queryeditor/gui/PerformanceTreeArcHandler.java	76	Avoid using if...else statements without curly braces
9376	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	24	Parameter 'contentpane' is not assigned and could be declared final
9377	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	24	Parameter 'obj' is not assigned and could be declared final
9378	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	32	Avoid variables with short names like e
9379	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	32	Parameter 'e' is not assigned and could be declared final
9380	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	35	Avoid using if...else statements without curly braces
9381	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	35	Found 'DU'-anomaly for variable 'popup' (lines '35'-'54').
9382	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	37	Avoid using if...else statements without curly braces
9383	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	37	Found 'DU'-anomaly for variable 'popup' (lines '37'-'54').
9384	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	40	A method should have only one exit point, and that should be the last statement in the method
9385	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	40	Avoid using if...else statements without curly braces
9386	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	44	Avoid using if...else statements without curly braces
9387	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	46	Avoid using if...else statements without curly braces
9388	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	56	Avoid variables with short names like e
9389	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	56	Parameter 'e' is not assigned and could be declared final
9390	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	63	Avoid variables with short names like e
9391	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	63	Overriding method merely calls super
9392	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	63	Parameter 'e' is not assigned and could be declared final
9393	src/pipe/modules/queryeditor/gui/PerformanceTreeArcPathPointHandler.java	67	Avoid variables with short names like e
9394	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	26	The class 'PerformanceTreeNodeHandler' has a Cyclomatic Complexity of 11 (Highest = 24).
9395	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	34	Avoid variables with short names like e
9396	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	39	Local variable 'nodeType' could be declared final
9397	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	42	Local variable 'popup' could be declared final
9398	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	53	Avoid really long methods.
9399	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	53	Avoid variables with short names like e
9400	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	53	The method 'getPopup' has a Cyclomatic Complexity of 24.
9401	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	53	The method getPopup() has an NCSS line count of 112
9402	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	55	Local variable 'nodeType' could be declared final
9403	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	56	Local variable 'popup' could be declared final
9404	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	63	Local variable 'menuItem' could be declared final
9405	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	77	Avoid using if statements without curly braces
9406	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	114	Avoid using if statements without curly braces
9407	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	151	Avoid using if statements without curly braces
9408	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	161	Avoid using if statements without curly braces
9409	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	161	These nested if statements could be combined
9410	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	178	Avoid using if statements without curly braces
9411	src/pipe/modules/queryeditor/gui/PerformanceTreeNodeHandler.java	183	Found 'DD'-anomaly for variable 'menuItem' (lines '183'-'196').
9412	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	40	The class 'PerformanceTreeObjectHandler' has a Cyclomatic Complexity of 6 (Highest = 21).
9413	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	41	This class has too many methods, consider refactoring it.
9414	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
9415	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
9416	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	51	Found non-transient, non-static member. Please mark as transient or provide accessors.
9417	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
9418	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
9419	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	55	It is a good practice to call super() in a constructor
9420	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	69	Avoid variables with short names like e
9421	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	71	Local variable 'popup' could be declared final
9422	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	73	Local variable 'menuItem' could be declared final
9423	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	81	Avoid variables with short names like e
9424	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	84	These nested if statements could be combined
9425	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	86	Avoid variables with short names like m
9426	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	86	Local variable 'm' could be declared final
9427	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	87	Avoid using if statements without curly braces
9428	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	87	Deeply nested if..then statements are hard to read
9429	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	94	Avoid variables with short names like e
9430	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	96	Avoid using if statements without curly braces
9431	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	101	Avoid using if...else statements without curly braces
9432	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	102	Avoid using if...else statements without curly braces
9433	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	103	A high ratio of statements to labels in a switch statement. Consider refactoring.
9434	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	103	A switch statement does not contain a break
9435	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	103	A switch with less than 3 branches is inefficient, use a if statement instead.
9436	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	103	Switch statements should have a default label
9437	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	112	Avoid using if...else statements without curly braces
9438	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	113	Avoid using if...else statements without curly braces
9439	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	128	Avoid really long methods.
9440	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	128	Avoid variables with short names like e
9441	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	128	The method 'mouseDragged' has a Cyclomatic Complexity of 17.
9442	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	128	The method mouseDragged() has an NPath complexity of 416
9443	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	132	Avoid using if...else statements without curly braces
9444	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	134	A high ratio of statements to labels in a switch statement. Consider refactoring.
9445	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	134	A switch statement does not contain a break
9446	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	134	A switch with less than 3 branches is inefficient, use a if statement instead.
9447	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	134	Switch statements should have a default label
9448	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	138	Avoid excessively long variable names like oneSelectionObject
9449	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	175	Local variable 'thisPoint' could be declared final
9450	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	176	Local variable 'thisPointsArc' could be declared final
9451	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	177	Found 'DU'-anomaly for variable 'thisPointsArcID' (lines '177'-'277').
9452	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	265	Avoid using if statements without curly braces
9453	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	325	Avoid really long methods.
9454	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	325	The method 'mouseReleased' has a Cyclomatic Complexity of 21.
9455	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	325	The method mouseReleased() has an NPath complexity of 316
9456	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	329	Avoid using if statements without curly braces
9457	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	337	A high ratio of statements to labels in a switch statement. Consider refactoring.
9458	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	337	A switch with less than 3 branches is inefficient, use a if statement instead.
9459	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	337	Switch statements should have a default label
9460	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	354	Found 'DU'-anomaly for variable 'arcPoint' (lines '354'-'486').
9461	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	377	Avoid if (x != y) ..; else ..;
9462	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	391	Found 'DD'-anomaly for variable 'sourceNode' (lines '391'-'391').
9463	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	391	Found 'DU'-anomaly for variable 'sourceNode' (lines '391'-'486').
9464	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	512	Avoid unnecessary if..then..else statements when returning a boolean
9465	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	515	A method should have only one exit point, and that should be the last statement in the method
9466	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	529	Found 'DD'-anomaly for variable 'arcConnectionOK' (lines '529'-'539').
9467	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	551	Found 'DU'-anomaly for variable 'sourceNodeType' (lines '551'-'580').
9468	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	553	Found 'DU'-anomaly for variable 'arcRole' (lines '553'-'580').
9469	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	595	Found 'DD'-anomaly for variable 'okToGoAhead' (lines '595'-'604').
9470	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	595	Found 'DD'-anomaly for variable 'okToGoAhead' (lines '595'-'605').
9471	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	595	Found 'DD'-anomaly for variable 'okToGoAhead' (lines '595'-'611').
9472	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	595	Found 'DD'-anomaly for variable 'okToGoAhead' (lines '595'-'617').
9473	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	600	Avoid if (x != y) ..; else ..;
9474	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	617	Use bitwise inversion to invert boolean values
9475	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	698	These nested if statements could be combined
9476	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	711	Avoid excessively long variable names like decimalIsAnInteger
9477	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	711	Found 'DD'-anomaly for variable 'decimalIsAnInteger' (lines '711'-'726').
9478	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	712	Avoid excessively long variable names like stringRepresentation
9479	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	714	Position literals first in String comparisons
9480	src/pipe/modules/queryeditor/gui/PerformanceTreeObjectHandler.java	716	String.indexOf(char) is faster than String.indexOf(String).
9481	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	41	The class 'PerformanceTreeSelectionObject' has a Cyclomatic Complexity of 4 (Highest = 21).
9482	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	41	This class has too many methods, consider refactoring it.
9483	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
9484	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	46	Avoid excessively long variable names like selectionRectangle
9485	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	46	Found non-transient, non-static member. Please mark as transient or provide accessors.
9486	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	46	Private field 'selectionRectangle' could be made final; it is only initialized in the declaration or constructor.
9487	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
9488	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	47	Private field 'tempBounds' could be made final; it is only initialized in the declaration or constructor.
9489	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	48	Variables that are final and static should be in all caps.
9490	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	49	Avoid excessively long variable names like selectionColorOutline
9491	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	49	Variables that are final and static should be in all caps.
9492	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
9493	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	51	Found non-transient, non-static member. Please mark as transient or provide accessors.
9494	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	52	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9495	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	55	Parameter '_edit_window' is not assigned and could be declared final
9496	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	60	Parameter '_edit_window' is not assigned and could be declared final
9497	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	65	It is a good practice to call super() in a constructor
9498	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	92	Avoid variables with short names like e
9499	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	92	Parameter 'e' is not assigned and could be declared final
9500	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	92	The method 'processSelection' has a Cyclomatic Complexity of 13.
9501	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	93	Avoid using if statements without curly braces
9502	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	97	Local variable 'netObj' could be declared final
9503	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	102	These nested if statements could be combined
9504	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	109	Local variable 'thisArc' could be declared final
9505	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	110	Local variable 'thisArcPath' could be declared final
9506	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	112	Avoid using if...else statements without curly braces
9507	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	114	Avoid using if...else statements without curly braces
9508	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	122	These nested if statements could be combined
9509	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	129	Avoid variables with short names like g
9510	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	129	Parameter 'g' is not assigned and could be declared final
9511	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	131	Local variable 'g2d' could be declared final
9512	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	138	Avoid variables with short names like x
9513	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	138	Avoid variables with short names like y
9514	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	138	Parameter 'x' is not assigned and could be declared final
9515	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	189	The method 'deleteSelection' has a Cyclomatic Complexity of 16.
9516	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	191	Avoid using if...else statements without curly braces
9517	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	193	Avoid using if...else statements without curly braces
9518	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	197	Avoid using if...else statements without curly braces
9519	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	212	Local variable 'msg' could be declared final
9520	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	263	Avoid reassigning parameters such as 'transX'
9521	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	263	Avoid reassigning parameters such as 'transY'
9522	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	263	The method 'translateSelection' has a Cyclomatic Complexity of 21.
9523	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	263	The method translateSelection() has an NPath complexity of 4368
9524	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	264	Avoid using if statements without curly braces
9525	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	265	A method should have only one exit point, and that should be the last statement in the method
9526	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	269	Avoid variables with short names like p
9527	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	269	Found 'DD'-anomaly for variable 'p' (lines '269'-'273').
9528	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	272	These nested if statements could be combined
9529	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	278	Avoid using if statements without curly braces
9530	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	280	Avoid using if statements without curly braces
9531	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	289	Avoid using if statements without curly braces
9532	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	308	Avoid using for statements without curly braces
9533	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	324	Found 'DD'-anomaly for variable 'selectionCount' (lines '324'-'330').
9534	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	324	Found 'DD'-anomaly for variable 'selectionCount' (lines '324'-'340').
9535	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	329	These nested if statements could be combined
9536	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	330	Found 'DD'-anomaly for variable 'selectionCount' (lines '330'-'330').
9537	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	330	Found 'DD'-anomaly for variable 'selectionCount' (lines '330'-'340').
9538	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	340	Found 'DD'-anomaly for variable 'selectionCount' (lines '340'-'330').
9539	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	340	Found 'DD'-anomaly for variable 'selectionCount' (lines '340'-'340').
9540	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	354	Avoid if (x != y) ..; else ..;
9541	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	362	A method should have only one exit point, and that should be the last statement in the method
9542	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	365	A method should have only one exit point, and that should be the last statement in the method
9543	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	383	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '383'-'387').
9544	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	387	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '387'-'387').
9545	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	389	Avoid unnecessary if..then..else statements when returning a boolean
9546	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	390	A method should have only one exit point, and that should be the last statement in the method
9547	src/pipe/modules/queryeditor/gui/PerformanceTreeSelectionObject.java	392	A method should have only one exit point, and that should be the last statement in the method
9548	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
9549	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	20	Private field 'transform' could be made final; it is only initialized in the declaration or constructor.
9550	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	21	Avoid unused private fields such as 'queryView'.
9551	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
9552	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	24	Parameter 'view' is not assigned and could be declared final
9553	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	28	Parameter 'view' is not assigned and could be declared final
9554	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	32	Parameter 'pct' is not assigned and could be declared final
9555	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	32	Parameter 'view' is not assigned and could be declared final
9556	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	37	Parameter 'pct' is not assigned and could be declared final
9557	src/pipe/modules/queryeditor/gui/PerformanceTreeZoomController.java	67	Avoid using if statements without curly braces
9558	src/pipe/modules/queryeditor/gui/QueryAction.java	22	Abstract classes should be named AbstractXXX
9559	src/pipe/modules/queryeditor/gui/QueryAction.java	24	Parameter 'keystroke' is not assigned and could be declared final
9560	src/pipe/modules/queryeditor/gui/QueryAction.java	24	Parameter 'name' is not assigned and could be declared final
9561	src/pipe/modules/queryeditor/gui/QueryAction.java	24	Parameter 'tooltip' is not assigned and could be declared final
9562	src/pipe/modules/queryeditor/gui/QueryAction.java	26	Local variable 'iconURL' could be declared final
9563	src/pipe/modules/queryeditor/gui/QueryAction.java	27	Local variable 'selectedIconURL' could be declared final
9564	src/pipe/modules/queryeditor/gui/QueryAction.java	31	Avoid using if statements without curly braces
9565	src/pipe/modules/queryeditor/gui/QueryAction.java	33	Avoid using if statements without curly braces
9566	src/pipe/modules/queryeditor/gui/QueryAction.java	36	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
9567	src/pipe/modules/queryeditor/gui/QueryAction.java	45	Parameter 'selected' is not assigned and could be declared final
9568	src/pipe/modules/queryeditor/gui/QueryAction.java	46	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
9569	src/pipe/modules/queryeditor/gui/QueryEditor.java	13	A high number of imports can indicate a high degree of coupling within an object.
9570	src/pipe/modules/queryeditor/gui/QueryEditor.java	100	Avoid really long classes.
9571	src/pipe/modules/queryeditor/gui/QueryEditor.java	100	The class 'QueryEditor' has a Cyclomatic Complexity of 3 (Highest = 31).
9572	src/pipe/modules/queryeditor/gui/QueryEditor.java	101	This class has too many methods, consider refactoring it.
9573	src/pipe/modules/queryeditor/gui/QueryEditor.java	103	Found non-transient, non-static member. Please mark as transient or provide accessors.
9574	src/pipe/modules/queryeditor/gui/QueryEditor.java	105	Found non-transient, non-static member. Please mark as transient or provide accessors.
9575	src/pipe/modules/queryeditor/gui/QueryEditor.java	106	Found non-transient, non-static member. Please mark as transient or provide accessors.
9576	src/pipe/modules/queryeditor/gui/QueryEditor.java	106	It is somewhat confusing to have a field name matching the declaring class name
9577	src/pipe/modules/queryeditor/gui/QueryEditor.java	107	Found non-transient, non-static member. Please mark as transient or provide accessors.
9578	src/pipe/modules/queryeditor/gui/QueryEditor.java	108	Found non-transient, non-static member. Please mark as transient or provide accessors.
9579	src/pipe/modules/queryeditor/gui/QueryEditor.java	127	Perhaps 'toolBar1' could be replaced by a local variable.
9580	src/pipe/modules/queryeditor/gui/QueryEditor.java	129	It is a good practice to call super() in a constructor
9581	src/pipe/modules/queryeditor/gui/QueryEditor.java	132	Local variable 'osName' could be declared final
9582	src/pipe/modules/queryeditor/gui/QueryEditor.java	150	System.out.print is used
9583	src/pipe/modules/queryeditor/gui/QueryEditor.java	154	System.out.print is used
9584	src/pipe/modules/queryeditor/gui/QueryEditor.java	158	System.out.print is used
9585	src/pipe/modules/queryeditor/gui/QueryEditor.java	162	System.out.print is used
9586	src/pipe/modules/queryeditor/gui/QueryEditor.java	166	System.out.print is used
9587	src/pipe/modules/queryeditor/gui/QueryEditor.java	175	Overridable method 'setTitle' called during object construction
9588	src/pipe/modules/queryeditor/gui/QueryEditor.java	176	Local variable 'minFrameSize' could be declared final
9589	src/pipe/modules/queryeditor/gui/QueryEditor.java	177	Local variable 'prefFrameSize' could be declared final
9590	src/pipe/modules/queryeditor/gui/QueryEditor.java	183	Local variable 'contentPane' could be declared final
9591	src/pipe/modules/queryeditor/gui/QueryEditor.java	199	Avoid really long methods.
9592	src/pipe/modules/queryeditor/gui/QueryEditor.java	202	The String literal "New" appears 5 times in this file; the first occurrence is on line 201
9593	src/pipe/modules/queryeditor/gui/QueryEditor.java	203	The String literal "Open" appears 5 times in this file; the first occurrence is on line 202
9594	src/pipe/modules/queryeditor/gui/QueryEditor.java	204	The String literal "Close" appears 5 times in this file; the first occurrence is on line 203
9595	src/pipe/modules/queryeditor/gui/QueryEditor.java	205	The String literal "Save" appears 5 times in this file; the first occurrence is on line 204
9596	src/pipe/modules/queryeditor/gui/QueryEditor.java	207	The String literal "PNG" appears 4 times in this file; the first occurrence is on line 206
9597	src/pipe/modules/queryeditor/gui/QueryEditor.java	220	Local variable 'select' could be declared final
9598	src/pipe/modules/queryeditor/gui/QueryEditor.java	221	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
9599	src/pipe/modules/queryeditor/gui/QueryEditor.java	447	Avoid using if statements without curly braces
9600	src/pipe/modules/queryeditor/gui/QueryEditor.java	456	Avoid instantiating new objects inside loops
9601	src/pipe/modules/queryeditor/gui/QueryEditor.java	519	Avoid variables with short names like e
9602	src/pipe/modules/queryeditor/gui/QueryEditor.java	538	Avoid variables with short names like e
9603	src/pipe/modules/queryeditor/gui/QueryEditor.java	543	Avoid if (x != y) ..; else ..;
9604	src/pipe/modules/queryeditor/gui/QueryEditor.java	583	Avoid variables with short names like o
9605	src/pipe/modules/queryeditor/gui/QueryEditor.java	585	Avoid using if statements without curly braces
9606	src/pipe/modules/queryeditor/gui/QueryEditor.java	589	Parameter 'forceSaveAs' is not assigned and could be declared final
9607	src/pipe/modules/queryeditor/gui/QueryEditor.java	591	Avoid using if statements without curly braces
9608	src/pipe/modules/queryeditor/gui/QueryEditor.java	594	Avoid if (x != y) ..; else ..;
9609	src/pipe/modules/queryeditor/gui/QueryEditor.java	602	Found 'DD'-anomaly for variable 'path' (lines '799'-'801').
9610	src/pipe/modules/queryeditor/gui/QueryEditor.java	602	Found 'DD'-anomaly for variable 'path' (lines '799'-'802').
9611	src/pipe/modules/queryeditor/gui/QueryEditor.java	603	Avoid if (x != y) ..; else ..;
9612	src/pipe/modules/queryeditor/gui/QueryEditor.java	604	Avoid using if...else statements without curly braces
9613	src/pipe/modules/queryeditor/gui/QueryEditor.java	605	Avoid using if...else statements without curly braces
9614	src/pipe/modules/queryeditor/gui/QueryEditor.java	607	Avoid using if statements without curly braces
9615	src/pipe/modules/queryeditor/gui/QueryEditor.java	654	Found 'DD'-anomaly for variable 'name' (lines '851'-'855').
9616	src/pipe/modules/queryeditor/gui/QueryEditor.java	654	Found 'DD'-anomaly for variable 'name' (lines '851'-'872').
9617	src/pipe/modules/queryeditor/gui/QueryEditor.java	675	Found 'DU'-anomaly for variable 'name' (lines '872'-'904').
9618	src/pipe/modules/queryeditor/gui/QueryEditor.java	684	Avoid printStackTrace(); use a logger call instead.
9619	src/pipe/modules/queryeditor/gui/QueryEditor.java	724	Switch statements should have a default label
9620	src/pipe/modules/queryeditor/gui/QueryEditor.java	731	A method should have only one exit point, and that should be the last statement in the method
9621	src/pipe/modules/queryeditor/gui/QueryEditor.java	745	Avoid unnecessary comparisons in boolean expressions
9622	src/pipe/modules/queryeditor/gui/QueryEditor.java	745	Avoid using if statements without curly braces
9623	src/pipe/modules/queryeditor/gui/QueryEditor.java	746	A method should have only one exit point, and that should be the last statement in the method
9624	src/pipe/modules/queryeditor/gui/QueryEditor.java	758	This statement may have some unnecessary parentheses
9625	src/pipe/modules/queryeditor/gui/QueryEditor.java	760	No need to call String.valueOf to append to a string.
9626	src/pipe/modules/queryeditor/gui/QueryEditor.java	779	Found 'DD'-anomaly for variable 'nextAction' (lines '976'-'976').
9627	src/pipe/modules/queryeditor/gui/QueryEditor.java	779	Found 'DD'-anomaly for variable 'nextAction' (lines '976'-'980').
9628	src/pipe/modules/queryeditor/gui/QueryEditor.java	779	Found 'DU'-anomaly for variable 'nextAction' (lines '976'-'987').
9629	src/pipe/modules/queryeditor/gui/QueryEditor.java	784	Use equals() to compare object references.
9630	src/pipe/modules/queryeditor/gui/QueryEditor.java	832	Avoid using if...else statements without curly braces
9631	src/pipe/modules/queryeditor/gui/QueryEditor.java	833	Avoid using if...else statements without curly braces
9632	src/pipe/modules/queryeditor/gui/QueryEditor.java	848	The class 'FileAction' has a Cyclomatic Complexity of 10 (Highest = 17).
9633	src/pipe/modules/queryeditor/gui/QueryEditor.java	855	The method 'actionPerformed' has a Cyclomatic Complexity of 17.
9634	src/pipe/modules/queryeditor/gui/QueryEditor.java	859	Avoid using if...else statements without curly braces
9635	src/pipe/modules/queryeditor/gui/QueryEditor.java	918	System.exit() should not be used in J2EE/JEE apps
9636	src/pipe/modules/queryeditor/gui/QueryEditor.java	964	Found 'DU'-anomaly for variable 'currentXNoZoom' (lines '1,161'-'1,222').
9637	src/pipe/modules/queryeditor/gui/QueryEditor.java	965	Found 'DU'-anomaly for variable 'currentYNoZoom' (lines '1,162'-'1,222').
9638	src/pipe/modules/queryeditor/gui/QueryEditor.java	967	Found 'DD'-anomaly for variable 'selection' (lines '1,164'-'1,182').
9639	src/pipe/modules/queryeditor/gui/QueryEditor.java	967	Found 'DD'-anomaly for variable 'selection' (lines '1,164'-'1,185').
9640	src/pipe/modules/queryeditor/gui/QueryEditor.java	967	Found 'DU'-anomaly for variable 'selection' (lines '1,164'-'1,222').
9641	src/pipe/modules/queryeditor/gui/QueryEditor.java	968	Found 'DD'-anomaly for variable 'strToTest' (lines '1,165'-'1,188').
9642	src/pipe/modules/queryeditor/gui/QueryEditor.java	968	Found 'DU'-anomaly for variable 'strToTest' (lines '1,165'-'1,222').
9643	src/pipe/modules/queryeditor/gui/QueryEditor.java	985	Found 'DD'-anomaly for variable 'selection' (lines '1,182'-'1,185').
9644	src/pipe/modules/queryeditor/gui/QueryEditor.java	992	Avoid if (x != y) ..; else ..;
9645	src/pipe/modules/queryeditor/gui/QueryEditor.java	996	A method should have only one exit point, and that should be the last statement in the method
9646	src/pipe/modules/queryeditor/gui/QueryEditor.java	1031	Found 'DD'-anomaly for variable 'toTest' (lines '1,228'-'1,232').
9647	src/pipe/modules/queryeditor/gui/QueryEditor.java	1040	A method should have only one exit point, and that should be the last statement in the method
9648	src/pipe/modules/queryeditor/gui/QueryEditor.java	1105	Assigning an Object to null is a code smell. Consider refactoring.
9649	src/pipe/modules/queryeditor/gui/QueryException.java	15	Parameter 'msg' is not assigned and could be declared final
9650	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
9651	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	27	Avoid reassigning parameters such as 'filetype'
9652	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	27	Parameter 'ext' is not assigned and could be declared final
9653	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	27	Parameter 'path' is not assigned and could be declared final
9654	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	29	Avoid using if statements without curly braces
9655	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	32	Avoid variables with short names like f
9656	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	32	Local variable 'f' could be declared final
9657	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	33	Avoid using if statements without curly braces
9658	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	34	Avoid using if statements without curly braces
9659	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	37	Local variable 'filter' could be declared final
9660	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	41	Parameter 'path' is not assigned and could be declared final
9661	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	53	A method should have only one exit point, and that should be the last statement in the method
9662	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	54	Avoid empty catch blocks
9663	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	62	Avoid variables with short names like f
9664	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	63	Avoid using if statements without curly braces
9665	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	67	A method should have only one exit point, and that should be the last statement in the method
9666	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	69	A method should have only one exit point, and that should be the last statement in the method
9667	src/pipe/modules/queryeditor/gui/QueryFileBrowser.java	70	Avoid empty catch blocks
9668	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
9669	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
9670	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
9671	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
9672	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
9673	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	27	Private field 'label' could be made final; it is only initialized in the declaration or constructor.
9674	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	36	Parameter 'newText' is not assigned and could be declared final
9675	src/pipe/modules/queryeditor/gui/QueryStatusBar.java	40	Parameter 'type' is not assigned and could be declared final
9676	src/pipe/modules/queryeditor/gui/QueryView.java	11	A high number of imports can indicate a high degree of coupling within an object.
9677	src/pipe/modules/queryeditor/gui/QueryView.java	67	Avoid unused imports such as 'pipe.modules.queryeditor.io.QueryData'
9678	src/pipe/modules/queryeditor/gui/QueryView.java	67	Avoid unused imports such as 'pipe.modules.queryeditor.io.QueryData'
9679	src/pipe/modules/queryeditor/gui/QueryView.java	70	This class has too many methods, consider refactoring it.
9680	src/pipe/modules/queryeditor/gui/QueryView.java	76	Found non-transient, non-static member. Please mark as transient or provide accessors.
9681	src/pipe/modules/queryeditor/gui/QueryView.java	76	Use explicit scoping instead of the default package private level
9682	src/pipe/modules/queryeditor/gui/QueryView.java	77	Found non-transient, non-static member. Please mark as transient or provide accessors.
9683	src/pipe/modules/queryeditor/gui/QueryView.java	78	Found non-transient, non-static member. Please mark as transient or provide accessors.
9684	src/pipe/modules/queryeditor/gui/QueryView.java	80	It is a good practice to call super() in a constructor
9685	src/pipe/modules/queryeditor/gui/QueryView.java	87	Local variable 'handler' could be declared final
9686	src/pipe/modules/queryeditor/gui/QueryView.java	98	Local variable 'canvasWidth' could be declared final
9687	src/pipe/modules/queryeditor/gui/QueryView.java	99	Local variable 'canvasHeight' could be declared final
9688	src/pipe/modules/queryeditor/gui/QueryView.java	100	Local variable 'xLoc' could be declared final
9689	src/pipe/modules/queryeditor/gui/QueryView.java	101	Local variable 'yLoc' could be declared final
9690	src/pipe/modules/queryeditor/gui/QueryView.java	105	Found 'DD'-anomaly for variable 'ptObject' (lines '105'-'106').
9691	src/pipe/modules/queryeditor/gui/QueryView.java	140	Avoid variables with short names like l
9692	src/pipe/modules/queryeditor/gui/QueryView.java	150	Deeply nested if..then statements are hard to read
9693	src/pipe/modules/queryeditor/gui/QueryView.java	156	Deeply nested if..then statements are hard to read
9694	src/pipe/modules/queryeditor/gui/QueryView.java	172	Avoid variables with short names like c
9695	src/pipe/modules/queryeditor/gui/QueryView.java	178	Avoid using if...else statements without curly braces
9696	src/pipe/modules/queryeditor/gui/QueryView.java	180	Avoid using if...else statements without curly braces
9697	src/pipe/modules/queryeditor/gui/QueryView.java	181	Avoid using if statements without curly braces
9698	src/pipe/modules/queryeditor/gui/QueryView.java	217	Avoid variables with short names like o
9699	src/pipe/modules/queryeditor/gui/QueryView.java	219	No need to check for null before an instanceof
9700	src/pipe/modules/queryeditor/gui/QueryView.java	232	Avoid variables with short names like g
9701	src/pipe/modules/queryeditor/gui/QueryView.java	234	Avoid using if statements without curly braces
9702	src/pipe/modules/queryeditor/gui/QueryView.java	235	A method should have only one exit point, and that should be the last statement in the method
9703	src/pipe/modules/queryeditor/gui/QueryView.java	249	Avoid variables with short names like g
9704	src/pipe/modules/queryeditor/gui/QueryView.java	269	Avoid using if statements without curly braces
9705	src/pipe/modules/queryeditor/gui/QueryView.java	274	Avoid using if statements without curly braces
9706	src/pipe/modules/queryeditor/gui/QueryView.java	276	Avoid using if statements without curly braces
9707	src/pipe/modules/queryeditor/gui/QueryView.java	301	Position literals first in String comparisons
9708	src/pipe/modules/queryeditor/gui/QueryView.java	302	Avoid using if...else statements without curly braces
9709	src/pipe/modules/queryeditor/gui/QueryView.java	303	Position literals first in String comparisons
9710	src/pipe/modules/queryeditor/gui/QueryView.java	304	Avoid using if...else statements without curly braces
9711	src/pipe/modules/queryeditor/gui/QueryView.java	305	Position literals first in String comparisons
9712	src/pipe/modules/queryeditor/gui/QueryView.java	324	The class 'MouseHandler' has a Cyclomatic Complexity of 13 (Highest = 31).
9713	src/pipe/modules/queryeditor/gui/QueryView.java	327	Found non-transient, non-static member. Please mark as transient or provide accessors.
9714	src/pipe/modules/queryeditor/gui/QueryView.java	328	Found non-transient, non-static member. Please mark as transient or provide accessors.
9715	src/pipe/modules/queryeditor/gui/QueryView.java	328	Use explicit scoping instead of the default package private level
9716	src/pipe/modules/queryeditor/gui/QueryView.java	331	Avoid really long methods.
9717	src/pipe/modules/queryeditor/gui/QueryView.java	331	The method 'mousePressed' has a Cyclomatic Complexity of 31.
9718	src/pipe/modules/queryeditor/gui/QueryView.java	331	The method mousePressed() has an NCSS line count of 149
9719	src/pipe/modules/queryeditor/gui/QueryView.java	337	Found 'DU'-anomaly for variable 'startX' (lines '337'-'504').
9720	src/pipe/modules/queryeditor/gui/QueryView.java	338	Found 'DU'-anomaly for variable 'startY' (lines '338'-'504').
9721	src/pipe/modules/queryeditor/gui/QueryView.java	340	Switch statements should have a default label
9722	src/pipe/modules/queryeditor/gui/QueryView.java	350	Found 'DD'-anomaly for variable 'ptObject' (lines '350'-'353').
9723	src/pipe/modules/queryeditor/gui/QueryView.java	370	Found 'DD'-anomaly for variable 'ptObject' (lines '370'-'372').
9724	src/pipe/modules/queryeditor/gui/QueryView.java	377	Found 'DD'-anomaly for variable 'ptObject' (lines '377'-'379').
9725	src/pipe/modules/queryeditor/gui/QueryView.java	383	Found 'DD'-anomaly for variable 'ptObject' (lines '383'-'384').
9726	src/pipe/modules/queryeditor/gui/QueryView.java	388	Found 'DD'-anomaly for variable 'ptObject' (lines '388'-'389').
9727	src/pipe/modules/queryeditor/gui/QueryView.java	393	Found 'DD'-anomaly for variable 'ptObject' (lines '393'-'395').
9728	src/pipe/modules/queryeditor/gui/QueryView.java	399	Found 'DD'-anomaly for variable 'ptObject' (lines '399'-'400').
9729	src/pipe/modules/queryeditor/gui/QueryView.java	404	Found 'DD'-anomaly for variable 'ptObject' (lines '404'-'405').
9730	src/pipe/modules/queryeditor/gui/QueryView.java	409	Found 'DD'-anomaly for variable 'ptObject' (lines '409'-'410').
9731	src/pipe/modules/queryeditor/gui/QueryView.java	414	Found 'DD'-anomaly for variable 'ptObject' (lines '414'-'415').
9732	src/pipe/modules/queryeditor/gui/QueryView.java	419	Found 'DD'-anomaly for variable 'ptObject' (lines '419'-'421').
9733	src/pipe/modules/queryeditor/gui/QueryView.java	425	Found 'DD'-anomaly for variable 'ptObject' (lines '425'-'427').
9734	src/pipe/modules/queryeditor/gui/QueryView.java	431	Found 'DD'-anomaly for variable 'ptObject' (lines '431'-'432').
9735	src/pipe/modules/queryeditor/gui/QueryView.java	436	Found 'DD'-anomaly for variable 'ptObject' (lines '436'-'437').
9736	src/pipe/modules/queryeditor/gui/QueryView.java	441	Found 'DD'-anomaly for variable 'ptObject' (lines '441'-'442').
9737	src/pipe/modules/queryeditor/gui/QueryView.java	446	Found 'DD'-anomaly for variable 'ptObject' (lines '446'-'447').
9738	src/pipe/modules/queryeditor/gui/QueryView.java	451	Found 'DD'-anomaly for variable 'ptObject' (lines '451'-'452').
9739	src/pipe/modules/queryeditor/gui/QueryView.java	456	Found 'DD'-anomaly for variable 'ptObject' (lines '456'-'457').
9740	src/pipe/modules/queryeditor/gui/QueryView.java	461	Found 'DD'-anomaly for variable 'ptObject' (lines '461'-'462').
9741	src/pipe/modules/queryeditor/gui/QueryView.java	466	Found 'DD'-anomaly for variable 'ptObject' (lines '466'-'467').
9742	src/pipe/modules/queryeditor/gui/QueryView.java	471	Found 'DD'-anomaly for variable 'ptObject' (lines '471'-'472').
9743	src/pipe/modules/queryeditor/gui/QueryView.java	476	Found 'DD'-anomaly for variable 'ptObject' (lines '476'-'477').
9744	src/pipe/modules/queryeditor/gui/QueryView.java	481	Found 'DD'-anomaly for variable 'ptObject' (lines '481'-'482').
9745	src/pipe/modules/queryeditor/gui/QueryView.java	486	Found 'DD'-anomaly for variable 'ptObject' (lines '486'-'487').
9746	src/pipe/modules/queryeditor/gui/QueryView.java	491	Found 'DD'-anomaly for variable 'ptObject' (lines '491'-'492').
9747	src/pipe/modules/queryeditor/gui/QueryView.java	496	Found 'DD'-anomaly for variable 'ptObject' (lines '496'-'497').
9748	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
9749	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	22	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
9750	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
9751	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	23	Use explicit scoping instead of the default package private level
9752	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	25	It is a good practice to call super() in a constructor
9753	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	25	Parameter 'arc' is not assigned and could be declared final
9754	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	25	Parameter 'mousepos' is not assigned and could be declared final
9755	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	30	Local variable 'offset' could be declared final
9756	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcAction.java	34	Parameter 'arg0' is not assigned and could be declared final
9757	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
9758	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	23	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
9759	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	25	It is a good practice to call super() in a constructor
9760	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	25	Parameter 'component' is not assigned and could be declared final
9761	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	29	Avoid variables with short names like e
9762	src/pipe/modules/queryeditor/gui/SplitPerformanceTreeArcPathPointAction.java	29	Parameter 'e' is not assigned and could be declared final
9763	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	11	A high number of imports can indicate a high degree of coupling within an object.
9764	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	79	Avoid really long classes.
9765	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	79	The class 'TextQueryEditor' has a Cyclomatic Complexity of 8 (Highest = 53).
9766	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	79	This class has too many methods, consider refactoring it.
9767	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	79	Too many fields
9768	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	81	Found non-transient, non-static member. Please mark as transient or provide accessors.
9769	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	81	Private field 'queryDisplay' could be made final; it is only initialized in the declaration or constructor.
9770	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	82	Found non-transient, non-static member. Please mark as transient or provide accessors.
9771	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	82	Private field 'queryInit' could be made final; it is only initialized in the declaration or constructor.
9772	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	82	The String literal "-- Select --" appears 16 times in this file; the first occurrence is on line 82
9773	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	83	Found non-transient, non-static member. Please mark as transient or provide accessors.
9774	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	83	Private field 'selector' could be made final; it is only initialized in the declaration or constructor.
9775	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	84	Found non-transient, non-static member. Please mark as transient or provide accessors.
9776	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	85	Found non-transient, non-static member. Please mark as transient or provide accessors.
9777	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	85	Private field 'doneButton' could be made final; it is only initialized in the declaration or constructor.
9778	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	86	Private field 'resetButton' could be made final; it is only initialized in the declaration or constructor.
9779	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	94	The String literal "black" appears 7 times in this file; the first occurrence is on line 94
9780	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	96	Avoid unused private fields such as 'guiDialog'.
9781	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	100	Avoid unused private fields such as 'redoButton'.
9782	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	101	Avoid unused private fields such as 'menuBar'.
9783	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	108	Avoid unused private fields such as 'currentUndoStep'.
9784	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	109	Avoid using implementation types like 'ArrayList'; use the interface instead
9785	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	109	Avoid using implementation types like 'ArrayList'; use the interface instead
9786	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	113	Avoid unused private fields such as 'prev_valuenode'.
9787	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	113	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9788	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	115	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9789	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	119	It is a good practice to call super() in a constructor
9790	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	126	Local variable 'buttonPane' could be declared final
9791	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	132	Avoid variables with short names like e
9792	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	132	Parameter 'e' is not assigned and could be declared final
9793	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	138	Avoid variables with short names like e
9794	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	138	Parameter 'e' is not assigned and could be declared final
9795	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	143	Local variable 'topPane' could be declared final
9796	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	146	Avoid unused local variables such as 'editMenu'.
9797	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	146	Found 'DU'-anomaly for variable 'editMenu' (lines '146'-'221').
9798	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	146	Found 'DU'-anomaly for variable 'editMenu' (lines '146'-'221').
9799	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	146	Found 'DU'-anomaly for variable 'editMenu' (lines '146'-'221').
9800	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	146	Local variable 'editMenu' could be declared final
9801	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	154	Avoid variables with short names like e
9802	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	154	Parameter 'e' is not assigned and could be declared final
9803	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	156	Local variable 'undo' could be declared final
9804	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	169	Local variable 'mainStyle' could be declared final
9805	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	223	The class 'SelectorListener' has a Cyclomatic Complexity of 31 (Highest = 30).
9806	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	224	Avoid really long methods.
9807	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	224	Avoid variables with short names like e
9808	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	224	Parameter 'e' is not assigned and could be declared final
9809	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	224	The method 'actionPerformed' has a Cyclomatic Complexity of 30.
9810	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	228	Avoid if (x != y) ..; else ..;
9811	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	228	Position literals first in String comparisons
9812	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	232	Found 'DD'-anomaly for variable 'newQuery' (lines '232'-'237').
9813	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	232	Found 'DD'-anomaly for variable 'newQuery' (lines '232'-'382').
9814	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	232	Found 'DU'-anomaly for variable 'newQuery' (lines '232'-'394').
9815	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	233	Found 'DU'-anomaly for variable 'selectItem' (lines '233'-'394').
9816	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	234	Use equals() to compare strings instead of '==' or '!='
9817	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	236	Use equals() to compare strings instead of '==' or '!='
9818	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	Avoid if (x != y) ..; else ..;
9819	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	Position literals first in String comparisons
9820	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	Position literals first in String comparisons
9821	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	Position literals first in String comparisons
9822	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	Position literals first in String comparisons
9823	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	The String literal "Assign Actions" appears 4 times in this file; the first occurrence is on line 241
9824	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	The String literal "Assign States" appears 4 times in this file; the first occurrence is on line 241
9825	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	241	The String literal "Set Numerical Value" appears 5 times in this file; the first occurrence is on line 241
9826	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	249	Found 'DD'-anomaly for variable 'numLabel' (lines '249'-'264').
9827	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	249	Found 'DU'-anomaly for variable 'numLabel' (lines '249'-'394').
9828	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	259	Found 'DD'-anomaly for variable 'numVal' (lines '259'-'259').
9829	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	259	Found 'DU'-anomaly for variable 'numVal' (lines '259'-'394').
9830	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	270	Deeply nested if..then statements are hard to read
9831	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	285	Avoid using if statements without curly braces
9832	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	317	Avoid using if statements without curly braces
9833	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	323	Avoid empty if statements
9834	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	376	Avoid if (x != y) ..; else ..;
9835	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	398	Parameter 'add' is not assigned and could be declared final
9836	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	398	The method 'updateQuery' has a Cyclomatic Complexity of 14.
9837	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	398	The method updateQuery() has an NPath complexity of 528
9838	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	399	String.indexOf(char) is faster than String.indexOf(String).
9839	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	400	String.indexOf(char) is faster than String.indexOf(String).
9840	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	401	Avoid using if statements without curly braces
9841	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	402	Avoid using if statements without curly braces
9842	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	430	System.out.print is used
9843	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	431	System.exit() should not be used in J2EE/JEE apps
9844	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	437	System.out.print is used
9845	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	438	System.exit() should not be used in J2EE/JEE apps
9846	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	447	Found 'DU'-anomaly for variable 'query' (lines '447'-'482').
9847	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	452	Found 'DD'-anomaly for variable 'left' (lines '452'-'452').
9848	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	452	Found 'DD'-anomaly for variable 'left' (lines '452'-'466').
9849	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	452	Found 'DU'-anomaly for variable 'left' (lines '452'-'482').
9850	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	456	Avoid instantiating new objects inside loops
9851	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	463	Avoid variables with short names like i
9852	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	485	Avoid really long methods.
9853	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	485	The method 'updateSelector' has a Cyclomatic Complexity of 14.
9854	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	636	System.out.print is used
9855	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	637	System.exit() should not be used in J2EE/JEE apps
9856	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	651	Assigning an Object to null is a code smell. Consider refactoring.
9857	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	670	Avoid using if...else statements without curly braces
9858	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	671	Avoid using if...else statements without curly braces
9859	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	675	Use explicit scoping instead of the default package private level
9860	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	675	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9861	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	676	Use explicit scoping instead of the default package private level
9862	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	676	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9863	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	677	Use explicit scoping instead of the default package private level
9864	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	677	Variables that are not final should not contain underscores (except for underscores in standard prefix/suffix).
9865	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	678	Use explicit scoping instead of the default package private level
9866	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	679	Use explicit scoping instead of the default package private level
9867	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	687	Avoid unnecessary if..then..else statements when returning a boolean
9868	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	688	A method should have only one exit point, and that should be the last statement in the method
9869	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	697	Found 'DD'-anomaly for variable 'numOfArcsToDelete' (lines '697'-'699').
9870	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	719	System.out.print is used
9871	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	720	System.exit() should not be used in J2EE/JEE apps
9872	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	734	Method names should not contain underscores
9873	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	738	Method names should not contain underscores
9874	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	742	Method names should not contain underscores
9875	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	746	Method names should not contain underscores
9876	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	752	Avoid really long methods.
9877	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	752	The method createNode() has an NCSS line count of 128
9878	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	754	These nested if statements could be combined
9879	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'771').
9880	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'773').
9881	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'775').
9882	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'777').
9883	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'784').
9884	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'788').
9885	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'790').
9886	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'792').
9887	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'794').
9888	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'796').
9889	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'798').
9890	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'800').
9891	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'802').
9892	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'804').
9893	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'806').
9894	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'808').
9895	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'815').
9896	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'818').
9897	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'820').
9898	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'822').
9899	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'824').
9900	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'826').
9901	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DD'-anomaly for variable 'node' (lines '755'-'828').
9902	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	755	Found 'DU'-anomaly for variable 'node' (lines '755'-'916').
9903	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	756	Found 'DU'-anomaly for variable 'expectingArcID' (lines '756'-'916').
9904	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	767	A method should have only one exit point, and that should be the last statement in the method
9905	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	778	Avoid using if statements without curly braces
9906	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	912	A method should have only one exit point, and that should be the last statement in the method
9907	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	919	Found 'DD'-anomaly for variable 'arcToBeAssigned' (lines '919'-'923').
9908	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	919	Found 'DD'-anomaly for variable 'arcToBeAssigned' (lines '919'-'928').
9909	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	919	Found 'DD'-anomaly for variable 'arcToBeAssigned' (lines '919'-'941').
9910	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	949	Found 'DD'-anomaly for variable 'adjustRate' (lines '949'-'951').
9911	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	949	Found 'DD'-anomaly for variable 'adjustRate' (lines '949'-'953').
9912	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	949	Found 'DD'-anomaly for variable 'adjustRate' (lines '949'-'955').
9913	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	949	Found 'DD'-anomaly for variable 'adjustRate' (lines '949'-'957').
9914	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	949	Found 'DD'-anomaly for variable 'adjustRate' (lines '949'-'959').
9915	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	951	Found 'DU'-anomaly for variable 'adjustRate' (lines '951'-'982').
9916	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	953	Found 'DU'-anomaly for variable 'adjustRate' (lines '953'-'982').
9917	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	954	This statement may have some unnecessary parentheses
9918	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	955	Found 'DU'-anomaly for variable 'adjustRate' (lines '955'-'982').
9919	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	956	This statement may have some unnecessary parentheses
9920	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	956	This statement may have some unnecessary parentheses
9921	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	957	Found 'DU'-anomaly for variable 'adjustRate' (lines '957'-'982').
9922	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	959	Found 'DU'-anomaly for variable 'adjustRate' (lines '959'-'982').
9923	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	965	Avoid empty if statements
9924	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	985	Method names should not start with capital letters
9925	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	987	A method should have only one exit point, and that should be the last statement in the method
9926	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	997	Found 'DU'-anomaly for variable 'arcIndex' (lines '997'-'1,017').
9927	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1011	A method should have only one exit point, and that should be the last statement in the method
9928	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1022	Avoid using if...else statements without curly braces
9929	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1024	Avoid using if...else statements without curly braces
9930	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1040	Avoid using if...else statements without curly braces
9931	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1085	Avoid if (x != y) ..; else ..;
9932	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1114	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '1,114'-'1,118').
9933	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1118	Found 'DD'-anomaly for variable 'optionalArcCount' (lines '1,118'-'1,118').
9934	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1120	Avoid unnecessary if..then..else statements when returning a boolean
9935	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1128	Avoid unused private methods such as 'getHrate()'.
9936	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1129	Found 'DD'-anomaly for variable 'hrate' (lines '1,129'-'1,142').
9937	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1129	Found 'DD'-anomaly for variable 'hrate' (lines '1,129'-'1,144').
9938	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1129	Found 'DD'-anomaly for variable 'hrate' (lines '1,129'-'1,146').
9939	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1129	Found 'DD'-anomaly for variable 'hrate' (lines '1,129'-'1,148').
9940	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1145	This statement may have some unnecessary parentheses
9941	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1158	Assigning an Object to null is a code smell. Consider refactoring.
9942	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1168	System.out.print is used
9943	src/pipe/modules/queryeditor/gui/TextQueryEditor.java	1169	System.exit() should not be used in J2EE/JEE apps
9944	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
9945	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	20	Private field 'selected' could be made final; it is only initialized in the declaration or constructor.
9946	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	23	It is a good practice to call super() in a constructor
9947	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	23	Parameter 'component' is not assigned and could be declared final
9948	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	28	Avoid variables with short names like e
9949	src/pipe/modules/queryeditor/gui/TogglePerformanceTreeArcPathPointAction.java	28	Parameter 'e' is not assigned and could be declared final
9950	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
9951	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
9952	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	25	Avoid variables with short names like x
9953	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	25	Avoid variables with short names like y
9954	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	25	Parameter 'x' is not assigned and could be declared final
9955	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	25	Parameter 'y' is not assigned and could be declared final
9956	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	27	Overridable method 'setOriginalX' called during object construction
9957	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	28	Overridable method 'setOriginalY' called during object construction
9958	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	33	Avoid variables with short names like x
9959	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	33	Parameter 'x' is not assigned and could be declared final
9960	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	37	Avoid variables with short names like y
9961	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	37	Parameter 'y' is not assigned and could be declared final
9962	src/pipe/modules/queryeditor/gui/ViewExpansionComponent.java	42	Local variable 'scaleFactor' could be declared final
9963	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	29	The class 'PerformanceTreeArc' has a Cyclomatic Complexity of 2 (Highest = 11).
9964	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	30	This class has too many methods, consider refactoring it.
9965	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
9966	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	41	Avoid excessively long variable names like startPositionXInput
9967	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	42	Avoid excessively long variable names like startPositionYInput
9968	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	56	Overridable method 'setTarget' called during object construction
9969	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	59	Avoid excessively long variable names like startPositionXInput
9970	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	60	Avoid excessively long variable names like startPositionYInput
9971	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	67	Overridable method 'setSource' called during object construction
9972	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	72	Overridable method 'updateArcPosition' called during object construction
9973	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	73	Overridable method 'updateArcPosition' called during object construction
9974	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	78	Overridable method 'updateArcPosition' called during object construction
9975	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	81	Local variable 'labelsRequired' could be declared final
9976	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	85	Avoid excessively long variable names like startPositionXInput
9977	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	136	Avoid really long parameter lists.
9978	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	191	It is a good practice to call super() in a constructor
9979	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	208	Avoid if (x != y) ..; else ..;
9980	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	209	A method should have only one exit point, and that should be the last statement in the method
9981	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	209	Avoid using if...else statements without curly braces
9982	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	210	Avoid using if...else statements without curly braces
9983	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	236	Avoid if (x != y) ..; else ..;
9984	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	242	Local variable 'macro' could be declared final
9985	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	243	A method should have only one exit point, and that should be the last statement in the method
9986	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	247	A method should have only one exit point, and that should be the last statement in the method
9987	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	247	Avoid using if...else statements without curly braces
9988	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	248	A method should have only one exit point, and that should be the last statement in the method
9989	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	248	Avoid using if...else statements without curly braces
9990	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	250	Avoid using if...else statements without curly braces
9991	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	255	Avoid if (x != y) ..; else ..;
9992	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	262	Avoid if (x != y) ..; else ..;
9993	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	268	Local variable 'macro' could be declared final
9994	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	269	A method should have only one exit point, and that should be the last statement in the method
9995	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	281	Avoid if (x != y) ..; else ..;
9996	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	309	These nested if statements could be combined
9997	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	325	Local variable 'startPoint' could be declared final
9998	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	326	Local variable 'endPoint' could be declared final
9999	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	327	Found 'DD'-anomaly for variable 'pointX' (lines '327'-'333').
10000	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	327	Found 'DD'-anomaly for variable 'pointX' (lines '327'-'338').
10001	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	328	Found 'DD'-anomaly for variable 'pointY' (lines '328'-'344').
10002	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	328	Found 'DD'-anomaly for variable 'pointY' (lines '328'-'349').
10003	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	432	Avoid variables with short names like g
10004	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	435	Avoid variables with short names like g2
10005	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	468	The method 'updateArcPosition' has a Cyclomatic Complexity of 11.
10006	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	509	Avoid using if statements without curly braces
10007	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	511	Avoid using if statements without curly braces
10008	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	523	Avoid variables with short names like x
10009	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	523	Avoid variables with short names like y
10010	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	530	Avoid variables with short names like x
10011	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	624	clone() method should be implemented only if implementing Cloneable interface
10012	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	625	clone() method should be implemented only if implementing Cloneable interface
10013	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArc.java	625	clone() method should throw CloneNotSupportedException
10014	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	8	This class has a bunch of public methods and attributes
10015	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	32	This class has too many methods, consider refactoring it.
10016	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
10017	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
10018	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
10019	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
10020	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
10021	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	49	Avoid variables with short names like a
10022	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	49	Parameter 'a' is not assigned and could be declared final
10023	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	71	Parameter 'index' is not assigned and could be declared final
10024	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	77	Assigning an Object to null is a code smell. Consider refactoring.
10025	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Avoid variables with short names like A
10026	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Avoid variables with short names like B
10027	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Avoid variables with short names like C
10028	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Avoid variables with short names like D
10029	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Parameter 'A' is not assigned and could be declared final
10030	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Parameter 'B' is not assigned and could be declared final
10031	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	110	Parameter 'C' is not assigned and could be declared final
10032	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	111	Found 'DD'-anomaly for variable 'p' (lines '111'-'120').
10033	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	112	Local variable 'modAB' could be declared final
10034	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	113	Found 'DU'-anomaly for variable 'modCD' (lines '113'-'127').
10035	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	113	Local variable 'modCD' could be declared final
10036	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	114	Found 'DU'-anomaly for variable 'ABx' (lines '114'-'127').
10037	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	114	Local variable 'ABx' could be declared final
10038	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	115	Found 'DU'-anomaly for variable 'ABy' (lines '115'-'127').
10039	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	115	Local variable 'ABy' could be declared final
10040	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	138	Avoid using if statements without curly braces
10041	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	143	Local variable 'endIndex' could be declared final
10042	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	146	Found 'DD'-anomaly for variable 'curveStartIndex' (lines '146'-'146').
10043	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	146	Found 'DD'-anomaly for variable 'curveStartIndex' (lines '146'-'151').
10044	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	146	Found 'DU'-anomaly for variable 'curveStartIndex' (lines '146'-'181').
10045	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	147	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '147'-'147').
10046	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	147	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '147'-'154').
10047	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	147	Found 'DU'-anomaly for variable 'curveEndIndex' (lines '147'-'181').
10048	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	150	Avoid unnecessary comparisons in boolean expressions
10049	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	152	Avoid modifying an outer loop incrementer in an inner loop for update expression
10050	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	152	Avoid unnecessary comparisons in boolean expressions
10051	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	154	Found 'DD'-anomaly for variable 'curveEndIndex' (lines '154'-'154').
10052	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	159	Avoid instantiating new objects inside loops
10053	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	159	Found 'DD'-anomaly for variable 'x' (lines '159'-'164').
10054	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	159	Found 'DD'-anomaly for variable 'x' (lines '159'-'167').
10055	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	160	Avoid instantiating new objects inside loops
10056	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	160	Found 'DD'-anomaly for variable 'y' (lines '160'-'165').
10057	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	160	Found 'DD'-anomaly for variable 'y' (lines '160'-'168').
10058	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	161	Avoid instantiating new objects inside loops
10059	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	161	Found 'DD'-anomaly for variable 'X' (lines '161'-'169').
10060	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	162	Avoid instantiating new objects inside loops
10061	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	162	Found 'DD'-anomaly for variable 'Y' (lines '162'-'170').
10062	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	164	Found 'DD'-anomaly for variable 'x' (lines '164'-'164').
10063	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	164	Found 'DD'-anomaly for variable 'x' (lines '164'-'167').
10064	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	165	Found 'DD'-anomaly for variable 'y' (lines '165'-'165').
10065	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	165	Found 'DD'-anomaly for variable 'y' (lines '165'-'168').
10066	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	169	Found 'DD'-anomaly for variable 'X' (lines '169'-'161').
10067	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	169	Found 'DU'-anomaly for variable 'X' (lines '169'-'181').
10068	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	170	Found 'DD'-anomaly for variable 'Y' (lines '170'-'162').
10069	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	170	Found 'DU'-anomaly for variable 'Y' (lines '170'-'181').
10070	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	188	Found 'DD'-anomaly for variable 'myCurrentPoint' (lines '188'-'195').
10071	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	188	Found 'DU'-anomaly for variable 'myCurrentPoint' (lines '188'-'225').
10072	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	189	Avoid excessively long variable names like myPreviousButOnePoint
10073	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	189	Found 'DD'-anomaly for variable 'myPreviousButOnePoint' (lines '189'-'208').
10074	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	189	Found 'DU'-anomaly for variable 'myPreviousButOnePoint' (lines '189'-'225').
10075	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	190	Found 'DD'-anomaly for variable 'myNextPoint' (lines '190'-'215').
10076	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	190	Found 'DU'-anomaly for variable 'myNextPoint' (lines '190'-'225').
10077	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	191	Found 'DD'-anomaly for variable 'myPreviousPoint' (lines '191'-'194').
10078	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	191	Found 'DU'-anomaly for variable 'myPreviousPoint' (lines '191'-'225').
10079	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	196	Avoid unnecessary comparisons in boolean expressions
10080	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	207	Avoid unnecessary comparisons in boolean expressions
10081	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	216	Avoid unnecessary comparisons in boolean expressions
10082	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	228	Found 'DU'-anomaly for variable 'source' (lines '228'-'262').
10083	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	229	Found 'DU'-anomaly for variable 'target' (lines '229'-'262').
10084	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	230	Found 'DU'-anomaly for variable 'anAngle' (lines '230'-'262').
10085	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	232	Avoid if (x != y) ..; else ..;
10086	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	233	Avoid using if...else statements without curly braces
10087	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	234	No need to check for null before an instanceof
10088	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	303	Avoid using if statements without curly braces
10089	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	344	Avoid using for statements without curly braces
10090	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	353	Avoid using if statements without curly braces
10091	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	369	A method should have only one exit point, and that should be the last statement in the method
10092	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	369	Avoid using if...else statements without curly braces
10093	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	371	A method should have only one exit point, and that should be the last statement in the method
10094	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	371	Avoid using if...else statements without curly braces
10095	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	377	Avoid using if statements without curly braces
10096	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	378	A method should have only one exit point, and that should be the last statement in the method
10097	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	427	Found 'DD'-anomaly for variable 'gamma' (lines '427'-'443').
10098	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	428	Found 'DD'-anomaly for variable 'delta' (lines '428'-'449').
10099	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	429	Found 'DD'-anomaly for variable 'D' (lines '429'-'455').
10100	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	443	Found 'DD'-anomaly for variable 'gamma' (lines '443'-'445').
10101	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	443	Found 'DD'-anomaly for variable 'gamma' (lines '443'-'447').
10102	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	449	Found 'DD'-anomaly for variable 'delta' (lines '449'-'451').
10103	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	449	Found 'DD'-anomaly for variable 'delta' (lines '449'-'453').
10104	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	455	Found 'DD'-anomaly for variable 'D' (lines '455'-'457').
10105	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	455	Found 'DU'-anomaly for variable 'D' (lines '455'-'467').
10106	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	461	Found 'DD'-anomaly for variable 'C' (lines '461'-'463').
10107	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	463	Avoid instantiating new objects inside loops
10108	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	463	Found 'DD'-anomaly for variable 'C' (lines '463'-'463').
10109	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	520	Found 'DD'-anomaly for variable 'details' (lines '520'-'522').
10110	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	522	Found 'DD'-anomaly for variable 'details' (lines '522'-'523').
10111	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	523	Found 'DD'-anomaly for variable 'details' (lines '523'-'524').
10112	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	524	Found 'DD'-anomaly for variable 'details' (lines '524'-'522').
10113	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	569	Found 'DD'-anomaly for variable 'distances' (lines '569'-'575').
10114	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	575	Found 'DD'-anomaly for variable 'distances' (lines '575'-'575').
10115	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	578	Found 'DU'-anomaly for variable 'shortest' (lines '578'-'595').
10116	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	579	Found 'DD'-anomaly for variable 'wantedpoint' (lines '579'-'583').
10117	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	582	Found 'DU'-anomaly for variable 'shortest' (lines '582'-'595').
10118	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	583	Found 'DD'-anomaly for variable 'wantedpoint' (lines '583'-'583').
10119	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	610	Avoid if (x != y) ..; else ..;
10120	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	611	Avoid using if...else statements without curly braces
10121	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	613	Avoid using if...else statements without curly braces
10122	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	615	Avoid if (x != y) ..; else ..;
10123	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	634	A method should have only one exit point, and that should be the last statement in the method
10124	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	636	Avoid printStackTrace(); use a logger call instead.
10125	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPath.java	647	Use explicit scoping instead of the default package private level
10126	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
10127	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	30	This final field could be made static
10128	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
10129	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
10130	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
10131	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
10132	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	40	Avoid variables with short names like a
10133	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	40	Parameter '_pointType' is not assigned and could be declared final
10134	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	40	Parameter 'a' is not assigned and could be declared final
10135	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	40	Parameter 'point' is not assigned and could be declared final
10136	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	44	Avoid variables with short names like a
10137	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	44	Avoid variables with short names like x
10138	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	44	Avoid variables with short names like y
10139	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	44	Parameter '_pointType' is not assigned and could be declared final
10140	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	44	Parameter 'a' is not assigned and could be declared final
10141	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	46	Overridable method 'setPointLocation' called during object construction
10142	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	50	Avoid variables with short names like x
10143	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	50	It is a good practice to call super() in a constructor
10144	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	51	Overridable method 'setPointLocation' called during object construction
10145	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	55	It is a good practice to call super() in a constructor
10146	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	58	Avoid using if statements without curly braces
10147	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	64	Overridable method 'setPointLocation' called during object construction
10148	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	90	A getX() method which returns a boolean should be named isX()
10149	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	107	Use bitwise inversion to invert boolean values
10150	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	119	Avoid using if...else statements without curly braces
10151	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	119	Found 'DD'-anomaly for variable 'angle' (lines '119'-'125').
10152	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	121	Avoid using if...else statements without curly braces
10153	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	121	Found 'DD'-anomaly for variable 'angle' (lines '121'-'125').
10154	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	124	Avoid using if statements without curly braces
10155	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	133	Avoid using if...else statements without curly braces
10156	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	133	Found 'DD'-anomaly for variable 'angle' (lines '133'-'139').
10157	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	135	Avoid using if...else statements without curly braces
10158	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	135	Found 'DD'-anomaly for variable 'angle' (lines '135'-'139').
10159	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	138	Avoid using if statements without curly braces
10160	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	147	Local variable 'g2' could be declared final
10161	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	150	Avoid using if...else statements without curly braces
10162	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	170	Avoid using for statements without curly braces
10163	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	171	Avoid using if statements without curly braces
10164	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	172	A method should have only one exit point, and that should be the last statement in the method
10165	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	186	Local variable 'i' could be declared final
10166	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	187	Local variable 'newpoint' could be declared final
10167	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	198	Local variable 'i' could be declared final
10168	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	251	Local variable 'x' could be declared final
10169	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	259	Document empty method
10170	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeArcPathPoint.java	264	Avoid excessively long variable names like clonedArcPathPoint
10171	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	40	Abstract classes should be named AbstractXXX
10172	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	40	The class 'PerformanceTreeNode' has a Cyclomatic Complexity of 2 (Highest = 14).
10173	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	41	This class has too many methods, consider refactoring it.
10174	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	55	Found non-transient, non-static member. Please mark as transient or provide accessors.
10175	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	56	Found non-transient, non-static member. Please mark as transient or provide accessors.
10176	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	58	Found non-transient, non-static member. Please mark as transient or provide accessors.
10177	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
10178	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
10179	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	64	Avoid using implementation types like 'ArrayList'; use the interface instead
10180	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	64	Avoid using implementation types like 'ArrayList'; use the interface instead
10181	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	67	Variables that are final and static should be in all caps.
10182	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	74	Overridable method 'setNodeType' called during object construction
10183	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	75	Overridable method 'updateBounds' called during object construction
10184	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	80	Overridable method 'updateBounds' called during object construction
10185	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	85	Overridable method 'updateBounds' called during object construction
10186	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	94	Assigning an Object to null is a code smell. Consider refactoring.
10187	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	109	This statement may have some unnecessary parentheses
10188	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	124	Assigning an Object to null is a code smell. Consider refactoring.
10189	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	129	Avoid if (x != y) ..; else ..;
10190	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	133	Avoid if (x != y) ..; else ..;
10191	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	134	A method should have only one exit point, and that should be the last statement in the method
10192	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	134	Avoid using if...else statements without curly braces
10193	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	135	A method should have only one exit point, and that should be the last statement in the method
10194	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	135	Avoid using if...else statements without curly braces
10195	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	139	Avoid if (x != y) ..; else ..;
10196	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	140	A method should have only one exit point, and that should be the last statement in the method
10197	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	140	Avoid using if...else statements without curly braces
10198	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	141	A method should have only one exit point, and that should be the last statement in the method
10199	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	141	Avoid using if...else statements without curly braces
10200	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	144	Avoid using if...else statements without curly braces
10201	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	149	Avoid if (x != y) ..; else ..;
10202	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	155	Local variable 'parentNode' could be declared final
10203	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	156	A method should have only one exit point, and that should be the last statement in the method
10204	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	156	Consider simply returning the value vs storing it in local variable 'parentNode'
10205	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	200	Avoid variables with short names like g
10206	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	204	Avoid variables with short names like g2
10207	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	204	Local variable 'g2' could be declared final
10208	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	205	Local variable 'saveXform' could be declared final
10209	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	206	Local variable 'scaledXform' could be declared final
10210	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	229	Avoid using if statements without curly braces
10211	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	233	Avoid using if statements without curly braces
10212	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	235	Local variable 'nodeImageWidth' could be declared final
10213	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	248	System.out.print is used
10214	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	256	Found 'DD'-anomaly for variable 'match' (lines '256'-'263').
10215	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	275	Avoid really long methods.
10216	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	275	The method 'updateEndPoints' has a Cyclomatic Complexity of 14.
10217	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	275	The method updateEndPoints() has an NPath complexity of 810
10218	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	277	Found 'DD'-anomaly for variable 'arcIterator' (lines '277'-'283').
10219	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	352	Found 'DD'-anomaly for variable 'current' (lines '352'-'368').
10220	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	356	Avoid instantiating new objects inside loops
10221	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	368	Found 'DU'-anomaly for variable 'current' (lines '368'-'381').
10222	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	373	Avoid instantiating new objects inside loops
10223	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	384	Avoid variables with short names like x
10224	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	384	Avoid variables with short names like y
10225	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	393	Avoid if (x != y) ..; else ..;
10226	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	499	Avoid variables with short names like x
10227	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	512	Avoid using if statements without curly braces
10228	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	528	Found 'DD'-anomaly for variable 'scaleFactor' (lines '528'-'531').
10229	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	582	An empty method in an abstract class should be abstract instead
10230	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	593	clone() method should be implemented only if implementing Cloneable interface
10231	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	594	clone() method should be implemented only if implementing Cloneable interface
10232	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	594	clone() method should throw CloneNotSupportedException
10233	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	597	Consider simply returning the value vs storing it in local variable 'nodeCopy'
10234	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	604	Use explicit scoping instead of the default package private level
10235	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	606	Use explicit scoping instead of the default package private level
10236	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	611	Overridable method 'calcAngle' called during object construction
10237	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	620	Use explicit scoping instead of the default package private level
10238	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	634	Avoid using if statements without curly braces
10239	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeNode.java	638	Avoid using if statements without curly braces
10240	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	26	This class has too many methods, consider refactoring it.
10241	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	28	Avoid variables with short names like id
10242	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
10243	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
10244	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
10245	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	37	Avoid excessively long variable names like selectionBorderColour
10246	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
10247	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
10248	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	41	It is somewhat confusing to have a field name with the same name as a method
10249	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	49	Parameter 'idInput' is not assigned and could be declared final
10250	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	49	Parameter 'positionXInput' is not assigned and could be declared final
10251	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	49	Parameter 'positionYInput' is not assigned and could be declared final
10252	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	54	It is a good practice to call super() in a constructor
10253	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	54	Parameter 'positionXInput' is not assigned and could be declared final
10254	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	54	Parameter 'positionYInput' is not assigned and could be declared final
10255	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	56	Avoid using if statements without curly braces
10256	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	57	Overridable method 'addZoomController' called during object construction
10257	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	60	Overridable method 'addZoomController' called during object construction
10258	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	62	Overridable method 'setPositionX' called during object construction
10259	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	63	Overridable method 'setPositionY' called during object construction
10260	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	66	It is a good practice to call super() in a constructor
10261	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	70	Document empty constructor
10262	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	70	It is a good practice to call super() in a constructor
10263	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	92	Avoid if (x != y) ..; else ..;
10264	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	110	Avoid if (x != y) ..; else ..;
10265	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	118	Avoid variables with short names like c
10266	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	122	Avoid variables with short names like c
10267	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	154	Avoid using if...else statements without curly braces
10268	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	156	Avoid using if...else statements without curly braces
10269	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	162	Avoid variables with short names like c
10270	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	162	Local variable 'c' could be declared final
10271	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	163	Avoid using if statements without curly braces
10272	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	180	Avoid variables with short names like x
10273	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	199	Overriding method merely calls super
10274	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	203	clone() method should throw CloneNotSupportedException
10275	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	205	Local variable 'ptObjectCopy' could be declared final
10276	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	206	A method should have only one exit point, and that should be the last statement in the method
10277	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	206	Consider simply returning the value vs storing it in local variable 'ptObjectCopy'
10278	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	208	Avoid printStackTrace(); use a logger call instead.
10279	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	216	Document empty method
10280	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	219	Document empty method
10281	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObject.java	222	Document empty method
10282	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	19	Avoid variables with short names like id
10283	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
10284	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
10285	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
10286	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
10287	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
10288	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	29	Parameter 'idInput' is not assigned and could be declared final
10289	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	29	Parameter 'positionXInput' is not assigned and could be declared final
10290	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	29	Parameter 'positionYInput' is not assigned and could be declared final
10291	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	29	Parameter 'text' is not assigned and could be declared final
10292	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	37	Parameter 'text' is not assigned and could be declared final
10293	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	64	Avoid variables with short names like x
10294	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	64	Avoid variables with short names like y
10295	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	80	Avoid variables with short names like x
10296	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	80	Avoid variables with short names like y
10297	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	84	A getX() method which returns a boolean should be named isX()
10298	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	97	Avoid using if...else statements without curly braces
10299	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	100	clone() method should throw CloneNotSupportedException
10300	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	102	A method should have only one exit point, and that should be the last statement in the method
10301	src/pipe/modules/queryeditor/gui/performancetrees/PerformanceTreeObjectLabel.java	104	Avoid printStackTrace(); use a logger call instead.
10302	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	21	Parameter 'idInput' is not assigned and could be declared final
10303	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	21	Parameter 'positionXInput' is not assigned and could be declared final
10304	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	21	Parameter 'positionYInput' is not assigned and could be declared final
10305	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	26	Parameter 'positionXInput' is not assigned and could be declared final
10306	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	26	Parameter 'positionYInput' is not assigned and could be declared final
10307	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	40	Assigning an Object to null is a code smell. Consider refactoring.
10308	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	62	Avoid if (x != y) ..; else ..;
10309	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	63	Avoid using if...else statements without curly braces
10310	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	63	Prefer StringBuffer over += for concatenating strings
10311	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	65	Avoid using if...else statements without curly braces
10312	src/pipe/modules/queryeditor/gui/performancetrees/macros/ArgumentNode.java	65	Prefer StringBuffer over += for concatenating strings
10313	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	26	The class 'MacroDefinition' has a Cyclomatic Complexity of 3 (Highest = 13).
10314	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
10315	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
10316	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
10317	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
10318	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
10319	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
10320	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	33	Avoid using implementation types like 'ArrayList'; use the interface instead
10321	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	33	Avoid using implementation types like 'ArrayList'; use the interface instead
10322	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
10323	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	37	It is a good practice to call super() in a constructor
10324	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	39	Assigning an Object to null is a code smell. Consider refactoring.
10325	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	40	Assigning an Object to null is a code smell. Consider refactoring.
10326	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	88	Local variable 'topNode' could be declared final
10327	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	89	Avoid unused local variables such as 'topNodeID'.
10328	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	89	Found 'DU'-anomaly for variable 'topNodeID' (lines '89'-'105').
10329	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	89	Local variable 'topNodeID' could be declared final
10330	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	91	Avoid excessively long variable names like topNodesOutgoingArcIDs
10331	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	91	Local variable 'topNodesOutgoingArcIDs' could be declared final
10332	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	92	Avoid variables with short names like i
10333	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	92	Local variable 'i' could be declared final
10334	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	93	Local variable 'topNodesArcID' could be declared final
10335	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	98	Avoid excessively long variable names like topNodesArcsTargetID
10336	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	100	Avoid excessively long variable names like topNodesChildNodesReturnType
10337	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	101	A method should have only one exit point, and that should be the last statement in the method
10338	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	101	Consider simply returning the value vs storing it in local variable 'topNodesChildNodesReturnType'
10339	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	136	Avoid using implementation types like 'HashMap'; use the interface instead
10340	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	136	Avoid using implementation types like 'HashMap'; use the interface instead
10341	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	139	Avoid variables with short names like i
10342	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	151	Avoid excessively long variable names like retrievedNodesIncomingArc
10343	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	153	Avoid excessively long variable names like retrievedNodesParent
10344	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	156	Found 'DD'-anomaly for variable 'retrievedNodesParentsOptionalChildNodes' (lines '156'-'156').
10345	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	156	Found 'DU'-anomaly for variable 'retrievedNodesParentsOptionalChildNodes' (lines '156'-'196').
10346	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	158	Found 'DD'-anomaly for variable 'argumentRequired' (lines '158'-'158').
10347	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	158	Found 'DU'-anomaly for variable 'argumentRequired' (lines '158'-'196').
10348	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	163	Avoid instantiating new objects inside loops
10349	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	165	Avoid instantiating new objects inside loops
10350	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	172	Avoid instantiating new objects inside loops
10351	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	179	Avoid instantiating new objects inside loops
10352	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	181	Avoid instantiating new objects inside loops
10353	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	185	Deeply nested if..then statements are hard to read
10354	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	201	Avoid using implementation types like 'ArrayList'; use the interface instead
10355	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	201	Avoid using implementation types like 'ArrayList'; use the interface instead
10356	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	204	Avoid using implementation types like 'ArrayList'; use the interface instead
10357	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	204	Avoid using implementation types like 'ArrayList'; use the interface instead
10358	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	219	A getX() method which returns a boolean should be named isX()
10359	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	237	Avoid variables with short names like i
10360	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	242	Avoid using if statements without curly braces
10361	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	243	A method should have only one exit point, and that should be the last statement in the method
10362	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	253	The method 'addMacroNode' has a Cyclomatic Complexity of 13.
10363	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	255	Found 'DD'-anomaly for variable 'unique' (lines '255'-'270').
10364	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	255	Found 'DU'-anomaly for variable 'unique' (lines '255'-'332').
10365	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	261	Avoid variables with short names like i
10366	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	270	Found 'DD'-anomaly for variable 'unique' (lines '270'-'270').
10367	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	300	Avoid variables with short names like it
10368	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	328	A method should have only one exit point, and that should be the last statement in the method
10369	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	391	Avoid using if statements without curly braces
10370	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	391	These nested if statements could be combined
10371	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	434	Avoid using if statements without curly braces
10372	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	435	A method should have only one exit point, and that should be the last statement in the method
10373	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	448	Found 'DD'-anomaly for variable 'unique' (lines '448'-'463').
10374	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	448	Found 'DU'-anomaly for variable 'unique' (lines '448'-'491').
10375	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	463	Found 'DD'-anomaly for variable 'unique' (lines '463'-'463').
10376	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	487	A method should have only one exit point, and that should be the last statement in the method
10377	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	555	The method 'printMacroDefintionContents' has a Cyclomatic Complexity of 12.
10378	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	558	System.out.print is used
10379	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	559	System.out.print is used
10380	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	560	System.out.print is used
10381	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	561	System.out.print is used
10382	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	570	System.out.print is used
10383	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	570	The String literal " and type " appears 5 times in this file; the first occurrence is on line 570
10384	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroDefinition.java	582	These nested if statements could be combined
10385	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	11	A high number of imports can indicate a high degree of coupling within an object.
10386	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	106	Avoid really long classes.
10387	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	106	The class 'MacroEditor' has a Cyclomatic Complexity of 4 (Highest = 30).
10388	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	107	This class has too many methods, consider refactoring it.
10389	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	111	Use explicit scoping instead of the default package private level
10390	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	113	Found non-transient, non-static member. Please mark as transient or provide accessors.
10391	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	113	Use explicit scoping instead of the default package private level
10392	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	114	Found non-transient, non-static member. Please mark as transient or provide accessors.
10393	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	117	Found non-transient, non-static member. Please mark as transient or provide accessors.
10394	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	118	Found non-transient, non-static member. Please mark as transient or provide accessors.
10395	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	119	Found non-transient, non-static member. Please mark as transient or provide accessors.
10396	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	120	Perhaps 'toolBar1' could be replaced by a local variable.
10397	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	121	Avoid excessively long variable names like macroDescriptionTextField
10398	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	121	Avoid excessively long variable names like macroNameTextField
10399	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	124	Variables that are final and static should be in all caps.
10400	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	125	Variables that are final and static should be in all caps.
10401	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	126	Variables that are final and static should be in all caps.
10402	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	127	Variables that are final and static should be in all caps.
10403	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	128	Variables that are final and static should be in all caps.
10404	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	145	Avoid unused private fields such as 'argumentDialog'.
10405	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	146	Avoid unused private fields such as 'argumentNode'.
10406	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	154	Local variable 'minFrameSize' could be declared final
10407	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	155	Local variable 'prefFrameSize' could be declared final
10408	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	176	Local variable 'macroName' could be declared final
10409	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	187	The String literal "Draw Select" appears 4 times in this file; the first occurrence is on line 186
10410	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	199	Local variable 'fileName' could be declared final
10411	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	201	Local variable 'inFile' could be declared final
10412	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	242	Avoid printStackTrace(); use a logger call instead.
10413	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	247	Avoid really long methods.
10414	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	257	The String literal "XML" appears 4 times in this file; the first occurrence is on line 256
10415	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	258	The String literal "EPS" appears 4 times in this file; the first occurrence is on line 257
10416	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	259	The String literal "PNG" appears 4 times in this file; the first occurrence is on line 258
10417	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	261	The String literal "Print" appears 4 times in this file; the first occurrence is on line 260
10418	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	293	Avoid excessively long variable names like macroInfoPanelHeight
10419	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	300	Avoid excessively long variable names like macroBuilderButtonsPanel
10420	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	303	Avoid excessively long variable names like queryBuilderToolbars
10421	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	350	This statement may have some unnecessary parentheses
10422	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	388	Avoid really long methods.
10423	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	404	Avoid instantiating Boolean objects; reference Boolean.TRUE or Boolean.FALSE or call Boolean.valueOf() instead.
10424	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	532	Avoid using if statements without curly braces
10425	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	537	Avoid unused private methods such as 'addZoomMenuItems(JMenu)'.
10426	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	541	Avoid instantiating new objects inside loops
10427	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	550	This statement may have some unnecessary parentheses
10428	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	552	No need to call String.valueOf to append to a string.
10429	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	586	Avoid variables with short names like o
10430	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	588	Avoid using if statements without curly braces
10431	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	606	Found 'DD'-anomaly for variable 'nextAction' (lines '798'-'798').
10432	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	606	Found 'DD'-anomaly for variable 'nextAction' (lines '798'-'802').
10433	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	606	Found 'DU'-anomaly for variable 'nextAction' (lines '798'-'809').
10434	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	611	Use equals() to compare object references.
10435	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	638	A method should have only one exit point, and that should be the last statement in the method
10436	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	638	Avoid using if...else statements without curly braces
10437	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	640	A method should have only one exit point, and that should be the last statement in the method
10438	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	640	Avoid using if...else statements without curly braces
10439	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	641	Avoid using if...else statements without curly braces
10440	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	647	Avoid using if...else statements without curly braces
10441	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	648	Avoid using if statements without curly braces
10442	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	654	Avoid if (x != y) ..; else ..;
10443	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	655	A method should have only one exit point, and that should be the last statement in the method
10444	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	655	Avoid using if...else statements without curly braces
10445	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	661	Avoid using if statements without curly braces
10446	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	672	Avoid if (x != y) ..; else ..;
10447	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	673	A method should have only one exit point, and that should be the last statement in the method
10448	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	692	Avoid if (x != y) ..; else ..;
10449	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	693	A method should have only one exit point, and that should be the last statement in the method
10450	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	699	Avoid if (x != y) ..; else ..;
10451	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	704	Use explicit scoping instead of the default package private level
10452	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	706	Avoid really long methods.
10453	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	706	Parameter 'event' is not assigned and could be declared final
10454	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	706	The method 'actionPerformed' has a Cyclomatic Complexity of 19.
10455	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	772	Avoid printStackTrace(); use a logger call instead.
10456	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	775	Avoid unnecessary comparisons in boolean expressions
10457	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	802	Avoid using if statements without curly braces
10458	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	853	Found 'DD'-anomaly for variable 'stringContainsText' (lines '1,045'-'1,052').
10459	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	860	Found 'DD'-anomaly for variable 'stringContainsText' (lines '1,052'-'1,052').
10460	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	868	Found 'DD'-anomaly for variable 'stringContainsText' (lines '1,060'-'1,067').
10461	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	875	Found 'DD'-anomaly for variable 'stringContainsText' (lines '1,067'-'1,067').
10462	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	888	The method 'macroTreeValid' has a Cyclomatic Complexity of 20.
10463	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	893	Avoid if (x != y) ..; else ..;
10464	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	896	Avoid variables with short names like i
10465	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	904	These nested if statements could be combined
10466	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	919	Avoid variables with short names like j
10467	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	971	These nested if statements could be combined
10468	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1070	Avoid printStackTrace(); use a logger call instead.
10469	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1193	Found 'DU'-anomaly for variable 'currentXNoZoom' (lines '1,385'-'1,446').
10470	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1194	Found 'DU'-anomaly for variable 'currentYNoZoom' (lines '1,386'-'1,446').
10471	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1196	Found 'DD'-anomaly for variable 'selection' (lines '1,388'-'1,406').
10472	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1196	Found 'DD'-anomaly for variable 'selection' (lines '1,388'-'1,409').
10473	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1196	Found 'DU'-anomaly for variable 'selection' (lines '1,388'-'1,446').
10474	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1197	Found 'DD'-anomaly for variable 'strToTest' (lines '1,389'-'1,412').
10475	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1197	Found 'DU'-anomaly for variable 'strToTest' (lines '1,389'-'1,446').
10476	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1214	Found 'DD'-anomaly for variable 'selection' (lines '1,406'-'1,409').
10477	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroEditor.java	1260	Found 'DD'-anomaly for variable 'toTest' (lines '1,452'-'1,456').
10478	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	13	A high number of imports can indicate a high degree of coupling within an object.
10479	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	59	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
10480	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	59	The class 'MacroManager' has a Cyclomatic Complexity of 3 (Highest = 17).
10481	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	59	This class has too many methods, consider refactoring it.
10482	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	62	Avoid using implementation types like 'ArrayList'; use the interface instead
10483	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	62	Avoid using implementation types like 'ArrayList'; use the interface instead
10484	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	84	Parameter '_mode' is not assigned and could be declared final
10485	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	100	Parameter 'nodeInput' is not assigned and could be declared final
10486	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	108	Local variable 'contentPane' could be declared final
10487	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	111	Local variable 'buttonNames' could be declared final
10488	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	112	Local variable 'okButtonListener' could be declared final
10489	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	113	Parameter 'arg0' is not assigned and could be declared final
10490	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	114	Avoid excessively long variable names like macroListSelectedIndices
10491	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	133	The String literal "Warning" appears 7 times in this file; the first occurrence is on line 133
10492	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	138	Avoid excessively long variable names like cancelButtonListener
10493	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	138	Local variable 'cancelButtonListener' could be declared final
10494	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	139	Parameter 'arg0' is not assigned and could be declared final
10495	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	144	Local variable 'buttonListeners' could be declared final
10496	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	150	Avoid variables with short names like we
10497	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	150	Parameter 'we' is not assigned and could be declared final
10498	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	170	Assigning an Object to null is a code smell. Consider refactoring.
10499	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	171	Assigning an Object to null is a code smell. Consider refactoring.
10500	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	187	Avoid variables with short names like i
10501	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	201	Avoid if (x != y) ..; else ..;
10502	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	203	Avoid using if statements without curly braces
10503	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	208	Avoid using if...else statements without curly braces
10504	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	218	Avoid if (x != y) ..; else ..;
10505	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	219	A method should have only one exit point, and that should be the last statement in the method
10506	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	219	Avoid using if...else statements without curly braces
10507	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	221	Avoid using if...else statements without curly braces
10508	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	246	Avoid variables with short names like i
10509	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	250	Avoid excessively long variable names like acceptableChildNodeTypes
10510	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	254	Avoid using if...else statements without curly braces
10511	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	256	Avoid using if...else statements without curly braces
10512	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	273	Avoid unused private methods such as 'printOutgoingArcInfo(String,ArrayList,boolean)'.
10513	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	273	Avoid using implementation types like 'ArrayList'; use the interface instead
10514	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	273	Avoid using implementation types like 'ArrayList'; use the interface instead
10515	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	274	System.out.print is used
10516	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	275	System.out.print is used
10517	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	277	System.out.print is used
10518	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	279	System.out.print is used
10519	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	280	Avoid variables with short names like i
10520	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	283	System.out.print is used
10521	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	291	Avoid excessively long variable names like showMacroManagerButtons
10522	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	291	Avoid really long methods.
10523	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	291	The method 'getMacroAssignmentManagerPanel' has a Cyclomatic Complexity of 17.
10524	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	291	The method getMacroAssignmentManagerPanel() has an NCSS line count of 105
10525	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	292	Avoid excessively long variable names like macroAssignmentManagerPanel
10526	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	293	This statement may have some unnecessary parentheses
10527	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	300	Found 'DD'-anomaly for variable 'createMacroButton' (lines '300'-'307').
10528	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	300	Found 'DD'-anomaly for variable 'createMacroButton' (lines '300'-'307').
10529	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	300	Found 'DD'-anomaly for variable 'createMacroButton' (lines '300'-'307').
10530	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	300	Found 'DD'-anomaly for variable 'createMacroButton' (lines '300'-'307').
10531	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	300	Found 'DD'-anomaly for variable 'createMacroButton' (lines '300'-'307').
10532	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DD'-anomaly for variable 'editMacroButton' (lines '301'-'319').
10533	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DD'-anomaly for variable 'editMacroButton' (lines '301'-'319').
10534	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DD'-anomaly for variable 'editMacroButton' (lines '301'-'319').
10535	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DD'-anomaly for variable 'editMacroButton' (lines '301'-'319').
10536	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DD'-anomaly for variable 'editMacroButton' (lines '301'-'319').
10537	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DU'-anomaly for variable 'editMacroButton' (lines '301'-'484').
10538	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DU'-anomaly for variable 'editMacroButton' (lines '301'-'484').
10539	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DU'-anomaly for variable 'editMacroButton' (lines '301'-'484').
10540	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DU'-anomaly for variable 'editMacroButton' (lines '301'-'484').
10541	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	301	Found 'DU'-anomaly for variable 'editMacroButton' (lines '301'-'484').
10542	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DD'-anomaly for variable 'deleteMacroButton' (lines '302'-'400').
10543	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DD'-anomaly for variable 'deleteMacroButton' (lines '302'-'400').
10544	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DD'-anomaly for variable 'deleteMacroButton' (lines '302'-'400').
10545	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DD'-anomaly for variable 'deleteMacroButton' (lines '302'-'400').
10546	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DD'-anomaly for variable 'deleteMacroButton' (lines '302'-'400').
10547	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DU'-anomaly for variable 'deleteMacroButton' (lines '302'-'484').
10548	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DU'-anomaly for variable 'deleteMacroButton' (lines '302'-'484').
10549	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DU'-anomaly for variable 'deleteMacroButton' (lines '302'-'484').
10550	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DU'-anomaly for variable 'deleteMacroButton' (lines '302'-'484').
10551	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	302	Found 'DU'-anomaly for variable 'deleteMacroButton' (lines '302'-'484').
10552	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DD'-anomaly for variable 'importMacroButton' (lines '303'-'363').
10553	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DD'-anomaly for variable 'importMacroButton' (lines '303'-'363').
10554	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DD'-anomaly for variable 'importMacroButton' (lines '303'-'363').
10555	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DD'-anomaly for variable 'importMacroButton' (lines '303'-'363').
10556	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DD'-anomaly for variable 'importMacroButton' (lines '303'-'363').
10557	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DU'-anomaly for variable 'importMacroButton' (lines '303'-'484').
10558	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DU'-anomaly for variable 'importMacroButton' (lines '303'-'484').
10559	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DU'-anomaly for variable 'importMacroButton' (lines '303'-'484').
10560	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DU'-anomaly for variable 'importMacroButton' (lines '303'-'484').
10561	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	303	Found 'DU'-anomaly for variable 'importMacroButton' (lines '303'-'484').
10562	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	335	Avoid if (x != y) ..; else ..;
10563	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	380	Avoid printStackTrace(); use a logger call instead.
10564	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	408	Avoid if (x != y) ..; else ..;
10565	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	415	Avoid using if statements without curly braces
10566	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	453	This statement may have some unnecessary parentheses
10567	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	470	This statement may have some unnecessary parentheses
10568	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	487	Avoid variables with short names like in
10569	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	487	Found 'DD'-anomaly for variable 'in' (lines '487'-'489').
10570	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	487	Found 'DD'-anomaly for variable 'out' (lines '487'-'490').
10571	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	495	Avoid using if statements without curly braces
10572	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	496	Avoid using if statements without curly braces
10573	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	511	These nested if statements could be combined
10574	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	513	Avoid using if statements without curly braces
10575	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	514	A method should have only one exit point, and that should be the last statement in the method
10576	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	573	Assigning an Object to null is a code smell. Consider refactoring.
10577	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	577	Avoid if (x != y) ..; else ..;
10578	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	578	A method should have only one exit point, and that should be the last statement in the method
10579	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	608	Found non-transient, non-static member. Please mark as transient or provide accessors.
10580	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	608	Use explicit scoping instead of the default package private level
10581	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	610	Avoid unnecessary constructors - the compiler will generate these for you
10582	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	610	Document empty constructor
10583	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	610	It is a good practice to call super() in a constructor
10584	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroManager.java	625	Avoid unnecessary comparisons in boolean expressions
10585	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
10586	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	33	Parameter 'idInput' is not assigned and could be declared final
10587	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	33	Parameter 'positionXInput' is not assigned and could be declared final
10588	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	33	Parameter 'positionYInput' is not assigned and could be declared final
10589	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	38	Parameter 'positionXInput' is not assigned and could be declared final
10590	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	38	Parameter 'positionYInput' is not assigned and could be declared final
10591	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	54	Found 'DD'-anomaly for variable 'description' (lines '54'-'83').
10592	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	55	Found 'DU'-anomaly for variable 'children' (lines '55'-'99').
10593	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	55	Local variable 'children' could be declared final
10594	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	58	Avoid variables with short names like op
10595	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	58	Found 'DU'-anomaly for variable 'op' (lines '58'-'99').
10596	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	58	Local variable 'op' could be declared final
10597	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	60	Avoid unused local variables such as 'macroDescription'.
10598	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	60	Found 'DU'-anomaly for variable 'macroDescription' (lines '60'-'99').
10599	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	60	Local variable 'macroDescription' could be declared final
10600	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	62	Prefer StringBuffer over += for concatenating strings
10601	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	63	Avoid if (x != y) ..; else ..;
10602	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	64	Prefer StringBuffer over += for concatenating strings
10603	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	65	Avoid variables with short names like i
10604	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	65	Local variable 'i' could be declared final
10605	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	67	Local variable 'child' could be declared final
10606	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	69	Prefer StringBuffer over += for concatenating strings
10607	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	71	Avoid using if statements without curly braces
10608	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	72	Prefer StringBuffer over += for concatenating strings
10609	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	76	Prefer StringBuffer over += for concatenating strings
10610	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	79	A method should have only one exit point, and that should be the last statement in the method
10611	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	119	A method should have only one exit point, and that should be the last statement in the method
10612	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	119	Avoid using if...else statements without curly braces
10613	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	121	Avoid using if...else statements without curly braces
10614	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	134	Avoid using if statements without curly braces
10615	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	139	Avoid using if statements without curly braces
10616	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	140	System.out.print is used
10617	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	142	Avoid excessively long variable names like nodeLabelPositionX
10618	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	143	Avoid excessively long variable names like nodeLabelPositionY
10619	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	150	Avoid if (x != y) ..; else ..;
10620	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	171	Avoid really long methods.
10621	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	182	Avoid excessively long variable names like arcConnectionPointX
10622	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	183	Avoid excessively long variable names like arcConnectionPointY
10623	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	192	Found 'DU'-anomaly for variable 'arcStartPointX' (lines '192'-'292').
10624	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	194	Found 'DU'-anomaly for variable 'arcEndPointY' (lines '194'-'292').
10625	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	203	Found 'DU'-anomaly for variable 'arcEndPointX' (lines '203'-'292').
10626	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	209	Found 'DU'-anomaly for variable 'arcEndPointX' (lines '209'-'292').
10627	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	216	Avoid instantiating new objects inside loops
10628	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	256	Avoid instantiating new objects inside loops
10629	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	294	Avoid variables with short names like g
10630	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	296	Avoid variables with short names like g2
10631	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	300	Avoid using if statements without curly braces
10632	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	301	Avoid using if statements without curly braces
10633	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroNode.java	301	These nested if statements could be combined
10634	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	10	A high number of imports can indicate a high degree of coupling within an object.
10635	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	72	This class has too many methods, consider refactoring it.
10636	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	75	Found non-transient, non-static member. Please mark as transient or provide accessors.
10637	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	75	Use explicit scoping instead of the default package private level
10638	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	77	Avoid unused private fields such as 'macroName'.
10639	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	77	Found non-transient, non-static member. Please mark as transient or provide accessors.
10640	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	77	Perhaps 'macroName' could be replaced by a local variable.
10641	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	79	Found non-transient, non-static member. Please mark as transient or provide accessors.
10642	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	81	Found non-transient, non-static member. Please mark as transient or provide accessors.
10643	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	81	Use explicit scoping instead of the default package private level
10644	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	82	Found non-transient, non-static member. Please mark as transient or provide accessors.
10645	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	85	It is a good practice to call super() in a constructor
10646	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	93	Local variable 'handler' could be declared final
10647	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	104	Local variable 'canvasWidth' could be declared final
10648	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	105	Local variable 'canvasHeight' could be declared final
10649	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	106	Local variable 'xLoc' could be declared final
10650	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	107	Local variable 'yLoc' could be declared final
10651	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	151	System.out.print is used
10652	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	152	System.out.print is used
10653	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	158	System.out.print is used
10654	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	159	System.out.print is used
10655	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	160	Avoid variables with short names like i
10656	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	165	System.out.print is used
10657	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	174	Avoid variables with short names like j
10658	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	184	Avoid variables with short names like k
10659	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	191	Avoid using if statements without curly braces
10660	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	194	Avoid using if statements without curly braces
10661	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	220	Avoid variables with short names like l
10662	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	230	Deeply nested if..then statements are hard to read
10663	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	239	Deeply nested if..then statements are hard to read
10664	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	255	Avoid variables with short names like c
10665	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	265	Avoid using if...else statements without curly braces
10666	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	266	Avoid using if statements without curly braces
10667	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	276	Avoid using for statements without curly braces
10668	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	286	No need to check for null before an instanceof
10669	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	317	Avoid using if statements without curly braces
10670	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	322	Avoid using if statements without curly braces
10671	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	338	Position literals first in String comparisons
10672	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	339	Avoid using if...else statements without curly braces
10673	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	340	Position literals first in String comparisons
10674	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	341	Avoid using if...else statements without curly braces
10675	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	342	Position literals first in String comparisons
10676	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	359	A method should have only one exit point, and that should be the last statement in the method
10677	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	389	The class 'MouseHandler' has a Cyclomatic Complexity of 12 (Highest = 28).
10678	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	393	Use explicit scoping instead of the default package private level
10679	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	396	Avoid really long methods.
10680	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	396	The method 'mousePressed' has a Cyclomatic Complexity of 28.
10681	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'408').
10682	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'413').
10683	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'417').
10684	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'421').
10685	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'426').
10686	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'430').
10687	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'434').
10688	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'438').
10689	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'442').
10690	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'447').
10691	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'452').
10692	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'456').
10693	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'460').
10694	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'464').
10695	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'467').
10696	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'471').
10697	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'475').
10698	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'479').
10699	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'483').
10700	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'487').
10701	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'491').
10702	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'495').
10703	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'499').
10704	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'503').
10705	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DD'-anomaly for variable 'ptObject' (lines '398'-'511').
10706	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	398	Found 'DU'-anomaly for variable 'ptObject' (lines '398'-'515').
10707	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	402	Found 'DU'-anomaly for variable 'startX' (lines '402'-'515').
10708	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	403	Found 'DU'-anomaly for variable 'startY' (lines '403'-'515').
10709	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	405	Switch statements should have a default label
10710	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	408	Found 'DD'-anomaly for variable 'ptObject' (lines '408'-'511').
10711	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	408	Found 'DU'-anomaly for variable 'ptObject' (lines '408'-'515').
10712	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	413	Found 'DD'-anomaly for variable 'ptObject' (lines '413'-'511').
10713	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	413	Found 'DU'-anomaly for variable 'ptObject' (lines '413'-'515').
10714	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	417	Found 'DD'-anomaly for variable 'ptObject' (lines '417'-'511').
10715	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	417	Found 'DU'-anomaly for variable 'ptObject' (lines '417'-'515').
10716	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	421	Found 'DD'-anomaly for variable 'ptObject' (lines '421'-'511').
10717	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	421	Found 'DU'-anomaly for variable 'ptObject' (lines '421'-'515').
10718	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	426	Found 'DD'-anomaly for variable 'ptObject' (lines '426'-'511').
10719	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	426	Found 'DU'-anomaly for variable 'ptObject' (lines '426'-'515').
10720	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	430	Found 'DD'-anomaly for variable 'ptObject' (lines '430'-'511').
10721	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	430	Found 'DU'-anomaly for variable 'ptObject' (lines '430'-'515').
10722	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	434	Found 'DD'-anomaly for variable 'ptObject' (lines '434'-'511').
10723	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	434	Found 'DU'-anomaly for variable 'ptObject' (lines '434'-'515').
10724	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	438	Found 'DD'-anomaly for variable 'ptObject' (lines '438'-'511').
10725	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	438	Found 'DU'-anomaly for variable 'ptObject' (lines '438'-'515').
10726	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	442	Found 'DD'-anomaly for variable 'ptObject' (lines '442'-'511').
10727	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	442	Found 'DU'-anomaly for variable 'ptObject' (lines '442'-'515').
10728	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	447	Found 'DD'-anomaly for variable 'ptObject' (lines '447'-'511').
10729	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	447	Found 'DU'-anomaly for variable 'ptObject' (lines '447'-'515').
10730	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	452	Found 'DD'-anomaly for variable 'ptObject' (lines '452'-'511').
10731	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	452	Found 'DU'-anomaly for variable 'ptObject' (lines '452'-'515').
10732	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	456	Found 'DD'-anomaly for variable 'ptObject' (lines '456'-'511').
10733	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	456	Found 'DU'-anomaly for variable 'ptObject' (lines '456'-'515').
10734	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	460	Found 'DD'-anomaly for variable 'ptObject' (lines '460'-'511').
10735	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	460	Found 'DU'-anomaly for variable 'ptObject' (lines '460'-'515').
10736	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	464	Found 'DD'-anomaly for variable 'ptObject' (lines '464'-'511').
10737	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	464	Found 'DU'-anomaly for variable 'ptObject' (lines '464'-'515').
10738	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	467	Found 'DD'-anomaly for variable 'ptObject' (lines '467'-'511').
10739	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	467	Found 'DU'-anomaly for variable 'ptObject' (lines '467'-'515').
10740	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	471	Found 'DD'-anomaly for variable 'ptObject' (lines '471'-'511').
10741	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	471	Found 'DU'-anomaly for variable 'ptObject' (lines '471'-'515').
10742	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	475	Found 'DD'-anomaly for variable 'ptObject' (lines '475'-'511').
10743	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	475	Found 'DU'-anomaly for variable 'ptObject' (lines '475'-'515').
10744	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	479	Found 'DD'-anomaly for variable 'ptObject' (lines '479'-'511').
10745	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	479	Found 'DU'-anomaly for variable 'ptObject' (lines '479'-'515').
10746	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	483	Found 'DD'-anomaly for variable 'ptObject' (lines '483'-'511').
10747	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	483	Found 'DU'-anomaly for variable 'ptObject' (lines '483'-'515').
10748	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	487	Found 'DD'-anomaly for variable 'ptObject' (lines '487'-'511').
10749	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	487	Found 'DU'-anomaly for variable 'ptObject' (lines '487'-'515').
10750	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	491	Found 'DD'-anomaly for variable 'ptObject' (lines '491'-'511').
10751	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	491	Found 'DU'-anomaly for variable 'ptObject' (lines '491'-'515').
10752	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	495	Found 'DD'-anomaly for variable 'ptObject' (lines '495'-'511').
10753	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	495	Found 'DU'-anomaly for variable 'ptObject' (lines '495'-'515').
10754	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	499	Found 'DD'-anomaly for variable 'ptObject' (lines '499'-'511').
10755	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	499	Found 'DU'-anomaly for variable 'ptObject' (lines '499'-'515').
10756	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	503	Found 'DD'-anomaly for variable 'ptObject' (lines '503'-'511').
10757	src/pipe/modules/queryeditor/gui/performancetrees/macros/MacroView.java	503	Found 'DU'-anomaly for variable 'ptObject' (lines '503'-'515').
10758	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	20	The class 'ArithCompNode' has a Cyclomatic Complexity of 3 (Highest = 11).
10759	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	22	Parameter 'idInput' is not assigned and could be declared final
10760	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
10761	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
10762	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
10763	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
10764	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	75	The method 'printTextualRepresentation' has a Cyclomatic Complexity of 11.
10765	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Avoid variables with short names like op
10766	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DD'-anomaly for variable 'op' (lines '77'-'80').
10767	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DD'-anomaly for variable 'op' (lines '77'-'82').
10768	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DD'-anomaly for variable 'op' (lines '77'-'84').
10769	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DD'-anomaly for variable 'op' (lines '77'-'86').
10770	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DD'-anomaly for variable 'op' (lines '77'-'88').
10771	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	77	Found 'DU'-anomaly for variable 'op' (lines '77'-'123').
10772	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	80	Avoid using if...else statements without curly braces
10773	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	80	Found 'DU'-anomaly for variable 'op' (lines '80'-'123').
10774	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	82	Avoid using if...else statements without curly braces
10775	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	82	Found 'DU'-anomaly for variable 'op' (lines '82'-'123').
10776	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	84	Avoid using if...else statements without curly braces
10777	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	84	Found 'DU'-anomaly for variable 'op' (lines '84'-'123').
10778	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	86	Avoid using if...else statements without curly braces
10779	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	86	Found 'DU'-anomaly for variable 'op' (lines '86'-'123').
10780	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	87	Avoid using if statements without curly braces
10781	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	88	Found 'DU'-anomaly for variable 'op' (lines '88'-'123').
10782	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	90	Avoid using if statements without curly braces
10783	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	91	Prefer StringBuffer over += for concatenating strings
10784	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	93	Local variable 'children' could be declared final
10785	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	94	Avoid if (x != y) ..; else ..;
10786	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	95	Avoid variables with short names like i
10787	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	95	Local variable 'i' could be declared final
10788	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	97	Local variable 'child' could be declared final
10789	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	99	Prefer StringBuffer over += for concatenating strings
10790	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	102	Avoid using if...else statements without curly braces
10791	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	102	Prefer StringBuffer over += for concatenating strings
10792	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	105	Prefer StringBuffer over += for concatenating strings
10793	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithCompNode.java	107	Prefer StringBuffer over += for concatenating strings
10794	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	21	The class 'ArithOpNode' has a Cyclomatic Complexity of 2 (Highest = 10).
10795	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	23	Parameter 'idInput' is not assigned and could be declared final
10796	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
10797	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
10798	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
10799	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
10800	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	76	The method 'printTextualRepresentation' has a Cyclomatic Complexity of 10.
10801	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Avoid variables with short names like op
10802	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DD'-anomaly for variable 'op' (lines '78'-'81').
10803	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DD'-anomaly for variable 'op' (lines '78'-'83').
10804	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DD'-anomaly for variable 'op' (lines '78'-'85').
10805	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DD'-anomaly for variable 'op' (lines '78'-'87').
10806	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DD'-anomaly for variable 'op' (lines '78'-'89').
10807	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	78	Found 'DU'-anomaly for variable 'op' (lines '78'-'121').
10808	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	81	Avoid using if...else statements without curly braces
10809	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	81	Found 'DU'-anomaly for variable 'op' (lines '81'-'121').
10810	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	83	Avoid using if...else statements without curly braces
10811	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	83	Found 'DU'-anomaly for variable 'op' (lines '83'-'121').
10812	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	85	Avoid using if...else statements without curly braces
10813	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	85	Found 'DU'-anomaly for variable 'op' (lines '85'-'121').
10814	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	87	Avoid using if...else statements without curly braces
10815	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	87	Found 'DU'-anomaly for variable 'op' (lines '87'-'121').
10816	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	88	Avoid using if statements without curly braces
10817	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	89	Found 'DU'-anomaly for variable 'op' (lines '89'-'121').
10818	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	91	Local variable 'children' could be declared final
10819	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	92	Avoid if (x != y) ..; else ..;
10820	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	93	Avoid variables with short names like i
10821	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	93	Local variable 'i' could be declared final
10822	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	95	Local variable 'child' could be declared final
10823	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	97	Prefer StringBuffer over += for concatenating strings
10824	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	100	Avoid using if...else statements without curly braces
10825	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	100	Prefer StringBuffer over += for concatenating strings
10826	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	103	Prefer StringBuffer over += for concatenating strings
10827	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	105	Prefer StringBuffer over += for concatenating strings
10828	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ArithOpNode.java	113	Prefer StringBuffer over += for concatenating strings
10829	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	25	Parameter 'idInput' is not assigned and could be declared final
10830	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	25	Parameter 'positionXInput' is not assigned and could be declared final
10831	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	25	Parameter 'positionYInput' is not assigned and could be declared final
10832	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	30	Parameter 'positionXInput' is not assigned and could be declared final
10833	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	30	Parameter 'positionYInput' is not assigned and could be declared final
10834	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	79	Avoid variables with short names like op
10835	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	79	Found 'DU'-anomaly for variable 'op' (lines '79'-'105').
10836	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	79	Local variable 'op' could be declared final
10837	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	80	Local variable 'children' could be declared final
10838	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	81	Avoid if (x != y) ..; else ..;
10839	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	82	Avoid variables with short names like i
10840	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	82	Local variable 'i' could be declared final
10841	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	84	Local variable 'child' could be declared final
10842	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	86	Prefer StringBuffer over += for concatenating strings
10843	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	89	Avoid using if...else statements without curly braces
10844	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	89	Prefer StringBuffer over += for concatenating strings
10845	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	93	Prefer StringBuffer over += for concatenating strings
10846	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	95	Prefer StringBuffer over += for concatenating strings
10847	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ConvolutionNode.java	102	Prefer StringBuffer over += for concatenating strings
10848	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	23	Parameter 'idInput' is not assigned and could be declared final
10849	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
10850	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
10851	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
10852	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
10853	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	79	Avoid variables with short names like op
10854	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	79	Found 'DD'-anomaly for variable 'op' (lines '79'-'82').
10855	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	79	Found 'DD'-anomaly for variable 'op' (lines '79'-'84').
10856	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	79	Found 'DU'-anomaly for variable 'op' (lines '79'-'116').
10857	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	82	Avoid using if...else statements without curly braces
10858	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	82	Found 'DU'-anomaly for variable 'op' (lines '82'-'116').
10859	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	83	Avoid using if statements without curly braces
10860	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	84	Found 'DU'-anomaly for variable 'op' (lines '84'-'116').
10861	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	86	Local variable 'children' could be declared final
10862	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	87	Avoid if (x != y) ..; else ..;
10863	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	88	Avoid variables with short names like i
10864	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	88	Local variable 'i' could be declared final
10865	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	90	Local variable 'child' could be declared final
10866	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	92	Prefer StringBuffer over += for concatenating strings
10867	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	95	Avoid using if...else statements without curly braces
10868	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	95	Prefer StringBuffer over += for concatenating strings
10869	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	98	Prefer StringBuffer over += for concatenating strings
10870	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	100	Prefer StringBuffer over += for concatenating strings
10871	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DisconNode.java	108	Prefer StringBuffer over += for concatenating strings
10872	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	23	Parameter 'idInput' is not assigned and could be declared final
10873	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
10874	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
10875	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
10876	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
10877	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	75	Local variable 'children' could be declared final
10878	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	76	Avoid if (x != y) ..; else ..;
10879	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	77	Prefer StringBuffer over += for concatenating strings
10880	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	78	Avoid variables with short names like i
10881	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	78	Local variable 'i' could be declared final
10882	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	80	Local variable 'child' could be declared final
10883	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	83	Prefer StringBuffer over += for concatenating strings
10884	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/DistributionNode.java	88	Prefer StringBuffer over += for concatenating strings
10885	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	22	Parameter 'idInput' is not assigned and could be declared final
10886	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
10887	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
10888	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
10889	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
10890	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	75	Local variable 'children' could be declared final
10891	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	76	Avoid if (x != y) ..; else ..;
10892	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	77	Local variable 'child' could be declared final
10893	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	80	Prefer StringBuffer over += for concatenating strings
10894	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/FiringRateNode.java	84	Prefer StringBuffer over += for concatenating strings
10895	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	24	Parameter 'idInput' is not assigned and could be declared final
10896	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	24	Parameter 'positionXInput' is not assigned and could be declared final
10897	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	24	Parameter 'positionYInput' is not assigned and could be declared final
10898	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	29	Parameter 'positionXInput' is not assigned and could be declared final
10899	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	29	Parameter 'positionYInput' is not assigned and could be declared final
10900	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	78	Avoid variables with short names like op
10901	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	78	Found 'DU'-anomaly for variable 'op' (lines '78'-'111').
10902	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	78	Local variable 'op' could be declared final
10903	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	80	Local variable 'children' could be declared final
10904	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	81	Avoid if (x != y) ..; else ..;
10905	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	82	Avoid variables with short names like i
10906	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	82	Local variable 'i' could be declared final
10907	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	84	Local variable 'child' could be declared final
10908	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	86	Prefer StringBuffer over += for concatenating strings
10909	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	89	Avoid using if...else statements without curly braces
10910	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	89	Prefer StringBuffer over += for concatenating strings
10911	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	93	Prefer StringBuffer over += for concatenating strings
10912	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	95	Prefer StringBuffer over += for concatenating strings
10913	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/InIntervalNode.java	103	Prefer StringBuffer over += for concatenating strings
10914	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	21	The class 'MomentNode' has a Cyclomatic Complexity of 3 (Highest = 11).
10915	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	23	Parameter 'idInput' is not assigned and could be declared final
10916	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
10917	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
10918	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
10919	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
10920	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	60	Avoid excessively long variable names like requiredChildTypes
10921	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	60	Local variable 'requiredChildTypes' could be declared final
10922	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	77	The method 'printTextualRepresentation' has a Cyclomatic Complexity of 11.
10923	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	79	Avoid variables with short names like op
10924	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	79	Found 'DU'-anomaly for variable 'op' (lines '79'-'145').
10925	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	79	Local variable 'op' could be declared final
10926	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	81	Local variable 'children' could be declared final
10927	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	82	Avoid if (x != y) ..; else ..;
10928	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	83	Avoid variables with short names like i
10929	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	83	Local variable 'i' could be declared final
10930	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	85	Local variable 'child' could be declared final
10931	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	89	Found 'DD'-anomaly for variable 'numVal' (lines '89'-'89').
10932	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	89	Found 'DD'-anomaly for variable 'numVal' (lines '89'-'92').
10933	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	89	Found 'DU'-anomaly for variable 'numVal' (lines '89'-'145').
10934	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	91	Avoid if (x != y) ..; else ..;
10935	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	96	Prefer StringBuffer over += for concatenating strings
10936	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	100	Prefer StringBuffer over += for concatenating strings
10937	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	104	Prefer StringBuffer over += for concatenating strings
10938	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	107	Prefer StringBuffer over += for concatenating strings
10939	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	111	Prefer StringBuffer over += for concatenating strings
10940	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/MomentNode.java	134	Avoid using if...else statements without curly braces
10941	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	22	Parameter 'idInput' is not assigned and could be declared final
10942	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
10943	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
10944	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
10945	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
10946	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	73	Local variable 'children' could be declared final
10947	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	74	Avoid if (x != y) ..; else ..;
10948	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	75	Avoid variables with short names like i
10949	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	75	Local variable 'i' could be declared final
10950	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	77	Local variable 'child' could be declared final
10951	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	80	Prefer StringBuffer over += for concatenating strings
10952	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/NegationNode.java	85	Prefer StringBuffer over += for concatenating strings
10953	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	30	Abstract classes should be named AbstractXXX
10954	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	30	The class 'OperationNode' has a Cyclomatic Complexity of 2 (Highest = 14).
10955	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	33	Avoid using implementation types like 'ArrayList'; use the interface instead
10956	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	33	Avoid using implementation types like 'ArrayList'; use the interface instead
10957	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	42	Avoid excessively long variable names like optionalChildNodes
10958	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	42	Avoid using implementation types like 'HashMap'; use the interface instead
10959	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	42	Avoid using implementation types like 'HashMap'; use the interface instead
10960	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
10961	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	57	Avoid excessively long variable names like optionalChildNodesOrdered
10962	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	57	Avoid using implementation types like 'ArrayList'; use the interface instead
10963	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	57	Avoid using implementation types like 'ArrayList'; use the interface instead
10964	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	57	Found non-transient, non-static member. Please mark as transient or provide accessors.
10965	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	59	Avoid excessively long variable names like requiredChildNodes
10966	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	59	Avoid using implementation types like 'HashMap'; use the interface instead
10967	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	59	Avoid using implementation types like 'HashMap'; use the interface instead
10968	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
10969	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	69	Avoid excessively long variable names like requiredChildNodesOrdered
10970	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	69	Avoid using implementation types like 'ArrayList'; use the interface instead
10971	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	69	Avoid using implementation types like 'ArrayList'; use the interface instead
10972	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	69	Found non-transient, non-static member. Please mark as transient or provide accessors.
10973	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	71	Found non-transient, non-static member. Please mark as transient or provide accessors.
10974	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	107	An empty statement (semicolon) not part of a loop
10975	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	122	Avoid really long methods.
10976	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	130	Found 'DD'-anomaly for variable 'arcsToDraw' (lines '130'-'139').
10977	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	130	Found 'DD'-anomaly for variable 'arcsToDraw' (lines '130'-'145').
10978	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	138	Found 'DD'-anomaly for variable 'role' (lines '138'-'138').
10979	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	138	Found 'DD'-anomaly for variable 'role' (lines '138'-'144').
10980	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	138	Found 'DD'-anomaly for variable 'role' (lines '138'-'188').
10981	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	138	Found 'DD'-anomaly for variable 'role' (lines '138'-'207').
10982	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	138	Found 'DU'-anomaly for variable 'role' (lines '138'-'222').
10983	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	139	Found 'DD'-anomaly for variable 'arcsToDraw' (lines '139'-'139').
10984	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	139	Found 'DD'-anomaly for variable 'arcsToDraw' (lines '139'-'145').
10985	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	144	Found 'DD'-anomaly for variable 'role' (lines '144'-'144').
10986	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	144	Found 'DD'-anomaly for variable 'role' (lines '144'-'188').
10987	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	144	Found 'DD'-anomaly for variable 'role' (lines '144'-'207').
10988	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	144	Found 'DU'-anomaly for variable 'role' (lines '144'-'222').
10989	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	145	Found 'DD'-anomaly for variable 'arcsToDraw' (lines '145'-'145').
10990	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	151	Avoid excessively long variable names like arcConnectionPointX
10991	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	151	Local variable 'arcConnectionPointX' could be declared final
10992	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	152	Local variable 'arcConnectionPointY' could be declared final
10993	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	158	Local variable 'spacing' could be declared final
10994	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	161	Found 'DU'-anomaly for variable 'arcStartPointX' (lines '161'-'222').
10995	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	163	Found 'DU'-anomaly for variable 'arcEndPointY' (lines '163'-'222').
10996	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	174	Found 'DU'-anomaly for variable 'arcEndPointX' (lines '174'-'222').
10997	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	181	Found 'DU'-anomaly for variable 'arcEndPointX' (lines '181'-'222').
10998	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	189	Avoid instantiating new objects inside loops
10999	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	208	Avoid instantiating new objects inside loops
11000	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	236	Avoid using if statements without curly braces
11001	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	242	Avoid using if statements without curly braces
11002	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	318	Local variable 'children' could be declared final
11003	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	322	Avoid variables with short names like it
11004	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	322	Local variable 'it' could be declared final
11005	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	328	Avoid using if...else statements without curly braces
11006	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	329	Avoid using if...else statements without curly braces
11007	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	339	A method should have only one exit point, and that should be the last statement in the method
11008	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	339	Avoid using if...else statements without curly braces
11009	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	340	Avoid using if...else statements without curly braces
11010	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	353	A getX() method which returns a boolean should be named isX()
11011	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	385	Avoid variables with short names like it
11012	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	390	Avoid using if...else statements without curly braces
11013	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	405	Avoid variables with short names like g
11014	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	405	Overriding method merely calls super
11015	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	420	Avoid variables with short names like it
11016	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	449	Avoid variables with short names like it
11017	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	483	The method 'childAssignmentValid' has a Cyclomatic Complexity of 14.
11018	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	485	Found 'DU'-anomaly for variable 'thisNodeType' (lines '485'-'561').
11019	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	486	Found 'DU'-anomaly for variable 'possibleChildReturnType' (lines '486'-'561').
11020	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	487	Found 'DU'-anomaly for variable 'role' (lines '487'-'561').
11021	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	503	Avoid using if statements without curly braces
11022	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	506	A method should have only one exit point, and that should be the last statement in the method
11023	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	513	Avoid using if statements without curly braces
11024	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	516	A method should have only one exit point, and that should be the last statement in the method
11025	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	525	Avoid using if statements without curly braces
11026	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	528	A method should have only one exit point, and that should be the last statement in the method
11027	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	538	A method should have only one exit point, and that should be the last statement in the method
11028	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	571	Found 'DD'-anomaly for variable 'numOfChildren' (lines '571'-'581').
11029	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	581	Found 'DD'-anomaly for variable 'numOfChildren' (lines '581'-'581').
11030	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	590	An empty method in an abstract class should be abstract instead
11031	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	595	clone() method should be implemented only if implementing Cloneable interface
11032	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	596	clone() method should be implemented only if implementing Cloneable interface
11033	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	596	clone() method should throw CloneNotSupportedException
11034	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/OperationNode.java	599	Consider simply returning the value vs storing it in local variable 'nodeCopy'
11035	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	22	Parameter 'idInput' is not assigned and could be declared final
11036	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
11037	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
11038	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
11039	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
11040	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	86	Found 'DD'-anomaly for variable 'description' (lines '86'-'92').
11041	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	86	Found 'DD'-anomaly for variable 'description' (lines '86'-'99').
11042	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	87	Local variable 'children' could be declared final
11043	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	88	Avoid if (x != y) ..; else ..;
11044	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	90	Avoid variables with short names like i
11045	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	90	Found 'DD'-anomaly for variable 'i' (lines '90'-'103').
11046	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	95	Prefer StringBuffer over += for concatenating strings
11047	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	100	Found 'DU'-anomaly for variable 'op1' (lines '100'-'133').
11048	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	100	Local variable 'op1' could be declared final
11049	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	101	Found 'DU'-anomaly for variable 'op2' (lines '101'-'133').
11050	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	101	Local variable 'op2' could be declared final
11051	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	102	Prefer StringBuffer over += for concatenating strings
11052	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	104	Found 'DD'-anomaly for variable 'childCount' (lines '104'-'108').
11053	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	104	Found 'DU'-anomaly for variable 'childCount' (lines '104'-'133').
11054	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	108	Found 'DD'-anomaly for variable 'childCount' (lines '108'-'108').
11055	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	108	Found 'DU'-anomaly for variable 'childCount' (lines '108'-'133').
11056	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	110	Prefer StringBuffer over += for concatenating strings
11057	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	114	Avoid using if...else statements without curly braces
11058	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	114	Prefer StringBuffer over += for concatenating strings
11059	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	116	Avoid using if...else statements without curly braces
11060	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	116	Prefer StringBuffer over += for concatenating strings
11061	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	135	Avoid using implementation types like 'ArrayList'; use the interface instead
11062	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	135	Avoid using implementation types like 'ArrayList'; use the interface instead
11063	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	137	Avoid variables with short names like i
11064	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	137	Local variable 'i' could be declared final
11065	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	138	Found 'DU'-anomaly for variable 'childsLabelBuffer' (lines '138'-'155').
11066	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	140	Local variable 'childNode' could be declared final
11067	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	142	These nested if statements could be combined
11068	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	145	A method should have only one exit point, and that should be the last statement in the method
11069	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	145	Avoid using if...else statements without curly braces
11070	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	147	Avoid using if...else statements without curly braces
11071	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	147	Found 'DU'-anomaly for variable 'childsLabelBuffer' (lines '147'-'155').
11072	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	151	A method should have only one exit point, and that should be the last statement in the method
11073	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PassageTimeDensityNode.java	154	Avoid using if...else statements without curly braces
11074	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	20	The class 'PercentileNode' has a Cyclomatic Complexity of 3 (Highest = 14).
11075	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	60	Avoid excessively long variable names like requiredChildTypes
11076	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	60	Local variable 'requiredChildTypes' could be declared final
11077	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	80	The method 'printTextualRepresentation' has a Cyclomatic Complexity of 14.
11078	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	81	Local variable 'description' could be declared final
11079	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	82	Avoid variables with short names like op
11080	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	82	Found 'DU'-anomaly for variable 'op' (lines '82'-'141').
11081	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	82	Local variable 'op' could be declared final
11082	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	83	Avoid unused local variables such as 'numString'.
11083	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	83	Avoid unused local variables such as 'passageString'.
11084	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	83	Local variable 'numString' could be declared final
11085	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	83	Local variable 'passageString' could be declared final
11086	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	86	Avoid if (x != y) ..; else ..;
11087	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	87	Avoid variables with short names like i
11088	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/PercentileNode.java	95	Avoid if (x != y) ..; else ..;
11089	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	23	Parameter 'idInput' is not assigned and could be declared final
11090	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
11091	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
11092	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
11093	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
11094	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	77	Avoid variables with short names like op
11095	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	77	Found 'DU'-anomaly for variable 'op' (lines '77'-'109').
11096	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	77	Local variable 'op' could be declared final
11097	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	79	Local variable 'children' could be declared final
11098	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	80	Avoid if (x != y) ..; else ..;
11099	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	81	Avoid variables with short names like i
11100	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	81	Local variable 'i' could be declared final
11101	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	83	Local variable 'child' could be declared final
11102	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	85	Prefer StringBuffer over += for concatenating strings
11103	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	88	Avoid using if...else statements without curly braces
11104	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	88	Prefer StringBuffer over += for concatenating strings
11105	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	91	Prefer StringBuffer over += for concatenating strings
11106	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	93	Prefer StringBuffer over += for concatenating strings
11107	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInIntervalNode.java	101	Prefer StringBuffer over += for concatenating strings
11108	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	22	Parameter 'idInput' is not assigned and could be declared final
11109	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
11110	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
11111	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
11112	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
11113	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	78	Found 'DU'-anomaly for variable 'op1' (lines '78'-'127').
11114	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	78	Local variable 'op1' could be declared final
11115	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	79	Found 'DU'-anomaly for variable 'op2' (lines '79'-'127').
11116	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	79	Local variable 'op2' could be declared final
11117	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	81	Local variable 'children' could be declared final
11118	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	82	Avoid if (x != y) ..; else ..;
11119	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	83	Found 'DD'-anomaly for variable 'childrenLeft' (lines '83'-'90').
11120	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	83	Found 'DU'-anomaly for variable 'childrenLeft' (lines '83'-'127').
11121	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	84	Avoid variables with short names like i
11122	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	84	Local variable 'i' could be declared final
11123	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	86	Local variable 'child' could be declared final
11124	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	88	Prefer StringBuffer over += for concatenating strings
11125	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	93	Avoid using if...else statements without curly braces
11126	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	93	Prefer StringBuffer over += for concatenating strings
11127	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	94	Avoid using if statements without curly braces
11128	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	95	Prefer StringBuffer over += for concatenating strings
11129	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	99	Prefer StringBuffer over += for concatenating strings
11130	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ProbInStatesNode.java	101	Prefer StringBuffer over += for concatenating strings
11131	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	24	Parameter 'idInput' is not assigned and could be declared final
11132	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	24	Parameter 'positionXInput' is not assigned and could be declared final
11133	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	24	Parameter 'positionYInput' is not assigned and could be declared final
11134	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	29	Parameter 'positionXInput' is not assigned and could be declared final
11135	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	29	Parameter 'positionYInput' is not assigned and could be declared final
11136	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	75	Avoid variables with short names like op
11137	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	75	Found 'DU'-anomaly for variable 'op' (lines '75'-'107').
11138	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	75	Local variable 'op' could be declared final
11139	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	77	Local variable 'children' could be declared final
11140	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	78	Avoid if (x != y) ..; else ..;
11141	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	79	Avoid variables with short names like i
11142	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	79	Local variable 'i' could be declared final
11143	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	81	Local variable 'child' could be declared final
11144	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	83	Prefer StringBuffer over += for concatenating strings
11145	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	86	Avoid using if...else statements without curly braces
11146	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	86	Prefer StringBuffer over += for concatenating strings
11147	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	89	Prefer StringBuffer over += for concatenating strings
11148	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	91	Prefer StringBuffer over += for concatenating strings
11149	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/RangeNode.java	99	Prefer StringBuffer over += for concatenating strings
11150	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	58	Local variable 'requiredNodeTypes' could be declared final
11151	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	90	Found 'DD'-anomaly for variable 'description' (lines '90'-'102').
11152	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	90	Found 'DD'-anomaly for variable 'description' (lines '90'-'98').
11153	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	91	Local variable 'children' could be declared final
11154	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	94	Local variable 'child' could be declared final
11155	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	95	Local variable 'childsReturnType' could be declared final
11156	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	106	Prefer StringBuffer over += for concatenating strings
11157	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/ResultNode.java	108	Prefer StringBuffer over += for concatenating strings
11158	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	24	Avoid excessively long variable names like numberOfQueriesConnected
11159	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
11160	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	26	Parameter 'idInput' is not assigned and could be declared final
11161	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	26	Parameter 'positionXInput' is not assigned and could be declared final
11162	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	26	Parameter 'positionYInput' is not assigned and could be declared final
11163	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	28	Overridable method 'initialiseRequiredChildNodes' called during object construction
11164	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	31	Parameter 'positionXInput' is not assigned and could be declared final
11165	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	31	Parameter 'positionYInput' is not assigned and could be declared final
11166	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	33	Overridable method 'initialiseRequiredChildNodes' called during object construction
11167	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	62	Local variable 'requiredNodeTypes' could be declared final
11168	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	73	The String literal "query " appears 4 times in this file; the first occurrence is on line 73
11169	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	92	Avoid variables with short names like op
11170	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	92	Found 'DU'-anomaly for variable 'op' (lines '92'-'134').
11171	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	92	Local variable 'op' could be declared final
11172	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	93	Found 'DD'-anomaly for variable 'counter' (lines '93'-'100').
11173	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	93	Found 'DU'-anomaly for variable 'counter' (lines '93'-'134').
11174	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	95	Local variable 'children' could be declared final
11175	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	96	Avoid if (x != y) ..; else ..;
11176	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	97	Avoid variables with short names like i
11177	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	97	Local variable 'i' could be declared final
11178	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	99	Local variable 'child' could be declared final
11179	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	101	Prefer StringBuffer over += for concatenating strings
11180	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	103	Prefer StringBuffer over += for concatenating strings
11181	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	106	Prefer StringBuffer over += for concatenating strings
11182	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	111	Prefer StringBuffer over += for concatenating strings
11183	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	112	Prefer StringBuffer over += for concatenating strings
11184	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	118	Avoid using if...else statements without curly braces
11185	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	153	Found 'DD'-anomaly for variable 'allAssigned' (lines '153'-'159').
11186	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	154	Avoid variables with short names like i
11187	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	159	Found 'DD'-anomaly for variable 'allAssigned' (lines '159'-'159').
11188	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	174	Avoid excessively long variable names like optionalArcAvailable
11189	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	174	Found 'DD'-anomaly for variable 'optionalArcAvailable' (lines '174'-'180').
11190	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	175	Avoid variables with short names like i
11191	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SequentialNode.java	180	Found 'DD'-anomaly for variable 'optionalArcAvailable' (lines '180'-'180').
11192	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	23	Parameter 'idInput' is not assigned and could be declared final
11193	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
11194	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
11195	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
11196	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
11197	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	76	Avoid variables with short names like op
11198	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	76	Found 'DU'-anomaly for variable 'op' (lines '76'-'108').
11199	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	76	Local variable 'op' could be declared final
11200	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	78	Local variable 'children' could be declared final
11201	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	79	Avoid if (x != y) ..; else ..;
11202	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	80	Avoid variables with short names like i
11203	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	80	Local variable 'i' could be declared final
11204	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	82	Local variable 'child' could be declared final
11205	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	84	Prefer StringBuffer over += for concatenating strings
11206	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	87	Avoid using if...else statements without curly braces
11207	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	87	Prefer StringBuffer over += for concatenating strings
11208	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	90	Prefer StringBuffer over += for concatenating strings
11209	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	92	Prefer StringBuffer over += for concatenating strings
11210	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/StatesAtTimeNode.java	100	Prefer StringBuffer over += for concatenating strings
11211	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	24	Parameter 'idInput' is not assigned and could be declared final
11212	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	24	Parameter 'positionXInput' is not assigned and could be declared final
11213	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	24	Parameter 'positionYInput' is not assigned and could be declared final
11214	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	29	Parameter 'positionXInput' is not assigned and could be declared final
11215	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	29	Parameter 'positionYInput' is not assigned and could be declared final
11216	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	78	Avoid variables with short names like op
11217	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	78	Found 'DU'-anomaly for variable 'op' (lines '78'-'110').
11218	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	78	Local variable 'op' could be declared final
11219	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	80	Local variable 'children' could be declared final
11220	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	81	Avoid if (x != y) ..; else ..;
11221	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	82	Avoid variables with short names like i
11222	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	82	Local variable 'i' could be declared final
11223	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	84	Local variable 'child' could be declared final
11224	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	86	Prefer StringBuffer over += for concatenating strings
11225	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	89	Avoid using if...else statements without curly braces
11226	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	89	Prefer StringBuffer over += for concatenating strings
11227	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	92	Prefer StringBuffer over += for concatenating strings
11228	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	94	Prefer StringBuffer over += for concatenating strings
11229	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateProbNode.java	102	Prefer StringBuffer over += for concatenating strings
11230	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	23	Parameter 'idInput' is not assigned and could be declared final
11231	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	23	Parameter 'positionXInput' is not assigned and could be declared final
11232	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	23	Parameter 'positionYInput' is not assigned and could be declared final
11233	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	28	Parameter 'positionXInput' is not assigned and could be declared final
11234	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	28	Parameter 'positionYInput' is not assigned and could be declared final
11235	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	76	Avoid variables with short names like op
11236	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	76	Found 'DU'-anomaly for variable 'op' (lines '76'-'108').
11237	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	76	Local variable 'op' could be declared final
11238	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	78	Local variable 'children' could be declared final
11239	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	79	Avoid if (x != y) ..; else ..;
11240	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	80	Avoid variables with short names like i
11241	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	80	Local variable 'i' could be declared final
11242	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	82	Local variable 'child' could be declared final
11243	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	84	Prefer StringBuffer over += for concatenating strings
11244	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	87	Avoid using if...else statements without curly braces
11245	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	87	Prefer StringBuffer over += for concatenating strings
11246	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	90	Prefer StringBuffer over += for concatenating strings
11247	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	92	Prefer StringBuffer over += for concatenating strings
11248	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SteadyStateStatesNode.java	100	Prefer StringBuffer over += for concatenating strings
11249	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	23	The class 'SubsetNode' has a Cyclomatic Complexity of 3 (Highest = 11).
11250	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	63	Local variable 'requiredNodeTypes' could be declared final
11251	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	88	Local variable 'children' could be declared final
11252	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	89	Avoid if (x != y) ..; else ..;
11253	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	91	Avoid variables with short names like i
11254	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	91	Local variable 'i' could be declared final
11255	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	94	Local variable 'child' could be declared final
11256	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	96	Prefer StringBuffer over += for concatenating strings
11257	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	99	Avoid using if...else statements without curly braces
11258	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	99	Prefer StringBuffer over += for concatenating strings
11259	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	104	Prefer StringBuffer over += for concatenating strings
11260	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	106	Prefer StringBuffer over += for concatenating strings
11261	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	114	Prefer StringBuffer over += for concatenating strings
11262	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	126	The method 'childAssignmentValid' has a Cyclomatic Complexity of 11.
11263	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	128	Avoid excessively long variable names like possibleChildReturnType
11264	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	128	Found 'DU'-anomaly for variable 'possibleChildReturnType' (lines '128'-'224').
11265	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	128	Local variable 'possibleChildReturnType' could be declared final
11266	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	129	Found 'DU'-anomaly for variable 'role' (lines '129'-'224').
11267	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	143	Avoid excessively long variable names like allowedNodeReturnTypes
11268	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	146	A method should have only one exit point, and that should be the last statement in the method
11269	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	146	Avoid using if...else statements without curly braces
11270	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	152	A method should have only one exit point, and that should be the last statement in the method
11271	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	160	A method should have only one exit point, and that should be the last statement in the method
11272	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	166	Found 'DD'-anomaly for variable 'existingChild' (lines '166'-'183').
11273	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	166	Found 'DU'-anomaly for variable 'existingChild' (lines '166'-'224').
11274	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	167	Avoid excessively long variable names like existingChildReturnType
11275	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	167	Found 'DD'-anomaly for variable 'existingChildReturnType' (lines '167'-'184').
11276	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	167	Found 'DU'-anomaly for variable 'existingChildReturnType' (lines '167'-'224').
11277	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	168	Avoid variables with short names like it
11278	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	184	Found 'DD'-anomaly for variable 'existingChildReturnType' (lines '184'-'184').
11279	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	184	Found 'DU'-anomaly for variable 'existingChildReturnType' (lines '184'-'224').
11280	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	190	Avoid excessively long variable names like allowedNodeReturnTypes
11281	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	196	A method should have only one exit point, and that should be the last statement in the method
11282	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	196	Avoid using if...else statements without curly braces
11283	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	203	A method should have only one exit point, and that should be the last statement in the method
11284	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	230	Avoid using if...else statements without curly braces
11285	src/pipe/modules/queryeditor/gui/performancetrees/operationnodes/SubsetNode.java	231	Avoid using if...else statements without curly braces
11286	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	20	Parameter 'idInput' is not assigned and could be declared final
11287	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	20	Parameter 'positionXInput' is not assigned and could be declared final
11288	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	20	Parameter 'positionYInput' is not assigned and could be declared final
11289	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	25	Parameter 'positionXInput' is not assigned and could be declared final
11290	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	25	Parameter 'positionYInput' is not assigned and could be declared final
11291	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	39	Assigning an Object to null is a code smell. Consider refactoring.
11292	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	62	Avoid if (x != y) ..; else ..;
11293	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	63	Avoid using if...else statements without curly braces
11294	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	63	Prefer StringBuffer over += for concatenating strings
11295	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	65	Avoid using if...else statements without curly braces
11296	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ActionsNode.java	65	Prefer StringBuffer over += for concatenating strings
11297	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	21	Parameter 'idInput' is not assigned and could be declared final
11298	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	21	Parameter 'positionXInput' is not assigned and could be declared final
11299	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	21	Parameter 'positionYInput' is not assigned and could be declared final
11300	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	26	Parameter 'positionXInput' is not assigned and could be declared final
11301	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	26	Parameter 'positionYInput' is not assigned and could be declared final
11302	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	40	Assigning an Object to null is a code smell. Consider refactoring.
11303	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	47	A getX() method which returns a boolean should be named isX()
11304	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	65	Avoid if (x != y) ..; else ..;
11305	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	66	Avoid using if...else statements without curly braces
11306	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	66	Prefer StringBuffer over += for concatenating strings
11307	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	68	Avoid using if...else statements without curly braces
11308	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/BoolNode.java	68	Prefer StringBuffer over += for concatenating strings
11309	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	22	Parameter 'idInput' is not assigned and could be declared final
11310	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	22	Parameter 'positionXInput' is not assigned and could be declared final
11311	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	22	Parameter 'positionYInput' is not assigned and could be declared final
11312	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	27	Parameter 'positionXInput' is not assigned and could be declared final
11313	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	27	Parameter 'positionYInput' is not assigned and could be declared final
11314	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	41	Assigning an Object to null is a code smell. Consider refactoring.
11315	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	78	Avoid if (x != y) ..; else ..;
11316	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	79	Local variable 'input' could be declared final
11317	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	80	Found 'DD'-anomaly for variable 'output' (lines '80'-'88').
11318	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	82	Local variable 'indexOfDot' could be declared final
11319	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	82	String.indexOf(char) is faster than String.indexOf(String).
11320	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	84	Prefer StringBuffer over += for concatenating strings
11321	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	88	Avoid using if...else statements without curly braces
11322	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	89	Prefer StringBuffer over += for concatenating strings
11323	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	92	Avoid using if...else statements without curly braces
11324	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	92	Prefer StringBuffer over += for concatenating strings
11325	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	98	Local variable 'dotPosition' could be declared final
11326	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	98	String.indexOf(char) is faster than String.indexOf(String).
11327	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	99	Local variable 'stringLength' could be declared final
11328	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	101	Avoid using if statements without curly braces
11329	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	102	A method should have only one exit point, and that should be the last statement in the method
11330	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	104	A method should have only one exit point, and that should be the last statement in the method
11331	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/NumNode.java	107	Avoid using if...else statements without curly braces
11332	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	20	Parameter 'idInput' is not assigned and could be declared final
11333	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	20	Parameter 'positionXInput' is not assigned and could be declared final
11334	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	20	Parameter 'positionYInput' is not assigned and could be declared final
11335	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	25	Parameter 'positionXInput' is not assigned and could be declared final
11336	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	25	Parameter 'positionYInput' is not assigned and could be declared final
11337	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	39	Assigning an Object to null is a code smell. Consider refactoring.
11338	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	60	Avoid if (x != y) ..; else ..;
11339	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	61	Avoid using if...else statements without curly braces
11340	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	61	Prefer StringBuffer over += for concatenating strings
11341	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	63	Avoid using if...else statements without curly braces
11342	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StateFunctionNode.java	63	Prefer StringBuffer over += for concatenating strings
11343	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	21	The class 'StatesNode' has a Cyclomatic Complexity of 2 (Highest = 10).
11344	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	25	Parameter 'idInput' is not assigned and could be declared final
11345	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	25	Parameter 'positionXInput' is not assigned and could be declared final
11346	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	25	Parameter 'positionYInput' is not assigned and could be declared final
11347	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	30	Parameter 'positionXInput' is not assigned and could be declared final
11348	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	30	Parameter 'positionYInput' is not assigned and could be declared final
11349	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	44	Assigning an Object to null is a code smell. Consider refactoring.
11350	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	68	Avoid excessively long variable names like stateLabelDefinition
11351	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	68	Local variable 'stateLabelDefinition' could be declared final
11352	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	74	The method 'printTextualRepresentation' has a Cyclomatic Complexity of 10.
11353	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	76	Found 'DD'-anomaly for variable 'roleForParentNode' (lines '76'-'86').
11354	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	76	Found 'DD'-anomaly for variable 'roleForParentNode' (lines '76'-'88').
11355	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	76	Found 'DD'-anomaly for variable 'roleForParentNode' (lines '76'-'97').
11356	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	76	Found 'DD'-anomaly for variable 'roleForParentNode' (lines '76'-'99').
11357	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	76	Found 'DU'-anomaly for variable 'roleForParentNode' (lines '76'-'108').
11358	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	79	Avoid if (x != y) ..; else ..;
11359	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	80	Avoid using if...else statements without curly braces
11360	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	80	Prefer StringBuffer over += for concatenating strings
11361	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	82	Avoid using if...else statements without curly braces
11362	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	82	Prefer StringBuffer over += for concatenating strings
11363	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	86	Avoid using if...else statements without curly braces
11364	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	86	Found 'DU'-anomaly for variable 'roleForParentNode' (lines '86'-'108').
11365	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	88	Avoid using if...else statements without curly braces
11366	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	88	Found 'DU'-anomaly for variable 'roleForParentNode' (lines '88'-'108').
11367	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	90	Avoid if (x != y) ..; else ..;
11368	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	91	Avoid using if...else statements without curly braces
11369	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	91	Prefer StringBuffer over += for concatenating strings
11370	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	93	Prefer StringBuffer over += for concatenating strings
11371	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	101	Avoid if (x != y) ..; else ..;
11372	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/StatesNode.java	102	Prefer StringBuffer over += for concatenating strings
11373	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	24	Abstract classes should be named AbstractXXX
11374	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
11375	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	30	Parameter 'idInput' is not assigned and could be declared final
11376	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	30	Parameter 'positionXInput' is not assigned and could be declared final
11377	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	30	Parameter 'positionYInput' is not assigned and could be declared final
11378	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	30	Parameter 'typeInput' is not assigned and could be declared final
11379	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	34	Parameter 'idInput' is not assigned and could be declared final
11380	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	55	Avoid using if statements without curly braces
11381	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	72	System.out.print is used
11382	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	76	Local variable 'labelWidth' could be declared final
11383	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	77	Avoid excessively long variable names like nodeLabelPositionX
11384	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	77	Local variable 'nodeLabelPositionX' could be declared final
11385	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	78	Avoid excessively long variable names like nodeLabelPositionY
11386	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	78	Local variable 'nodeLabelPositionY' could be declared final
11387	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	85	Local variable 'queryView' could be declared final
11388	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	88	Avoid if (x != y) ..; else ..;
11389	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	111	Local variable 'macroView' could be declared final
11390	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	125	Avoid variables with short names like g
11391	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	128	Avoid variables with short names like g2
11392	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	134	Avoid using if statements without curly braces
11393	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	134	These nested if statements could be combined
11394	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	138	An empty method in an abstract class should be abstract instead
11395	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	144	An empty method in an abstract class should be abstract instead
11396	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	149	clone() method should be implemented only if implementing Cloneable interface
11397	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	149	clone() method should be implemented only if implementing Cloneable interface
11398	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/ValueNode.java	149	clone() method should throw CloneNotSupportedException
11399	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	32	The class 'ActionLabelManager' has a Cyclomatic Complexity of 4 (Highest = 10).
11400	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	45	Parameter 'nodeInput' is not assigned and could be declared final
11401	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	45	The method 'actionLabelAssignmentDialog' has a Cyclomatic Complexity of 10.
11402	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	51	Local variable 'okToProceed' could be declared final
11403	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	56	Local variable 'contentPane' could be declared final
11404	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	60	Local variable 'instructionLabel' could be declared final
11405	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	66	Local variable 'actionLabels' could be declared final
11406	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	67	Avoid excessively long variable names like existingActionLabel
11407	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	67	Local variable 'existingActionLabel' could be declared final
11408	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	68	Avoid using if statements without curly braces
11409	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	73	Avoid using if...else statements without curly braces
11410	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	75	Avoid using if...else statements without curly braces
11411	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	77	Avoid variables with short names like e
11412	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	77	Parameter 'e' is not assigned and could be declared final
11413	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	78	Avoid variables with short names like cb
11414	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	80	Position literals first in String comparisons
11415	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	88	Avoid using if...else statements without curly braces
11416	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	90	Avoid using if...else statements without curly braces
11417	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	100	Avoid excessively long variable names like cancelButtonListener
11418	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	101	Avoid variables with short names like e
11419	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ActionLabelManager.java	101	Parameter 'e' is not assigned and could be declared final
11420	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	30	Variables that are final and static should be in all caps.
11421	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
11422	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	36	Private field 'currentMarking' could be made final; it is only initialized in the declaration or constructor.
11423	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
11424	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	38	Private field 'defaultColor' could be made final; it is only initialized in the declaration or constructor.
11425	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
11426	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	39	Private field 'validColor' could be made final; it is only initialized in the declaration or constructor.
11427	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
11428	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
11429	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	47	Parameter 'inputPlace' is not assigned and could be declared final
11430	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	49	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
11431	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	61	Avoid variables with short names like g
11432	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	61	Parameter 'g' is not assigned and could be declared final
11433	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	64	Avoid variables with short names like g2
11434	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	64	Local variable 'g2' could be declared final
11435	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	65	Local variable 'saveXform' could be declared final
11436	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	66	Local variable 'scaledXform' could be declared final
11437	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	67	Local variable 'insets' could be declared final
11438	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	68	Avoid variables with short names like x
11439	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	68	Local variable 'x' could be declared final
11440	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	69	Avoid variables with short names like y
11441	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	81	Avoid using if...else statements without curly braces
11442	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	83	Avoid using if...else statements without curly braces
11443	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	99	A method should have only one exit point, and that should be the last statement in the method
11444	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	99	Avoid using if...else statements without curly braces
11445	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	101	Avoid using if...else statements without curly braces
11446	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	131	Avoid variables with short names like x
11447	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	131	Parameter 'x' is not assigned and could be declared final
11448	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	131	Parameter 'y' is not assigned and could be declared final
11449	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	139	Overriding method merely calls super
11450	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	139	clone() method should throw CloneNotSupportedException
11451	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	143	Avoid reassigning parameters such as 'operator'
11452	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	143	Avoid reassigning parameters such as 'operator'
11453	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	143	Parameter 'operand' is not assigned and could be declared final
11454	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	145	Position literals first in String comparisons
11455	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	146	Avoid using if...else statements without curly braces
11456	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	147	Avoid using if statements without curly braces
11457	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	147	Position literals first in String comparisons
11458	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	168	Avoid if (x != y) ..; else ..;
11459	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	168	Avoid unnecessary if..then..else statements when returning a boolean
11460	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	168	Position literals first in String comparisons
11461	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	168	Position literals first in String comparisons
11462	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	169	A method should have only one exit point, and that should be the last statement in the method
11463	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlace.java	175	Document empty method
11464	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
11465	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
11466	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
11467	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
11468	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	39	Use explicit scoping instead of the default package private level
11469	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
11470	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	40	Use explicit scoping instead of the default package private level
11471	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	41	Use explicit scoping instead of the default package private level
11472	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	43	It is a good practice to call super() in a constructor
11473	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	43	Parameter 'parentDialog' is not assigned and could be declared final
11474	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	43	Parameter 'place' is not assigned and could be declared final
11475	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	54	Local variable 'contentPane' could be declared final
11476	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	58	Local variable 'mainPanel' could be declared final
11477	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	76	Local variable 'buttonPanel' could be declared final
11478	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	103	Avoid variables with short names like e
11479	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	103	Parameter 'e' is not assigned and could be declared final
11480	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	104	Local variable 'popup' could be declared final
11481	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	105	Local variable 'menuItem' could be declared final
11482	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	109	Avoid variables with short names like e
11483	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	109	Parameter 'e' is not assigned and could be declared final
11484	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	135	Use explicit scoping instead of the default package private level
11485	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	135	Variables should start with a lowercase character
11486	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	136	Parameter 'event' is not assigned and could be declared final
11487	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	142	Found 'DU'-anomaly for variable 'operatorStr' (lines '142'-'163').
11488	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	152	System.out.print is used
11489	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	167	Found 'DD'-anomaly for variable 'inputOK' (lines '167'-'172').
11490	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	171	Avoid using if statements without curly braces
11491	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	172	Found 'DD'-anomaly for variable 'inputOK' (lines '172'-'172').
11492	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/ConditionPlaceHandler.java	183	Avoid variables with short names like e
11493	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	20	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11494	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	37	Parameter 'cols' is not assigned and could be declared final
11495	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	37	Parameter 'initialX' is not assigned and could be declared final
11496	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	37	Parameter 'initialY' is not assigned and could be declared final
11497	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	37	Parameter 'parent' is not assigned and could be declared final
11498	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	37	Parameter 'rows' is not assigned and could be declared final
11499	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	40	Found 'DU'-anomaly for variable 'layout' (lines '40'-'86').
11500	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	42	System.out.print is used
11501	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	47	Avoid variables with short names like x
11502	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	56	Local variable 'constraints' could be declared final
11503	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	65	Avoid variables with short names like y
11504	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	74	Local variable 'constraints' could be declared final
11505	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	83	Local variable 'pCons' could be declared final
11506	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	89	Local variable 'layout' could be declared final
11507	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	90	Avoid variables with short names like c
11508	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/SpringLayoutUtilities.java	90	Local variable 'c' could be declared final
11509	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	39	The class 'StateGroupEditor' has a Cyclomatic Complexity of 4 (Highest = 12).
11510	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
11511	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	44	Use explicit scoping instead of the default package private level
11512	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
11513	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	45	Use explicit scoping instead of the default package private level
11514	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	46	Avoid using implementation types like 'ArrayList'; use the interface instead
11515	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	46	Avoid using implementation types like 'ArrayList'; use the interface instead
11516	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	46	Found non-transient, non-static member. Please mark as transient or provide accessors.
11517	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	46	Use explicit scoping instead of the default package private level
11518	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
11519	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	47	Use explicit scoping instead of the default package private level
11520	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
11521	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	48	Use explicit scoping instead of the default package private level
11522	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	52	Avoid excessively long variable names like stateNameTextField
11523	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	54	Avoid excessively long variable names like initialStateButton
11524	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	78	Local variable 'stateViewPanel' could be declared final
11525	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	83	Local variable 'stateNamePanel' could be declared final
11526	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	84	This statement may have some unnecessary parentheses
11527	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	86	Local variable 'stateNameLabel' could be declared final
11528	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	97	Local variable 'viewPanel' could be declared final
11529	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	98	This statement may have some unnecessary parentheses
11530	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	100	Local variable 'screenSize' could be declared final
11531	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	101	Avoid excessively long variable names like viewPanelPreferredWidth
11532	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	102	Avoid excessively long variable names like viewPanelPreferredHeight
11533	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	103	Avoid excessively long variable names like viewPanelPreferredSize
11534	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	108	This statement may have some unnecessary parentheses
11535	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	148	Avoid reassigning parameters such as 'operator'
11536	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	148	Avoid reassigning parameters such as 'operator'
11537	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	148	Avoid reassigning parameters such as 'operator'
11538	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	151	Position literals first in String comparisons
11539	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	152	Avoid using if...else statements without curly braces
11540	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	153	Position literals first in String comparisons
11541	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	154	Avoid using if...else statements without curly braces
11542	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	155	Avoid using if statements without curly braces
11543	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	155	Position literals first in String comparisons
11544	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	176	Avoid using for statements without curly braces
11545	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	180	Avoid using if statements without curly braces
11546	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	188	Parameter 'event' is not assigned and could be declared final
11547	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	188	The method 'actionPerformed' has a Cyclomatic Complexity of 12.
11548	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	223	Avoid using if statements without curly braces
11549	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	262	Parameter 'event' is not assigned and could be declared final
11550	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	265	Avoid using if...else statements without curly braces
11551	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	267	Avoid using if...else statements without curly braces
11552	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateGroupEditor.java	268	Avoid using if statements without curly braces
11553	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	11	A high number of imports can indicate a high degree of coupling within an object.
11554	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	50	The class 'StateLabelManager' has a Cyclomatic Complexity of 5 (Highest = 17).
11555	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	51	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11556	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	51	This class has too many methods, consider refactoring it.
11557	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	54	Avoid excessively long variable names like availableStateGroups
11558	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	58	Avoid excessively long variable names like stateLabelTextField
11559	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	59	Avoid excessively long variable names like stateLabelDropdown
11560	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	61	Avoid excessively long variable names like statesAssignedToLabelList
11561	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	78	Local variable 'contentPane' could be declared final
11562	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	82	Local variable 'buttonNames' could be declared final
11563	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	83	Local variable 'okButtonListener' could be declared final
11564	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	85	Parameter 'arg0' is not assigned and could be declared final
11565	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	87	Avoid if (x != y) ..; else ..;
11566	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	96	Avoid using if...else statements without curly braces
11567	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	97	Avoid using if...else statements without curly braces
11568	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	108	The String literal "Warning" appears 8 times in this file; the first occurrence is on line 108
11569	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	122	Avoid excessively long variable names like cancelButtonListener
11570	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	122	Local variable 'cancelButtonListener' could be declared final
11571	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	124	Parameter 'arg0' is not assigned and could be declared final
11572	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	130	Local variable 'buttonListeners' could be declared final
11573	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	138	Avoid variables with short names like we
11574	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	165	Avoid unnecessary if..then..else statements when returning a boolean
11575	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	165	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
11576	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	166	A method should have only one exit point, and that should be the last statement in the method
11577	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	166	Avoid using if...else statements without curly braces
11578	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	167	Avoid using if...else statements without curly braces
11579	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	175	Assigning an Object to null is a code smell. Consider refactoring.
11580	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	176	Assigning an Object to null is a code smell. Consider refactoring.
11581	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	177	Assigning an Object to null is a code smell. Consider refactoring.
11582	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	190	Parameter 'withStateLabelControlButtons' is not assigned and could be declared final
11583	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	190	The method 'getStateLabelManagementPanel' has a Cyclomatic Complexity of 13.
11584	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	194	This statement may have some unnecessary parentheses
11585	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	201	Avoid using if statements without curly braces
11586	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	207	Avoid variables with short names like e
11587	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	207	Parameter 'e' is not assigned and could be declared final
11588	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	209	Avoid variables with short names like cb
11589	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	211	Position literals first in String comparisons
11590	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	211	The String literal "-- Select --" appears 5 times in this file; the first occurrence is on line 211
11591	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	227	Avoid variables with short names like e
11592	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	227	Parameter 'e' is not assigned and could be declared final
11593	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	233	Avoid if (x != y) ..; else ..;
11594	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	257	Position literals first in String comparisons
11595	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	258	Position literals first in String comparisons
11596	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	269	Position literals first in String comparisons
11597	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	270	Position literals first in String comparisons
11598	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	301	Avoid using if statements without curly braces
11599	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	304	Avoid variables with short names like i
11600	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	311	Avoid using if...else statements without curly braces
11601	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	351	Found 'DD'-anomaly for variable 'stateNames' (lines '351'-'354').
11602	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	352	Avoid using for statements without curly braces
11603	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	355	Found 'DD'-anomaly for variable 'names' (lines '355'-'361').
11604	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	356	Found 'DU'-anomaly for variable 'j' (lines '356'-'365').
11605	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	361	Found 'DD'-anomaly for variable 'names' (lines '361'-'361').
11606	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	362	Found 'DU'-anomaly for variable 'j' (lines '362'-'365').
11607	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	373	Avoid if (x != y) ..; else ..;
11608	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	441	Avoid if (x != y) ..; else ..;
11609	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	489	The method 'createEditLabelPopup' has a Cyclomatic Complexity of 10.
11610	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	518	Avoid if (x != y) ..; else ..;
11611	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	583	Avoid really long methods.
11612	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	583	The method 'getStatesAssignmentManagerPanel' has a Cyclomatic Complexity of 17.
11613	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	583	The method getStatesAssignmentManagerPanel() has an NCSS line count of 108
11614	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	583	The method getStatesAssignmentManagerPanel() has an NPath complexity of 288
11615	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	586	This statement may have some unnecessary parentheses
11616	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11617	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11618	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11619	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11620	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11621	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	663	Found 'DU'-anomaly for variable 'pnModel' (lines '663'-'791').
11622	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	695	This statement may have some unnecessary parentheses
11623	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	775	This statement may have some unnecessary parentheses
11624	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	802	Found 'DD'-anomaly for variable 'stringContainsText' (lines '802'-'809').
11625	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	808	Avoid using if statements without curly braces
11626	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	809	Found 'DD'-anomaly for variable 'stringContainsText' (lines '809'-'809').
11627	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	823	Avoid using if statements without curly braces
11628	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	824	A method should have only one exit point, and that should be the last statement in the method
11629	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	885	Found non-transient, non-static member. Please mark as transient or provide accessors.
11630	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	885	Use explicit scoping instead of the default package private level
11631	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	887	Avoid unnecessary constructors - the compiler will generate these for you
11632	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	887	Document empty constructor
11633	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	887	It is a good practice to call super() in a constructor
11634	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateLabelManager.java	908	Avoid unnecessary comparisons in boolean expressions
11635	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
11636	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	41	Use explicit scoping instead of the default package private level
11637	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
11638	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	42	Use explicit scoping instead of the default package private level
11639	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
11640	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
11641	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
11642	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	43	Use explicit scoping instead of the default package private level
11643	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
11644	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	44	Use explicit scoping instead of the default package private level
11645	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	46	It is a good practice to call super() in a constructor
11646	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	56	Parameter 'parent' is not assigned and could be declared final
11647	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	68	Parameter 'pnmldata' is not assigned and could be declared final
11648	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	68	Parameter 'stateGroupData' is not assigned and could be declared final
11649	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	74	Local variable 'PNObjects' could be declared final
11650	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	75	Avoid using while statements without curly braces
11651	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	81	Parameter 'diffObj' is not assigned and could be declared final
11652	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	82	Avoid using if statements without curly braces
11653	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	89	Local variable 'components' could be declared final
11654	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	90	Avoid variables with short names like d
11655	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	90	Local variable 'd' could be declared final
11656	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	91	Avoid variables with short names like x
11657	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	91	Avoid variables with short names like y
11658	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	93	Avoid variables with short names like r
11659	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	93	Local variable 'r' could be declared final
11660	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	96	Avoid using if statements without curly braces
11661	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	98	Avoid using if statements without curly braces
11662	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	104	Parameter 'currentObj' is not assigned and could be declared final
11663	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	106	Local variable 'place' could be declared final
11664	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	109	Avoid using if statements without curly braces
11665	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	122	Avoid using if...else statements without curly braces
11666	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	124	Avoid using if...else statements without curly braces
11667	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	126	Avoid using if...else statements without curly braces
11668	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	127	Avoid using if statements without curly braces
11669	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	174	Avoid excessively long variable names like conditionHasBeenSpecified
11670	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	174	Found 'DD'-anomaly for variable 'conditionHasBeenSpecified' (lines '174'-'177').
11671	src/pipe/modules/queryeditor/gui/performancetrees/valuenodes/labels/StateView.java	177	Found 'DD'-anomaly for variable 'conditionHasBeenSpecified' (lines '177'-'177').
11672	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	1	A high number of imports can indicate a high degree of coupling within an object.
11673	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	54	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11674	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	54	The class 'Common' has a Cyclomatic Complexity of 20 (Highest = 36).
11675	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	56	Avoid reassigning parameters such as 'toolBar1'
11676	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	56	Avoid reassigning parameters such as 'toolBar2'
11677	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	56	Parameter 'actions' is not assigned and could be declared final
11678	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	56	Parameter 'type' is not assigned and could be declared final
11679	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	64	Local variable 'drawButtons' could be declared final
11680	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	91	The String literal "queryEditor" appears 4 times in this file; the first occurrence is on line 83
11681	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	99	Found 'DD'-anomaly for variable 'toolbars' (lines '91'-'92').
11682	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	100	Found 'DD'-anomaly for variable 'toolbars' (lines '92'-'93').
11683	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	116	Avoid really long methods.
11684	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	116	The method 'addIntelligentButton' has a Cyclomatic Complexity of 36.
11685	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	116	The method addIntelligentButton() has an NCSS line count of 103
11686	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	118	Local variable 'selectedIconURL' could be declared final
11687	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	119	Local variable 'selectedIcon' could be declared final
11688	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	121	Avoid variables with short names like b
11689	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	124	Local variable 'actionName' could be declared final
11690	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	127	Local variable 'actionListener' could be declared final
11691	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	129	Avoid really long methods.
11692	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	129	Avoid variables with short names like e
11693	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	129	Parameter 'e' is not assigned and could be declared final
11694	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	129	The method 'actionPerformed' has a Cyclomatic Complexity of 33.
11695	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'127').
11696	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'127').
11697	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'127').
11698	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'131').
11699	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'131').
11700	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'131').
11701	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'136').
11702	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'136').
11703	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'136').
11704	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'140').
11705	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'140').
11706	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'140').
11707	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'144').
11708	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'144').
11709	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'144').
11710	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'148').
11711	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'148').
11712	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'148').
11713	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'152').
11714	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'152').
11715	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'152').
11716	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'156').
11717	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'156').
11718	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'156').
11719	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'160').
11720	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'160').
11721	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'160').
11722	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'164').
11723	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'164').
11724	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'164').
11725	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'168').
11726	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'168').
11727	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'168').
11728	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'172').
11729	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'172').
11730	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'172').
11731	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'176').
11732	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'176').
11733	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'176').
11734	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'180').
11735	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'180').
11736	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'180').
11737	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'184').
11738	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'184').
11739	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'184').
11740	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'188').
11741	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'188').
11742	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'188').
11743	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'192').
11744	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'192').
11745	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'192').
11746	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'196').
11747	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'196').
11748	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'196').
11749	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'200').
11750	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'200').
11751	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'200').
11752	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'204').
11753	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'204').
11754	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'204').
11755	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'208').
11756	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'208').
11757	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'208').
11758	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'212').
11759	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'212').
11760	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'212').
11761	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'216').
11762	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'216').
11763	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'216').
11764	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'220').
11765	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'220').
11766	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'220').
11767	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'224').
11768	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'224').
11769	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'224').
11770	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'228').
11771	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'228').
11772	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'228').
11773	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'232').
11774	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'232').
11775	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'232').
11776	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'236').
11777	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'236').
11778	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	132	Found 'DD'-anomaly for variable 'msg' (lines '124'-'236').
11779	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	133	Position literals first in String comparisons
11780	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	137	Position literals first in String comparisons
11781	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	142	Position literals first in String comparisons
11782	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	142	Position literals first in String comparisons
11783	src/pipe/modules/queryeditor/io/CommonQueryEditor.java	146	Position literals first in String comparisons
11784	src/pipe/modules/queryeditor/io/MacroLoader.java	17	A high number of imports can indicate a high degree of coupling within an object.
11785	src/pipe/modules/queryeditor/io/MacroLoader.java	61	The class 'MacroLoader' has a Cyclomatic Complexity of 15 (Highest = 65).
11786	src/pipe/modules/queryeditor/io/MacroLoader.java	62	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11787	src/pipe/modules/queryeditor/io/MacroLoader.java	93	Avoid really long methods.
11788	src/pipe/modules/queryeditor/io/MacroLoader.java	93	The method 'loadMacroFromXML' has a Cyclomatic Complexity of 19.
11789	src/pipe/modules/queryeditor/io/MacroLoader.java	108	Local variable 'ptmlElements' could be declared final
11790	src/pipe/modules/queryeditor/io/MacroLoader.java	111	Local variable 'ptmlNode' could be declared final
11791	src/pipe/modules/queryeditor/io/MacroLoader.java	114	Local variable 'ptmlElement' could be declared final
11792	src/pipe/modules/queryeditor/io/MacroLoader.java	118	Local variable 'macroDescription' could be declared final
11793	src/pipe/modules/queryeditor/io/MacroLoader.java	119	Local variable 'macroReturnType' could be declared final
11794	src/pipe/modules/queryeditor/io/MacroLoader.java	146	Deeply nested if..then statements are hard to read
11795	src/pipe/modules/queryeditor/io/MacroLoader.java	148	Avoid excessively long variable names like stateLabelsElements
11796	src/pipe/modules/queryeditor/io/MacroLoader.java	164	Avoid excessively long variable names like actionLabelsElements
11797	src/pipe/modules/queryeditor/io/MacroLoader.java	170	Avoid excessively long variable names like actionLabelElement
11798	src/pipe/modules/queryeditor/io/MacroLoader.java	196	Avoid printStackTrace(); use a logger call instead.
11799	src/pipe/modules/queryeditor/io/MacroLoader.java	197	Avoid throwing raw exception types.
11800	src/pipe/modules/queryeditor/io/MacroLoader.java	208	Avoid really long methods.
11801	src/pipe/modules/queryeditor/io/MacroLoader.java	208	The method 'createNode' has a Cyclomatic Complexity of 65.
11802	src/pipe/modules/queryeditor/io/MacroLoader.java	208	The method createNode() has an NCSS line count of 169
11803	src/pipe/modules/queryeditor/io/MacroLoader.java	210	Found 'DD'-anomaly for variable 'nodeID' (lines '210'-'222').
11804	src/pipe/modules/queryeditor/io/MacroLoader.java	211	Found 'DD'-anomaly for variable 'nodeType' (lines '211'-'225').
11805	src/pipe/modules/queryeditor/io/MacroLoader.java	212	Found 'DD'-anomaly for variable 'nodeOperation' (lines '212'-'228').
11806	src/pipe/modules/queryeditor/io/MacroLoader.java	213	Found 'DD'-anomaly for variable 'nodeLabel' (lines '213'-'231').
11807	src/pipe/modules/queryeditor/io/MacroLoader.java	214	Found 'DD'-anomaly for variable 'nodePositionX' (lines '214'-'235').
11808	src/pipe/modules/queryeditor/io/MacroLoader.java	215	Found 'DD'-anomaly for variable 'nodePositionY' (lines '215'-'243').
11809	src/pipe/modules/queryeditor/io/MacroLoader.java	216	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '216'-'261').
11810	src/pipe/modules/queryeditor/io/MacroLoader.java	217	Avoid excessively long variable names like nodeOutgoingArcIDs
11811	src/pipe/modules/queryeditor/io/MacroLoader.java	221	Avoid using if statements without curly braces
11812	src/pipe/modules/queryeditor/io/MacroLoader.java	224	Avoid using if statements without curly braces
11813	src/pipe/modules/queryeditor/io/MacroLoader.java	226	Avoid excessively long variable names like retrievedNodeOperation
11814	src/pipe/modules/queryeditor/io/MacroLoader.java	227	Avoid using if statements without curly braces
11815	src/pipe/modules/queryeditor/io/MacroLoader.java	230	Avoid using if statements without curly braces
11816	src/pipe/modules/queryeditor/io/MacroLoader.java	231	Found 'DU'-anomaly for variable 'nodeLabel' (lines '231'-'432').
11817	src/pipe/modules/queryeditor/io/MacroLoader.java	235	Unnecessary wrapper object creation
11818	src/pipe/modules/queryeditor/io/MacroLoader.java	243	Unnecessary wrapper object creation
11819	src/pipe/modules/queryeditor/io/MacroLoader.java	260	Avoid using if statements without curly braces
11820	src/pipe/modules/queryeditor/io/MacroLoader.java	261	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '261'-'261').
11821	src/pipe/modules/queryeditor/io/MacroLoader.java	286	Found 'DD'-anomaly for variable 'node' (lines '286'-'288').
11822	src/pipe/modules/queryeditor/io/MacroLoader.java	288	Avoid using if...else statements without curly braces
11823	src/pipe/modules/queryeditor/io/MacroLoader.java	290	Avoid using if...else statements without curly braces
11824	src/pipe/modules/queryeditor/io/MacroLoader.java	292	Avoid using if...else statements without curly braces
11825	src/pipe/modules/queryeditor/io/MacroLoader.java	294	Avoid using if...else statements without curly braces
11826	src/pipe/modules/queryeditor/io/MacroLoader.java	296	Avoid using if...else statements without curly braces
11827	src/pipe/modules/queryeditor/io/MacroLoader.java	347	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
11828	src/pipe/modules/queryeditor/io/MacroLoader.java	356	These nested if statements could be combined
11829	src/pipe/modules/queryeditor/io/MacroLoader.java	455	Position literals first in String comparisons
11830	src/pipe/modules/queryeditor/io/MacroLoader.java	473	Found 'DD'-anomaly for variable 'actionLabel' (lines '592'-'595').
11831	src/pipe/modules/queryeditor/io/MacroTransformer.java	32	Avoid unnecessary constructors - the compiler will generate these for you
11832	src/pipe/modules/queryeditor/io/MacroTransformer.java	32	Document empty constructor
11833	src/pipe/modules/queryeditor/io/MacroTransformer.java	47	Parameter 'filename' is not assigned and could be declared final
11834	src/pipe/modules/queryeditor/io/MacroTransformer.java	48	Avoid excessively long variable names like outputObjectArrayList
11835	src/pipe/modules/queryeditor/io/MacroTransformer.java	48	Found 'DD'-anomaly for variable 'outputObjectArrayList' (lines '48'-'63').
11836	src/pipe/modules/queryeditor/io/MacroTransformer.java	49	Found 'DD'-anomaly for variable 'document' (lines '49'-'68').
11837	src/pipe/modules/queryeditor/io/MacroTransformer.java	53	Local variable 'xsltSource' could be declared final
11838	src/pipe/modules/queryeditor/io/MacroTransformer.java	54	The String literal "file.separator" appears 5 times in this file; the first occurrence is on line 54
11839	src/pipe/modules/queryeditor/io/MacroTransformer.java	59	Avoid using if statements without curly braces
11840	src/pipe/modules/queryeditor/io/MacroTransformer.java	60	System.out.print is used
11841	src/pipe/modules/queryeditor/io/MacroTransformer.java	62	Local variable 'transformer' could be declared final
11842	src/pipe/modules/queryeditor/io/MacroTransformer.java	65	Local variable 'source' could be declared final
11843	src/pipe/modules/queryeditor/io/MacroTransformer.java	66	Local variable 'result' could be declared final
11844	src/pipe/modules/queryeditor/io/MacroTransformer.java	70	System.out.print is used
11845	src/pipe/modules/queryeditor/io/MacroTransformer.java	73	System.out.print is used
11846	src/pipe/modules/queryeditor/io/MacroTransformer.java	76	System.out.print is used
11847	src/pipe/modules/queryeditor/io/MacroTransformer.java	79	System.out.print is used
11848	src/pipe/modules/queryeditor/io/MacroTransformer.java	83	Avoid using if statements without curly braces
11849	src/pipe/modules/queryeditor/io/MacroTransformer.java	99	Parameter 'ptmlFileName' is not assigned and could be declared final
11850	src/pipe/modules/queryeditor/io/MacroTransformer.java	100	Found 'DD'-anomaly for variable 'document' (lines '100'-'106').
11851	src/pipe/modules/queryeditor/io/MacroTransformer.java	103	Avoid excessively long variable names like documentBuilderFactory
11852	src/pipe/modules/queryeditor/io/MacroTransformer.java	103	Local variable 'documentBuilderFactory' could be declared final
11853	src/pipe/modules/queryeditor/io/MacroTransformer.java	128	Parameter 'ptmlFile' is not assigned and could be declared final
11854	src/pipe/modules/queryeditor/io/MacroTransformer.java	129	Found 'DD'-anomaly for variable 'document' (lines '129'-'135').
11855	src/pipe/modules/queryeditor/io/MacroTransformer.java	132	Avoid excessively long variable names like documentBuilderFactory
11856	src/pipe/modules/queryeditor/io/MacroWriter.java	46	The class 'MacroWriter' has a Cyclomatic Complexity of 8 (Highest = 12).
11857	src/pipe/modules/queryeditor/io/MacroWriter.java	47	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11858	src/pipe/modules/queryeditor/io/MacroWriter.java	50	Avoid using implementation types like 'HashMap'; use the interface instead
11859	src/pipe/modules/queryeditor/io/MacroWriter.java	50	Avoid using implementation types like 'HashMap'; use the interface instead
11860	src/pipe/modules/queryeditor/io/MacroWriter.java	56	Avoid really long methods.
11861	src/pipe/modules/queryeditor/io/MacroWriter.java	56	The method 'saveMacro' has a Cyclomatic Complexity of 12.
11862	src/pipe/modules/queryeditor/io/MacroWriter.java	65	Found 'DD'-anomaly for variable 'macroFile' (lines '65'-'75').
11863	src/pipe/modules/queryeditor/io/MacroWriter.java	65	Found 'DD'-anomaly for variable 'macroFile' (lines '65'-'79').
11864	src/pipe/modules/queryeditor/io/MacroWriter.java	67	Position literals first in String comparisons
11865	src/pipe/modules/queryeditor/io/MacroWriter.java	70	Local variable 'macroSaveLocation' could be declared final
11866	src/pipe/modules/queryeditor/io/MacroWriter.java	71	Avoid using if statements without curly braces
11867	src/pipe/modules/queryeditor/io/MacroWriter.java	74	Local variable 'macroPath' could be declared final
11868	src/pipe/modules/queryeditor/io/MacroWriter.java	82	Found 'DD'-anomaly for variable 'ptDOM' (lines '82'-'91').
11869	src/pipe/modules/queryeditor/io/MacroWriter.java	83	Found 'DD'-anomaly for variable 'xsltSource' (lines '83'-'142').
11870	src/pipe/modules/queryeditor/io/MacroWriter.java	84	Found 'DD'-anomaly for variable 'transformer' (lines '84'-'153').
11871	src/pipe/modules/queryeditor/io/MacroWriter.java	89	Local variable 'builderFactory' could be declared final
11872	src/pipe/modules/queryeditor/io/MacroWriter.java	90	Local variable 'builder' could be declared final
11873	src/pipe/modules/queryeditor/io/MacroWriter.java	94	Local variable 'ptmlElement' could be declared final
11874	src/pipe/modules/queryeditor/io/MacroWriter.java	108	Avoid variables with short names like i
11875	src/pipe/modules/queryeditor/io/MacroWriter.java	111	Avoid excessively long variable names like nodeNotProcessedYet
11876	src/pipe/modules/queryeditor/io/MacroWriter.java	122	Avoid excessively long variable names like nodeProcessedAlready
11877	src/pipe/modules/queryeditor/io/MacroWriter.java	122	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '122'-'125').
11878	src/pipe/modules/queryeditor/io/MacroWriter.java	122	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '122'-'129').
11879	src/pipe/modules/queryeditor/io/MacroWriter.java	123	This statement may have some unnecessary parentheses
11880	src/pipe/modules/queryeditor/io/MacroWriter.java	127	This statement may have some unnecessary parentheses
11881	src/pipe/modules/queryeditor/io/MacroWriter.java	132	Avoid using if statements without curly braces
11882	src/pipe/modules/queryeditor/io/MacroWriter.java	145	The String literal "file.separator" appears 4 times in this file; the first occurrence is on line 145
11883	src/pipe/modules/queryeditor/io/MacroWriter.java	156	Avoid excessively long variable names like outputObjectArrayList
11884	src/pipe/modules/queryeditor/io/MacroWriter.java	163	System.out.print is used
11885	src/pipe/modules/queryeditor/io/MacroWriter.java	164	The String literal " : MacroWriter Class : modules.queryeditor.io Package" appears 4 times in this file; the first occurrence is on line 164
11886	src/pipe/modules/queryeditor/io/MacroWriter.java	164	The String literal " : filename=\"" appears 4 times in this file; the first occurrence is on line 164
11887	src/pipe/modules/queryeditor/io/MacroWriter.java	165	The String literal "\" xslt=\"" appears 4 times in this file; the first occurrence is on line 165
11888	src/pipe/modules/queryeditor/io/MacroWriter.java	166	The String literal "\" transformer=\"" appears 4 times in this file; the first occurrence is on line 166
11889	src/pipe/modules/queryeditor/io/MacroWriter.java	170	System.out.print is used
11890	src/pipe/modules/queryeditor/io/MacroWriter.java	176	System.out.print is used
11891	src/pipe/modules/queryeditor/io/MacroWriter.java	183	System.out.print is used
11892	src/pipe/modules/queryeditor/io/MacroWriter.java	194	The method 'createNodeElement' has a Cyclomatic Complexity of 12.
11893	src/pipe/modules/queryeditor/io/MacroWriter.java	231	Avoid if (x != y) ..; else ..;
11894	src/pipe/modules/queryeditor/io/MacroWriter.java	232	Avoid using if...else statements without curly braces
11895	src/pipe/modules/queryeditor/io/MacroWriter.java	233	Avoid using if...else statements without curly braces
11896	src/pipe/modules/queryeditor/io/MacroWriter.java	240	Avoid excessively long variable names like outgoingArcsElement
11897	src/pipe/modules/queryeditor/io/MacroWriter.java	242	Avoid excessively long variable names like nodeOutgoingArcIDs
11898	src/pipe/modules/queryeditor/io/MacroWriter.java	243	Avoid variables with short names like i
11899	src/pipe/modules/queryeditor/io/MacroWriter.java	262	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '262'-'265').
11900	src/pipe/modules/queryeditor/io/MacroWriter.java	262	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '262'-'269').
11901	src/pipe/modules/queryeditor/io/MacroWriter.java	263	This statement may have some unnecessary parentheses
11902	src/pipe/modules/queryeditor/io/MacroWriter.java	267	This statement may have some unnecessary parentheses
11903	src/pipe/modules/queryeditor/io/MacroWriter.java	271	Avoid using if statements without curly braces
11904	src/pipe/modules/queryeditor/io/MacroWriter.java	294	Avoid if (x != y) ..; else ..;
11905	src/pipe/modules/queryeditor/io/MacroWriter.java	295	Avoid using if...else statements without curly braces
11906	src/pipe/modules/queryeditor/io/MacroWriter.java	296	Avoid using if...else statements without curly braces
11907	src/pipe/modules/queryeditor/io/MacroWriter.java	315	Found 'DU'-anomaly for variable 'point' (lines '315'-'320').
11908	src/pipe/modules/queryeditor/io/MacroWriter.java	325	Avoid variables with short names like x
11909	src/pipe/modules/queryeditor/io/MacroWriter.java	326	Avoid variables with short names like y
11910	src/pipe/modules/queryeditor/io/MacroWriter.java	330	Avoid variables with short names like id
11911	src/pipe/modules/queryeditor/io/MacroWriter.java	336	Avoid using if statements without curly braces
11912	src/pipe/modules/queryeditor/io/MacroWriter.java	337	Prefer StringBuffer over += for concatenating strings
11913	src/pipe/modules/queryeditor/io/MacroWriter.java	338	Avoid using if statements without curly braces
11914	src/pipe/modules/queryeditor/io/MacroWriter.java	339	Prefer StringBuffer over += for concatenating strings
11915	src/pipe/modules/queryeditor/io/MacroWriter.java	354	Found 'DU'-anomaly for variable 'retrievedStateLabels' (lines '354'-'420').
11916	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	43	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
11917	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	43	The class 'PerformanceTreeExporter' has a Cyclomatic Complexity of 7 (Highest = 14).
11918	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	50	Avoid variables with short names like g
11919	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	50	Parameter 'format' is not assigned and could be declared final
11920	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	50	Parameter 'g' is not assigned and could be declared final
11921	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	50	The method 'exportQueryView' has a Cyclomatic Complexity of 14.
11922	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	51	Found 'DU'-anomaly for variable 'gridEnabled' (lines '51'-'113').
11923	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	51	Local variable 'gridEnabled' could be declared final
11924	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	52	Found 'DD'-anomaly for variable 'filename' (lines '52'-'58').
11925	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	52	Found 'DD'-anomaly for variable 'filename' (lines '52'-'85').
11926	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	52	Found 'DD'-anomaly for variable 'filename' (lines '52'-'90').
11927	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	52	Found 'DU'-anomaly for variable 'filename' (lines '52'-'113').
11928	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	54	Avoid using if statements without curly braces
11929	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	55	A method should have only one exit point, and that should be the last statement in the method
11930	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	60	Local variable 'dotpos' could be declared final
11931	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	64	A switch with less than 3 branches is inefficient, use a if statement instead.
11932	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	64	Switch statements should have a default label
11933	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	66	Prefer StringBuffer over += for concatenating strings
11934	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	66	The String literal "png" appears 6 times in this file; the first occurrence is on line 66
11935	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	69	Prefer StringBuffer over += for concatenating strings
11936	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	69	The String literal "eps" appears 4 times in this file; the first occurrence is on line 69
11937	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	79	Avoid using if statements without curly braces
11938	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	83	Switch statements should have a default label
11939	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	86	Avoid using if statements without curly braces
11940	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	91	Avoid using if statements without curly braces
11941	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	106	Avoid using if statements without curly braces
11942	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	112	Avoid unnecessary return statements
11943	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	115	Avoid variables with short names like g
11944	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	115	Parameter 'format' is not assigned and could be declared final
11945	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	115	Parameter 'g' is not assigned and could be declared final
11946	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	115	The method 'exportMacroView' has a Cyclomatic Complexity of 14.
11947	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	116	Found 'DU'-anomaly for variable 'gridEnabled' (lines '116'-'178').
11948	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	116	Local variable 'gridEnabled' could be declared final
11949	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	117	Found 'DD'-anomaly for variable 'filename' (lines '117'-'123').
11950	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	117	Found 'DD'-anomaly for variable 'filename' (lines '117'-'150').
11951	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	117	Found 'DD'-anomaly for variable 'filename' (lines '117'-'155').
11952	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	117	Found 'DU'-anomaly for variable 'filename' (lines '117'-'178').
11953	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	120	A method should have only one exit point, and that should be the last statement in the method
11954	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	125	Local variable 'dotpos' could be declared final
11955	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	129	A switch with less than 3 branches is inefficient, use a if statement instead.
11956	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	129	Switch statements should have a default label
11957	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	131	Prefer StringBuffer over += for concatenating strings
11958	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	134	Prefer StringBuffer over += for concatenating strings
11959	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	148	Switch statements should have a default label
11960	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	177	Avoid unnecessary return statements
11961	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	187	Avoid variables with short names like g
11962	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	187	Parameter 'filename' is not assigned and could be declared final
11963	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	189	Local variable 'flavour' could be declared final
11964	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	195	Avoid throwing raw exception types.
11965	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	197	Avoid variables with short names like f
11966	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	212	Avoid variables with short names like g
11967	src/pipe/modules/queryeditor/io/PerformanceTreeExporter.java	216	Avoid throwing raw exception types.
11968	src/pipe/modules/queryeditor/io/QueryData.java	11	This class has a bunch of public methods and attributes
11969	src/pipe/modules/queryeditor/io/QueryData.java	43	Avoid really long classes.
11970	src/pipe/modules/queryeditor/io/QueryData.java	43	The class 'QueryData' has a Cyclomatic Complexity of 3 (Highest = 18).
11971	src/pipe/modules/queryeditor/io/QueryData.java	44	This class has too many methods, consider refactoring it.
11972	src/pipe/modules/queryeditor/io/QueryData.java	46	Possible unsafe assignment to a non-final static field in a constructor.
11973	src/pipe/modules/queryeditor/io/QueryData.java	49	Avoid using implementation types like 'ArrayList'; use the interface instead
11974	src/pipe/modules/queryeditor/io/QueryData.java	49	Avoid using implementation types like 'ArrayList'; use the interface instead
11975	src/pipe/modules/queryeditor/io/QueryData.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
11976	src/pipe/modules/queryeditor/io/QueryData.java	50	Avoid using implementation types like 'ArrayList'; use the interface instead
11977	src/pipe/modules/queryeditor/io/QueryData.java	50	Avoid using implementation types like 'ArrayList'; use the interface instead
11978	src/pipe/modules/queryeditor/io/QueryData.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
11979	src/pipe/modules/queryeditor/io/QueryData.java	52	Avoid using implementation types like 'ArrayList'; use the interface instead
11980	src/pipe/modules/queryeditor/io/QueryData.java	52	Avoid using implementation types like 'ArrayList'; use the interface instead
11981	src/pipe/modules/queryeditor/io/QueryData.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
11982	src/pipe/modules/queryeditor/io/QueryData.java	57	Avoid using implementation types like 'HashMap'; use the interface instead
11983	src/pipe/modules/queryeditor/io/QueryData.java	57	Avoid using implementation types like 'HashMap'; use the interface instead
11984	src/pipe/modules/queryeditor/io/QueryData.java	57	Found non-transient, non-static member. Please mark as transient or provide accessors.
11985	src/pipe/modules/queryeditor/io/QueryData.java	60	Avoid using implementation types like 'ArrayList'; use the interface instead
11986	src/pipe/modules/queryeditor/io/QueryData.java	60	Avoid using implementation types like 'ArrayList'; use the interface instead
11987	src/pipe/modules/queryeditor/io/QueryData.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
11988	src/pipe/modules/queryeditor/io/QueryData.java	77	It is a good practice to call super() in a constructor
11989	src/pipe/modules/queryeditor/io/QueryData.java	79	Local variable 'transform' could be declared final
11990	src/pipe/modules/queryeditor/io/QueryData.java	80	Local variable 'temp' could be declared final
11991	src/pipe/modules/queryeditor/io/QueryData.java	89	It is a good practice to call super() in a constructor
11992	src/pipe/modules/queryeditor/io/QueryData.java	100	Assigning an Object to null is a code smell. Consider refactoring.
11993	src/pipe/modules/queryeditor/io/QueryData.java	123	Avoid idempotent operations (like assigning a variable to itself).
11994	src/pipe/modules/queryeditor/io/QueryData.java	143	A method should have only one exit point, and that should be the last statement in the method
11995	src/pipe/modules/queryeditor/io/QueryData.java	143	Avoid using if...else statements without curly braces
11996	src/pipe/modules/queryeditor/io/QueryData.java	145	A method should have only one exit point, and that should be the last statement in the method
11997	src/pipe/modules/queryeditor/io/QueryData.java	145	Avoid using if...else statements without curly braces
11998	src/pipe/modules/queryeditor/io/QueryData.java	146	Avoid using if...else statements without curly braces
11999	src/pipe/modules/queryeditor/io/QueryData.java	174	The method 'addNode' has a Cyclomatic Complexity of 12.
12000	src/pipe/modules/queryeditor/io/QueryData.java	176	Found 'DD'-anomaly for variable 'unique' (lines '176'-'188').
12001	src/pipe/modules/queryeditor/io/QueryData.java	176	Found 'DU'-anomaly for variable 'unique' (lines '176'-'250').
12002	src/pipe/modules/queryeditor/io/QueryData.java	188	Found 'DD'-anomaly for variable 'unique' (lines '188'-'188').
12003	src/pipe/modules/queryeditor/io/QueryData.java	216	Avoid variables with short names like it
12004	src/pipe/modules/queryeditor/io/QueryData.java	225	Local variable 'arcID' could be declared final
12005	src/pipe/modules/queryeditor/io/QueryData.java	238	Local variable 'arcID' could be declared final
12006	src/pipe/modules/queryeditor/io/QueryData.java	246	A method should have only one exit point, and that should be the last statement in the method
12007	src/pipe/modules/queryeditor/io/QueryData.java	260	Local variable 'updatedNodeID' could be declared final
12008	src/pipe/modules/queryeditor/io/QueryData.java	283	The method 'deleteNode' has a Cyclomatic Complexity of 10.
12009	src/pipe/modules/queryeditor/io/QueryData.java	307	Avoid variables with short names like it
12010	src/pipe/modules/queryeditor/io/QueryData.java	332	Avoid using if statements without curly braces
12011	src/pipe/modules/queryeditor/io/QueryData.java	332	These nested if statements could be combined
12012	src/pipe/modules/queryeditor/io/QueryData.java	339	Avoid using if statements without curly braces
12013	src/pipe/modules/queryeditor/io/QueryData.java	339	These nested if statements could be combined
12014	src/pipe/modules/queryeditor/io/QueryData.java	379	Found 'DD'-anomaly for variable 'unique' (lines '379'-'390').
12015	src/pipe/modules/queryeditor/io/QueryData.java	379	Found 'DU'-anomaly for variable 'unique' (lines '379'-'417').
12016	src/pipe/modules/queryeditor/io/QueryData.java	390	Found 'DD'-anomaly for variable 'unique' (lines '390'-'390').
12017	src/pipe/modules/queryeditor/io/QueryData.java	413	A method should have only one exit point, and that should be the last statement in the method
12018	src/pipe/modules/queryeditor/io/QueryData.java	484	Avoid unused private methods such as 'printDataContents()'.
12019	src/pipe/modules/queryeditor/io/QueryData.java	486	System.out.print is used
12020	src/pipe/modules/queryeditor/io/QueryData.java	487	Avoid variables with short names like i
12021	src/pipe/modules/queryeditor/io/QueryData.java	493	System.out.print is used
12022	src/pipe/modules/queryeditor/io/QueryData.java	497	System.out.print is used
12023	src/pipe/modules/queryeditor/io/QueryData.java	501	These nested if statements could be combined
12024	src/pipe/modules/queryeditor/io/QueryData.java	503	Avoid variables with short names like j
12025	src/pipe/modules/queryeditor/io/QueryData.java	507	System.out.print is used
12026	src/pipe/modules/queryeditor/io/QueryData.java	512	System.out.print is used
12027	src/pipe/modules/queryeditor/io/QueryData.java	514	Avoid variables with short names like k
12028	src/pipe/modules/queryeditor/io/QueryData.java	564	Found 'DD'-anomaly for variable 'returnNode' (lines '564'-'571').
12029	src/pipe/modules/queryeditor/io/QueryData.java	570	Avoid using if statements without curly braces
12030	src/pipe/modules/queryeditor/io/QueryData.java	571	Found 'DD'-anomaly for variable 'returnNode' (lines '571'-'571').
12031	src/pipe/modules/queryeditor/io/QueryData.java	588	Found 'DD'-anomaly for variable 'returnArray' (lines '588'-'590').
12032	src/pipe/modules/queryeditor/io/QueryData.java	589	Avoid using for statements without curly braces
12033	src/pipe/modules/queryeditor/io/QueryData.java	590	Found 'DD'-anomaly for variable 'returnArray' (lines '590'-'590').
12034	src/pipe/modules/queryeditor/io/QueryData.java	604	Found 'DD'-anomaly for variable 'returnArc' (lines '604'-'611').
12035	src/pipe/modules/queryeditor/io/QueryData.java	610	Avoid using if statements without curly braces
12036	src/pipe/modules/queryeditor/io/QueryData.java	611	Found 'DD'-anomaly for variable 'returnArc' (lines '611'-'611').
12037	src/pipe/modules/queryeditor/io/QueryData.java	624	Found 'DD'-anomaly for variable 'returnArray' (lines '624'-'627').
12038	src/pipe/modules/queryeditor/io/QueryData.java	626	Avoid using for statements without curly braces
12039	src/pipe/modules/queryeditor/io/QueryData.java	627	Found 'DD'-anomaly for variable 'returnArray' (lines '627'-'627').
12040	src/pipe/modules/queryeditor/io/QueryData.java	662	Avoid excessively long variable names like sortedActionLabels
12041	src/pipe/modules/queryeditor/io/QueryData.java	663	Consider simply returning the value vs storing it in local variable 'sortedActionLabels'
12042	src/pipe/modules/queryeditor/io/QueryData.java	674	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
12043	src/pipe/modules/queryeditor/io/QueryData.java	679	A method should have only one exit point, and that should be the last statement in the method
12044	src/pipe/modules/queryeditor/io/QueryData.java	679	Consider simply returning the value vs storing it in local variable 'sortedList'
12045	src/pipe/modules/queryeditor/io/QueryData.java	681	Avoid using if...else statements without curly braces
12046	src/pipe/modules/queryeditor/io/QueryData.java	691	Avoid excessively long variable names like labelAlreadyExists
12047	src/pipe/modules/queryeditor/io/QueryData.java	691	Found 'DD'-anomaly for variable 'labelAlreadyExists' (lines '691'-'697').
12048	src/pipe/modules/queryeditor/io/QueryData.java	696	Avoid using if statements without curly braces
12049	src/pipe/modules/queryeditor/io/QueryData.java	697	Found 'DD'-anomaly for variable 'labelAlreadyExists' (lines '697'-'697').
12050	src/pipe/modules/queryeditor/io/QueryData.java	722	Found 'DD'-anomaly for variable 'stateLabelNames' (lines '722'-'729').
12051	src/pipe/modules/queryeditor/io/QueryData.java	743	Avoid if (x != y) ..; else ..;
12052	src/pipe/modules/queryeditor/io/QueryData.java	744	Avoid using if...else statements without curly braces
12053	src/pipe/modules/queryeditor/io/QueryData.java	747	Avoid excessively long variable names like statesAssignedToLabel
12054	src/pipe/modules/queryeditor/io/QueryData.java	748	Consider simply returning the value vs storing it in local variable 'statesAssignedToLabel'
12055	src/pipe/modules/queryeditor/io/QueryData.java	770	Avoid excessively long variable names like stateLabelDefinition
12056	src/pipe/modules/queryeditor/io/QueryData.java	771	Avoid excessively long variable names like assignedStateGroups
12057	src/pipe/modules/queryeditor/io/QueryData.java	776	Position literals first in String comparisons
12058	src/pipe/modules/queryeditor/io/QueryData.java	778	Prefer StringBuffer over += for concatenating strings
12059	src/pipe/modules/queryeditor/io/QueryData.java	852	These nested if statements could be combined
12060	src/pipe/modules/queryeditor/io/QueryData.java	960	Found 'DD'-anomaly for variable 'nodeAlreadyCreated' (lines '960'-'966').
12061	src/pipe/modules/queryeditor/io/QueryData.java	966	Found 'DD'-anomaly for variable 'nodeAlreadyCreated' (lines '966'-'966').
12062	src/pipe/modules/queryeditor/io/QueryData.java	981	Found 'DD'-anomaly for variable 'nodeAlreadyCreated' (lines '981'-'987').
12063	src/pipe/modules/queryeditor/io/QueryData.java	987	Found 'DD'-anomaly for variable 'nodeAlreadyCreated' (lines '987'-'987').
12064	src/pipe/modules/queryeditor/io/QueryData.java	996	Avoid really long methods.
12065	src/pipe/modules/queryeditor/io/QueryData.java	996	The method 'printQueryDataContents' has a Cyclomatic Complexity of 18.
12066	src/pipe/modules/queryeditor/io/QueryData.java	996	The method printQueryDataContents() has an NPath complexity of 1944
12067	src/pipe/modules/queryeditor/io/QueryData.java	1009	The String literal " and type " appears 5 times in this file; the first occurrence is on line 1,009
12068	src/pipe/modules/queryeditor/io/QueryData.java	1021	These nested if statements could be combined
12069	src/pipe/modules/queryeditor/io/QueryData.java	1125	The method 'checkCurrentData' has a Cyclomatic Complexity of 15.
12070	src/pipe/modules/queryeditor/io/QueryData.java	1125	The method checkCurrentData() has an NPath complexity of 291
12071	src/pipe/modules/queryeditor/io/QueryData.java	1148	Position literals first in String comparisons
12072	src/pipe/modules/queryeditor/io/QueryData.java	1160	Avoid if (x != y) ..; else ..;
12073	src/pipe/modules/queryeditor/io/QueryData.java	1164	Position literals first in String comparisons
12074	src/pipe/modules/queryeditor/io/QueryData.java	1182	Avoid if (x != y) ..; else ..;
12075	src/pipe/modules/queryeditor/io/QueryData.java	1186	Position literals first in String comparisons
12076	src/pipe/modules/queryeditor/io/QueryData.java	1229	Consider simply returning the value vs storing it in local variable 'macroNamesList'
12077	src/pipe/modules/queryeditor/io/QueryData.java	1237	Consider simply returning the value vs storing it in local variable 'macroDef'
12078	src/pipe/modules/queryeditor/io/QueryData.java	1263	Avoid unnecessary if..then..else statements when returning a boolean
12079	src/pipe/modules/queryeditor/io/QueryData.java	1269	Object clone() should be implemented with super.clone()
12080	src/pipe/modules/queryeditor/io/QueryData.java	1269	clone() method should throw CloneNotSupportedException
12081	src/pipe/modules/queryeditor/io/QueryData.java	1272	Avoid idempotent operations (like assigning a variable to itself).
12082	src/pipe/modules/queryeditor/io/QueryLoader.java	10	A high number of imports can indicate a high degree of coupling within an object.
12083	src/pipe/modules/queryeditor/io/QueryLoader.java	56	The class 'QueryLoader' has a Cyclomatic Complexity of 22 (Highest = 69).
12084	src/pipe/modules/queryeditor/io/QueryLoader.java	57	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
12085	src/pipe/modules/queryeditor/io/QueryLoader.java	70	The method 'loadQueryFromXML' has a Cyclomatic Complexity of 17.
12086	src/pipe/modules/queryeditor/io/QueryLoader.java	81	Local variable 'ptmlElements' could be declared final
12087	src/pipe/modules/queryeditor/io/QueryLoader.java	84	Local variable 'ptmlNode' could be declared final
12088	src/pipe/modules/queryeditor/io/QueryLoader.java	87	Local variable 'ptmlElement' could be declared final
12089	src/pipe/modules/queryeditor/io/QueryLoader.java	90	Local variable 'treeElements' could be declared final
12090	src/pipe/modules/queryeditor/io/QueryLoader.java	93	Local variable 'treeNode' could be declared final
12091	src/pipe/modules/queryeditor/io/QueryLoader.java	97	Deeply nested if..then statements are hard to read
12092	src/pipe/modules/queryeditor/io/QueryLoader.java	97	The String literal "node" appears 4 times in this file; the first occurrence is on line 97
12093	src/pipe/modules/queryeditor/io/QueryLoader.java	106	Avoid excessively long variable names like stateLabelsElements
12094	src/pipe/modules/queryeditor/io/QueryLoader.java	113	Deeply nested if..then statements are hard to read
12095	src/pipe/modules/queryeditor/io/QueryLoader.java	122	Avoid excessively long variable names like actionLabelsElements
12096	src/pipe/modules/queryeditor/io/QueryLoader.java	128	Avoid excessively long variable names like actionLabelElement
12097	src/pipe/modules/queryeditor/io/QueryLoader.java	129	Deeply nested if..then statements are hard to read
12098	src/pipe/modules/queryeditor/io/QueryLoader.java	154	Avoid throwing raw exception types.
12099	src/pipe/modules/queryeditor/io/QueryLoader.java	165	Avoid really long methods.
12100	src/pipe/modules/queryeditor/io/QueryLoader.java	165	The method 'createNode' has a Cyclomatic Complexity of 69.
12101	src/pipe/modules/queryeditor/io/QueryLoader.java	165	The method createNode() has an NCSS line count of 178
12102	src/pipe/modules/queryeditor/io/QueryLoader.java	165	The method createNode() has an NPath complexity of 598904960
12103	src/pipe/modules/queryeditor/io/QueryLoader.java	167	Found 'DD'-anomaly for variable 'nodeID' (lines '167'-'179').
12104	src/pipe/modules/queryeditor/io/QueryLoader.java	168	Found 'DD'-anomaly for variable 'nodeType' (lines '168'-'182').
12105	src/pipe/modules/queryeditor/io/QueryLoader.java	169	Found 'DD'-anomaly for variable 'nodeOperation' (lines '169'-'185').
12106	src/pipe/modules/queryeditor/io/QueryLoader.java	170	Found 'DD'-anomaly for variable 'nodeLabel' (lines '170'-'188').
12107	src/pipe/modules/queryeditor/io/QueryLoader.java	171	Found 'DD'-anomaly for variable 'nodePositionX' (lines '171'-'192').
12108	src/pipe/modules/queryeditor/io/QueryLoader.java	172	Found 'DD'-anomaly for variable 'nodePositionY' (lines '172'-'200').
12109	src/pipe/modules/queryeditor/io/QueryLoader.java	173	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '173'-'218').
12110	src/pipe/modules/queryeditor/io/QueryLoader.java	174	Avoid excessively long variable names like nodeOutgoingArcIDs
12111	src/pipe/modules/queryeditor/io/QueryLoader.java	178	Avoid using if statements without curly braces
12112	src/pipe/modules/queryeditor/io/QueryLoader.java	180	The String literal "type" appears 4 times in this file; the first occurrence is on line 180
12113	src/pipe/modules/queryeditor/io/QueryLoader.java	181	Avoid using if statements without curly braces
12114	src/pipe/modules/queryeditor/io/QueryLoader.java	183	Avoid excessively long variable names like retrievedNodeOperation
12115	src/pipe/modules/queryeditor/io/QueryLoader.java	184	Avoid using if statements without curly braces
12116	src/pipe/modules/queryeditor/io/QueryLoader.java	186	The String literal "label" appears 5 times in this file; the first occurrence is on line 186
12117	src/pipe/modules/queryeditor/io/QueryLoader.java	187	Avoid using if statements without curly braces
12118	src/pipe/modules/queryeditor/io/QueryLoader.java	192	Unnecessary wrapper object creation
12119	src/pipe/modules/queryeditor/io/QueryLoader.java	200	Unnecessary wrapper object creation
12120	src/pipe/modules/queryeditor/io/QueryLoader.java	217	Avoid using if statements without curly braces
12121	src/pipe/modules/queryeditor/io/QueryLoader.java	218	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '218'-'218').
12122	src/pipe/modules/queryeditor/io/QueryLoader.java	220	The String literal "outgoingArcs" appears 4 times in this file; the first occurrence is on line 220
12123	src/pipe/modules/queryeditor/io/QueryLoader.java	231	The String literal "arc" appears 4 times in this file; the first occurrence is on line 231
12124	src/pipe/modules/queryeditor/io/QueryLoader.java	243	Found 'DD'-anomaly for variable 'node' (lines '243'-'245').
12125	src/pipe/modules/queryeditor/io/QueryLoader.java	245	Avoid using if...else statements without curly braces
12126	src/pipe/modules/queryeditor/io/QueryLoader.java	247	Avoid using if...else statements without curly braces
12127	src/pipe/modules/queryeditor/io/QueryLoader.java	249	Avoid using if...else statements without curly braces
12128	src/pipe/modules/queryeditor/io/QueryLoader.java	251	Avoid using if...else statements without curly braces
12129	src/pipe/modules/queryeditor/io/QueryLoader.java	253	Avoid using if...else statements without curly braces
12130	src/pipe/modules/queryeditor/io/QueryLoader.java	307	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
12131	src/pipe/modules/queryeditor/io/QueryLoader.java	315	These nested if statements could be combined
12132	src/pipe/modules/queryeditor/io/QueryLoader.java	321	These nested if statements could be combined
12133	src/pipe/modules/queryeditor/io/QueryLoader.java	426	Position literals first in String comparisons
12134	src/pipe/modules/queryeditor/io/QueryLoader.java	444	Found 'DD'-anomaly for variable 'actionLabel' (lines '561'-'564').
12135	src/pipe/modules/queryeditor/io/QueryLoader.java	549	Avoid really long methods.
12136	src/pipe/modules/queryeditor/io/QueryLoader.java	549	Avoid reassigning parameters such as 'macro'
12137	src/pipe/modules/queryeditor/io/QueryLoader.java	549	Avoid reassigning parameters such as 'macro'
12138	src/pipe/modules/queryeditor/io/QueryLoader.java	549	The method 'createMacroNode' has a Cyclomatic Complexity of 67.
12139	src/pipe/modules/queryeditor/io/QueryLoader.java	549	The method createMacroNode() has an NCSS line count of 175
12140	src/pipe/modules/queryeditor/io/QueryLoader.java	551	Found 'DD'-anomaly for variable 'nodeID' (lines '668'-'680').
12141	src/pipe/modules/queryeditor/io/QueryLoader.java	552	Found 'DD'-anomaly for variable 'nodeType' (lines '669'-'683').
12142	src/pipe/modules/queryeditor/io/QueryLoader.java	553	Found 'DD'-anomaly for variable 'nodeOperation' (lines '670'-'686').
12143	src/pipe/modules/queryeditor/io/QueryLoader.java	554	Found 'DD'-anomaly for variable 'nodeLabel' (lines '671'-'689').
12144	src/pipe/modules/queryeditor/io/QueryLoader.java	555	Found 'DD'-anomaly for variable 'nodePositionX' (lines '672'-'693').
12145	src/pipe/modules/queryeditor/io/QueryLoader.java	556	Found 'DD'-anomaly for variable 'nodePositionY' (lines '673'-'701').
12146	src/pipe/modules/queryeditor/io/QueryLoader.java	557	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '674'-'719').
12147	src/pipe/modules/queryeditor/io/QueryLoader.java	572	Found 'DU'-anomaly for variable 'nodeLabel' (lines '689'-'897').
12148	src/pipe/modules/queryeditor/io/QueryLoader.java	576	Unnecessary wrapper object creation
12149	src/pipe/modules/queryeditor/io/QueryLoader.java	584	Unnecessary wrapper object creation
12150	src/pipe/modules/queryeditor/io/QueryLoader.java	602	Found 'DD'-anomaly for variable 'nodeIncomingArcID' (lines '719'-'719').
12151	src/pipe/modules/queryeditor/io/QueryLoader.java	627	Found 'DD'-anomaly for variable 'node' (lines '744'-'746').
12152	src/pipe/modules/queryeditor/io/QueryLoader.java	693	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
12153	src/pipe/modules/queryeditor/io/QueryLoader.java	702	These nested if statements could be combined
12154	src/pipe/modules/queryeditor/io/QueryLoader.java	786	Avoid really long methods.
12155	src/pipe/modules/queryeditor/io/QueryLoader.java	786	The method createMacroArc() has an NPath complexity of 40960
12156	src/pipe/modules/queryeditor/io/QueryLoader.java	788	Found 'DD'-anomaly for variable 'arcID' (lines '905'-'919').
12157	src/pipe/modules/queryeditor/io/QueryLoader.java	789	Found 'DD'-anomaly for variable 'arcLabel' (lines '906'-'922').
12158	src/pipe/modules/queryeditor/io/QueryLoader.java	790	Found 'DD'-anomaly for variable 'arcSourceID' (lines '907'-'925').
12159	src/pipe/modules/queryeditor/io/QueryLoader.java	791	Found 'DD'-anomaly for variable 'arcTargetID' (lines '908'-'928').
12160	src/pipe/modules/queryeditor/io/QueryLoader.java	792	Found 'DD'-anomaly for variable 'arcStartX' (lines '909'-'939').
12161	src/pipe/modules/queryeditor/io/QueryLoader.java	793	Found 'DD'-anomaly for variable 'arcStartY' (lines '910'-'942').
12162	src/pipe/modules/queryeditor/io/QueryLoader.java	794	Found 'DD'-anomaly for variable 'arcEndX' (lines '911'-'945').
12163	src/pipe/modules/queryeditor/io/QueryLoader.java	795	Found 'DD'-anomaly for variable 'arcEndY' (lines '912'-'948').
12164	src/pipe/modules/queryeditor/io/QueryLoader.java	796	Found 'DD'-anomaly for variable 'arcRequired' (lines '913'-'933').
12165	src/pipe/modules/queryeditor/io/QueryLoader.java	797	Found 'DD'-anomaly for variable 'labelRequired' (lines '914'-'952').
12166	src/pipe/modules/queryeditor/io/QueryLoader.java	850	Found 'DD'-anomaly for variable 'arcPathPointX' (lines '967'-'994').
12167	src/pipe/modules/queryeditor/io/QueryLoader.java	850	Found 'DU'-anomaly for variable 'arcPathPointX' (lines '967'-'1,013').
12168	src/pipe/modules/queryeditor/io/QueryLoader.java	851	Found 'DD'-anomaly for variable 'arcPathPointY' (lines '968'-'1,000').
12169	src/pipe/modules/queryeditor/io/QueryLoader.java	851	Found 'DU'-anomaly for variable 'arcPathPointY' (lines '968'-'1,013').
12170	src/pipe/modules/queryeditor/io/QueryLoader.java	852	Found 'DD'-anomaly for variable 'arcPathPointType' (lines '969'-'987').
12171	src/pipe/modules/queryeditor/io/QueryLoader.java	852	Found 'DD'-anomaly for variable 'arcPathPointType' (lines '969'-'989').
12172	src/pipe/modules/queryeditor/io/QueryLoader.java	852	Found 'DU'-anomaly for variable 'arcPathPointType' (lines '969'-'1,013').
12173	src/pipe/modules/queryeditor/io/QueryTransformer.java	32	Avoid unnecessary constructors - the compiler will generate these for you
12174	src/pipe/modules/queryeditor/io/QueryTransformer.java	32	Document empty constructor
12175	src/pipe/modules/queryeditor/io/QueryTransformer.java	47	Parameter 'filename' is not assigned and could be declared final
12176	src/pipe/modules/queryeditor/io/QueryTransformer.java	48	Avoid excessively long variable names like outputObjectArrayList
12177	src/pipe/modules/queryeditor/io/QueryTransformer.java	48	Found 'DD'-anomaly for variable 'outputObjectArrayList' (lines '48'-'63').
12178	src/pipe/modules/queryeditor/io/QueryTransformer.java	49	Found 'DD'-anomaly for variable 'document' (lines '49'-'68').
12179	src/pipe/modules/queryeditor/io/QueryTransformer.java	53	Local variable 'xsltSource' could be declared final
12180	src/pipe/modules/queryeditor/io/QueryTransformer.java	54	The String literal "file.separator" appears 5 times in this file; the first occurrence is on line 54
12181	src/pipe/modules/queryeditor/io/QueryTransformer.java	59	Avoid using if statements without curly braces
12182	src/pipe/modules/queryeditor/io/QueryTransformer.java	60	System.out.print is used
12183	src/pipe/modules/queryeditor/io/QueryTransformer.java	62	Local variable 'transformer' could be declared final
12184	src/pipe/modules/queryeditor/io/QueryTransformer.java	65	Local variable 'source' could be declared final
12185	src/pipe/modules/queryeditor/io/QueryTransformer.java	66	Local variable 'result' could be declared final
12186	src/pipe/modules/queryeditor/io/QueryTransformer.java	70	System.out.print is used
12187	src/pipe/modules/queryeditor/io/QueryTransformer.java	73	System.out.print is used
12188	src/pipe/modules/queryeditor/io/QueryTransformer.java	76	System.out.print is used
12189	src/pipe/modules/queryeditor/io/QueryTransformer.java	79	System.out.print is used
12190	src/pipe/modules/queryeditor/io/QueryTransformer.java	83	Avoid using if statements without curly braces
12191	src/pipe/modules/queryeditor/io/QueryTransformer.java	99	Parameter 'ptmlFileName' is not assigned and could be declared final
12192	src/pipe/modules/queryeditor/io/QueryTransformer.java	100	Found 'DD'-anomaly for variable 'document' (lines '100'-'106').
12193	src/pipe/modules/queryeditor/io/QueryTransformer.java	103	Avoid excessively long variable names like documentBuilderFactory
12194	src/pipe/modules/queryeditor/io/QueryTransformer.java	103	Local variable 'documentBuilderFactory' could be declared final
12195	src/pipe/modules/queryeditor/io/QueryTransformer.java	128	Parameter 'ptmlFile' is not assigned and could be declared final
12196	src/pipe/modules/queryeditor/io/QueryTransformer.java	129	Found 'DD'-anomaly for variable 'document' (lines '129'-'135').
12197	src/pipe/modules/queryeditor/io/QueryTransformer.java	132	Avoid excessively long variable names like documentBuilderFactory
12198	src/pipe/modules/queryeditor/io/QueryWriter.java	46	The class 'QueryWriter' has a Cyclomatic Complexity of 9 (Highest = 18).
12199	src/pipe/modules/queryeditor/io/QueryWriter.java	47	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
12200	src/pipe/modules/queryeditor/io/QueryWriter.java	51	Avoid using implementation types like 'HashMap'; use the interface instead
12201	src/pipe/modules/queryeditor/io/QueryWriter.java	51	Avoid using implementation types like 'HashMap'; use the interface instead
12202	src/pipe/modules/queryeditor/io/QueryWriter.java	57	Avoid really long methods.
12203	src/pipe/modules/queryeditor/io/QueryWriter.java	57	The method 'saveQuery' has a Cyclomatic Complexity of 11.
12204	src/pipe/modules/queryeditor/io/QueryWriter.java	64	Avoid using if statements without curly braces
12205	src/pipe/modules/queryeditor/io/QueryWriter.java	65	Avoid throwing null pointer exceptions.
12206	src/pipe/modules/queryeditor/io/QueryWriter.java	70	Found 'DD'-anomaly for variable 'ptDOM' (lines '70'-'79').
12207	src/pipe/modules/queryeditor/io/QueryWriter.java	71	Found 'DD'-anomaly for variable 'xsltSource' (lines '71'-'124').
12208	src/pipe/modules/queryeditor/io/QueryWriter.java	72	Found 'DD'-anomaly for variable 'transformer' (lines '72'-'135').
12209	src/pipe/modules/queryeditor/io/QueryWriter.java	77	Local variable 'builderFactory' could be declared final
12210	src/pipe/modules/queryeditor/io/QueryWriter.java	78	Local variable 'builder' could be declared final
12211	src/pipe/modules/queryeditor/io/QueryWriter.java	82	Local variable 'ptml' could be declared final
12212	src/pipe/modules/queryeditor/io/QueryWriter.java	88	Local variable 'nodesArray' could be declared final
12213	src/pipe/modules/queryeditor/io/QueryWriter.java	91	Avoid excessively long variable names like nodeNotProcessedYet
12214	src/pipe/modules/queryeditor/io/QueryWriter.java	91	Local variable 'nodeNotProcessedYet' could be declared final
12215	src/pipe/modules/queryeditor/io/QueryWriter.java	93	The String literal "false" appears 5 times in this file; the first occurrence is on line 93
12216	src/pipe/modules/queryeditor/io/QueryWriter.java	101	Avoid excessively long variable names like nodeProcessedAlready
12217	src/pipe/modules/queryeditor/io/QueryWriter.java	101	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '101'-'104').
12218	src/pipe/modules/queryeditor/io/QueryWriter.java	101	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '101'-'108').
12219	src/pipe/modules/queryeditor/io/QueryWriter.java	102	The String literal "true" appears 4 times in this file; the first occurrence is on line 102
12220	src/pipe/modules/queryeditor/io/QueryWriter.java	102	This statement may have some unnecessary parentheses
12221	src/pipe/modules/queryeditor/io/QueryWriter.java	106	This statement may have some unnecessary parentheses
12222	src/pipe/modules/queryeditor/io/QueryWriter.java	111	Avoid using if statements without curly braces
12223	src/pipe/modules/queryeditor/io/QueryWriter.java	127	The String literal "file.separator" appears 4 times in this file; the first occurrence is on line 127
12224	src/pipe/modules/queryeditor/io/QueryWriter.java	138	Avoid excessively long variable names like outputObjectArrayList
12225	src/pipe/modules/queryeditor/io/QueryWriter.java	145	System.out.print is used
12226	src/pipe/modules/queryeditor/io/QueryWriter.java	146	The String literal " : QueryDataWriter Class : modules.queryeditor.io Package" appears 4 times in this file; the first occurrence is on line 146
12227	src/pipe/modules/queryeditor/io/QueryWriter.java	147	The String literal " : filename=\"" appears 4 times in this file; the first occurrence is on line 147
12228	src/pipe/modules/queryeditor/io/QueryWriter.java	153	System.out.print is used
12229	src/pipe/modules/queryeditor/io/QueryWriter.java	160	System.out.print is used
12230	src/pipe/modules/queryeditor/io/QueryWriter.java	168	System.out.print is used
12231	src/pipe/modules/queryeditor/io/QueryWriter.java	180	Avoid really long methods.
12232	src/pipe/modules/queryeditor/io/QueryWriter.java	180	The method 'createNodeElement' has a Cyclomatic Complexity of 18.
12233	src/pipe/modules/queryeditor/io/QueryWriter.java	180	The method createNodeElement() has an NPath complexity of 1062
12234	src/pipe/modules/queryeditor/io/QueryWriter.java	181	Parameter 'macroNode' is not assigned and could be declared final
12235	src/pipe/modules/queryeditor/io/QueryWriter.java	208	Avoid using if...else statements without curly braces
12236	src/pipe/modules/queryeditor/io/QueryWriter.java	214	Avoid if (x != y) ..; else ..;
12237	src/pipe/modules/queryeditor/io/QueryWriter.java	215	Avoid using if...else statements without curly braces
12238	src/pipe/modules/queryeditor/io/QueryWriter.java	216	Avoid using if...else statements without curly braces
12239	src/pipe/modules/queryeditor/io/QueryWriter.java	224	Avoid if (x != y) ..; else ..;
12240	src/pipe/modules/queryeditor/io/QueryWriter.java	225	Avoid using if...else statements without curly braces
12241	src/pipe/modules/queryeditor/io/QueryWriter.java	226	Avoid using if...else statements without curly braces
12242	src/pipe/modules/queryeditor/io/QueryWriter.java	232	Avoid excessively long variable names like outgoingArcsElement
12243	src/pipe/modules/queryeditor/io/QueryWriter.java	234	Avoid excessively long variable names like nodeOutgoingArcIDs
12244	src/pipe/modules/queryeditor/io/QueryWriter.java	235	Avoid variables with short names like i
12245	src/pipe/modules/queryeditor/io/QueryWriter.java	240	Avoid if (x != y) ..; else ..;
12246	src/pipe/modules/queryeditor/io/QueryWriter.java	253	Avoid if (x != y) ..; else ..;
12247	src/pipe/modules/queryeditor/io/QueryWriter.java	260	Avoid if (x != y) ..; else ..;
12248	src/pipe/modules/queryeditor/io/QueryWriter.java	267	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '267'-'269').
12249	src/pipe/modules/queryeditor/io/QueryWriter.java	267	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '267'-'271').
12250	src/pipe/modules/queryeditor/io/QueryWriter.java	268	This statement may have some unnecessary parentheses
12251	src/pipe/modules/queryeditor/io/QueryWriter.java	270	Avoid using if statements without curly braces
12252	src/pipe/modules/queryeditor/io/QueryWriter.java	270	This statement may have some unnecessary parentheses
12253	src/pipe/modules/queryeditor/io/QueryWriter.java	320	Found 'DU'-anomaly for variable 'point' (lines '320'-'325').
12254	src/pipe/modules/queryeditor/io/QueryWriter.java	330	Avoid variables with short names like x
12255	src/pipe/modules/queryeditor/io/QueryWriter.java	331	Avoid variables with short names like y
12256	src/pipe/modules/queryeditor/io/QueryWriter.java	335	Avoid variables with short names like id
12257	src/pipe/modules/queryeditor/io/QueryWriter.java	341	Avoid using if statements without curly braces
12258	src/pipe/modules/queryeditor/io/QueryWriter.java	342	Prefer StringBuffer over += for concatenating strings
12259	src/pipe/modules/queryeditor/io/QueryWriter.java	343	Avoid using if statements without curly braces
12260	src/pipe/modules/queryeditor/io/QueryWriter.java	344	Prefer StringBuffer over += for concatenating strings
12261	src/pipe/modules/queryeditor/io/QueryWriter.java	359	Found 'DU'-anomaly for variable 'retrievedStateLabels' (lines '359'-'424').
12262	src/pipe/modules/queryeditor/io/QueryWriter.java	394	Avoid variables with short names like i
12263	src/pipe/modules/queryeditor/io/QueryWriter.java	432	The method 'serialiseMacros' has a Cyclomatic Complexity of 10.
12264	src/pipe/modules/queryeditor/io/QueryWriter.java	479	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '479'-'481').
12265	src/pipe/modules/queryeditor/io/QueryWriter.java	479	Found 'DD'-anomaly for variable 'nodeProcessedAlready' (lines '479'-'483').
12266	src/pipe/modules/queryeditor/io/QueryWriter.java	480	This statement may have some unnecessary parentheses
12267	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	1	A high number of imports can indicate a high degree of coupling within an object.
12268	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	46	The class 'ReachabilityGraphGenerator' has a Cyclomatic Complexity of 5 (Highest = 10).
12269	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
12270	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	51	Found non-transient, non-static member. Please mark as transient or provide accessors.
12271	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	51	Private field 'guiDialog' could be made final; it is only initialized in the declaration or constructor.
12272	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	55	Parameter 'pnmlData' is not assigned and could be declared final
12273	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	59	Local variable 'contentPane' could be declared final
12274	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	84	Found non-transient, non-static member. Please mark as transient or provide accessors.
12275	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	84	Use explicit scoping instead of the default package private level
12276	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	85	Parameter 'arg0' is not assigned and could be declared final
12277	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	86	Found 'DU'-anomaly for variable 'start' (lines '86'-'149').
12278	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	86	Local variable 'start' could be declared final
12279	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	93	Local variable 'sourceDataLayer' could be declared final
12280	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	97	Found 'DU'-anomaly for variable 'reachabilityGraph' (lines '97'-'149').
12281	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	97	Local variable 'reachabilityGraph' could be declared final
12282	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	100	Avoid variables with short names like s
12283	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	100	Found 'DU'-anomaly for variable 's' (lines '100'-'149').
12284	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	102	A method should have only one exit point, and that should be the last statement in the method
12285	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	102	Avoid using if statements without curly braces
12286	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	103	Avoid if (x != y) ..; else ..;
12287	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	103	Avoid using if...else statements without curly braces
12288	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	103	Prefer StringBuffer over += for concatenating strings
12289	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	108	Do not explicitly trigger a garbage collection.
12290	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	114	Avoid variables with short names like f
12291	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	114	Local variable 'f' could be declared final
12292	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	116	Prefer StringBuffer over += for concatenating strings
12293	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	117	Prefer StringBuffer over += for concatenating strings
12294	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	118	Prefer StringBuffer over += for concatenating strings
12295	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	121	Prefer StringBuffer over += for concatenating strings
12296	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	123	A method should have only one exit point, and that should be the last statement in the method
12297	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	128	A method should have only one exit point, and that should be the last statement in the method
12298	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	132	A method should have only one exit point, and that should be the last statement in the method
12299	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	136	A method should have only one exit point, and that should be the last statement in the method
12300	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	169	Parameter 'rgfile' is not assigned and could be declared final
12301	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	169	The method 'generateDotFile' has a Cyclomatic Complexity of 10.
12302	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	176	System.out.print is used
12303	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	179	System.out.print is used
12304	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	192	Avoid using if statements without curly braces
12305	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	198	Avoid instantiating new objects inside loops
12306	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	199	Avoid instantiating new objects inside loops
12307	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	200	Avoid instantiating new objects inside loops
12308	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	201	Avoid instantiating new objects inside loops
12309	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	207	Avoid if (x != y) ..; else ..;
12310	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	208	Avoid using if...else statements without curly braces
12311	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	210	Avoid using if...else statements without curly braces
12312	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	210	Do not add empty strings
12313	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	223	Avoid instantiating new objects inside loops
12314	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	233	A method/constructor shouldn't explicitly throw java.lang.Exception
12315	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	233	A method/constructor shouldn't explicitly throw java.lang.Exception
12316	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	233	Parameter 'rgfile' is not assigned and could be declared final
12317	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	235	Found 'DD'-anomaly for variable 'graph' (lines '235'-'241').
12318	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	235	Found 'DU'-anomaly for variable 'graph' (lines '235'-'251').
12319	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	237	Avoid if (x != y) ..; else ..;
12320	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	245	This statement may have some unnecessary parentheses
12321	src/pipe/modules/reachability/ReachabilityGraphGenerator.java	250	Avoid using if...else statements without curly braces
12322	src/pipe/modules/rta/AnalyseResponse.java	1	A high number of imports can indicate a high degree of coupling within an object.
12323	src/pipe/modules/rta/AnalyseResponse.java	54	The class 'AnalyseResponse' has a Cyclomatic Complexity of 7 (Highest = 22).
12324	src/pipe/modules/rta/AnalyseResponse.java	54	This class has too many methods, consider refactoring it.
12325	src/pipe/modules/rta/AnalyseResponse.java	54	To be compliant to J2EE, a webapp should not use any thread.
12326	src/pipe/modules/rta/AnalyseResponse.java	54	Too many fields
12327	src/pipe/modules/rta/AnalyseResponse.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
12328	src/pipe/modules/rta/AnalyseResponse.java	59	Private field 'options' could be made final; it is only initialized in the declaration or constructor.
12329	src/pipe/modules/rta/AnalyseResponse.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
12330	src/pipe/modules/rta/AnalyseResponse.java	62	Found non-transient, non-static member. Please mark as transient or provide accessors.
12331	src/pipe/modules/rta/AnalyseResponse.java	62	Private field 'btnBar' could be made final; it is only initialized in the declaration or constructor.
12332	src/pipe/modules/rta/AnalyseResponse.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
12333	src/pipe/modules/rta/AnalyseResponse.java	63	Private field 'feedback' could be made final; it is only initialized in the declaration or constructor.
12334	src/pipe/modules/rta/AnalyseResponse.java	64	Found non-transient, non-static member. Please mark as transient or provide accessors.
12335	src/pipe/modules/rta/AnalyseResponse.java	64	Perhaps 'resText' could be replaced by a local variable.
12336	src/pipe/modules/rta/AnalyseResponse.java	65	Private field 'rta' could be made final; it is only initialized in the declaration or constructor.
12337	src/pipe/modules/rta/AnalyseResponse.java	75	Use explicit scoping instead of the default package private level
12338	src/pipe/modules/rta/AnalyseResponse.java	77	Use explicit scoping instead of the default package private level
12339	src/pipe/modules/rta/AnalyseResponse.java	78	Use explicit scoping instead of the default package private level
12340	src/pipe/modules/rta/AnalyseResponse.java	80	Perhaps 'startExp' could be replaced by a local variable.
12341	src/pipe/modules/rta/AnalyseResponse.java	83	Avoid using implementation types like 'ArrayList'; use the interface instead
12342	src/pipe/modules/rta/AnalyseResponse.java	83	Avoid using implementation types like 'ArrayList'; use the interface instead
12343	src/pipe/modules/rta/AnalyseResponse.java	83	Use explicit scoping instead of the default package private level
12344	src/pipe/modules/rta/AnalyseResponse.java	84	Avoid using implementation types like 'HashMap'; use the interface instead
12345	src/pipe/modules/rta/AnalyseResponse.java	84	Avoid using implementation types like 'HashMap'; use the interface instead
12346	src/pipe/modules/rta/AnalyseResponse.java	84	Use explicit scoping instead of the default package private level
12347	src/pipe/modules/rta/AnalyseResponse.java	94	Parameter 'btnBar' is not assigned and could be declared final
12348	src/pipe/modules/rta/AnalyseResponse.java	94	Parameter 'options' is not assigned and could be declared final
12349	src/pipe/modules/rta/AnalyseResponse.java	94	Parameter 'pnmlData' is not assigned and could be declared final
12350	src/pipe/modules/rta/AnalyseResponse.java	95	Parameter 'results' is not assigned and could be declared final
12351	src/pipe/modules/rta/AnalyseResponse.java	95	Parameter 'rta' is not assigned and could be declared final
12352	src/pipe/modules/rta/AnalyseResponse.java	124	Avoid really long methods.
12353	src/pipe/modules/rta/AnalyseResponse.java	124	The method 'analyse' has a Cyclomatic Complexity of 22.
12354	src/pipe/modules/rta/AnalyseResponse.java	124	The method analyse() has an NCSS line count of 127
12355	src/pipe/modules/rta/AnalyseResponse.java	124	The method analyse() has an NPath complexity of 97280
12356	src/pipe/modules/rta/AnalyseResponse.java	126	Found 'DU'-anomaly for variable 'start' (lines '126'-'351').
12357	src/pipe/modules/rta/AnalyseResponse.java	126	Local variable 'start' could be declared final
12358	src/pipe/modules/rta/AnalyseResponse.java	127	Found 'DU'-anomaly for variable 'finMatrix' (lines '127'-'351').
12359	src/pipe/modules/rta/AnalyseResponse.java	127	Found 'DU'-anomaly for variable 'finRTA' (lines '127'-'351').
12360	src/pipe/modules/rta/AnalyseResponse.java	127	Found 'DU'-anomaly for variable 'finSS' (lines '127'-'351').
12361	src/pipe/modules/rta/AnalyseResponse.java	127	Found 'DU'-anomaly for variable 'startRTA' (lines '127'-'351').
12362	src/pipe/modules/rta/AnalyseResponse.java	128	Found 'DU'-anomaly for variable 'LapGenTime' (lines '128'-'351').
12363	src/pipe/modules/rta/AnalyseResponse.java	135	New exception is thrown in catch block, original stack trace may be lost
12364	src/pipe/modules/rta/AnalyseResponse.java	154	New exception is thrown in catch block, original stack trace may be lost
12365	src/pipe/modules/rta/AnalyseResponse.java	161	New exception is thrown in catch block, original stack trace may be lost
12366	src/pipe/modules/rta/AnalyseResponse.java	169	Avoid variables with short names like sb
12367	src/pipe/modules/rta/AnalyseResponse.java	169	Local variable 'sb' could be declared final
12368	src/pipe/modules/rta/AnalyseResponse.java	174	Local variable 'pipeTmpDir' could be declared final
12369	src/pipe/modules/rta/AnalyseResponse.java	175	Avoid using if statements without curly braces
12370	src/pipe/modules/rta/AnalyseResponse.java	178	Local variable 'reachabilityGraph' could be declared final
12371	src/pipe/modules/rta/AnalyseResponse.java	180	Avoid variables with short names like d
12372	src/pipe/modules/rta/AnalyseResponse.java	180	Local variable 'd' could be declared final
12373	src/pipe/modules/rta/AnalyseResponse.java	193	Avoid printStackTrace(); use a logger call instead.
12374	src/pipe/modules/rta/AnalyseResponse.java	206	New exception is thrown in catch block, original stack trace may be lost
12375	src/pipe/modules/rta/AnalyseResponse.java	210	New exception is thrown in catch block, original stack trace may be lost
12376	src/pipe/modules/rta/AnalyseResponse.java	213	Avoid printStackTrace(); use a logger call instead.
12377	src/pipe/modules/rta/AnalyseResponse.java	217	Prefer StringBuffer over += for concatenating strings
12378	src/pipe/modules/rta/AnalyseResponse.java	218	Prefer StringBuffer over += for concatenating strings
12379	src/pipe/modules/rta/AnalyseResponse.java	235	Prefer StringBuffer over += for concatenating strings
12380	src/pipe/modules/rta/AnalyseResponse.java	264	Avoid unnecessary comparisons in boolean expressions
12381	src/pipe/modules/rta/AnalyseResponse.java	264	Avoid using if statements without curly braces
12382	src/pipe/modules/rta/AnalyseResponse.java	270	Avoid using if...else statements without curly braces
12383	src/pipe/modules/rta/AnalyseResponse.java	272	Avoid using if...else statements without curly braces
12384	src/pipe/modules/rta/AnalyseResponse.java	279	Avoid using if...else statements without curly braces
12385	src/pipe/modules/rta/AnalyseResponse.java	281	Avoid using if...else statements without curly braces
12386	src/pipe/modules/rta/AnalyseResponse.java	296	Prefer StringBuffer over += for concatenating strings
12387	src/pipe/modules/rta/AnalyseResponse.java	320	Avoid printStackTrace(); use a logger call instead.
12388	src/pipe/modules/rta/AnalyseResponse.java	325	Avoid printStackTrace(); use a logger call instead.
12389	src/pipe/modules/rta/AnalyseResponse.java	330	Avoid printStackTrace(); use a logger call instead.
12390	src/pipe/modules/rta/AnalyseResponse.java	338	The String literal " secs" appears 4 times in this file; the first occurrence is on line 338
12391	src/pipe/modules/rta/AnalyseResponse.java	361	The method 'createSparseQTmatrix' has a Cyclomatic Complexity of 11.
12392	src/pipe/modules/rta/AnalyseResponse.java	361	The method createSparseQTmatrix() has an NPath complexity of 292
12393	src/pipe/modules/rta/AnalyseResponse.java	363	Found 'DD'-anomaly for variable 'ipfc' (lines '363'-'367').
12394	src/pipe/modules/rta/AnalyseResponse.java	365	Found 'DD'-anomaly for variable 'inputBuf' (lines '365'-'368').
12395	src/pipe/modules/rta/AnalyseResponse.java	377	Found 'DU'-anomaly for variable 'column' (lines '377'-'450').
12396	src/pipe/modules/rta/AnalyseResponse.java	377	Found 'DU'-anomaly for variable 'dataIndex' (lines '377'-'450').
12397	src/pipe/modules/rta/AnalyseResponse.java	377	Found 'DU'-anomaly for variable 'row' (lines '377'-'450').
12398	src/pipe/modules/rta/AnalyseResponse.java	379	Found 'DU'-anomaly for variable 'currentTrans' (lines '379'-'450').
12399	src/pipe/modules/rta/AnalyseResponse.java	380	Avoid unused local variables such as 'currentState'.
12400	src/pipe/modules/rta/AnalyseResponse.java	380	Found 'DU'-anomaly for variable 'currentState' (lines '380'-'450').
12401	src/pipe/modules/rta/AnalyseResponse.java	388	System.out.print is used
12402	src/pipe/modules/rta/AnalyseResponse.java	415	Avoid instantiating new objects inside loops
12403	src/pipe/modules/rta/AnalyseResponse.java	440	System.arraycopy is more efficient
12404	src/pipe/modules/rta/AnalyseResponse.java	447	System.out.print is used
12405	src/pipe/modules/rta/AnalyseResponse.java	459	Avoid really long methods.
12406	src/pipe/modules/rta/AnalyseResponse.java	459	The method 'createSparseMatrix' has a Cyclomatic Complexity of 15.
12407	src/pipe/modules/rta/AnalyseResponse.java	459	The method createSparseMatrix() has an NPath complexity of 1734
12408	src/pipe/modules/rta/AnalyseResponse.java	463	Found 'DD'-anomaly for variable 'ipfc' (lines '463'-'467').
12409	src/pipe/modules/rta/AnalyseResponse.java	464	Found 'DD'-anomaly for variable 'inputBuf' (lines '464'-'468').
12410	src/pipe/modules/rta/AnalyseResponse.java	477	Found 'DU'-anomaly for variable 'column' (lines '477'-'567').
12411	src/pipe/modules/rta/AnalyseResponse.java	477	Found 'DU'-anomaly for variable 'dataIndex' (lines '477'-'567').
12412	src/pipe/modules/rta/AnalyseResponse.java	477	Found 'DU'-anomaly for variable 'row' (lines '477'-'567').
12413	src/pipe/modules/rta/AnalyseResponse.java	479	Found 'DU'-anomaly for variable 'current' (lines '479'-'567').
12414	src/pipe/modules/rta/AnalyseResponse.java	480	Found 'DU'-anomaly for variable 'currentState' (lines '480'-'567').
12415	src/pipe/modules/rta/AnalyseResponse.java	486	System.out.print is used
12416	src/pipe/modules/rta/AnalyseResponse.java	518	Avoid instantiating new objects inside loops
12417	src/pipe/modules/rta/AnalyseResponse.java	537	Avoid if (x != y) ..; else ..;
12418	src/pipe/modules/rta/AnalyseResponse.java	539	Avoid variables with short names like k
12419	src/pipe/modules/rta/AnalyseResponse.java	557	System.arraycopy is more efficient
12420	src/pipe/modules/rta/AnalyseResponse.java	564	System.out.print is used
12421	src/pipe/modules/rta/AnalyseResponse.java	578	Avoid variables with short names like i
12422	src/pipe/modules/rta/AnalyseResponse.java	595	Avoid unused method parameters such as 'Mdata'.
12423	src/pipe/modules/rta/AnalyseResponse.java	595	Avoid unused method parameters such as 'Mind'.
12424	src/pipe/modules/rta/AnalyseResponse.java	595	Avoid unused private methods such as 'sumCol(int,double,int)'.
12425	src/pipe/modules/rta/AnalyseResponse.java	596	Avoid variables with short names like i
12426	src/pipe/modules/rta/AnalyseResponse.java	610	Avoid unused private methods such as 'printMatrix(int,double)'.
12427	src/pipe/modules/rta/AnalyseResponse.java	611	Avoid unused local variables such as 'kB'.
12428	src/pipe/modules/rta/AnalyseResponse.java	611	Found 'DU'-anomaly for variable 'kB' (lines '611'-'635').
12429	src/pipe/modules/rta/AnalyseResponse.java	613	Avoid unused local variables such as 'k'.
12430	src/pipe/modules/rta/AnalyseResponse.java	613	Found 'DD'-anomaly for variable 'k' (lines '613'-'613').
12431	src/pipe/modules/rta/AnalyseResponse.java	613	Found 'DU'-anomaly for variable 'k' (lines '613'-'635').
12432	src/pipe/modules/rta/AnalyseResponse.java	618	Found 'DD'-anomaly for variable 'printed' (lines '618'-'625').
12433	src/pipe/modules/rta/AnalyseResponse.java	622	Avoid instantiating new objects inside loops
12434	src/pipe/modules/rta/AnalyseResponse.java	624	System.out.print is used
12435	src/pipe/modules/rta/AnalyseResponse.java	630	Avoid unnecessary comparisons in boolean expressions
12436	src/pipe/modules/rta/AnalyseResponse.java	630	Avoid using if statements without curly braces
12437	src/pipe/modules/rta/AnalyseResponse.java	645	The method 'translateExp' has a Cyclomatic Complexity of 10.
12438	src/pipe/modules/rta/AnalyseResponse.java	647	Found 'DU'-anomaly for variable 'outputExp' (lines '647'-'712').
12439	src/pipe/modules/rta/AnalyseResponse.java	649	Found 'DU'-anomaly for variable 'nameToId' (lines '649'-'712').
12440	src/pipe/modules/rta/AnalyseResponse.java	650	Found 'DU'-anomaly for variable 'idToIndex' (lines '650'-'712').
12441	src/pipe/modules/rta/AnalyseResponse.java	663	Found 'DD'-anomaly for variable 'name' (lines '663'-'669').
12442	src/pipe/modules/rta/AnalyseResponse.java	663	Found 'DU'-anomaly for variable 'name' (lines '663'-'712').
12443	src/pipe/modules/rta/AnalyseResponse.java	664	Avoid using if statements without curly braces
12444	src/pipe/modules/rta/AnalyseResponse.java	669	String.indexOf(char) is faster than String.indexOf(String).
12445	src/pipe/modules/rta/AnalyseResponse.java	676	Avoid using if...else statements without curly braces
12446	src/pipe/modules/rta/AnalyseResponse.java	676	The String literal "Expression formatting not valid" appears 4 times in this file; the first occurrence is on line 676
12447	src/pipe/modules/rta/AnalyseResponse.java	692	String.indexOf(char) is faster than String.indexOf(String).
12448	src/pipe/modules/rta/AnalyseResponse.java	726	Found 'DU'-anomaly for variable 'result' (lines '726'-'736').
12449	src/pipe/modules/rta/AnalyseResponse.java	728	Avoid using if statements without curly braces
12450	src/pipe/modules/rta/AnalyseResponse.java	750	Found 'DD'-anomaly for variable 'rgfc' (lines '750'-'753').
12451	src/pipe/modules/rta/AnalyseResponse.java	751	Found 'DD'-anomaly for variable 'rgBuf' (lines '751'-'754').
12452	src/pipe/modules/rta/AnalyseResponse.java	769	Found 'DU'-anomaly for variable 'stateSize' (lines '769'-'803').
12453	src/pipe/modules/rta/AnalyseResponse.java	770	Found 'DU'-anomaly for variable 'mk' (lines '770'-'803').
12454	src/pipe/modules/rta/AnalyseResponse.java	791	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
12455	src/pipe/modules/rta/AnalyseResponse.java	794	Substitute calls to size() == 0 (or size() != 0) with calls to isEmpty()
12456	src/pipe/modules/rta/AnalyseResponse.java	810	Avoid using implementation types like 'ArrayList'; use the interface instead
12457	src/pipe/modules/rta/AnalyseResponse.java	810	Avoid using implementation types like 'ArrayList'; use the interface instead
12458	src/pipe/modules/rta/AnalyseResponse.java	810	Avoid using implementation types like 'ArrayList'; use the interface instead
12459	src/pipe/modules/rta/AnalyseResponse.java	810	Avoid using implementation types like 'ArrayList'; use the interface instead
12460	src/pipe/modules/rta/AnalyseResponse.java	833	Found 'DU'-anomaly for variable 'offset' (lines '833'-'856').
12461	src/pipe/modules/rta/AnalyseResponse.java	868	The method createSparsePTMatrix() has an NPath complexity of 868
12462	src/pipe/modules/rta/AnalyseResponse.java	870	Found 'DD'-anomaly for variable 'ipfc' (lines '870'-'874').
12463	src/pipe/modules/rta/AnalyseResponse.java	872	Found 'DD'-anomaly for variable 'inputBuf' (lines '872'-'875').
12464	src/pipe/modules/rta/AnalyseResponse.java	881	Found 'DU'-anomaly for variable 'column' (lines '881'-'966').
12465	src/pipe/modules/rta/AnalyseResponse.java	881	Found 'DU'-anomaly for variable 'dataIndex' (lines '881'-'966').
12466	src/pipe/modules/rta/AnalyseResponse.java	881	Found 'DU'-anomaly for variable 'row' (lines '881'-'966').
12467	src/pipe/modules/rta/AnalyseResponse.java	883	Found 'DU'-anomaly for variable 'currentTrans' (lines '883'-'966').
12468	src/pipe/modules/rta/AnalyseResponse.java	884	Avoid unused local variables such as 'currentState'.
12469	src/pipe/modules/rta/AnalyseResponse.java	884	Found 'DU'-anomaly for variable 'currentState' (lines '884'-'966').
12470	src/pipe/modules/rta/AnalyseResponse.java	919	Avoid instantiating new objects inside loops
12471	src/pipe/modules/rta/AnalyseResponse.java	957	System.arraycopy is more efficient
12472	src/pipe/modules/rta/RTA.java	44	The class 'RTA' has a Cyclomatic Complexity of 2 (Highest = 10).
12473	src/pipe/modules/rta/RTA.java	44	This class has too many methods, consider refactoring it.
12474	src/pipe/modules/rta/RTA.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
12475	src/pipe/modules/rta/RTA.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
12476	src/pipe/modules/rta/RTA.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
12477	src/pipe/modules/rta/RTA.java	49	Found non-transient, non-static member. Please mark as transient or provide accessors.
12478	src/pipe/modules/rta/RTA.java	50	Found non-transient, non-static member. Please mark as transient or provide accessors.
12479	src/pipe/modules/rta/RTA.java	53	Avoid variables with short names like t
12480	src/pipe/modules/rta/RTA.java	53	To be compliant to J2EE, a webapp should not use any thread.
12481	src/pipe/modules/rta/RTA.java	55	Avoid unnecessary constructors - the compiler will generate these for you
12482	src/pipe/modules/rta/RTA.java	55	Document empty constructor
12483	src/pipe/modules/rta/RTA.java	65	Parameter 'pnmlData' is not assigned and could be declared final
12484	src/pipe/modules/rta/RTA.java	72	Local variable 'contentPane' could be declared final
12485	src/pipe/modules/rta/RTA.java	82	Avoid using if...else statements without curly braces
12486	src/pipe/modules/rta/RTA.java	84	Avoid using if...else statements without curly braces
12487	src/pipe/modules/rta/RTA.java	111	Use explicit scoping instead of the default package private level
12488	src/pipe/modules/rta/RTA.java	112	Parameter 'evnt' is not assigned and could be declared final
12489	src/pipe/modules/rta/RTA.java	115	Local variable 'contentPane' could be declared final
12490	src/pipe/modules/rta/RTA.java	124	To be compliant to J2EE, a webapp should not use any thread.
12491	src/pipe/modules/rta/RTA.java	128	Avoid empty catch blocks
12492	src/pipe/modules/rta/RTA.java	131	Do not explicitly trigger a garbage collection.
12493	src/pipe/modules/rta/RTA.java	138	Use explicit scoping instead of the default package private level
12494	src/pipe/modules/rta/RTA.java	139	Avoid variables with short names like ev
12495	src/pipe/modules/rta/RTA.java	139	Parameter 'ev' is not assigned and could be declared final
12496	src/pipe/modules/rta/RTA.java	148	Use explicit scoping instead of the default package private level
12497	src/pipe/modules/rta/RTA.java	149	Avoid variables with short names like ev
12498	src/pipe/modules/rta/RTA.java	149	Parameter 'ev' is not assigned and could be declared final
12499	src/pipe/modules/rta/RTA.java	152	Local variable 'anBtn' could be declared final
12500	src/pipe/modules/rta/RTA.java	167	Document empty method
12501	src/pipe/modules/rta/RTA.java	167	Parameter 'arg0' is not assigned and could be declared final
12502	src/pipe/modules/rta/RTA.java	168	Document empty method
12503	src/pipe/modules/rta/RTA.java	175	Document empty method
12504	src/pipe/modules/rta/RTA.java	176	Document empty method
12505	src/pipe/modules/rta/RTA.java	177	Document empty method
12506	src/pipe/modules/rta/RTA.java	185	Local variable 'contentPane' could be declared final
12507	src/pipe/modules/rta/RTA.java	208	Local variable 'savedOpt' could be declared final
12508	src/pipe/modules/rta/RTA.java	212	Avoid variables with short names like in
12509	src/pipe/modules/rta/RTA.java	212	Found 'DD'-anomaly for variable 'in' (lines '212'-'214').
12510	src/pipe/modules/rta/RTA.java	217	Avoid printStackTrace(); use a logger call instead.
12511	src/pipe/modules/rta/RTA.java	219	Avoid variables with short names like s
12512	src/pipe/modules/rta/RTA.java	243	Avoid printStackTrace(); use a logger call instead.
12513	src/pipe/modules/rta/RTA.java	263	The method 'saveOptions' has a Cyclomatic Complexity of 10.
12514	src/pipe/modules/rta/RTA.java	266	Found 'DD'-anomaly for variable 'out' (lines '266'-'270').
12515	src/pipe/modules/rta/RTA.java	272	Found 'DD'-anomaly for variable 'TStart' (lines '272'-'275').
12516	src/pipe/modules/rta/RTA.java	278	Found 'DD'-anomaly for variable 'TStop' (lines '278'-'281').
12517	src/pipe/modules/rta/RTA.java	284	Found 'DD'-anomaly for variable 'stepSize' (lines '284'-'287').
12518	src/pipe/modules/rta/RTA.java	290	Found 'DD'-anomaly for variable 'numMaps' (lines '290'-'293').
12519	src/pipe/modules/rta/RTA.java	296	Found 'DD'-anomaly for variable 'bufferSize' (lines '296'-'299').
12520	src/pipe/modules/rta/RTA.java	315	Avoid printStackTrace(); use a logger call instead.
12521	src/pipe/modules/rta/RTA.java	319	Avoid printStackTrace(); use a logger call instead.
12522	src/pipe/modules/rta/RTA.java	322	Avoid printStackTrace(); use a logger call instead.
12523	src/pipe/modules/simulation/Simulation.java	56	The class 'Simulation' has a Cyclomatic Complexity of 6 (Highest = 18).
12524	src/pipe/modules/simulation/Simulation.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
12525	src/pipe/modules/simulation/Simulation.java	60	Found non-transient, non-static member. Please mark as transient or provide accessors.
12526	src/pipe/modules/simulation/Simulation.java	62	Found non-transient, non-static member. Please mark as transient or provide accessors.
12527	src/pipe/modules/simulation/Simulation.java	62	Found non-transient, non-static member. Please mark as transient or provide accessors.
12528	src/pipe/modules/simulation/Simulation.java	64	Parameter 'pnmlData' is not assigned and could be declared final
12529	src/pipe/modules/simulation/Simulation.java	65	Local variable 'guiDialog' could be declared final
12530	src/pipe/modules/simulation/Simulation.java	68	Local variable 'contentPane' could be declared final
12531	src/pipe/modules/simulation/Simulation.java	75	Local variable 'settings' could be declared final
12532	src/pipe/modules/simulation/Simulation.java	110	Avoid excessively long variable names like simulateButtonClick
12533	src/pipe/modules/simulation/Simulation.java	110	Found non-transient, non-static member. Please mark as transient or provide accessors.
12534	src/pipe/modules/simulation/Simulation.java	110	Use explicit scoping instead of the default package private level
12535	src/pipe/modules/simulation/Simulation.java	111	Parameter 'arg0' is not assigned and could be declared final
12536	src/pipe/modules/simulation/Simulation.java	112	Local variable 'sourceDataLayer' could be declared final
12537	src/pipe/modules/simulation/Simulation.java	113	Avoid variables with short names like s
12538	src/pipe/modules/simulation/Simulation.java	113	Found 'DU'-anomaly for variable 's' (lines '113'-'127').
12539	src/pipe/modules/simulation/Simulation.java	114	Avoid using if statements without curly braces
12540	src/pipe/modules/simulation/Simulation.java	115	Avoid if (x != y) ..; else ..;
12541	src/pipe/modules/simulation/Simulation.java	115	Avoid using if...else statements without curly braces
12542	src/pipe/modules/simulation/Simulation.java	115	Prefer StringBuffer over += for concatenating strings
12543	src/pipe/modules/simulation/Simulation.java	118	Local variable 'firings' could be declared final
12544	src/pipe/modules/simulation/Simulation.java	120	Prefer StringBuffer over += for concatenating strings
12545	src/pipe/modules/simulation/Simulation.java	123	Prefer StringBuffer over += for concatenating strings
12546	src/pipe/modules/simulation/Simulation.java	130	Avoid really long methods.
12547	src/pipe/modules/simulation/Simulation.java	130	Parameter 'cycles' is not assigned and could be declared final
12548	src/pipe/modules/simulation/Simulation.java	130	Parameter 'data' is not assigned and could be declared final
12549	src/pipe/modules/simulation/Simulation.java	130	Parameter 'firings' is not assigned and could be declared final
12550	src/pipe/modules/simulation/Simulation.java	130	The method 'simulate' has a Cyclomatic Complexity of 18.
12551	src/pipe/modules/simulation/Simulation.java	130	The method simulate() has an NPath complexity of 4212
12552	src/pipe/modules/simulation/Simulation.java	130	Use explicit scoping instead of the default package private level
12553	src/pipe/modules/simulation/Simulation.java	134	Found 'DD'-anomaly for variable 'averageTokens' (lines '134'-'145').
12554	src/pipe/modules/simulation/Simulation.java	135	Found 'DD'-anomaly for variable 'totalTokens' (lines '135'-'146').
12555	src/pipe/modules/simulation/Simulation.java	136	Found 'DD'-anomaly for variable 'avgResult' (lines '136'-'147').
12556	src/pipe/modules/simulation/Simulation.java	137	Found 'DD'-anomaly for variable 'errorResult' (lines '137'-'148').
12557	src/pipe/modules/simulation/Simulation.java	139	Found 'DD'-anomaly for variable 'overallAverages' (lines '139'-'154').
12558	src/pipe/modules/simulation/Simulation.java	141	Avoid variables with short names like i
12559	src/pipe/modules/simulation/Simulation.java	141	Avoid variables with short names like j
12560	src/pipe/modules/simulation/Simulation.java	145	Found 'DD'-anomaly for variable 'averageTokens' (lines '145'-'145').
12561	src/pipe/modules/simulation/Simulation.java	145	Found 'DD'-anomaly for variable 'averageTokens' (lines '145'-'167').
12562	src/pipe/modules/simulation/Simulation.java	146	Found 'DD'-anomaly for variable 'totalTokens' (lines '146'-'146').
12563	src/pipe/modules/simulation/Simulation.java	146	Found 'DD'-anomaly for variable 'totalTokens' (lines '146'-'168').
12564	src/pipe/modules/simulation/Simulation.java	147	Found 'DD'-anomaly for variable 'avgResult' (lines '147'-'147').
12565	src/pipe/modules/simulation/Simulation.java	147	Found 'DD'-anomaly for variable 'avgResult' (lines '147'-'169').
12566	src/pipe/modules/simulation/Simulation.java	148	Found 'DD'-anomaly for variable 'errorResult' (lines '148'-'148').
12567	src/pipe/modules/simulation/Simulation.java	148	Found 'DD'-anomaly for variable 'errorResult' (lines '148'-'237').
12568	src/pipe/modules/simulation/Simulation.java	148	Found 'DD'-anomaly for variable 'errorResult' (lines '148'-'242').
12569	src/pipe/modules/simulation/Simulation.java	152	Avoid using for statements without curly braces
12570	src/pipe/modules/simulation/Simulation.java	153	Avoid using for statements without curly braces
12571	src/pipe/modules/simulation/Simulation.java	154	Found 'DD'-anomaly for variable 'overallAverages' (lines '154'-'154').
12572	src/pipe/modules/simulation/Simulation.java	154	Found 'DD'-anomaly for variable 'overallAverages' (lines '154'-'212').
12573	src/pipe/modules/simulation/Simulation.java	158	Found 'DD'-anomaly for variable 'transCount' (lines '158'-'200').
12574	src/pipe/modules/simulation/Simulation.java	158	Found 'DU'-anomaly for variable 'transCount' (lines '158'-'265').
12575	src/pipe/modules/simulation/Simulation.java	167	Found 'DD'-anomaly for variable 'averageTokens' (lines '167'-'167').
12576	src/pipe/modules/simulation/Simulation.java	167	Found 'DD'-anomaly for variable 'averageTokens' (lines '167'-'209').
12577	src/pipe/modules/simulation/Simulation.java	168	Found 'DD'-anomaly for variable 'totalTokens' (lines '168'-'168').
12578	src/pipe/modules/simulation/Simulation.java	169	Found 'DD'-anomaly for variable 'avgResult' (lines '169'-'169').
12579	src/pipe/modules/simulation/Simulation.java	169	Found 'DD'-anomaly for variable 'avgResult' (lines '169'-'222').
12580	src/pipe/modules/simulation/Simulation.java	169	Found 'DD'-anomaly for variable 'avgResult' (lines '169'-'223').
12581	src/pipe/modules/simulation/Simulation.java	169	Found 'DU'-anomaly for variable 'avgResult' (lines '169'-'265').
12582	src/pipe/modules/simulation/Simulation.java	180	System.out.print is used
12583	src/pipe/modules/simulation/Simulation.java	200	Found 'DD'-anomaly for variable 'transCount' (lines '200'-'200').
12584	src/pipe/modules/simulation/Simulation.java	200	Found 'DU'-anomaly for variable 'transCount' (lines '200'-'265').
12585	src/pipe/modules/simulation/Simulation.java	212	Found 'DD'-anomaly for variable 'overallAverages' (lines '212'-'212').
12586	src/pipe/modules/simulation/Simulation.java	212	Found 'DU'-anomaly for variable 'overallAverages' (lines '212'-'265').
12587	src/pipe/modules/simulation/Simulation.java	221	Avoid using for statements without curly braces
12588	src/pipe/modules/simulation/Simulation.java	235	Avoid using for statements without curly braces
12589	src/pipe/modules/simulation/Simulation.java	247	Avoid variables with short names like f
12590	src/pipe/modules/simulation/Simulation.java	268	Avoid using if statements without curly braces
12591	src/pipe/modules/simulation/Simulation.java	269	Avoid using for statements without curly braces
12592	src/pipe/modules/stateSpace/StateSpace.java	7	Package name contains upper case characters
12593	src/pipe/modules/stateSpace/StateSpace.java	27	The class 'StateSpace' has a Cyclomatic Complexity of 5 (Highest = 13).
12594	src/pipe/modules/stateSpace/StateSpace.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
12595	src/pipe/modules/stateSpace/StateSpace.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
12596	src/pipe/modules/stateSpace/StateSpace.java	35	Parameter 'pnmlData' is not assigned and could be declared final
12597	src/pipe/modules/stateSpace/StateSpace.java	37	Local variable 'guiDialog' could be declared final
12598	src/pipe/modules/stateSpace/StateSpace.java	40	Local variable 'contentPane' could be declared final
12599	src/pipe/modules/stateSpace/StateSpace.java	72	Avoid excessively long variable names like analyseButtonClick
12600	src/pipe/modules/stateSpace/StateSpace.java	72	Found non-transient, non-static member. Please mark as transient or provide accessors.
12601	src/pipe/modules/stateSpace/StateSpace.java	72	Use explicit scoping instead of the default package private level
12602	src/pipe/modules/stateSpace/StateSpace.java	73	Parameter 'arg0' is not assigned and could be declared final
12603	src/pipe/modules/stateSpace/StateSpace.java	73	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
12604	src/pipe/modules/stateSpace/StateSpace.java	74	Local variable 'sourceDataLayer' could be declared final
12605	src/pipe/modules/stateSpace/StateSpace.java	76	Found 'DU'-anomaly for variable 'markup' (lines '76'-'118').
12606	src/pipe/modules/stateSpace/StateSpace.java	76	Local variable 'markup' could be declared final
12607	src/pipe/modules/stateSpace/StateSpace.java	77	Found 'DU'-anomaly for variable 'forwards' (lines '77'-'118').
12608	src/pipe/modules/stateSpace/StateSpace.java	77	Local variable 'forwards' could be declared final
12609	src/pipe/modules/stateSpace/StateSpace.java	78	Found 'DU'-anomaly for variable 'backwards' (lines '78'-'118').
12610	src/pipe/modules/stateSpace/StateSpace.java	79	Found 'DD'-anomaly for variable 'tree' (lines '79'-'86').
12611	src/pipe/modules/stateSpace/StateSpace.java	79	Found 'DU'-anomaly for variable 'tree' (lines '79'-'118').
12612	src/pipe/modules/stateSpace/StateSpace.java	81	Avoid variables with short names like s
12613	src/pipe/modules/stateSpace/StateSpace.java	82	Avoid using if...else statements without curly braces
12614	src/pipe/modules/stateSpace/StateSpace.java	82	Prefer StringBuffer over += for concatenating strings
12615	src/pipe/modules/stateSpace/StateSpace.java	83	Avoid if (x != y) ..; else ..;
12616	src/pipe/modules/stateSpace/StateSpace.java	85	Avoid using if...else statements without curly braces
12617	src/pipe/modules/stateSpace/StateSpace.java	90	Avoid using if statements without curly braces
12618	src/pipe/modules/stateSpace/StateSpace.java	90	Prefer StringBuffer over += for concatenating strings
12619	src/pipe/modules/stateSpace/StateSpace.java	92	Prefer StringBuffer over += for concatenating strings
12620	src/pipe/modules/stateSpace/StateSpace.java	93	Do not add empty strings
12621	src/pipe/modules/stateSpace/StateSpace.java	94	Do not add empty strings
12622	src/pipe/modules/stateSpace/StateSpace.java	95	Do not add empty strings
12623	src/pipe/modules/stateSpace/StateSpace.java	99	Prefer StringBuffer over += for concatenating strings
12624	src/pipe/modules/stateSpace/StateSpace.java	100	Avoid using if...else statements without curly braces
12625	src/pipe/modules/stateSpace/StateSpace.java	100	Prefer StringBuffer over += for concatenating strings
12626	src/pipe/modules/stateSpace/StateSpace.java	102	Avoid using for statements without curly braces
12627	src/pipe/modules/stateSpace/StateSpace.java	102	Avoid using if...else statements without curly braces
12628	src/pipe/modules/steadyState/Analyse.java	1	Package name contains upper case characters
12629	src/pipe/modules/steadyState/Analyse.java	27	To be compliant to J2EE, a webapp should not use any thread.
12630	src/pipe/modules/steadyState/Analyse.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
12631	src/pipe/modules/steadyState/Analyse.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
12632	src/pipe/modules/steadyState/Analyse.java	31	Avoid excessively long variable names like performanceMeasure
12633	src/pipe/modules/steadyState/Analyse.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
12634	src/pipe/modules/steadyState/Analyse.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
12635	src/pipe/modules/steadyState/Analyse.java	33	Private field 'pnmlData' could be made final; it is only initialized in the declaration or constructor.
12636	src/pipe/modules/steadyState/Analyse.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
12637	src/pipe/modules/steadyState/Analyse.java	34	Use explicit scoping instead of the default package private level
12638	src/pipe/modules/steadyState/Analyse.java	35	Private field 'progressPane' could be made final; it is only initialized in the declaration or constructor.
12639	src/pipe/modules/steadyState/Analyse.java	36	Private field 'resultsPane' could be made final; it is only initialized in the declaration or constructor.
12640	src/pipe/modules/steadyState/Analyse.java	37	Use explicit scoping instead of the default package private level
12641	src/pipe/modules/steadyState/Analyse.java	40	Parameter 'pnmlData' is not assigned and could be declared final
12642	src/pipe/modules/steadyState/Analyse.java	40	Parameter 'progress' is not assigned and could be declared final
12643	src/pipe/modules/steadyState/Analyse.java	40	Parameter 'results' is not assigned and could be declared final
12644	src/pipe/modules/steadyState/Analyse.java	48	Parameter 'serverAddr' is not assigned and could be declared final
12645	src/pipe/modules/steadyState/Analyse.java	48	Parameter 'serverPort' is not assigned and could be declared final
12646	src/pipe/modules/steadyState/Analyse.java	54	Avoid excessively long variable names like performanceMeasure
12647	src/pipe/modules/steadyState/Analyse.java	63	Local variable 'splaces' could be declared final
12648	src/pipe/modules/steadyState/Analyse.java	64	Local variable 'sTransitions' could be declared final
12649	src/pipe/modules/steadyState/Analyse.java	71	Local variable 'serverSock' could be declared final
12650	src/pipe/modules/steadyState/Analyse.java	80	Local variable 'serverListener' could be declared final
12651	src/pipe/modules/steadyState/Analyse.java	84	Local variable 'resultsReceiver' could be declared final
12652	src/pipe/modules/steadyState/FileBrowserPanel.java	1	Package name contains upper case characters
12653	src/pipe/modules/steadyState/FileBrowserPanel.java	14	Parameter 'currNet' is not assigned and could be declared final
12654	src/pipe/modules/steadyState/FileBrowserPanel.java	14	Parameter 'title' is not assigned and could be declared final
12655	src/pipe/modules/steadyState/FileBrowserPanel.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
12656	src/pipe/modules/steadyState/FileBrowserPanel.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
12657	src/pipe/modules/steadyState/FileBrowserPanel.java	18	Use explicit scoping instead of the default package private level
12658	src/pipe/modules/steadyState/FileBrowserPanel.java	20	Parameter 'listName' is not assigned and could be declared final
12659	src/pipe/modules/steadyState/FileBrowserPanel.java	26	Parameter 'listName' is not assigned and could be declared final
12660	src/pipe/modules/steadyState/FileBrowserPanel.java	38	Local variable 'names' could be declared final
12661	src/pipe/modules/steadyState/FileBrowserPanel.java	40	Avoid if (x != y) ..; else ..;
12662	src/pipe/modules/steadyState/FileBrowserPanel.java	41	Avoid using if...else statements without curly braces
12663	src/pipe/modules/steadyState/FileBrowserPanel.java	43	Avoid using if...else statements without curly braces
12664	src/pipe/modules/steadyState/FileBrowserPanel.java	49	Local variable 'names' could be declared final
12665	src/pipe/modules/steadyState/FileBrowserPanel.java	51	Avoid if (x != y) ..; else ..;
12666	src/pipe/modules/steadyState/FileBrowserPanel.java	52	Avoid using if...else statements without curly braces
12667	src/pipe/modules/steadyState/FileBrowserPanel.java	54	Avoid using if...else statements without curly braces
12668	src/pipe/modules/steadyState/FileBrowserPanel.java	60	Avoid variables with short names like i
12669	src/pipe/modules/steadyState/FileBrowserPanel.java	61	Found 'DD'-anomaly for variable 'names' (lines '61'-'68').
12670	src/pipe/modules/steadyState/FileBrowserPanel.java	65	Local variable 'places' could be declared final
12671	src/pipe/modules/steadyState/FileBrowserPanel.java	66	Local variable 'length' could be declared final
12672	src/pipe/modules/steadyState/FileBrowserPanel.java	68	Found 'DD'-anomaly for variable 'names' (lines '68'-'71').
12673	src/pipe/modules/steadyState/FileBrowserPanel.java	70	Avoid using for statements without curly braces
12674	src/pipe/modules/steadyState/FileBrowserPanel.java	71	Found 'DD'-anomaly for variable 'names' (lines '71'-'71').
12675	src/pipe/modules/steadyState/FileBrowserPanel.java	79	Avoid variables with short names like i
12676	src/pipe/modules/steadyState/FileBrowserPanel.java	80	Found 'DD'-anomaly for variable 'names' (lines '80'-'87').
12677	src/pipe/modules/steadyState/FileBrowserPanel.java	84	Local variable 'transitions' could be declared final
12678	src/pipe/modules/steadyState/FileBrowserPanel.java	87	Found 'DD'-anomaly for variable 'names' (lines '87'-'90').
12679	src/pipe/modules/steadyState/FileBrowserPanel.java	89	Avoid using for statements without curly braces
12680	src/pipe/modules/steadyState/FileBrowserPanel.java	90	Found 'DD'-anomaly for variable 'names' (lines '90'-'90').
12681	src/pipe/modules/steadyState/ResultsReceiver.java	1	Package name contains upper case characters
12682	src/pipe/modules/steadyState/ResultsReceiver.java	9	The class 'ResultsReceiver' has a Cyclomatic Complexity of 12 (Highest = 23).
12683	src/pipe/modules/steadyState/ResultsReceiver.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
12684	src/pipe/modules/steadyState/ResultsReceiver.java	11	Private field 'server' could be made final; it is only initialized in the declaration or constructor.
12685	src/pipe/modules/steadyState/ResultsReceiver.java	12	Found non-transient, non-static member. Please mark as transient or provide accessors.
12686	src/pipe/modules/steadyState/ResultsReceiver.java	12	Private field 'resultsPane' could be made final; it is only initialized in the declaration or constructor.
12687	src/pipe/modules/steadyState/ResultsReceiver.java	13	Use explicit scoping instead of the default package private level
12688	src/pipe/modules/steadyState/ResultsReceiver.java	17	Avoid unused constructor parameters such as 'currentStatus'.
12689	src/pipe/modules/steadyState/ResultsReceiver.java	17	Parameter 'currentStatus' is not assigned and could be declared final
12690	src/pipe/modules/steadyState/ResultsReceiver.java	17	Parameter 'resultsPane' is not assigned and could be declared final
12691	src/pipe/modules/steadyState/ResultsReceiver.java	17	Parameter 'server' is not assigned and could be declared final
12692	src/pipe/modules/steadyState/ResultsReceiver.java	23	Avoid really long methods.
12693	src/pipe/modules/steadyState/ResultsReceiver.java	23	Parameter 'pnmlData' is not assigned and could be declared final
12694	src/pipe/modules/steadyState/ResultsReceiver.java	23	The method 'receive' has a Cyclomatic Complexity of 23.
12695	src/pipe/modules/steadyState/ResultsReceiver.java	26	Local variable 'results' could be declared final
12696	src/pipe/modules/steadyState/ResultsReceiver.java	33	Found 'DD'-anomaly for variable 'currentPlace' (lines '33'-'63').
12697	src/pipe/modules/steadyState/ResultsReceiver.java	33	Found 'DU'-anomaly for variable 'currentPlace' (lines '33'-'156').
12698	src/pipe/modules/steadyState/ResultsReceiver.java	34	Found 'DD'-anomaly for variable 'currentTransition' (lines '34'-'70').
12699	src/pipe/modules/steadyState/ResultsReceiver.java	34	Found 'DU'-anomaly for variable 'currentTransition' (lines '34'-'156').
12700	src/pipe/modules/steadyState/ResultsReceiver.java	36	Found 'DD'-anomaly for variable 'lines' (lines '36'-'42').
12701	src/pipe/modules/steadyState/ResultsReceiver.java	36	Found 'DD'-anomaly for variable 'values' (lines '36'-'48').
12702	src/pipe/modules/steadyState/ResultsReceiver.java	55	Prefer StringBuffer over += for concatenating strings
12703	src/pipe/modules/steadyState/ResultsReceiver.java	76	Prefer StringBuffer over += for concatenating strings
12704	src/pipe/modules/steadyState/ResultsReceiver.java	77	Avoid using for statements without curly braces
12705	src/pipe/modules/steadyState/ResultsReceiver.java	78	Prefer StringBuffer over += for concatenating strings
12706	src/pipe/modules/steadyState/ResultsReceiver.java	79	Prefer StringBuffer over += for concatenating strings
12707	src/pipe/modules/steadyState/ResultsReceiver.java	89	Prefer StringBuffer over += for concatenating strings
12708	src/pipe/modules/steadyState/ResultsReceiver.java	94	Avoid using if...else statements without curly braces
12709	src/pipe/modules/steadyState/ResultsReceiver.java	96	Avoid using if...else statements without curly braces
12710	src/pipe/modules/steadyState/ResultsReceiver.java	128	This statement may have some unnecessary parentheses
12711	src/pipe/modules/steadyState/ResultsReceiver.java	150	Found 'DU'-anomaly for variable 'inTable' (lines '150'-'156').
12712	src/pipe/modules/steadyState/StatusListener.java	1	Package name contains upper case characters
12713	src/pipe/modules/steadyState/StatusListener.java	8	The class 'StatusListener' has a Cyclomatic Complexity of 7 (Highest = 12).
12714	src/pipe/modules/steadyState/StatusListener.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
12715	src/pipe/modules/steadyState/StatusListener.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
12716	src/pipe/modules/steadyState/StatusListener.java	12	Found non-transient, non-static member. Please mark as transient or provide accessors.
12717	src/pipe/modules/steadyState/StatusListener.java	12	Use explicit scoping instead of the default package private level
12718	src/pipe/modules/steadyState/StatusListener.java	20	The method 'listen' has a Cyclomatic Complexity of 12.
12719	src/pipe/modules/steadyState/StatusListener.java	22	Found 'DD'-anomaly for variable 'status' (lines '22'-'25').
12720	src/pipe/modules/steadyState/StatusListener.java	23	Found 'DU'-anomaly for variable 'statusCount' (lines '23'-'74').
12721	src/pipe/modules/steadyState/StatusListener.java	29	Position literals first in String comparisons
12722	src/pipe/modules/steadyState/StatusListener.java	29	Position literals first in String comparisons
12723	src/pipe/modules/steadyState/StatusListener.java	36	Found 'DD'-anomaly for variable 'statusCount' (lines '36'-'62').
12724	src/pipe/modules/steadyState/StatusListener.java	39	Avoid using if...else statements without curly braces
12725	src/pipe/modules/steadyState/StatusListener.java	45	Avoid using if...else statements without curly braces
12726	src/pipe/modules/steadyState/StatusListener.java	45	The String literal "<br>" appears 5 times in this file; the first occurrence is on line 45
12727	src/pipe/modules/steadyState/StatusListener.java	48	Avoid using if...else statements without curly braces
12728	src/pipe/modules/steadyState/StatusListener.java	62	Found 'DU'-anomaly for variable 'statusCount' (lines '62'-'74').
12729	src/pipe/modules/steadyState/StatusListener.java	66	Avoid using if...else statements without curly braces
12730	src/pipe/modules/steadyState/StatusListener.java	68	Avoid using if statements without curly braces
12731	src/pipe/modules/steadyState/SteadyState.java	1	Package name contains upper case characters
12732	src/pipe/modules/steadyState/SteadyState.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
12733	src/pipe/modules/steadyState/SteadyState.java	48	Avoid unnecessary constructors - the compiler will generate these for you
12734	src/pipe/modules/steadyState/SteadyState.java	48	Document empty constructor
12735	src/pipe/modules/steadyState/SteadyState.java	57	Found non-transient, non-static member. Please mark as transient or provide accessors.
12736	src/pipe/modules/steadyState/SteadyState.java	57	Perhaps 'guiDialog' could be replaced by a local variable.
12737	src/pipe/modules/steadyState/SteadyState.java	58	Found non-transient, non-static member. Please mark as transient or provide accessors.
12738	src/pipe/modules/steadyState/SteadyState.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
12739	src/pipe/modules/steadyState/SteadyState.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
12740	src/pipe/modules/steadyState/SteadyState.java	69	Use explicit scoping instead of the default package private level
12741	src/pipe/modules/steadyState/SteadyState.java	70	Use explicit scoping instead of the default package private level
12742	src/pipe/modules/steadyState/SteadyState.java	74	Parameter 'pnmlDataIn' is not assigned and could be declared final
12743	src/pipe/modules/steadyState/SteadyState.java	85	Local variable 'contentPane' could be declared final
12744	src/pipe/modules/steadyState/SteadyState.java	89	Local variable 'setupPanel' could be declared final
12745	src/pipe/modules/steadyState/SteadyState.java	122	Avoid excessively long variable names like analyseButtonClick
12746	src/pipe/modules/steadyState/SteadyState.java	122	Use explicit scoping instead of the default package private level
12747	src/pipe/modules/steadyState/SteadyState.java	124	Parameter 'arg0' is not assigned and could be declared final
12748	src/pipe/modules/steadyState/SteadyState.java	130	Found 'DU'-anomaly for variable 'selectedServer' (lines '130'-'181').
12749	src/pipe/modules/steadyState/SteadyState.java	130	Local variable 'selectedServer' could be declared final
12750	src/pipe/modules/steadyState/SteadyState.java	133	Found 'DU'-anomaly for variable 'selectedMeasures' (lines '133'-'181').
12751	src/pipe/modules/steadyState/SteadyState.java	133	Local variable 'selectedMeasures' could be declared final
12752	src/pipe/modules/steadyState/SteadyState.java	142	Avoid using if statements without curly braces
12753	src/pipe/modules/steadyState/SteadyState.java	149	Found 'DU'-anomaly for variable 'statusMesg' (lines '149'-'181').
12754	src/pipe/modules/steadyState/SteadyState.java	153	A method should have only one exit point, and that should be the last statement in the method
12755	src/pipe/modules/steadyState/SteadyState.java	153	Avoid using if...else statements without curly braces
12756	src/pipe/modules/steadyState/SteadyState.java	155	Avoid if (x != y) ..; else ..;
12757	src/pipe/modules/steadyState/SteadyState.java	156	Avoid using if...else statements without curly braces
12758	src/pipe/modules/steadyState/SteadyState.java	156	Prefer StringBuffer over += for concatenating strings
12759	src/pipe/modules/steadyState/SteadyState.java	159	Avoid using if...else statements without curly braces
12760	src/pipe/modules/steadyState/SteadyState.java	159	Prefer StringBuffer over += for concatenating strings
12761	src/pipe/modules/steadyState/SteadyState.java	162	Avoid using if...else statements without curly braces
12762	src/pipe/modules/steadyState/SteadyState.java	162	Prefer StringBuffer over += for concatenating strings
12763	src/pipe/modules/steadyState/SteadyState.java	166	Local variable 'serverInfo' could be declared final
12764	src/pipe/modules/steadyState/SteadyState.java	175	To be compliant to J2EE, a webapp should not use any thread.
12765	src/pipe/modules/steadyState/SteadyState.java	175	To be compliant to J2EE, a webapp should not use any thread.
12766	src/pipe/modules/steadyState/SteadyState.java	195	Avoid excessively long variable names like performanceMeasure
12767	src/pipe/modules/steadyState/SteadyState.java	211	Avoid using if statements without curly braces
12768	src/pipe/modules/steadyState/SteadyState.java	214	Avoid using if statements without curly braces
12769	src/pipe/modules/steadyState/SteadyState.java	217	Avoid using if statements without curly braces
12770	src/pipe/modules/steadyState/SteadyState.java	220	Avoid using if statements without curly braces
12771	src/pipe/modules/steadyState/SteadyState.java	246	This statement may have some unnecessary parentheses
12772	src/pipe/modules/steadyState/SteadyState.java	288	This statement may have some unnecessary parentheses
12773	src/pipe/modules/steadyState/SteadyState.java	318	Use explicit scoping instead of the default package private level
12774	src/pipe/modules/steadyState/SteadyState.java	320	Parameter 'index0' is not assigned and could be declared final
12775	src/pipe/modules/steadyState/SteadyState.java	320	Parameter 'index1' is not assigned and could be declared final
12776	src/pipe/modules/steadyState/SteadyState.java	334	Parameter 'isAdjusting' is not assigned and could be declared final
12777	src/pipe/modules/steadyState/SteadyState.java	336	Avoid unnecessary comparisons in boolean expressions
12778	src/pipe/modules/tagged/Analyse.java	28	To be compliant to J2EE, a webapp should not use any thread.
12779	src/pipe/modules/tagged/Analyse.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
12780	src/pipe/modules/tagged/Analyse.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
12781	src/pipe/modules/tagged/Analyse.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
12782	src/pipe/modules/tagged/Analyse.java	32	Avoid using implementation types like 'ArrayList'; use the interface instead
12783	src/pipe/modules/tagged/Analyse.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
12784	src/pipe/modules/tagged/Analyse.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
12785	src/pipe/modules/tagged/Analyse.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
12786	src/pipe/modules/tagged/Analyse.java	35	Private field 'pnmlData' could be made final; it is only initialized in the declaration or constructor.
12787	src/pipe/modules/tagged/Analyse.java	36	Use explicit scoping instead of the default package private level
12788	src/pipe/modules/tagged/Analyse.java	37	Private field 'progressPane' could be made final; it is only initialized in the declaration or constructor.
12789	src/pipe/modules/tagged/Analyse.java	38	Private field 'resultsPanel' could be made final; it is only initialized in the declaration or constructor.
12790	src/pipe/modules/tagged/Analyse.java	39	Use explicit scoping instead of the default package private level
12791	src/pipe/modules/tagged/Analyse.java	43	Parameter 'pnmlData' is not assigned and could be declared final
12792	src/pipe/modules/tagged/Analyse.java	43	Parameter 'progressPane' is not assigned and could be declared final
12793	src/pipe/modules/tagged/Analyse.java	43	Parameter 'resultsPanel' is not assigned and could be declared final
12794	src/pipe/modules/tagged/Analyse.java	50	Parameter 'serverAddr' is not assigned and could be declared final
12795	src/pipe/modules/tagged/Analyse.java	50	Parameter 'serverPort' is not assigned and could be declared final
12796	src/pipe/modules/tagged/Analyse.java	56	Avoid using implementation types like 'ArrayList'; use the interface instead
12797	src/pipe/modules/tagged/Analyse.java	56	Avoid using implementation types like 'ArrayList'; use the interface instead
12798	src/pipe/modules/tagged/Analyse.java	56	Avoid using implementation types like 'ArrayList'; use the interface instead
12799	src/pipe/modules/tagged/Analyse.java	56	Avoid using implementation types like 'ArrayList'; use the interface instead
12800	src/pipe/modules/tagged/Analyse.java	67	Local variable 'splaces' could be declared final
12801	src/pipe/modules/tagged/Analyse.java	68	Local variable 'sTransitions' could be declared final
12802	src/pipe/modules/tagged/Analyse.java	74	Local variable 'serverSock' could be declared final
12803	src/pipe/modules/tagged/Analyse.java	85	Local variable 'serverListener' could be declared final
12804	src/pipe/modules/tagged/Analyse.java	91	Local variable 'resultsReceiver' could be declared final
12805	src/pipe/modules/tagged/AnalysisSetting.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
12806	src/pipe/modules/tagged/AnalysisSetting.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
12807	src/pipe/modules/tagged/AnalysisSetting.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
12808	src/pipe/modules/tagged/AnalysisSetting.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
12809	src/pipe/modules/tagged/AnalysisSetting.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
12810	src/pipe/modules/tagged/AnalysisSetting.java	19	Parameter 'end' is not assigned and could be declared final
12811	src/pipe/modules/tagged/AnalysisSetting.java	19	Parameter 'method' is not assigned and could be declared final
12812	src/pipe/modules/tagged/AnalysisSetting.java	19	Parameter 'processors' is not assigned and could be declared final
12813	src/pipe/modules/tagged/AnalysisSetting.java	19	Parameter 'start' is not assigned and could be declared final
12814	src/pipe/modules/tagged/AnalysisSetting.java	19	Parameter 'step' is not assigned and could be declared final
12815	src/pipe/modules/tagged/ConditionPlace.java	29	Variables that are final and static should be in all caps.
12816	src/pipe/modules/tagged/ConditionPlace.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
12817	src/pipe/modules/tagged/ConditionPlace.java	36	Private field 'currentMarking' could be made final; it is only initialized in the declaration or constructor.
12818	src/pipe/modules/tagged/ConditionPlace.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
12819	src/pipe/modules/tagged/ConditionPlace.java	39	Private field 'defaultColor' could be made final; it is only initialized in the declaration or constructor.
12820	src/pipe/modules/tagged/ConditionPlace.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
12821	src/pipe/modules/tagged/ConditionPlace.java	40	Private field 'validColor' could be made final; it is only initialized in the declaration or constructor.
12822	src/pipe/modules/tagged/ConditionPlace.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
12823	src/pipe/modules/tagged/ConditionPlace.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
12824	src/pipe/modules/tagged/ConditionPlace.java	49	Parameter 'inputPlace' is not assigned and could be declared final
12825	src/pipe/modules/tagged/ConditionPlace.java	53	Avoid instantiating Integer objects. Call Integer.valueOf() instead.
12826	src/pipe/modules/tagged/ConditionPlace.java	66	Avoid variables with short names like g
12827	src/pipe/modules/tagged/ConditionPlace.java	66	Parameter 'g' is not assigned and could be declared final
12828	src/pipe/modules/tagged/ConditionPlace.java	69	Avoid variables with short names like g2
12829	src/pipe/modules/tagged/ConditionPlace.java	69	Local variable 'g2' could be declared final
12830	src/pipe/modules/tagged/ConditionPlace.java	70	Local variable 'saveXform' could be declared final
12831	src/pipe/modules/tagged/ConditionPlace.java	71	Local variable 'scaledXform' could be declared final
12832	src/pipe/modules/tagged/ConditionPlace.java	72	Local variable 'insets' could be declared final
12833	src/pipe/modules/tagged/ConditionPlace.java	73	Avoid variables with short names like x
12834	src/pipe/modules/tagged/ConditionPlace.java	73	Local variable 'x' could be declared final
12835	src/pipe/modules/tagged/ConditionPlace.java	74	Avoid variables with short names like y
12836	src/pipe/modules/tagged/ConditionPlace.java	86	Avoid using if...else statements without curly braces
12837	src/pipe/modules/tagged/ConditionPlace.java	88	Avoid using if...else statements without curly braces
12838	src/pipe/modules/tagged/ConditionPlace.java	107	A method should have only one exit point, and that should be the last statement in the method
12839	src/pipe/modules/tagged/ConditionPlace.java	107	Avoid using if...else statements without curly braces
12840	src/pipe/modules/tagged/ConditionPlace.java	109	Avoid using if...else statements without curly braces
12841	src/pipe/modules/tagged/ConditionPlace.java	139	Avoid variables with short names like x
12842	src/pipe/modules/tagged/ConditionPlace.java	139	Parameter 'x' is not assigned and could be declared final
12843	src/pipe/modules/tagged/ConditionPlace.java	139	Parameter 'y' is not assigned and could be declared final
12844	src/pipe/modules/tagged/ConditionPlace.java	149	Overriding method merely calls super
12845	src/pipe/modules/tagged/ConditionPlace.java	149	clone() method should throw CloneNotSupportedException
12846	src/pipe/modules/tagged/ConditionPlace.java	153	Avoid reassigning parameters such as 'operator'
12847	src/pipe/modules/tagged/ConditionPlace.java	153	Avoid reassigning parameters such as 'operator'
12848	src/pipe/modules/tagged/ConditionPlace.java	153	Parameter 'operand' is not assigned and could be declared final
12849	src/pipe/modules/tagged/ConditionPlace.java	156	Position literals first in String comparisons
12850	src/pipe/modules/tagged/ConditionPlace.java	157	Avoid using if...else statements without curly braces
12851	src/pipe/modules/tagged/ConditionPlace.java	158	Avoid using if statements without curly braces
12852	src/pipe/modules/tagged/ConditionPlace.java	158	Position literals first in String comparisons
12853	src/pipe/modules/tagged/ConditionPlace.java	178	Document empty method
12854	src/pipe/modules/tagged/ConditionPlaceHandler.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
12855	src/pipe/modules/tagged/ConditionPlaceHandler.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
12856	src/pipe/modules/tagged/ConditionPlaceHandler.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
12857	src/pipe/modules/tagged/ConditionPlaceHandler.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
12858	src/pipe/modules/tagged/ConditionPlaceHandler.java	36	Use explicit scoping instead of the default package private level
12859	src/pipe/modules/tagged/ConditionPlaceHandler.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
12860	src/pipe/modules/tagged/ConditionPlaceHandler.java	37	Use explicit scoping instead of the default package private level
12861	src/pipe/modules/tagged/ConditionPlaceHandler.java	38	Use explicit scoping instead of the default package private level
12862	src/pipe/modules/tagged/ConditionPlaceHandler.java	40	It is a good practice to call super() in a constructor
12863	src/pipe/modules/tagged/ConditionPlaceHandler.java	40	Parameter 'parentDialog' is not assigned and could be declared final
12864	src/pipe/modules/tagged/ConditionPlaceHandler.java	40	Parameter 'place' is not assigned and could be declared final
12865	src/pipe/modules/tagged/ConditionPlaceHandler.java	54	Local variable 'contentPane' could be declared final
12866	src/pipe/modules/tagged/ConditionPlaceHandler.java	60	Local variable 'mainPanel' could be declared final
12867	src/pipe/modules/tagged/ConditionPlaceHandler.java	80	Local variable 'buttonPanel' could be declared final
12868	src/pipe/modules/tagged/ConditionPlaceHandler.java	117	Use explicit scoping instead of the default package private level
12869	src/pipe/modules/tagged/ConditionPlaceHandler.java	117	Variables should start with a lowercase character
12870	src/pipe/modules/tagged/ConditionPlaceHandler.java	119	Parameter 'event' is not assigned and could be declared final
12871	src/pipe/modules/tagged/ConditionPlaceHandler.java	130	Found 'DU'-anomaly for variable 'operatorStr' (lines '130'-'158').
12872	src/pipe/modules/tagged/ConditionPlaceHandler.java	149	System.out.print is used
12873	src/pipe/modules/tagged/ConditionPlaceHandler.java	167	Avoid variables with short names like e
12874	src/pipe/modules/tagged/ConditionPlaceHandler.java	167	Parameter 'e' is not assigned and could be declared final
12875	src/pipe/modules/tagged/ConditionPlaceHandler.java	171	Avoid using if...else statements without curly braces
12876	src/pipe/modules/tagged/ConditionPlaceHandler.java	175	Local variable 'popup' could be declared final
12877	src/pipe/modules/tagged/ConditionPlaceHandler.java	181	Parameter 'inputString' is not assigned and could be declared final
12878	src/pipe/modules/tagged/ConditionPlaceHandler.java	185	Local variable 'checkInput' could be declared final
12879	src/pipe/modules/tagged/ConditionPlaceHandler.java	186	Avoid unnecessary if..then..else statements when returning a boolean
12880	src/pipe/modules/tagged/ConditionPlaceHandler.java	187	A method should have only one exit point, and that should be the last statement in the method
12881	src/pipe/modules/tagged/ConditionPlaceHandler.java	187	Avoid using if...else statements without curly braces
12882	src/pipe/modules/tagged/ConditionPlaceHandler.java	189	A method should have only one exit point, and that should be the last statement in the method
12883	src/pipe/modules/tagged/ConditionPlaceHandler.java	189	Avoid using if...else statements without curly braces
12884	src/pipe/modules/tagged/ConditionPlaceHandler.java	200	Avoid variables with short names like e
12885	src/pipe/modules/tagged/ConditionPlaceHandler.java	208	Avoid variables with short names like e
12886	src/pipe/modules/tagged/PerformanceMeasure.java	9	Avoid using implementation types like 'ArrayList'; use the interface instead
12887	src/pipe/modules/tagged/PerformanceMeasure.java	9	Avoid using implementation types like 'ArrayList'; use the interface instead
12888	src/pipe/modules/tagged/PerformanceMeasure.java	9	Found non-transient, non-static member. Please mark as transient or provide accessors.
12889	src/pipe/modules/tagged/PerformanceMeasure.java	10	Avoid using implementation types like 'ArrayList'; use the interface instead
12890	src/pipe/modules/tagged/PerformanceMeasure.java	10	Avoid using implementation types like 'ArrayList'; use the interface instead
12891	src/pipe/modules/tagged/PerformanceMeasure.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
12892	src/pipe/modules/tagged/PerformanceMeasure.java	11	Avoid using implementation types like 'ArrayList'; use the interface instead
12893	src/pipe/modules/tagged/PerformanceMeasure.java	11	Avoid using implementation types like 'ArrayList'; use the interface instead
12894	src/pipe/modules/tagged/PerformanceMeasure.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
12895	src/pipe/modules/tagged/PerformanceMeasure.java	21	Avoid variables with short names like id
12896	src/pipe/modules/tagged/PerformanceMeasure.java	21	Parameter 'id' is not assigned and could be declared final
12897	src/pipe/modules/tagged/PerformanceMeasure.java	26	Avoid variables with short names like id
12898	src/pipe/modules/tagged/PerformanceMeasure.java	26	Parameter 'id' is not assigned and could be declared final
12899	src/pipe/modules/tagged/PerformanceMeasure.java	31	Parameter 'newEstimator' is not assigned and could be declared final
12900	src/pipe/modules/tagged/ProgressBarHTMLPane.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
12901	src/pipe/modules/tagged/ProgressBarHTMLPane.java	26	Use explicit scoping instead of the default package private level
12902	src/pipe/modules/tagged/ProgressBarHTMLPane.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
12903	src/pipe/modules/tagged/ProgressBarHTMLPane.java	27	Use explicit scoping instead of the default package private level
12904	src/pipe/modules/tagged/ProgressBarHTMLPane.java	29	Parameter 'title' is not assigned and could be declared final
12905	src/pipe/modules/tagged/ProgressBarHTMLPane.java	38	Local variable 'scroller' could be declared final
12906	src/pipe/modules/tagged/ProgressBarHTMLPane.java	51	Parameter 'text' is not assigned and could be declared final
12907	src/pipe/modules/tagged/ProgressBarHTMLPane.java	69	Parameter 'max' is not assigned and could be declared final
12908	src/pipe/modules/tagged/ProgressBarHTMLPane.java	69	Parameter 'min' is not assigned and could be declared final
12909	src/pipe/modules/tagged/ProgressBarHTMLPane.java	76	Parameter 'newValue' is not assigned and could be declared final
12910	src/pipe/modules/tagged/ResultsGraph.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
12911	src/pipe/modules/tagged/ResultsGraph.java	31	Use explicit scoping instead of the default package private level
12912	src/pipe/modules/tagged/ResultsGraph.java	47	Found non-transient, non-static member. Please mark as transient or provide accessors.
12913	src/pipe/modules/tagged/ResultsGraph.java	47	Private field 'saveButtonClick' could be made final; it is only initialized in the declaration or constructor.
12914	src/pipe/modules/tagged/ResultsGraph.java	49	Avoid variables with short names like e
12915	src/pipe/modules/tagged/ResultsGraph.java	49	Parameter 'e' is not assigned and could be declared final
12916	src/pipe/modules/tagged/ResultsGraph.java	51	Found 'DD'-anomaly for variable 'filename' (lines '51'-'52').
12917	src/pipe/modules/tagged/ResultsGraph.java	51	Found 'DD'-anomaly for variable 'filename' (lines '51'-'53').
12918	src/pipe/modules/tagged/ResultsGraph.java	52	Avoid using if statements without curly braces
12919	src/pipe/modules/tagged/ResultsGraph.java	52	Found 'DD'-anomaly for variable 'filename' (lines '52'-'53').
12920	src/pipe/modules/tagged/ResultsGraph.java	54	Avoid using if statements without curly braces
12921	src/pipe/modules/tagged/ResultsGraph.java	56	Avoid variables with short names like b
12922	src/pipe/modules/tagged/ResultsGraph.java	56	Local variable 'b' could be declared final
12923	src/pipe/modules/tagged/ResultsGraph.java	58	Avoid variables with short names like d
12924	src/pipe/modules/tagged/ResultsGraph.java	58	Local variable 'd' could be declared final
12925	src/pipe/modules/tagged/ResultsGraph.java	65	Avoid empty catch blocks
12926	src/pipe/modules/tagged/ResultsGraph.java	70	Use block level rather than method level synchronization
12927	src/pipe/modules/tagged/ResultsReceiver.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
12928	src/pipe/modules/tagged/ResultsReceiver.java	39	Private field 'server' could be made final; it is only initialized in the declaration or constructor.
12929	src/pipe/modules/tagged/ResultsReceiver.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
12930	src/pipe/modules/tagged/ResultsReceiver.java	40	Private field 'resultsPanel' could be made final; it is only initialized in the declaration or constructor.
12931	src/pipe/modules/tagged/ResultsReceiver.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
12932	src/pipe/modules/tagged/ResultsReceiver.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
12933	src/pipe/modules/tagged/ResultsReceiver.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
12934	src/pipe/modules/tagged/ResultsReceiver.java	42	Perhaps 'pdfChartPanel' could be replaced by a local variable.
12935	src/pipe/modules/tagged/ResultsReceiver.java	47	Use explicit scoping instead of the default package private level
12936	src/pipe/modules/tagged/ResultsReceiver.java	50	Use explicit scoping instead of the default package private level
12937	src/pipe/modules/tagged/ResultsReceiver.java	50	Variables should start with a lowercase character
12938	src/pipe/modules/tagged/ResultsReceiver.java	53	Avoid unused constructor parameters such as 'currentStatus'.
12939	src/pipe/modules/tagged/ResultsReceiver.java	53	Parameter 'currentStatus' is not assigned and could be declared final
12940	src/pipe/modules/tagged/ResultsReceiver.java	53	Parameter 'resultsPanel' is not assigned and could be declared final
12941	src/pipe/modules/tagged/ResultsReceiver.java	53	Parameter 'server' is not assigned and could be declared final
12942	src/pipe/modules/tagged/ResultsReceiver.java	59	Avoid really long methods.
12943	src/pipe/modules/tagged/ResultsReceiver.java	61	Local variable 'results' could be declared final
12944	src/pipe/modules/tagged/ResultsReceiver.java	64	Local variable 'points' could be declared final
12945	src/pipe/modules/tagged/ResultsReceiver.java	65	Found 'DU'-anomaly for variable 'CDFpoints' (lines '65'-'166').
12946	src/pipe/modules/tagged/ResultsReceiver.java	65	Local variable 'CDFpoints' could be declared final
12947	src/pipe/modules/tagged/ResultsReceiver.java	66	Found 'DD'-anomaly for variable 'doCDF' (lines '66'-'83').
12948	src/pipe/modules/tagged/ResultsReceiver.java	75	Avoid variables with short names like i
12949	src/pipe/modules/tagged/ResultsReceiver.java	84	Found 'DU'-anomaly for variable 'i' (lines '84'-'166').
12950	src/pipe/modules/tagged/ResultsReceiver.java	89	Avoid instantiating new objects inside loops
12951	src/pipe/modules/tagged/ResultsReceiver.java	89	Avoid instantiating new objects inside loops
12952	src/pipe/modules/tagged/ResultsReceiver.java	98	Avoid instantiating new objects inside loops
12953	src/pipe/modules/tagged/ResultsReceiver.java	98	Avoid instantiating new objects inside loops
12954	src/pipe/modules/tagged/ResultsReceiver.java	121	Avoid using if statements without curly braces
12955	src/pipe/modules/tagged/ResultsReceiver.java	131	Local variable 'buttons' could be declared final
12956	src/pipe/modules/tagged/ResultsReceiver.java	142	Local variable 'saveImageBtn' could be declared final
12957	src/pipe/modules/tagged/ResultsReceiver.java	169	Use explicit scoping instead of the default package private level
12958	src/pipe/modules/tagged/ResultsReceiver.java	171	Parameter 'eve' is not assigned and could be declared final
12959	src/pipe/modules/tagged/ResultsReceiver.java	184	Use bitwise inversion to invert boolean values
12960	src/pipe/modules/tagged/ResultsReceiver.java	190	Use explicit scoping instead of the default package private level
12961	src/pipe/modules/tagged/ResultsReceiver.java	192	Parameter 'eve' is not assigned and could be declared final
12962	src/pipe/modules/tagged/ResultsReceiver.java	197	Avoid using if...else statements without curly braces
12963	src/pipe/modules/tagged/ResultsReceiver.java	197	Found 'DU'-anomaly for variable 'graphImage' (lines '197'-'216').
12964	src/pipe/modules/tagged/ResultsReceiver.java	199	Avoid using if...else statements without curly braces
12965	src/pipe/modules/tagged/ResultsReceiver.java	199	Found 'DU'-anomaly for variable 'graphImage' (lines '199'-'216').
12966	src/pipe/modules/tagged/ResultsReceiver.java	203	Avoid variables with short names like fc
12967	src/pipe/modules/tagged/ResultsReceiver.java	209	Avoid using if...else statements without curly braces
12968	src/pipe/modules/tagged/ResultsReceiver.java	214	Avoid printStackTrace(); use a logger call instead.
12969	src/pipe/modules/tagged/ResultsReceiver.java	221	Private field 'cvsListener' could be made final; it is only initialized in the declaration or constructor.
12970	src/pipe/modules/tagged/ResultsReceiver.java	226	Avoid using if...else statements without curly braces
12971	src/pipe/modules/tagged/ResultsReceiver.java	228	Avoid using if...else statements without curly braces
12972	src/pipe/modules/tagged/ResultsReceiver.java	230	Found 'DU'-anomaly for variable 'size' (lines '230'-'267').
12973	src/pipe/modules/tagged/ResultsReceiver.java	232	Avoid variables with short names like fw
12974	src/pipe/modules/tagged/ResultsReceiver.java	232	Found 'DD'-anomaly for variable 'fw' (lines '232'-'247').
12975	src/pipe/modules/tagged/ResultsReceiver.java	232	Found 'DU'-anomaly for variable 'fw' (lines '232'-'267').
12976	src/pipe/modules/tagged/ResultsReceiver.java	233	Found 'DU'-anomaly for variable 'content' (lines '233'-'267').
12977	src/pipe/modules/tagged/ResultsReceiver.java	237	Avoid variables with short names like fc
12978	src/pipe/modules/tagged/ResultsReceiver.java	250	Avoid printStackTrace(); use a logger call instead.
12979	src/pipe/modules/tagged/ResultsReceiver.java	254	Avoid appending characters as strings in StringBuffer.append.
12980	src/pipe/modules/tagged/ResultsReceiver.java	265	Avoid printStackTrace(); use a logger call instead.
12981	src/pipe/modules/tagged/ServerPanelProcessors.java	24	Found non-transient, non-static member. Please mark as transient or provide accessors.
12982	src/pipe/modules/tagged/ServerPanelProcessors.java	24	Perhaps 'serverPanel' could be replaced by a local variable.
12983	src/pipe/modules/tagged/ServerPanelProcessors.java	24	Private field 'serverPanel' could be made final; it is only initialized in the declaration or constructor.
12984	src/pipe/modules/tagged/ServerPanelProcessors.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
12985	src/pipe/modules/tagged/ServerPanelProcessors.java	25	Private field 'processorNo' could be made final; it is only initialized in the declaration or constructor.
12986	src/pipe/modules/tagged/ServerPanelProcessors.java	27	Parameter 'parent' is not assigned and could be declared final
12987	src/pipe/modules/tagged/ServerPanelProcessors.java	47	Local variable 'value' could be declared final
12988	src/pipe/modules/tagged/SimpleArc.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
12989	src/pipe/modules/tagged/SimpleArc.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
12990	src/pipe/modules/tagged/SimpleArc.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
12991	src/pipe/modules/tagged/SimpleArc.java	19	Parameter 'isTagged' is not assigned and could be declared final
12992	src/pipe/modules/tagged/SimpleArc.java	19	Parameter 'placeId' is not assigned and could be declared final
12993	src/pipe/modules/tagged/SimpleArc.java	19	Parameter 'weight' is not assigned and could be declared final
12994	src/pipe/modules/tagged/SimplePlaces.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
12995	src/pipe/modules/tagged/SimplePlaces.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
12996	src/pipe/modules/tagged/SimplePlaces.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
12997	src/pipe/modules/tagged/SimplePlaces.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
12998	src/pipe/modules/tagged/SimplePlaces.java	24	Parameter 'pnmldata' is not assigned and could be declared final
12999	src/pipe/modules/tagged/SimplePlaces.java	26	Avoid variables with short names like i
13000	src/pipe/modules/tagged/SimplePlaces.java	27	Local variable 'places' could be declared final
13001	src/pipe/modules/tagged/SimpleTransitions.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13002	src/pipe/modules/tagged/SimpleTransitions.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
13003	src/pipe/modules/tagged/SimpleTransitions.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13004	src/pipe/modules/tagged/SimpleTransitions.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13005	src/pipe/modules/tagged/SimpleTransitions.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13006	src/pipe/modules/tagged/SimpleTransitions.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
13007	src/pipe/modules/tagged/SimpleTransitions.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
13008	src/pipe/modules/tagged/SimpleTransitions.java	34	Parameter 'pnmldata' is not assigned and could be declared final
13009	src/pipe/modules/tagged/SimpleTransitions.java	36	Avoid variables with short names like i
13010	src/pipe/modules/tagged/SimpleTransitions.java	62	Avoid instantiating new objects inside loops
13011	src/pipe/modules/tagged/SimpleTransitions.java	63	Avoid instantiating new objects inside loops
13012	src/pipe/modules/tagged/SimpleTransitions.java	72	Local variable 'currentArc' could be declared final
13013	src/pipe/modules/tagged/SimpleTransitions.java	73	Avoid instantiating new objects inside loops
13014	src/pipe/modules/tagged/SimpleTransitions.java	73	Local variable 'newTransArc' could be declared final
13015	src/pipe/modules/tagged/SimpleTransitions.java	80	Local variable 'currentArc' could be declared final
13016	src/pipe/modules/tagged/SimpleTransitions.java	81	Avoid instantiating new objects inside loops
13017	src/pipe/modules/tagged/SimpleTransitions.java	81	Local variable 'newTransArc' could be declared final
13018	src/pipe/modules/tagged/StateEditor.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
13019	src/pipe/modules/tagged/StateEditor.java	41	Use explicit scoping instead of the default package private level
13020	src/pipe/modules/tagged/StateEditor.java	42	Found non-transient, non-static member. Please mark as transient or provide accessors.
13021	src/pipe/modules/tagged/StateEditor.java	42	Use explicit scoping instead of the default package private level
13022	src/pipe/modules/tagged/StateEditor.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
13023	src/pipe/modules/tagged/StateEditor.java	43	Avoid using implementation types like 'ArrayList'; use the interface instead
13024	src/pipe/modules/tagged/StateEditor.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
13025	src/pipe/modules/tagged/StateEditor.java	43	Use explicit scoping instead of the default package private level
13026	src/pipe/modules/tagged/StateEditor.java	44	Found non-transient, non-static member. Please mark as transient or provide accessors.
13027	src/pipe/modules/tagged/StateEditor.java	44	Use explicit scoping instead of the default package private level
13028	src/pipe/modules/tagged/StateEditor.java	48	Found non-transient, non-static member. Please mark as transient or provide accessors.
13029	src/pipe/modules/tagged/StateEditor.java	48	Use explicit scoping instead of the default package private level
13030	src/pipe/modules/tagged/StateEditor.java	52	Avoid excessively long variable names like stateNameTextField
13031	src/pipe/modules/tagged/StateEditor.java	57	Parameter 'pnmlData' is not assigned and could be declared final
13032	src/pipe/modules/tagged/StateEditor.java	65	Parameter 'editStateGroup' is not assigned and could be declared final
13033	src/pipe/modules/tagged/StateEditor.java	65	Parameter 'pnmlData' is not assigned and could be declared final
13034	src/pipe/modules/tagged/StateEditor.java	72	Parameter 'parentRef' is not assigned and could be declared final
13035	src/pipe/modules/tagged/StateEditor.java	84	Local variable 'stateContainer' could be declared final
13036	src/pipe/modules/tagged/StateEditor.java	87	Local variable 'stateViewPanel' could be declared final
13037	src/pipe/modules/tagged/StateEditor.java	90	This statement may have some unnecessary parentheses
13038	src/pipe/modules/tagged/StateEditor.java	95	Local variable 'stateNamePanel' could be declared final
13039	src/pipe/modules/tagged/StateEditor.java	97	Local variable 'stateNameLabel' could be declared final
13040	src/pipe/modules/tagged/StateEditor.java	111	Local variable 'saveButtonPanel' could be declared final
13041	src/pipe/modules/tagged/StateEditor.java	128	This statement may have some unnecessary parentheses
13042	src/pipe/modules/tagged/StateEditor.java	130	Avoid excessively long variable names like viewPanelPreferredWidth
13043	src/pipe/modules/tagged/StateEditor.java	131	Avoid excessively long variable names like viewPanelPreferredHeight
13044	src/pipe/modules/tagged/StateEditor.java	132	Avoid excessively long variable names like viewPanelPreferredSize
13045	src/pipe/modules/tagged/StateEditor.java	139	This statement may have some unnecessary parentheses
13046	src/pipe/modules/tagged/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
13047	src/pipe/modules/tagged/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
13048	src/pipe/modules/tagged/StateEditor.java	171	Avoid reassigning parameters such as 'operator'
13049	src/pipe/modules/tagged/StateEditor.java	171	Parameter 'placeA' is not assigned and could be declared final
13050	src/pipe/modules/tagged/StateEditor.java	174	Position literals first in String comparisons
13051	src/pipe/modules/tagged/StateEditor.java	175	Avoid using if...else statements without curly braces
13052	src/pipe/modules/tagged/StateEditor.java	178	Position literals first in String comparisons
13053	src/pipe/modules/tagged/StateEditor.java	179	Avoid using if...else statements without curly braces
13054	src/pipe/modules/tagged/StateEditor.java	180	Avoid using if statements without curly braces
13055	src/pipe/modules/tagged/StateEditor.java	180	Position literals first in String comparisons
13056	src/pipe/modules/tagged/StateEditor.java	194	Avoid using for statements without curly braces
13057	src/pipe/modules/tagged/StateEditor.java	216	Avoid using if...else statements without curly braces
13058	src/pipe/modules/tagged/StateEditor.java	222	Avoid using if statements without curly braces
13059	src/pipe/modules/tagged/StateEditor.java	230	Avoid using if statements without curly braces
13060	src/pipe/modules/tagged/StateEditor.java	247	Avoid using if...else statements without curly braces
13061	src/pipe/modules/tagged/StateEditor.java	250	Avoid using if...else statements without curly braces
13062	src/pipe/modules/tagged/StateEditor.java	252	Avoid using if statements without curly braces
13063	src/pipe/modules/tagged/StateViewer.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
13064	src/pipe/modules/tagged/StateViewer.java	35	Use explicit scoping instead of the default package private level
13065	src/pipe/modules/tagged/StateViewer.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
13066	src/pipe/modules/tagged/StateViewer.java	36	Use explicit scoping instead of the default package private level
13067	src/pipe/modules/tagged/StateViewer.java	37	Avoid using implementation types like 'ArrayList'; use the interface instead
13068	src/pipe/modules/tagged/StateViewer.java	37	Avoid using implementation types like 'ArrayList'; use the interface instead
13069	src/pipe/modules/tagged/StateViewer.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
13070	src/pipe/modules/tagged/StateViewer.java	37	Use explicit scoping instead of the default package private level
13071	src/pipe/modules/tagged/StateViewer.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
13072	src/pipe/modules/tagged/StateViewer.java	38	Use explicit scoping instead of the default package private level
13073	src/pipe/modules/tagged/StateViewer.java	40	It is a good practice to call super() in a constructor
13074	src/pipe/modules/tagged/StateViewer.java	50	Parameter 'parent' is not assigned and could be declared final
13075	src/pipe/modules/tagged/StateViewer.java	56	Parameter 'pnmldata' is not assigned and could be declared final
13076	src/pipe/modules/tagged/StateViewer.java	56	Parameter 'stateGroupData' is not assigned and could be declared final
13077	src/pipe/modules/tagged/StateViewer.java	66	Local variable 'PNObjects' could be declared final
13078	src/pipe/modules/tagged/StateViewer.java	68	Avoid using while statements without curly braces
13079	src/pipe/modules/tagged/StateViewer.java	74	Parameter 'diffObj' is not assigned and could be declared final
13080	src/pipe/modules/tagged/StateViewer.java	76	Avoid using if statements without curly braces
13081	src/pipe/modules/tagged/StateViewer.java	76	No need to check for null before an instanceof
13082	src/pipe/modules/tagged/StateViewer.java	84	Local variable 'components' could be declared final
13083	src/pipe/modules/tagged/StateViewer.java	85	Avoid variables with short names like d
13084	src/pipe/modules/tagged/StateViewer.java	85	Local variable 'd' could be declared final
13085	src/pipe/modules/tagged/StateViewer.java	86	Avoid variables with short names like x
13086	src/pipe/modules/tagged/StateViewer.java	86	Avoid variables with short names like y
13087	src/pipe/modules/tagged/StateViewer.java	90	Avoid variables with short names like r
13088	src/pipe/modules/tagged/StateViewer.java	90	Local variable 'r' could be declared final
13089	src/pipe/modules/tagged/StateViewer.java	93	Avoid using if statements without curly braces
13090	src/pipe/modules/tagged/StateViewer.java	94	Avoid using if statements without curly braces
13091	src/pipe/modules/tagged/StateViewer.java	100	Parameter 'currentObj' is not assigned and could be declared final
13092	src/pipe/modules/tagged/StateViewer.java	104	Local variable 'place' could be declared final
13093	src/pipe/modules/tagged/StateViewer.java	108	Avoid using if statements without curly braces
13094	src/pipe/modules/tagged/StateViewer.java	125	An empty statement (semicolon) not part of a loop
13095	src/pipe/modules/tagged/StateViewer.java	125	Avoid empty if statements
13096	src/pipe/modules/tagged/StateViewer.java	125	Avoid using if...else statements without curly braces
13097	src/pipe/modules/tagged/StateViewer.java	134	Avoid using if...else statements without curly braces
13098	src/pipe/modules/tagged/StateViewer.java	137	Avoid using if...else statements without curly braces
13099	src/pipe/modules/tagged/StateViewer.java	140	Avoid using if...else statements without curly braces
13100	src/pipe/modules/tagged/StateViewer.java	142	Avoid using if statements without curly braces
13101	src/pipe/modules/tagged/StatusListener.java	7	The class 'StatusListener' has a Cyclomatic Complexity of 6 (Highest = 15).
13102	src/pipe/modules/tagged/StatusListener.java	9	Found non-transient, non-static member. Please mark as transient or provide accessors.
13103	src/pipe/modules/tagged/StatusListener.java	10	Found non-transient, non-static member. Please mark as transient or provide accessors.
13104	src/pipe/modules/tagged/StatusListener.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
13105	src/pipe/modules/tagged/StatusListener.java	11	Use explicit scoping instead of the default package private level
13106	src/pipe/modules/tagged/StatusListener.java	21	The method 'listen' has a Cyclomatic Complexity of 15.
13107	src/pipe/modules/tagged/StatusListener.java	23	Found 'DD'-anomaly for variable 'status' (lines '23'-'28').
13108	src/pipe/modules/tagged/StatusListener.java	25	Found 'DD'-anomaly for variable 'statusCount' (lines '25'-'84').
13109	src/pipe/modules/tagged/StatusListener.java	25	Found 'DU'-anomaly for variable 'statusCount' (lines '25'-'96').
13110	src/pipe/modules/tagged/StatusListener.java	26	Found 'DU'-anomaly for variable 'progressBar' (lines '26'-'96').
13111	src/pipe/modules/tagged/StatusListener.java	32	Position literals first in String comparisons
13112	src/pipe/modules/tagged/StatusListener.java	32	Position literals first in String comparisons
13113	src/pipe/modules/tagged/StatusListener.java	35	Found 'DD'-anomaly for variable 'components' (lines '35'-'35').
13114	src/pipe/modules/tagged/StatusListener.java	35	Found 'DU'-anomaly for variable 'components' (lines '35'-'96').
13115	src/pipe/modules/tagged/StatusListener.java	40	Avoid using if...else statements without curly braces
13116	src/pipe/modules/tagged/StatusListener.java	42	Avoid using if...else statements without curly braces
13117	src/pipe/modules/tagged/StatusListener.java	52	The String literal "<br>" appears 7 times in this file; the first occurrence is on line 52
13118	src/pipe/modules/tagged/StatusListener.java	58	Found 'DU'-anomaly for variable 'progressBar' (lines '58'-'96').
13119	src/pipe/modules/tagged/StatusListener.java	63	Avoid using if statements without curly braces
13120	src/pipe/modules/tagged/StatusListener.java	84	Found 'DD'-anomaly for variable 'statusCount' (lines '84'-'84').
13121	src/pipe/modules/tagged/StatusListener.java	84	Found 'DU'-anomaly for variable 'statusCount' (lines '84'-'96').
13122	src/pipe/modules/tagged/StatusListener.java	88	Avoid using if...else statements without curly braces
13123	src/pipe/modules/tagged/StatusListener.java	90	Avoid using if statements without curly braces
13124	src/pipe/modules/tagged/TaggedModule.java	1	A high number of imports can indicate a high degree of coupling within an object.
13125	src/pipe/modules/tagged/TaggedModule.java	47	The class 'TaggedModule' has a Cyclomatic Complexity of 3 (Highest = 13).
13126	src/pipe/modules/tagged/TaggedModule.java	52	Found non-transient, non-static member. Please mark as transient or provide accessors.
13127	src/pipe/modules/tagged/TaggedModule.java	53	Found non-transient, non-static member. Please mark as transient or provide accessors.
13128	src/pipe/modules/tagged/TaggedModule.java	56	Avoid unnecessary constructors - the compiler will generate these for you
13129	src/pipe/modules/tagged/TaggedModule.java	56	Document empty constructor
13130	src/pipe/modules/tagged/TaggedModule.java	67	Found non-transient, non-static member. Please mark as transient or provide accessors.
13131	src/pipe/modules/tagged/TaggedModule.java	67	Perhaps 'guiDialog' could be replaced by a local variable.
13132	src/pipe/modules/tagged/TaggedModule.java	68	Found non-transient, non-static member. Please mark as transient or provide accessors.
13133	src/pipe/modules/tagged/TaggedModule.java	70	Found non-transient, non-static member. Please mark as transient or provide accessors.
13134	src/pipe/modules/tagged/TaggedModule.java	72	Avoid unused private fields such as 'serverPanel'.
13135	src/pipe/modules/tagged/TaggedModule.java	72	Private field 'serverPanel' could be made final; it is only initialized in the declaration or constructor.
13136	src/pipe/modules/tagged/TaggedModule.java	77	Use explicit scoping instead of the default package private level
13137	src/pipe/modules/tagged/TaggedModule.java	78	Use explicit scoping instead of the default package private level
13138	src/pipe/modules/tagged/TaggedModule.java	81	Use explicit scoping instead of the default package private level
13139	src/pipe/modules/tagged/TaggedModule.java	82	Use explicit scoping instead of the default package private level
13140	src/pipe/modules/tagged/TaggedModule.java	83	Use explicit scoping instead of the default package private level
13141	src/pipe/modules/tagged/TaggedModule.java	85	Parameter 'pnmlDataIn' is not assigned and could be declared final
13142	src/pipe/modules/tagged/TaggedModule.java	97	Local variable 'contentPane' could be declared final
13143	src/pipe/modules/tagged/TaggedModule.java	101	Local variable 'setupPanel' could be declared final
13144	src/pipe/modules/tagged/TaggedModule.java	134	Avoid excessively long variable names like convertButtonClick
13145	src/pipe/modules/tagged/TaggedModule.java	135	Avoid really long methods.
13146	src/pipe/modules/tagged/TaggedModule.java	135	Parameter 'arg0' is not assigned and could be declared final
13147	src/pipe/modules/tagged/TaggedModule.java	141	Found 'DU'-anomaly for variable 'sourceStateGroups' (lines '141'-'239').
13148	src/pipe/modules/tagged/TaggedModule.java	141	Local variable 'sourceStateGroups' could be declared final
13149	src/pipe/modules/tagged/TaggedModule.java	142	Avoid excessively long variable names like destinationStateGroups
13150	src/pipe/modules/tagged/TaggedModule.java	142	Found 'DU'-anomaly for variable 'destinationStateGroups' (lines '142'-'239').
13151	src/pipe/modules/tagged/TaggedModule.java	142	Local variable 'destinationStateGroups' could be declared final
13152	src/pipe/modules/tagged/TaggedModule.java	144	Found 'DU'-anomaly for variable 'analysisSettings' (lines '144'-'239').
13153	src/pipe/modules/tagged/TaggedModule.java	144	Local variable 'analysisSettings' could be declared final
13154	src/pipe/modules/tagged/TaggedModule.java	146	Found 'DU'-anomaly for variable 'sPlaces' (lines '146'-'239').
13155	src/pipe/modules/tagged/TaggedModule.java	147	Found 'DU'-anomaly for variable 'sTransitions' (lines '147'-'239').
13156	src/pipe/modules/tagged/TaggedModule.java	160	Avoid using if statements without curly braces
13157	src/pipe/modules/tagged/TaggedModule.java	167	Found 'DD'-anomaly for variable 'statusMesg' (lines '167'-'227').
13158	src/pipe/modules/tagged/TaggedModule.java	167	Found 'DU'-anomaly for variable 'statusMesg' (lines '167'-'239').
13159	src/pipe/modules/tagged/TaggedModule.java	170	Avoid using if...else statements without curly braces
13160	src/pipe/modules/tagged/TaggedModule.java	172	Avoid if (x != y) ..; else ..;
13161	src/pipe/modules/tagged/TaggedModule.java	173	Avoid using if...else statements without curly braces
13162	src/pipe/modules/tagged/TaggedModule.java	173	Prefer StringBuffer over += for concatenating strings
13163	src/pipe/modules/tagged/TaggedModule.java	201	Avoid unused local variables such as 'translator'.
13164	src/pipe/modules/tagged/TaggedModule.java	201	Found 'DU'-anomaly for variable 'translator' (lines '201'-'239').
13165	src/pipe/modules/tagged/TaggedModule.java	212	System.out.print is used
13166	src/pipe/modules/tagged/TaggedModule.java	214	System.out.print is used
13167	src/pipe/modules/tagged/TaggedModule.java	252	Parameter 'event' is not assigned and could be declared final
13168	src/pipe/modules/tagged/TaggedModule.java	252	The method 'actionPerformed' has a Cyclomatic Complexity of 13.
13169	src/pipe/modules/tagged/TaggedModule.java	267	Found 'DD'-anomaly for variable 'removeList' (lines '267'-'274').
13170	src/pipe/modules/tagged/TaggedModule.java	267	Found 'DD'-anomaly for variable 'removeList' (lines '267'-'279').
13171	src/pipe/modules/tagged/TaggedModule.java	267	Found 'DD'-anomaly for variable 'removeList' (lines '267'-'282').
13172	src/pipe/modules/tagged/TaggedModule.java	267	Found 'DU'-anomaly for variable 'removeList' (lines '267'-'310').
13173	src/pipe/modules/tagged/TaggedModule.java	270	Avoid variables with short names like i
13174	src/pipe/modules/tagged/TaggedModule.java	270	Avoid variables with short names like j
13175	src/pipe/modules/tagged/TaggedModule.java	270	Avoid variables with short names like k
13176	src/pipe/modules/tagged/TaggedModule.java	270	Found 'DD'-anomaly for variable 'i' (lines '270'-'271').
13177	src/pipe/modules/tagged/TaggedModule.java	273	Avoid using while statements without curly braces
13178	src/pipe/modules/tagged/TaggedModule.java	274	Found 'DD'-anomaly for variable 'removeList' (lines '274'-'274').
13179	src/pipe/modules/tagged/TaggedModule.java	274	Found 'DD'-anomaly for variable 'removeList' (lines '274'-'279').
13180	src/pipe/modules/tagged/TaggedModule.java	276	Avoid using if statements without curly braces
13181	src/pipe/modules/tagged/TaggedModule.java	279	Found 'DD'-anomaly for variable 'removeList' (lines '279'-'274').
13182	src/pipe/modules/tagged/TaggedModule.java	279	Found 'DD'-anomaly for variable 'removeList' (lines '279'-'279').
13183	src/pipe/modules/tagged/TaggedModule.java	279	Found 'DD'-anomaly for variable 'removeList' (lines '279'-'282').
13184	src/pipe/modules/tagged/TaggedModule.java	279	Found 'DU'-anomaly for variable 'removeList' (lines '279'-'310').
13185	src/pipe/modules/tagged/TaggedModule.java	281	Avoid using while statements without curly braces
13186	src/pipe/modules/tagged/TaggedModule.java	282	Found 'DD'-anomaly for variable 'removeList' (lines '282'-'282').
13187	src/pipe/modules/tagged/TaggedModule.java	282	Found 'DU'-anomaly for variable 'removeList' (lines '282'-'310').
13188	src/pipe/modules/tagged/TaggedModule.java	286	Avoid using for statements without curly braces
13189	src/pipe/modules/tagged/TaggedModule.java	298	Avoid using if statements without curly braces
13190	src/pipe/modules/tagged/TaggedModule.java	320	This statement may have some unnecessary parentheses
13191	src/pipe/modules/tagged/TaggedModule.java	402	Parameter 'states' is not assigned and could be declared final
13192	src/pipe/modules/tagged/TaggedModule.java	405	Found 'DD'-anomaly for variable 'names' (lines '405'-'408').
13193	src/pipe/modules/tagged/TaggedModule.java	407	Avoid using for statements without curly braces
13194	src/pipe/modules/tagged/TaggedModule.java	408	Found 'DD'-anomaly for variable 'names' (lines '408'-'408').
13195	src/pipe/modules/tagged/TaggedModule.java	430	This statement may have some unnecessary parentheses
13196	src/pipe/modules/tagged/TaggedModule.java	478	Avoid using implementation types like 'ArrayList'; use the interface instead
13197	src/pipe/modules/tagged/TaggedModule.java	478	Avoid using implementation types like 'ArrayList'; use the interface instead
13198	src/pipe/modules/tagged/TaggedModule.java	478	Parameter 'statesList' is not assigned and could be declared final
13199	src/pipe/modules/tagged/TaggedModule.java	489	Avoid using for statements without curly braces
13200	src/pipe/modules/tagged/TaggedModule.java	492	A method should have only one exit point, and that should be the last statement in the method
13201	src/pipe/modules/tagged/TaggedModule.java	496	Avoid using if...else statements without curly braces
13202	src/pipe/modules/tagged/TaggedModule.java	508	Found 'DU'-anomaly for variable 'method' (lines '508'-'530').
13203	src/pipe/modules/tagged/TaggedModule.java	513	Unnecessary wrapper object creation
13204	src/pipe/modules/tagged/TaggedModule.java	514	Unnecessary wrapper object creation
13205	src/pipe/modules/tagged/TaggedModule.java	515	Found 'DU'-anomaly for variable 'stepT' (lines '515'-'530').
13206	src/pipe/modules/tagged/TaggedModule.java	517	Found 'DU'-anomaly for variable 'numProcessors' (lines '517'-'530').
13207	src/pipe/modules/tagged/TaggedModule.java	521	A method should have only one exit point, and that should be the last statement in the method
13208	src/pipe/modules/tagged/TaggedModule.java	521	Avoid using if...else statements without curly braces
13209	src/pipe/modules/tagged/TaggedModule.java	523	A method should have only one exit point, and that should be the last statement in the method
13210	src/pipe/modules/tagged/TaggedModule.java	523	Avoid using if...else statements without curly braces
13211	src/pipe/modules/tagged/TaggedModule.java	556	Avoid unnecessary comparisons in boolean expressions
13212	src/pipe/modules/tagged/TaggedModule.java	556	Avoid using if statements without curly braces
13213	src/pipe/modules/tagged/TransMod.java	23	The class 'TransMod' has a Cyclomatic Complexity of 4 (Highest = 25).
13214	src/pipe/modules/tagged/TransMod.java	24	This class has too many methods, consider refactoring it.
13215	src/pipe/modules/tagged/TransMod.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13216	src/pipe/modules/tagged/TransMod.java	25	Private field 'places' could be made final; it is only initialized in the declaration or constructor.
13217	src/pipe/modules/tagged/TransMod.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13218	src/pipe/modules/tagged/TransMod.java	26	It is somewhat confusing to have a field name with the same name as a method
13219	src/pipe/modules/tagged/TransMod.java	26	Private field 'transitions' could be made final; it is only initialized in the declaration or constructor.
13220	src/pipe/modules/tagged/TransMod.java	27	Avoid excessively long variable names like performanceMeasures
13221	src/pipe/modules/tagged/TransMod.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
13222	src/pipe/modules/tagged/TransMod.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13223	src/pipe/modules/tagged/TransMod.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13224	src/pipe/modules/tagged/TransMod.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13225	src/pipe/modules/tagged/TransMod.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13226	src/pipe/modules/tagged/TransMod.java	31	Private field 'taggedPlaceIndex' could be made final; it is only initialized in the declaration or constructor.
13227	src/pipe/modules/tagged/TransMod.java	35	Private field 'file' could be made final; it is only initialized in the declaration or constructor.
13228	src/pipe/modules/tagged/TransMod.java	36	Private field 'modFile' could be made final; it is only initialized in the declaration or constructor.
13229	src/pipe/modules/tagged/TransMod.java	39	Avoid unused private fields such as 'md'.
13230	src/pipe/modules/tagged/TransMod.java	39	Avoid variables with short names like md
13231	src/pipe/modules/tagged/TransMod.java	41	This final field could be made static
13232	src/pipe/modules/tagged/TransMod.java	41	Use explicit scoping instead of the default package private level
13233	src/pipe/modules/tagged/TransMod.java	42	This final field could be made static
13234	src/pipe/modules/tagged/TransMod.java	42	Use explicit scoping instead of the default package private level
13235	src/pipe/modules/tagged/TransMod.java	43	This final field could be made static
13236	src/pipe/modules/tagged/TransMod.java	43	Use explicit scoping instead of the default package private level
13237	src/pipe/modules/tagged/TransMod.java	56	Avoid excessively long variable names like performanceMeasures
13238	src/pipe/modules/tagged/TransMod.java	56	Avoid unused constructor parameters such as 'clientNo'.
13239	src/pipe/modules/tagged/TransMod.java	56	Parameter 'clientNo' is not assigned and could be declared final
13240	src/pipe/modules/tagged/TransMod.java	56	Parameter 'path' is not assigned and could be declared final
13241	src/pipe/modules/tagged/TransMod.java	56	Parameter 'performanceMeasures' is not assigned and could be declared final
13242	src/pipe/modules/tagged/TransMod.java	56	Parameter 'splaces' is not assigned and could be declared final
13243	src/pipe/modules/tagged/TransMod.java	56	Parameter 'stransitions' is not assigned and could be declared final
13244	src/pipe/modules/tagged/TransMod.java	63	Avoid unnecessary comparisons in boolean expressions
13245	src/pipe/modules/tagged/TransMod.java	63	Avoid using if statements without curly braces
13246	src/pipe/modules/tagged/TransMod.java	76	System.out.print is used
13247	src/pipe/modules/tagged/TransMod.java	77	Avoid printStackTrace(); use a logger call instead.
13248	src/pipe/modules/tagged/TransMod.java	84	Local variable 'modFileWriter' could be declared final
13249	src/pipe/modules/tagged/TransMod.java	86	System.out.print is used
13250	src/pipe/modules/tagged/TransMod.java	91	Overridable method 'computeHash' called during object construction
13251	src/pipe/modules/tagged/TransMod.java	93	Overridable method 'computeHash' called during object construction
13252	src/pipe/modules/tagged/TransMod.java	102	System.out.print is used
13253	src/pipe/modules/tagged/TransMod.java	107	System.out.print is used
13254	src/pipe/modules/tagged/TransMod.java	108	Avoid printStackTrace(); use a logger call instead.
13255	src/pipe/modules/tagged/TransMod.java	126	Avoid excessively long variable names like destinationStateGroups
13256	src/pipe/modules/tagged/TransMod.java	126	Avoid unused constructor parameters such as 'clientNo'.
13257	src/pipe/modules/tagged/TransMod.java	126	Avoid using implementation types like 'ArrayList'; use the interface instead
13258	src/pipe/modules/tagged/TransMod.java	126	Avoid using implementation types like 'ArrayList'; use the interface instead
13259	src/pipe/modules/tagged/TransMod.java	126	Avoid using implementation types like 'ArrayList'; use the interface instead
13260	src/pipe/modules/tagged/TransMod.java	126	Avoid using implementation types like 'ArrayList'; use the interface instead
13261	src/pipe/modules/tagged/TransMod.java	135	Avoid unnecessary comparisons in boolean expressions
13262	src/pipe/modules/tagged/TransMod.java	135	Avoid using if statements without curly braces
13263	src/pipe/modules/tagged/TransMod.java	146	System.out.print is used
13264	src/pipe/modules/tagged/TransMod.java	147	Avoid printStackTrace(); use a logger call instead.
13265	src/pipe/modules/tagged/TransMod.java	154	Local variable 'modFileWriter' could be declared final
13266	src/pipe/modules/tagged/TransMod.java	161	Overridable method 'computeHash' called during object construction
13267	src/pipe/modules/tagged/TransMod.java	176	Avoid printStackTrace(); use a logger call instead.
13268	src/pipe/modules/tagged/TransMod.java	206	The String literal "}\n" appears 17 times in this file; the first occurrence is on line 206
13269	src/pipe/modules/tagged/TransMod.java	216	The String literal " = " appears 4 times in this file; the first occurrence is on line 216
13270	src/pipe/modules/tagged/TransMod.java	229	Found 'DD'-anomaly for variable 'taggedArc' (lines '229'-'239').
13271	src/pipe/modules/tagged/TransMod.java	229	Found 'DD'-anomaly for variable 'taggedArc' (lines '229'-'245').
13272	src/pipe/modules/tagged/TransMod.java	231	Local variable 'arcToTransitions' could be declared final
13273	src/pipe/modules/tagged/TransMod.java	232	Avoid excessively long variable names like arcFromTransitions
13274	src/pipe/modules/tagged/TransMod.java	232	Local variable 'arcFromTransitions' could be declared final
13275	src/pipe/modules/tagged/TransMod.java	239	Found 'DD'-anomaly for variable 'taggedArc' (lines '239'-'245').
13276	src/pipe/modules/tagged/TransMod.java	261	Avoid excessively long variable names like arcFromTransitions
13277	src/pipe/modules/tagged/TransMod.java	261	Avoid really long methods.
13278	src/pipe/modules/tagged/TransMod.java	261	Avoid using implementation types like 'LinkedList'; use the interface instead
13279	src/pipe/modules/tagged/TransMod.java	261	Avoid using implementation types like 'LinkedList'; use the interface instead
13280	src/pipe/modules/tagged/TransMod.java	261	Avoid using implementation types like 'LinkedList'; use the interface instead
13281	src/pipe/modules/tagged/TransMod.java	261	Avoid using implementation types like 'LinkedList'; use the interface instead
13282	src/pipe/modules/tagged/TransMod.java	261	Avoid variables with short names like i
13283	src/pipe/modules/tagged/TransMod.java	261	The method 'writeTransition' has a Cyclomatic Complexity of 25.
13284	src/pipe/modules/tagged/TransMod.java	261	The method writeTransition() has an NPath complexity of 26880
13285	src/pipe/modules/tagged/TransMod.java	263	Found 'DD'-anomaly for variable 'tagInputPlaceIndex' (lines '263'-'273').
13286	src/pipe/modules/tagged/TransMod.java	264	Found 'DD'-anomaly for variable 'tagOutputPlaceIndex' (lines '264'-'279').
13287	src/pipe/modules/tagged/TransMod.java	266	Found 'DD'-anomaly for variable 'tagInputPlace' (lines '266'-'284').
13288	src/pipe/modules/tagged/TransMod.java	267	Avoid unused local variables such as 'tagOutputPlace'.
13289	src/pipe/modules/tagged/TransMod.java	267	Found 'DD'-anomaly for variable 'tagOutputPlace' (lines '267'-'285').
13290	src/pipe/modules/tagged/TransMod.java	284	Found 'DU'-anomaly for variable 'tagInputPlace' (lines '284'-'389').
13291	src/pipe/modules/tagged/TransMod.java	285	Found 'DU'-anomaly for variable 'tagOutputPlace' (lines '285'-'389').
13292	src/pipe/modules/tagged/TransMod.java	361	Avoid using if...else statements without curly braces
13293	src/pipe/modules/tagged/TransMod.java	363	Avoid using if...else statements without curly braces
13294	src/pipe/modules/tagged/TransMod.java	366	Found 'DU'-anomaly for variable 'rate' (lines '366'-'389').
13295	src/pipe/modules/tagged/TransMod.java	366	Local variable 'rate' could be declared final
13296	src/pipe/modules/tagged/TransMod.java	372	Avoid using if...else statements without curly braces
13297	src/pipe/modules/tagged/TransMod.java	376	Avoid using if...else statements without curly braces
13298	src/pipe/modules/tagged/TransMod.java	381	Avoid using if...else statements without curly braces
13299	src/pipe/modules/tagged/TransMod.java	392	Avoid instantiating String objects; this is usually unnecessary.
13300	src/pipe/modules/tagged/TransMod.java	400	Prefer StringBuffer over += for concatenating strings
13301	src/pipe/modules/tagged/TransMod.java	400	The String literal " > " appears 6 times in this file; the first occurrence is on line 400
13302	src/pipe/modules/tagged/TransMod.java	407	Prefer StringBuffer over += for concatenating strings
13303	src/pipe/modules/tagged/TransMod.java	407	The String literal " && " appears 4 times in this file; the first occurrence is on line 407
13304	src/pipe/modules/tagged/TransMod.java	414	Avoid instantiating String objects; this is usually unnecessary.
13305	src/pipe/modules/tagged/TransMod.java	423	Prefer StringBuffer over += for concatenating strings
13306	src/pipe/modules/tagged/TransMod.java	425	Prefer StringBuffer over += for concatenating strings
13307	src/pipe/modules/tagged/TransMod.java	433	Prefer StringBuffer over += for concatenating strings
13308	src/pipe/modules/tagged/TransMod.java	446	Avoid unused private methods such as 'maxStates()'.
13309	src/pipe/modules/tagged/TransMod.java	457	Avoid unused private methods such as 'performance()'.
13310	src/pipe/modules/tagged/TransMod.java	479	Avoid using for statements without curly braces
13311	src/pipe/modules/tagged/TransMod.java	508	Avoid unused private methods such as 'passageTime()'.
13312	src/pipe/modules/tagged/TransMod.java	540	Found 'DU'-anomaly for variable 'groupCount' (lines '540'-'560').
13313	src/pipe/modules/tagged/TransMod.java	547	Avoid using if statements without curly braces
13314	src/pipe/modules/tagged/TransMod.java	553	Avoid using for statements without curly braces
13315	src/pipe/modules/tagged/TransMod.java	558	Found 'DU'-anomaly for variable 'groupCount' (lines '558'-'560').
13316	src/pipe/modules/tagged/TransMod.java	564	Found 'DD'-anomaly for variable 'index' (lines '564'-'572').
13317	src/pipe/server/CommunicationsManager.java	12	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
13318	src/pipe/server/CommunicationsManager.java	24	Parameter 'port' is not assigned and could be declared final
13319	src/pipe/server/CommunicationsManager.java	24	Parameter 'server' is not assigned and could be declared final
13320	src/pipe/server/CommunicationsManager.java	24	Parameter 'source' is not assigned and could be declared final
13321	src/pipe/server/JobStatusChecker.java	27	The class 'JobStatusChecker' has a Cyclomatic Complexity of 4 (Highest = 12).
13322	src/pipe/server/JobStatusChecker.java	27	To be compliant to J2EE, a webapp should not use any thread.
13323	src/pipe/server/JobStatusChecker.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
13324	src/pipe/server/JobStatusChecker.java	30	To be compliant to J2EE, a webapp should not use any thread.
13325	src/pipe/server/JobStatusChecker.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
13326	src/pipe/server/JobStatusChecker.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
13327	src/pipe/server/JobStatusChecker.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
13328	src/pipe/server/JobStatusChecker.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
13329	src/pipe/server/JobStatusChecker.java	45	Avoid unused constructor parameters such as 'workingDirectoryPath'.
13330	src/pipe/server/JobStatusChecker.java	48	Avoid excessively long variable names like workingDirectoryPath
13331	src/pipe/server/JobStatusChecker.java	58	The method 'run' has a Cyclomatic Complexity of 12.
13332	src/pipe/server/JobStatusChecker.java	60	Found 'DD'-anomaly for variable 'count' (lines '60'-'80').
13333	src/pipe/server/JobStatusChecker.java	60	Found 'DU'-anomaly for variable 'count' (lines '60'-'146').
13334	src/pipe/server/JobStatusChecker.java	62	Found 'DD'-anomaly for variable 'logEntryWithDate' (lines '62'-'104').
13335	src/pipe/server/JobStatusChecker.java	62	Found 'DU'-anomaly for variable 'logEntryWithDate' (lines '62'-'146').
13336	src/pipe/server/JobStatusChecker.java	71	Local variable 'statusFile' could be declared final
13337	src/pipe/server/JobStatusChecker.java	72	Avoid using if statements without curly braces
13338	src/pipe/server/JobStatusChecker.java	74	Avoid variables with short names like in
13339	src/pipe/server/JobStatusChecker.java	74	Local variable 'in' could be declared final
13340	src/pipe/server/JobStatusChecker.java	75	Local variable 'bufreader' could be declared final
13341	src/pipe/server/JobStatusChecker.java	80	Found 'DD'-anomaly for variable 'count' (lines '80'-'80').
13342	src/pipe/server/JobStatusChecker.java	80	Found 'DD'-anomaly for variable 'count' (lines '80'-'85').
13343	src/pipe/server/JobStatusChecker.java	80	Found 'DU'-anomaly for variable 'count' (lines '80'-'146').
13344	src/pipe/server/JobStatusChecker.java	105	An operation on an Immutable object (String, BigDecimal or BigInteger) won't change the object itself
13345	src/pipe/server/JobStatusChecker.java	107	Local variable 'indexOfDash' could be declared final
13346	src/pipe/server/JobStatusChecker.java	107	String.indexOf(char) is faster than String.indexOf(String).
13347	src/pipe/server/JobStatusChecker.java	108	Avoid if (x != y) ..; else ..;
13348	src/pipe/server/JobStatusChecker.java	110	Avoid excessively long variable names like startOfActualStatus
13349	src/pipe/server/JobStatusChecker.java	110	Local variable 'startOfActualStatus' could be declared final
13350	src/pipe/server/JobStatusChecker.java	113	Avoid using if...else statements without curly braces
13351	src/pipe/server/JobStatusChecker.java	115	Avoid using if statements without curly braces
13352	src/pipe/server/JobStatusChecker.java	122	Avoid using if statements without curly braces
13353	src/pipe/server/JobStatusChecker.java	161	Avoid instantiating new objects inside loops
13354	src/pipe/server/JobStatusChecker.java	163	Avoid using if...else statements without curly braces
13355	src/pipe/server/JobStatusChecker.java	164	Avoid using if...else statements without curly braces
13356	src/pipe/server/JobStatusChecker.java	194	Avoid printStackTrace(); use a logger call instead.
13357	src/pipe/server/JobStatusChecker.java	202	Avoid using final local variables, turn them into fields
13358	src/pipe/server/JobStatusChecker.java	203	When instantiating a SimpleDateFormat object, specify a Locale
13359	src/pipe/server/JobStatusUpdater.java	31	Found non-transient, non-static member. Please mark as transient or provide accessors.
13360	src/pipe/server/JobStatusUpdater.java	31	Use explicit scoping instead of the default package private level
13361	src/pipe/server/JobStatusUpdater.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
13362	src/pipe/server/JobStatusUpdater.java	32	Use explicit scoping instead of the default package private level
13363	src/pipe/server/JobStatusUpdater.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
13364	src/pipe/server/JobStatusUpdater.java	33	Use explicit scoping instead of the default package private level
13365	src/pipe/server/JobStatusUpdater.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
13366	src/pipe/server/JobStatusUpdater.java	34	Use explicit scoping instead of the default package private level
13367	src/pipe/server/JobStatusUpdater.java	46	Overridable method 'writeToLog' called during object construction
13368	src/pipe/server/JobStatusUpdater.java	57	Found 'DD'-anomaly for variable 'dataOut' (lines '57'-'63').
13369	src/pipe/server/JobStatusUpdater.java	58	Local variable 'sourceFile' could be declared final
13370	src/pipe/server/JobStatusUpdater.java	64	Local variable 'fileInput' could be declared final
13371	src/pipe/server/JobStatusUpdater.java	65	Local variable 'buffer' could be declared final
13372	src/pipe/server/JobStatusUpdater.java	66	Found 'DD'-anomaly for variable 'count' (lines '66'-'66').
13373	src/pipe/server/JobStatusUpdater.java	66	Found 'DU'-anomaly for variable 'count' (lines '66'-'78').
13374	src/pipe/server/JobStatusUpdater.java	85	Local variable 'file' could be declared final
13375	src/pipe/server/JobStatusUpdater.java	91	Avoid printStackTrace(); use a logger call instead.
13376	src/pipe/server/JobStatusUpdater.java	97	Local variable 'cal' could be declared final
13377	src/pipe/server/JobStatusUpdater.java	98	Avoid using final local variables, turn them into fields
13378	src/pipe/server/JobStatusUpdater.java	99	When instantiating a SimpleDateFormat object, specify a Locale
13379	src/pipe/server/ServerDrmaaSession.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
13380	src/pipe/server/ServerDrmaaSession.java	47	Avoid using if...else statements without curly braces
13381	src/pipe/server/ServerDrmaaSession.java	50	Found 'DD'-anomaly for variable 'jobArgs' (lines '50'-'51').
13382	src/pipe/server/ServerDrmaaSession.java	55	Local variable 'jobTempl' could be declared final
13383	src/pipe/server/ServerDrmaaSession.java	65	Local variable 'info' could be declared final
13384	src/pipe/server/ServerDrmaaSession.java	71	The String literal "Job " appears 4 times in this file; the first occurrence is on line 71
13385	src/pipe/server/ServerDrmaaSession.java	82	Avoid using if statements without curly braces
13386	src/pipe/server/ServerDrmaaSession.java	102	Local variable 'errorOut' could be declared final
13387	src/pipe/server/ServerDrmaaSession.java	104	Avoid using if statements without curly braces
13388	src/pipe/server/ServerDrmaaSession.java	110	Avoid empty catch blocks
13389	src/pipe/server/ServerDrmaaSession.java	121	Local variable 'file' could be declared final
13390	src/pipe/server/ServerDrmaaSession.java	128	Avoid printStackTrace(); use a logger call instead.
13391	src/pipe/server/TransMod.java	26	This class has too many methods, consider refactoring it.
13392	src/pipe/server/TransMod.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
13393	src/pipe/server/TransMod.java	27	Private field 'places' could be made final; it is only initialized in the declaration or constructor.
13394	src/pipe/server/TransMod.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13395	src/pipe/server/TransMod.java	28	It is somewhat confusing to have a field name with the same name as a method
13396	src/pipe/server/TransMod.java	28	Private field 'transitions' could be made final; it is only initialized in the declaration or constructor.
13397	src/pipe/server/TransMod.java	29	Avoid excessively long variable names like performanceMeasures
13398	src/pipe/server/TransMod.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
13399	src/pipe/server/TransMod.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13400	src/pipe/server/TransMod.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13401	src/pipe/server/TransMod.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
13402	src/pipe/server/TransMod.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
13403	src/pipe/server/TransMod.java	33	Private field 'modString' could be made final; it is only initialized in the declaration or constructor.
13404	src/pipe/server/TransMod.java	34	Private field 'file' could be made final; it is only initialized in the declaration or constructor.
13405	src/pipe/server/TransMod.java	35	Private field 'modFile' could be made final; it is only initialized in the declaration or constructor.
13406	src/pipe/server/TransMod.java	48	Avoid excessively long variable names like performanceMeasures
13407	src/pipe/server/TransMod.java	48	Parameter 'clientNo' is not assigned and could be declared final
13408	src/pipe/server/TransMod.java	48	Parameter 'path' is not assigned and could be declared final
13409	src/pipe/server/TransMod.java	48	Parameter 'performanceMeasures' is not assigned and could be declared final
13410	src/pipe/server/TransMod.java	48	Parameter 'splaces' is not assigned and could be declared final
13411	src/pipe/server/TransMod.java	48	Parameter 'stransitions' is not assigned and could be declared final
13412	src/pipe/server/TransMod.java	54	Local variable 'filename' could be declared final
13413	src/pipe/server/TransMod.java	62	Local variable 'modFileWriter' could be declared final
13414	src/pipe/server/TransMod.java	64	System.out.print is used
13415	src/pipe/server/TransMod.java	77	System.out.print is used
13416	src/pipe/server/TransMod.java	82	System.out.print is used
13417	src/pipe/server/TransMod.java	83	Avoid printStackTrace(); use a logger call instead.
13418	src/pipe/server/TransMod.java	101	Avoid excessively long variable names like destinationStateGroups
13419	src/pipe/server/TransMod.java	101	Avoid using implementation types like 'ArrayList'; use the interface instead
13420	src/pipe/server/TransMod.java	101	Avoid using implementation types like 'ArrayList'; use the interface instead
13421	src/pipe/server/TransMod.java	101	Avoid using implementation types like 'ArrayList'; use the interface instead
13422	src/pipe/server/TransMod.java	101	Avoid using implementation types like 'ArrayList'; use the interface instead
13423	src/pipe/server/TransMod.java	110	Local variable 'filename' could be declared final
13424	src/pipe/server/TransMod.java	118	Local variable 'modFileWriter' could be declared final
13425	src/pipe/server/TransMod.java	120	System.out.print is used
13426	src/pipe/server/TransMod.java	131	System.out.print is used
13427	src/pipe/server/TransMod.java	137	Avoid printStackTrace(); use a logger call instead.
13428	src/pipe/server/TransMod.java	159	Avoid using for statements without curly braces
13429	src/pipe/server/TransMod.java	162	The String literal "}\n" appears 13 times in this file; the first occurrence is on line 162
13430	src/pipe/server/TransMod.java	171	Avoid using for statements without curly braces
13431	src/pipe/server/TransMod.java	187	Local variable 'arcToTransitions' could be declared final
13432	src/pipe/server/TransMod.java	188	Avoid excessively long variable names like arcFromTransitions
13433	src/pipe/server/TransMod.java	188	Found 'DU'-anomaly for variable 'arcFromTransitions' (lines '188'-'248').
13434	src/pipe/server/TransMod.java	240	Avoid using if...else statements without curly braces
13435	src/pipe/server/TransMod.java	242	Avoid using if...else statements without curly braces
13436	src/pipe/server/TransMod.java	251	Avoid instantiating String objects; this is usually unnecessary.
13437	src/pipe/server/TransMod.java	259	Prefer StringBuffer over += for concatenating strings
13438	src/pipe/server/TransMod.java	266	Prefer StringBuffer over += for concatenating strings
13439	src/pipe/server/TransMod.java	303	Avoid using for statements without curly braces
13440	src/pipe/server/TransMod.java	359	Avoid using implementation types like 'ArrayList'; use the interface instead
13441	src/pipe/server/TransMod.java	359	Avoid using implementation types like 'ArrayList'; use the interface instead
13442	src/pipe/server/TransMod.java	362	Found 'DU'-anomaly for variable 'groupCount' (lines '362'-'382').
13443	src/pipe/server/TransMod.java	369	Avoid using if statements without curly braces
13444	src/pipe/server/TransMod.java	375	Avoid using for statements without curly braces
13445	src/pipe/server/TransMod.java	380	Found 'DU'-anomaly for variable 'groupCount' (lines '380'-'382').
13446	src/pipe/server/performancequery/AnalysisExecutor.java	22	Abstract classes should be named AbstractXXX
13447	src/pipe/server/performancequery/AnalysisExecutor.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13448	src/pipe/server/performancequery/AnalysisExecutor.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13449	src/pipe/server/performancequery/AnalysisExecutor.java	43	Avoid variables with short names like r
13450	src/pipe/server/performancequery/AnalysisExecutor.java	43	Found 'DD'-anomaly for variable 'r' (lines '43'-'47').
13451	src/pipe/server/performancequery/AnalysisExecutor.java	47	Found 'DD'-anomaly for variable 'r' (lines '47'-'47').
13452	src/pipe/server/performancequery/AnalysisExecutor.java	54	Avoid using implementation types like 'ArrayList'; use the interface instead
13453	src/pipe/server/performancequery/AnalysisExecutor.java	54	Avoid using implementation types like 'ArrayList'; use the interface instead
13454	src/pipe/server/performancequery/ClientCommunicator.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
13455	src/pipe/server/performancequery/ClientCommunicator.java	23	Private field 'clientUpdater' could be made final; it is only initialized in the declaration or constructor.
13456	src/pipe/server/performancequery/ClientCommunicator.java	46	Avoid instantiating new objects inside loops
13457	src/pipe/server/performancequery/ClientCommunicator.java	60	To be compliant to J2EE, a webapp should not use any thread.
13458	src/pipe/server/performancequery/ClientCommunicator.java	65	Avoid variables with short names like ln
13459	src/pipe/server/performancequery/ClientUpdater.java	31	To be compliant to J2EE, a webapp should not use any thread.
13460	src/pipe/server/performancequery/ClientUpdater.java	33	Found non-transient, non-static member. Please mark as transient or provide accessors.
13461	src/pipe/server/performancequery/ClientUpdater.java	34	Avoid variables with short names like in
13462	src/pipe/server/performancequery/ClientUpdater.java	34	Found non-transient, non-static member. Please mark as transient or provide accessors.
13463	src/pipe/server/performancequery/ClientUpdater.java	35	Found non-transient, non-static member. Please mark as transient or provide accessors.
13464	src/pipe/server/performancequery/ClientUpdater.java	35	Private field 'server' could be made final; it is only initialized in the declaration or constructor.
13465	src/pipe/server/performancequery/ClientUpdater.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
13466	src/pipe/server/performancequery/ClientUpdater.java	36	Perhaps 'socketConnection' could be replaced by a local variable.
13467	src/pipe/server/performancequery/ClientUpdater.java	37	Found non-transient, non-static member. Please mark as transient or provide accessors.
13468	src/pipe/server/performancequery/ClientUpdater.java	40	Private field 'port' could be made final; it is only initialized in the declaration or constructor.
13469	src/pipe/server/performancequery/ClientUpdater.java	51	Parameter 'clean' is not assigned and could be declared final
13470	src/pipe/server/performancequery/ClientUpdater.java	63	Avoid using if statements without curly braces
13471	src/pipe/server/performancequery/ClientUpdater.java	83	Avoid variables with short names like s
13472	src/pipe/server/performancequery/ClientUpdater.java	88	Avoid assignments in operands
13473	src/pipe/server/performancequery/ClientUpdater.java	106	Avoid empty finally blocks
13474	src/pipe/server/performancequery/ClientUpdater.java	145	Avoid variables with short names like id
13475	src/pipe/server/performancequery/ClientUpdater.java	162	Use block level rather than method level synchronization
13476	src/pipe/server/performancequery/DrmaaExecutor.java	36	The class 'DrmaaExecutor' has a Cyclomatic Complexity of 8 (Highest = 14).
13477	src/pipe/server/performancequery/DrmaaExecutor.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
13478	src/pipe/server/performancequery/DrmaaExecutor.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
13479	src/pipe/server/performancequery/DrmaaExecutor.java	38	Found non-transient, non-static member. Please mark as transient or provide accessors.
13480	src/pipe/server/performancequery/DrmaaExecutor.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
13481	src/pipe/server/performancequery/DrmaaExecutor.java	40	Found non-transient, non-static member. Please mark as transient or provide accessors.
13482	src/pipe/server/performancequery/DrmaaExecutor.java	47	Avoid excessively long variable names like startResultsDirPath
13483	src/pipe/server/performancequery/DrmaaExecutor.java	67	Avoid really long methods.
13484	src/pipe/server/performancequery/DrmaaExecutor.java	67	Avoid using implementation types like 'ArrayList'; use the interface instead
13485	src/pipe/server/performancequery/DrmaaExecutor.java	67	Avoid using implementation types like 'ArrayList'; use the interface instead
13486	src/pipe/server/performancequery/DrmaaExecutor.java	67	The method 'doCall' has a Cyclomatic Complexity of 14.
13487	src/pipe/server/performancequery/DrmaaExecutor.java	76	Avoid variables with short names like r
13488	src/pipe/server/performancequery/DrmaaExecutor.java	76	Found 'DU'-anomaly for variable 'r' (lines '76'-'257').
13489	src/pipe/server/performancequery/DrmaaExecutor.java	77	Found 'DD'-anomaly for variable 'drmSession' (lines '77'-'84').
13490	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'124').
13491	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'136').
13492	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'141').
13493	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'167').
13494	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'192').
13495	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'212').
13496	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DD'-anomaly for variable 'exitInfo' (lines '78'-'92').
13497	src/pipe/server/performancequery/DrmaaExecutor.java	78	Found 'DU'-anomaly for variable 'exitInfo' (lines '78'-'257').
13498	src/pipe/server/performancequery/DrmaaExecutor.java	84	Found 'DU'-anomaly for variable 'drmSession' (lines '84'-'257').
13499	src/pipe/server/performancequery/DrmaaExecutor.java	85	Found 'DU'-anomaly for variable 'pathToModFile' (lines '85'-'257').
13500	src/pipe/server/performancequery/DrmaaExecutor.java	105	Avoid using final local variables, turn them into fields
13501	src/pipe/server/performancequery/DrmaaExecutor.java	151	Avoid variables with short names like p
13502	src/pipe/server/performancequery/DrmaaExecutor.java	174	Avoid variables with short names like p
13503	src/pipe/server/performancequery/DrmaaExecutor.java	216	Avoid using final local variables, turn them into fields
13504	src/pipe/server/performancequery/DrmaaExecutor.java	265	Found 'DU'-anomaly for variable 'resultsDirectory' (lines '265'-'336').
13505	src/pipe/server/performancequery/DrmaaExecutor.java	266	Do not add empty strings
13506	src/pipe/server/performancequery/DrmaaExecutor.java	268	A switch statement does not contain a break
13507	src/pipe/server/performancequery/DrmaaExecutor.java	272	A method should have only one exit point, and that should be the last statement in the method
13508	src/pipe/server/performancequery/DrmaaExecutor.java	280	A method should have only one exit point, and that should be the last statement in the method
13509	src/pipe/server/performancequery/DrmaaExecutor.java	288	A method should have only one exit point, and that should be the last statement in the method
13510	src/pipe/server/performancequery/DrmaaExecutor.java	297	A method should have only one exit point, and that should be the last statement in the method
13511	src/pipe/server/performancequery/DrmaaExecutor.java	305	A method should have only one exit point, and that should be the last statement in the method
13512	src/pipe/server/performancequery/DrmaaExecutor.java	333	Avoid using final local variables, turn them into fields
13513	src/pipe/server/performancequery/MomentSSPExecutor.java	22	The class 'MomentSSPExecutor' has a Cyclomatic Complexity of 6 (Highest = 10).
13514	src/pipe/server/performancequery/MomentSSPExecutor.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13515	src/pipe/server/performancequery/MomentSSPExecutor.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13516	src/pipe/server/performancequery/MomentSSPExecutor.java	29	The method 'doCall' has a Cyclomatic Complexity of 10.
13517	src/pipe/server/performancequery/MomentSSPExecutor.java	29	The method doCall() has an NPath complexity of 378
13518	src/pipe/server/performancequery/MomentSSPExecutor.java	33	Avoid variables with short names like r
13519	src/pipe/server/performancequery/MomentSSPExecutor.java	33	Found 'DU'-anomaly for variable 'r' (lines '33'-'95').
13520	src/pipe/server/performancequery/MomentSSPExecutor.java	38	Found 'DU'-anomaly for variable 'nthMoment' (lines '38'-'95').
13521	src/pipe/server/performancequery/MomentSSPExecutor.java	42	Found 'DU'-anomaly for variable 'results' (lines '42'-'95').
13522	src/pipe/server/performancequery/MomentSSPExecutor.java	44	Found 'DU'-anomaly for variable 'count' (lines '44'-'95').
13523	src/pipe/server/performancequery/MomentSSPExecutor.java	45	Found 'DU'-anomaly for variable 'value' (lines '45'-'95').
13524	src/pipe/server/performancequery/MomentSSPExecutor.java	47	Avoid variables with short names like s1
13525	src/pipe/server/performancequery/MomentSSPExecutor.java	50	Found 'DD'-anomaly for variable 'line' (lines '50'-'78').
13526	src/pipe/server/performancequery/MomentSSPExecutor.java	50	Found 'DU'-anomaly for variable 'line' (lines '50'-'95').
13527	src/pipe/server/performancequery/MomentSSPExecutor.java	54	Avoid instantiating new objects inside loops
13528	src/pipe/server/performancequery/MomentSSPExecutor.java	54	Avoid variables with short names like s2
13529	src/pipe/server/performancequery/MomentSSPExecutor.java	55	Avoid variables with short names like x
13530	src/pipe/server/performancequery/MomentSSPExecutor.java	56	Avoid variables with short names like y
13531	src/pipe/server/performancequery/MomentSSPExecutor.java	58	Avoid if (x != y) ..; else ..;
13532	src/pipe/server/performancequery/MomentSSPExecutor.java	78	Found 'DD'-anomaly for variable 'line' (lines '78'-'78').
13533	src/pipe/server/performancequery/MomentSSPExecutor.java	78	Found 'DU'-anomaly for variable 'line' (lines '78'-'95').
13534	src/pipe/server/performancequery/MomentSSPExecutor.java	81	Found 'DD'-anomaly for variable 'currentMoment' (lines '81'-'84').
13535	src/pipe/server/performancequery/NodeAnalyserExecutor.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13536	src/pipe/server/performancequery/NodeAnalyserExecutor.java	29	Avoid using implementation types like 'ArrayList'; use the interface instead
13537	src/pipe/server/performancequery/NodeAnalyserExecutor.java	33	Avoid variables with short names like r
13538	src/pipe/server/performancequery/PerformanceQueryDrmaaSession.java	25	Found 'DD'-anomaly for variable 'jobId' (lines '25'-'51').
13539	src/pipe/server/performancequery/PerformanceQueryDrmaaSession.java	26	Found 'DD'-anomaly for variable 'info' (lines '26'-'54').
13540	src/pipe/server/performancequery/PerformanceQueryDrmaaSession.java	34	Avoid if (x != y) ..; else ..;
13541	src/pipe/server/performancequery/PerformanceQueryDrmaaSession.java	36	Found 'DD'-anomaly for variable 'jobArgs' (lines '36'-'37').
13542	src/pipe/server/performancequery/PerformanceQueryDrmaaSession.java	60	The String literal "Job " appears 5 times in this file; the first occurrence is on line 60
13543	src/pipe/server/performancequery/PerformanceQueryServerAction.java	1	A high number of imports can indicate a high degree of coupling within an object.
13544	src/pipe/server/performancequery/PerformanceQueryServerAction.java	45	The class 'PerformanceQueryServerAction' has a Cyclomatic Complexity of 4 (Highest = 17).
13545	src/pipe/server/performancequery/PerformanceQueryServerAction.java	47	To be compliant to J2EE, a webapp should not use any thread.
13546	src/pipe/server/performancequery/PerformanceQueryServerAction.java	52	This class has too many methods, consider refactoring it.
13547	src/pipe/server/performancequery/PerformanceQueryServerAction.java	54	Found non-transient, non-static member. Please mark as transient or provide accessors.
13548	src/pipe/server/performancequery/PerformanceQueryServerAction.java	57	Found non-transient, non-static member. Please mark as transient or provide accessors.
13549	src/pipe/server/performancequery/PerformanceQueryServerAction.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
13550	src/pipe/server/performancequery/PerformanceQueryServerAction.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
13551	src/pipe/server/performancequery/PerformanceQueryServerAction.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
13552	src/pipe/server/performancequery/PerformanceQueryServerAction.java	65	Avoid unused private fields such as 'statusPort'.
13553	src/pipe/server/performancequery/PerformanceQueryServerAction.java	65	Perhaps 'statusPort' could be replaced by a local variable.
13554	src/pipe/server/performancequery/PerformanceQueryServerAction.java	71	Avoid using implementation types like 'ArrayList'; use the interface instead
13555	src/pipe/server/performancequery/PerformanceQueryServerAction.java	71	Avoid using implementation types like 'ArrayList'; use the interface instead
13556	src/pipe/server/performancequery/PerformanceQueryServerAction.java	84	Avoid variables with short names like id
13557	src/pipe/server/performancequery/PerformanceQueryServerAction.java	86	Avoid using implementation types like 'HashMap'; use the interface instead
13558	src/pipe/server/performancequery/PerformanceQueryServerAction.java	86	Avoid using implementation types like 'HashMap'; use the interface instead
13559	src/pipe/server/performancequery/PerformanceQueryServerAction.java	133	To be compliant to J2EE, a webapp should not use any thread.
13560	src/pipe/server/performancequery/PerformanceQueryServerAction.java	204	Avoid excessively long variable names like finishedBeforeTermination
13561	src/pipe/server/performancequery/PerformanceQueryServerAction.java	204	Local variable 'finishedBeforeTermination' could be declared final
13562	src/pipe/server/performancequery/PerformanceQueryServerAction.java	239	Avoid using final local variables, turn them into fields
13563	src/pipe/server/performancequery/PerformanceQueryServerAction.java	314	Avoid using if...else statements without curly braces
13564	src/pipe/server/performancequery/PerformanceQueryServerAction.java	317	Avoid really long methods.
13565	src/pipe/server/performancequery/PerformanceQueryServerAction.java	317	The method 'evalutateOperation' has a Cyclomatic Complexity of 17.
13566	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Avoid variables with short names like ex
13567	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'325').
13568	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'334').
13569	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'343').
13570	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'356').
13571	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'365').
13572	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'370').
13573	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'378').
13574	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'392').
13575	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'406').
13576	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DD'-anomaly for variable 'ex' (lines '321'-'419').
13577	src/pipe/server/performancequery/PerformanceQueryServerAction.java	321	Found 'DU'-anomaly for variable 'ex' (lines '321'-'441').
13578	src/pipe/server/performancequery/PerformanceQueryServerAction.java	445	Document empty method
13579	src/pipe/server/performancequery/PerformanceQueryServerAction.java	452	Avoid using if statements without curly braces
13580	src/pipe/server/performancequery/PerformanceQueryServerAction.java	453	A method should have only one exit point, and that should be the last statement in the method
13581	src/pipe/server/performancequery/PerformanceQueryServerAction.java	469	Avoid using if...else statements without curly braces
13582	src/pipe/server/performancequery/PerformanceQueryServerAction.java	493	Assigning an Object to null is a code smell. Consider refactoring.
13583	src/pipe/server/performancequery/PerformanceQueryServerAction.java	494	Assigning an Object to null is a code smell. Consider refactoring.
13584	src/pipe/server/performancequery/PerformanceQueryServerAction.java	500	Found 'DD'-anomaly for variable 'translateQuery' (lines '500'-'505').
13585	src/pipe/server/performancequery/PerformanceQueryServerAction.java	515	Avoid variables with short names like r
13586	src/pipe/server/performancequery/PerformanceQueryServerAction.java	515	To be compliant to J2EE, a webapp should not use any thread.
13587	src/pipe/server/performancequery/PerformanceQueryServerAction.java	515	To be compliant to J2EE, a webapp should not use any thread.
13588	src/pipe/server/performancequery/PerformanceQueryServerAction.java	517	Avoid using ThreadGroup; it is not thread safe
13589	src/pipe/server/performancequery/PerformanceQueryServerAction.java	517	To be compliant to J2EE, a webapp should not use any thread.
13590	src/pipe/server/performancequery/PerformanceQueryServerAction.java	522	Found 'DD'-anomaly for variable 'endState' (lines '522'-'529').
13591	src/pipe/server/performancequery/PerformanceQueryServerAction.java	529	Found 'DD'-anomaly for variable 'endState' (lines '529'-'529').
13592	src/pipe/server/performancequery/PerformanceQueryServerAction.java	533	Found 'DD'-anomaly for variable 'endState' (lines '533'-'529').
13593	src/pipe/server/performancequery/PerformanceQueryServerAction.java	563	Avoid using if...else statements without curly braces
13594	src/pipe/server/performancequery/PoolWaiter.java	12	Avoid modifiers which are implied by the context
13595	src/pipe/server/performancequery/QueryServerException.java	15	Avoid variables with short names like e
13596	src/pipe/server/performancequery/ResultSender.java	12	Found non-transient, non-static member. Please mark as transient or provide accessors.
13597	src/pipe/server/performancequery/ResultSender.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
13598	src/pipe/server/performancequery/ResultSender.java	14	Private field 'out' could be made final; it is only initialized in the declaration or constructor.
13599	src/pipe/server/performancequery/ResultSender.java	46	Avoid instantiating new objects inside loops
13600	src/pipe/server/performancequery/ResultSender.java	59	Use block level rather than method level synchronization
13601	src/pipe/server/performancequery/ServerExceptionHandler.java	18	Found non-transient, non-static member. Please mark as transient or provide accessors.
13602	src/pipe/server/performancequery/ServerExceptionHandler.java	24	To be compliant to J2EE, a webapp should not use any thread.
13603	src/pipe/server/performancequery/ServerExceptionHandler.java	41	To be compliant to J2EE, a webapp should not use any thread.
13604	src/pipe/server/performancequery/ServerLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
13605	src/pipe/server/performancequery/ServerLoggingHandler.java	15	Avoid modifiers which are implied by the context
13606	src/pipe/server/performancequery/ServerLoggingHandler.java	15	Variables that are final and static should be in all caps.
13607	src/pipe/server/performancequery/ServerLoggingHandler.java	16	Avoid modifiers which are implied by the context
13608	src/pipe/server/performancequery/ServerLoggingHandler.java	16	Variables that are final and static should be in all caps.
13609	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
13610	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	35	Avoid using implementation types like 'ArrayList'; use the interface instead
13611	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	40	Avoid variables with short names like r
13612	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	40	Found 'DD'-anomaly for variable 'r' (lines '40'-'53').
13613	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	40	Found 'DU'-anomaly for variable 'r' (lines '40'-'76').
13614	src/pipe/server/performancequery/SimpleAnalysisExecutor.java	57	Avoid variables with short names like p
13615	src/pipe/server/performancequery/SimpleNode.java	18	Abstract classes should be named AbstractXXX
13616	src/pipe/server/performancequery/SimpleNode.java	22	Avoid variables with short names like id
13617	src/pipe/server/performancequery/SimpleNode.java	22	Found non-transient, non-static member. Please mark as transient or provide accessors.
13618	src/pipe/server/performancequery/SimpleNode.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
13619	src/pipe/server/performancequery/SimpleNode.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13620	src/pipe/server/performancequery/SimpleNode.java	30	Avoid variables with short names like id
13621	src/pipe/server/performancequery/SimpleNode.java	30	Parameter 'id' is not assigned and could be declared final
13622	src/pipe/server/performancequery/SimpleNode.java	30	Parameter 'parent' is not assigned and could be declared final
13623	src/pipe/server/performancequery/SimpleNode.java	30	Parameter 'type' is not assigned and could be declared final
13624	src/pipe/server/performancequery/SimpleValueNode.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
13625	src/pipe/server/performancequery/SimpleValueNode.java	27	Avoid variables with short names like id
13626	src/pipe/server/performancequery/SimpleValueNode.java	27	Parameter 'id' is not assigned and could be declared final
13627	src/pipe/server/performancequery/SimpleValueNode.java	27	Parameter 'parent' is not assigned and could be declared final
13628	src/pipe/server/performancequery/SimpleValueNode.java	27	Parameter 'type' is not assigned and could be declared final
13629	src/pipe/server/performancequery/SimpleValueNode.java	27	Parameter 'value' is not assigned and could be declared final
13630	src/pipe/server/performancequery/StatusIndicatorUpdater.java	12	Avoid variables with short names like ln
13631	src/pipe/server/performancequery/nodeanalyser/ArithComp.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
13632	src/pipe/server/performancequery/nodeanalyser/ArithComp.java	37	Found 'DU'-anomaly for variable 'lvalue' (lines '37'-'67').
13633	src/pipe/server/performancequery/nodeanalyser/ArithComp.java	38	Found 'DU'-anomaly for variable 'rvalue' (lines '38'-'67').
13634	src/pipe/server/performancequery/nodeanalyser/ArithComp.java	72	A switch statement does not contain a break
13635	src/pipe/server/performancequery/nodeanalyser/ArithOp.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
13636	src/pipe/server/performancequery/nodeanalyser/ArithOp.java	38	Found 'DU'-anomaly for variable 'lvalue' (lines '38'-'68').
13637	src/pipe/server/performancequery/nodeanalyser/ArithOp.java	39	Found 'DU'-anomaly for variable 'rvalue' (lines '39'-'68').
13638	src/pipe/server/performancequery/nodeanalyser/ArithOp.java	73	A switch statement does not contain a break
13639	src/pipe/server/performancequery/nodeanalyser/BinaryNodeAnalyser.java	12	Abstract classes should be named AbstractXXX
13640	src/pipe/server/performancequery/nodeanalyser/BoolNode.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
13641	src/pipe/server/performancequery/nodeanalyser/BoolNode.java	27	A getX() method which returns a boolean should be named isX()
13642	src/pipe/server/performancequery/nodeanalyser/CalculationNodeAnalyser.java	12	Abstract classes should be named AbstractXXX
13643	src/pipe/server/performancequery/nodeanalyser/DisCon.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
13644	src/pipe/server/performancequery/nodeanalyser/DisCon.java	19	It is somewhat confusing to have a field name matching the declaring class name
13645	src/pipe/server/performancequery/nodeanalyser/DisCon.java	41	Found 'DU'-anomaly for variable 'lvalue' (lines '41'-'60').
13646	src/pipe/server/performancequery/nodeanalyser/DisCon.java	42	Found 'DU'-anomaly for variable 'rvalue' (lines '42'-'60').
13647	src/pipe/server/performancequery/nodeanalyser/DisCon.java	65	A switch statement does not contain a break
13648	src/pipe/server/performancequery/nodeanalyser/InInterval.java	41	No need to call String.valueOf to append to a string.
13649	src/pipe/server/performancequery/nodeanalyser/InInterval.java	43	No need to call String.valueOf to append to a string.
13650	src/pipe/server/performancequery/nodeanalyser/InInterval.java	55	A switch statement does not contain a break
13651	src/pipe/server/performancequery/nodeanalyser/Negation.java	29	Local variable 'value' could be declared final
13652	src/pipe/server/performancequery/nodeanalyser/Negation.java	41	A switch statement does not contain a break
13653	src/pipe/server/performancequery/nodeanalyser/NodeAnalyser.java	14	Abstract classes should be named AbstractXXX
13654	src/pipe/server/performancequery/nodeanalyser/NodeAnalyser.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
13655	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserHelper.java	22	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
13656	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserHelper.java	122	Avoid variables with short names like n
13657	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserHelper.java	124	Avoid variables with short names like s
13658	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
13659	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserLoggingHandler.java	14	Avoid modifiers which are implied by the context
13660	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserLoggingHandler.java	14	Variables that are final and static should be in all caps.
13661	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserLoggingHandler.java	15	Avoid modifiers which are implied by the context
13662	src/pipe/server/performancequery/nodeanalyser/NodeAnalyserLoggingHandler.java	15	Variables that are final and static should be in all caps.
13663	src/pipe/server/performancequery/nodeanalyser/NumNode.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
13664	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
13665	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
13666	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	26	Overridable method 'checkChildValid' called during object construction
13667	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	27	Overridable method 'checkChildValid' called during object construction
13668	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	29	Avoid using if statements without curly braces
13669	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	37	Avoid using if...else statements without curly braces
13670	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	38	Avoid using if...else statements without curly braces
13671	src/pipe/server/performancequery/nodeanalyser/RangeNode.java	50	A switch statement does not contain a break
13672	src/pipe/server/performancequery/nodeanalyser/UnaryNodeAnalyser.java	12	Abstract classes should be named AbstractXXX
13673	src/pipe/server/performancequery/nodeanalyser/UnaryNodeAnalyser.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
13674	src/pipe/server/performancequery/nodeanalyser/ValueNodeAnalyser.java	14	Abstract classes should be named AbstractXXX
13675	src/pipe/server/performancequery/nodeanalyser/ValueNodeAnalyser.java	28	An empty method in an abstract class should be abstract instead
13676	src/pipe/server/performancequery/structure/ModFile.java	34	Assigning an Object to null is a code smell. Consider refactoring.
13677	src/pipe/server/performancequery/structure/ModFile.java	39	Found non-transient, non-static member. Please mark as transient or provide accessors.
13678	src/pipe/server/performancequery/structure/ModFile.java	41	Found non-transient, non-static member. Please mark as transient or provide accessors.
13679	src/pipe/server/performancequery/structure/ModFile.java	43	Found non-transient, non-static member. Please mark as transient or provide accessors.
13680	src/pipe/server/performancequery/structure/ModFile.java	45	Found non-transient, non-static member. Please mark as transient or provide accessors.
13681	src/pipe/server/performancequery/structure/ModFileBuilder.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
13682	src/pipe/server/performancequery/structure/ModFileBuilder.java	14	This final field could be made static
13683	src/pipe/server/performancequery/structure/ModFileBuilder.java	16	Avoid excessively long variable names like currentFileContents
13684	src/pipe/server/performancequery/structure/ModFileBuilder.java	16	Found non-transient, non-static member. Please mark as transient or provide accessors.
13685	src/pipe/server/performancequery/structure/ModFileBuilder.java	17	Found non-transient, non-static member. Please mark as transient or provide accessors.
13686	src/pipe/server/performancequery/structure/ModFileBuilder.java	19	Found non-transient, non-static member. Please mark as transient or provide accessors.
13687	src/pipe/server/performancequery/structure/ModFileBuilder.java	20	Found non-transient, non-static member. Please mark as transient or provide accessors.
13688	src/pipe/server/performancequery/structure/ModFileBuilder.java	28	Avoid variables with short names like m
13689	src/pipe/server/performancequery/structure/ModFileBuilder.java	44	Use explicit scoping instead of the default package private level
13690	src/pipe/server/performancequery/structure/ModFileBuilder.java	49	Use explicit scoping instead of the default package private level
13691	src/pipe/server/performancequery/structure/ModFileBuilder.java	53	Avoid excessively long variable names like steadyStateModFile
13692	src/pipe/server/performancequery/structure/ModFileBuilder.java	62	Use explicit scoping instead of the default package private level
13693	src/pipe/server/performancequery/structure/ModFileBuilder.java	68	Avoid variables with short names like m
13694	src/pipe/server/performancequery/structure/ModFileBuilder.java	73	Avoid variables with short names like m
13695	src/pipe/server/performancequery/structure/ModFileBuilder.java	98	Avoid using final local variables, turn them into fields
13696	src/pipe/server/performancequery/structure/ModFileBuilder.java	99	Avoid using final local variables, turn them into fields
13697	src/pipe/server/performancequery/structure/ModFileBuilder.java	101	Avoid variables with short names like m
13698	src/pipe/server/performancequery/structure/OperationSubtree.java	11	Found non-transient, non-static member. Please mark as transient or provide accessors.
13699	src/pipe/server/performancequery/structure/OperationSubtree.java	19	Assigning an Object to null is a code smell. Consider refactoring.
13700	src/pipe/server/performancequery/structure/ParentSubtree.java	18	Abstract classes should be named AbstractXXX
13701	src/pipe/server/performancequery/structure/ParentSubtree.java	21	Found non-transient, non-static member. Please mark as transient or provide accessors.
13702	src/pipe/server/performancequery/structure/ParentSubtree.java	39	Avoid variables with short names like r
13703	src/pipe/server/performancequery/structure/ParentSubtree.java	39	Found 'DD'-anomaly for variable 'r' (lines '39'-'42').
13704	src/pipe/server/performancequery/structure/ParentSubtree.java	42	Found 'DU'-anomaly for variable 'r' (lines '42'-'58').
13705	src/pipe/server/performancequery/structure/ResultGetter.java	10	Avoid modifiers which are implied by the context
13706	src/pipe/server/performancequery/structure/ResultSubtree.java	14	Found non-transient, non-static member. Please mark as transient or provide accessors.
13707	src/pipe/server/performancequery/structure/ResultSubtree.java	14	Use explicit scoping instead of the default package private level
13708	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Avoid using implementation types like 'Vector'; use the interface instead
13709	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Avoid using implementation types like 'Vector'; use the interface instead
13710	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Consider replacing this Vector with the newer java.util.List
13711	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Found non-transient, non-static member. Please mark as transient or provide accessors.
13712	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Use ArrayList instead of Vector
13713	src/pipe/server/performancequery/structure/SequentialSubtree.java	23	Use explicit scoping instead of the default package private level
13714	src/pipe/server/performancequery/structure/SequentialSubtree.java	44	Avoid using implementation types like 'ArrayList'; use the interface instead
13715	src/pipe/server/performancequery/structure/SequentialSubtree.java	44	Avoid using implementation types like 'ArrayList'; use the interface instead
13716	src/pipe/server/performancequery/structure/SequentialSubtree.java	57	Avoid variables with short names like w
13717	src/pipe/server/performancequery/structure/SequentialSubtree.java	57	Found 'DD'-anomaly for variable 'w' (lines '57'-'60').
13718	src/pipe/server/performancequery/structure/SequentialSubtree.java	60	Found 'DD'-anomaly for variable 'w' (lines '60'-'60').
13719	src/pipe/server/performancequery/structure/StructureLoggingHandler.java	12	An Interface should be used only to model a behaviour; consider converting this to a class.
13720	src/pipe/server/performancequery/structure/StructureLoggingHandler.java	14	Avoid modifiers which are implied by the context
13721	src/pipe/server/performancequery/structure/StructureLoggingHandler.java	14	Variables that are final and static should be in all caps.
13722	src/pipe/server/performancequery/structure/StructureLoggingHandler.java	15	Avoid modifiers which are implied by the context
13723	src/pipe/server/performancequery/structure/StructureLoggingHandler.java	15	Variables that are final and static should be in all caps.
13724	src/pipe/server/performancequery/structure/Subtree.java	23	Abstract classes should be named AbstractXXX
13725	src/pipe/server/performancequery/structure/Subtree.java	24	This class has too many methods, consider refactoring it.
13726	src/pipe/server/performancequery/structure/Subtree.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13727	src/pipe/server/performancequery/structure/Subtree.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13728	src/pipe/server/performancequery/structure/Subtree.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13729	src/pipe/server/performancequery/structure/Subtree.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13730	src/pipe/server/performancequery/structure/Subtree.java	30	Avoid excessively long variable names like childSubtreesByRole
13731	src/pipe/server/performancequery/structure/Subtree.java	30	Avoid using implementation types like 'HashMap'; use the interface instead
13732	src/pipe/server/performancequery/structure/Subtree.java	30	Avoid using implementation types like 'HashMap'; use the interface instead
13733	src/pipe/server/performancequery/structure/Subtree.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
13734	src/pipe/server/performancequery/structure/Subtree.java	32	Found non-transient, non-static member. Please mark as transient or provide accessors.
13735	src/pipe/server/performancequery/structure/Subtree.java	36	Found non-transient, non-static member. Please mark as transient or provide accessors.
13736	src/pipe/server/performancequery/structure/Subtree.java	59	Overridable method 'getType' called during object construction
13737	src/pipe/server/performancequery/structure/Subtree.java	64	Use equals() to compare object references.
13738	src/pipe/server/performancequery/structure/Subtree.java	91	Found 'DD'-anomaly for variable 'evaluated' (lines '91'-'96').
13739	src/pipe/server/performancequery/structure/Subtree.java	96	Found 'DD'-anomaly for variable 'evaluated' (lines '96'-'96').
13740	src/pipe/server/performancequery/structure/Subtree.java	117	Avoid using implementation types like 'ArrayList'; use the interface instead
13741	src/pipe/server/performancequery/structure/Subtree.java	117	Avoid using implementation types like 'ArrayList'; use the interface instead
13742	src/pipe/server/performancequery/structure/SubtreeComparator.java	14	Avoid variables with short names like a
13743	src/pipe/server/performancequery/structure/SubtreeComparator.java	14	Avoid variables with short names like b
13744	src/pipe/server/performancequery/structure/SubtreeComparator.java	14	Parameter 'a' is not assigned and could be declared final
13745	src/pipe/server/performancequery/structure/SubtreeComparator.java	14	Parameter 'b' is not assigned and could be declared final
13746	src/pipe/server/performancequery/structure/SubtreeHelper.java	24	All methods are static. Consider using Singleton instead. Alternatively, you could add a private constructor or make the class abstract to silence this warning.
13747	src/pipe/server/performancequery/structure/SubtreeHelper.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13748	src/pipe/server/performancequery/structure/SubtreeHelper.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13749	src/pipe/server/performancequery/structure/SubtreeHelper.java	31	Avoid variables with short names like s
13750	src/pipe/server/performancequery/structure/SubtreeHelper.java	39	Consider simply returning the value vs storing it in local variable 'root'
13751	src/pipe/server/performancequery/structure/SubtreeHelper.java	42	Avoid using implementation types like 'ArrayList'; use the interface instead
13752	src/pipe/server/performancequery/structure/SubtreeHelper.java	42	Avoid using implementation types like 'ArrayList'; use the interface instead
13753	src/pipe/server/performancequery/structure/SubtreeHelper.java	63	Avoid variables with short names like s
13754	src/pipe/server/performancequery/structure/SubtreeHelper.java	110	Avoid variables with short names like s
13755	src/pipe/server/performancequery/structure/SubtreeHelper.java	114	Found 'DD'-anomaly for variable 'root' (lines '114'-'121').
13756	src/pipe/server/performancequery/structure/SubtreeHelper.java	114	Found 'DU'-anomaly for variable 'root' (lines '114'-'124').
13757	src/pipe/server/performancequery/structure/SubtreeHelper.java	164	Found 'DD'-anomaly for variable 'node' (lines '164'-'171').
13758	src/pipe/server/performancequery/structure/SubtreeHelper.java	171	A method should have only one exit point, and that should be the last statement in the method
13759	src/pipe/server/performancequery/structure/SubtreeHelper.java	171	Found 'DU'-anomaly for variable 'node' (lines '171'-'180').
13760	src/pipe/server/performancequery/structure/SubtreeHelper.java	184	Avoid variables with short names like t
13761	src/pipe/server/performancequery/structure/SubtreeHelper.java	191	Avoid using final local variables, turn them into fields
13762	src/pipe/server/performancequery/structure/SubtreeHelper.java	200	Prefer StringBuffer over += for concatenating strings
13763	src/pipe/server/performancequery/structure/SubtreeHelper.java	209	Avoid using implementation types like 'ArrayList'; use the interface instead
13764	src/pipe/server/performancequery/structure/SubtreeHelper.java	209	Avoid using implementation types like 'ArrayList'; use the interface instead
13765	src/pipe/server/performancequery/structure/TranslateQueryTree.java	24	This class has too many methods, consider refactoring it.
13766	src/pipe/server/performancequery/structure/TranslateQueryTree.java	26	Found non-transient, non-static member. Please mark as transient or provide accessors.
13767	src/pipe/server/performancequery/structure/TranslateQueryTree.java	27	Found non-transient, non-static member. Please mark as transient or provide accessors.
13768	src/pipe/server/performancequery/structure/TranslateQueryTree.java	27	It is somewhat confusing to have a field name with the same name as a method
13769	src/pipe/server/performancequery/structure/TranslateQueryTree.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13770	src/pipe/server/performancequery/structure/TranslateQueryTree.java	28	Avoid using implementation types like 'ArrayList'; use the interface instead
13771	src/pipe/server/performancequery/structure/TranslateQueryTree.java	28	Found non-transient, non-static member. Please mark as transient or provide accessors.
13772	src/pipe/server/performancequery/structure/TranslateQueryTree.java	29	Avoid using implementation types like 'HashMap'; use the interface instead
13773	src/pipe/server/performancequery/structure/TranslateQueryTree.java	29	Avoid using implementation types like 'HashMap'; use the interface instead
13774	src/pipe/server/performancequery/structure/TranslateQueryTree.java	29	Found non-transient, non-static member. Please mark as transient or provide accessors.
13775	src/pipe/server/performancequery/structure/TranslateQueryTree.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13776	src/pipe/server/performancequery/structure/TranslateQueryTree.java	30	Avoid using implementation types like 'ArrayList'; use the interface instead
13777	src/pipe/server/performancequery/structure/TranslateQueryTree.java	30	Found non-transient, non-static member. Please mark as transient or provide accessors.
13778	src/pipe/server/performancequery/structure/TranslateQueryTree.java	37	Avoid excessively long variable names like performanceMeasures
13779	src/pipe/server/performancequery/structure/TranslateQueryTree.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
13780	src/pipe/server/performancequery/structure/TranslateQueryTree.java	40	Avoid using implementation types like 'ArrayList'; use the interface instead
13781	src/pipe/server/performancequery/structure/TranslateQueryTree.java	44	Avoid using implementation types like 'ArrayList'; use the interface instead
13782	src/pipe/server/performancequery/structure/TranslateQueryTree.java	44	Avoid using implementation types like 'ArrayList'; use the interface instead
13783	src/pipe/server/performancequery/structure/TranslateQueryTree.java	84	The String literal "}\n" appears 20 times in this file; the first occurrence is on line 84
13784	src/pipe/server/performancequery/structure/TranslateQueryTree.java	144	Method names should not start with capital letters
13785	src/pipe/server/performancequery/structure/TranslateQueryTree.java	164	Avoid using final local variables, turn them into fields
13786	src/pipe/server/performancequery/structure/TranslateQueryTree.java	164	The String literal "argument not of type valuenode!" appears 5 times in this file; the first occurrence is on line 164
13787	src/pipe/server/performancequery/structure/TranslateQueryTree.java	189	Method names should not start with capital letters
13788	src/pipe/server/performancequery/structure/TranslateQueryTree.java	199	Avoid using final local variables, turn them into fields
13789	src/pipe/server/performancequery/structure/TranslateQueryTree.java	204	Found 'DU'-anomaly for variable 'densityNode' (lines '204'-'237').
13790	src/pipe/server/performancequery/structure/TranslateQueryTree.java	210	Found 'DU'-anomaly for variable 'num' (lines '210'-'237').
13791	src/pipe/server/performancequery/structure/TranslateQueryTree.java	214	Avoid using final local variables, turn them into fields
13792	src/pipe/server/performancequery/structure/TranslateQueryTree.java	223	Avoid using final local variables, turn them into fields
13793	src/pipe/server/performancequery/structure/TranslateQueryTree.java	228	Avoid variables with short names like m
13794	src/pipe/server/performancequery/structure/TranslateQueryTree.java	239	Method names should not start with capital letters
13795	src/pipe/server/performancequery/structure/TranslateQueryTree.java	247	Avoid variables with short names like m
13796	src/pipe/server/performancequery/structure/TranslateQueryTree.java	258	Method names should not start with capital letters
13797	src/pipe/server/performancequery/structure/TranslateQueryTree.java	270	Avoid variables with short names like m
13798	src/pipe/server/performancequery/structure/TranslateQueryTree.java	281	Method names should not start with capital letters
13799	src/pipe/server/performancequery/structure/TranslateQueryTree.java	290	Avoid using final local variables, turn them into fields
13800	src/pipe/server/performancequery/structure/TranslateQueryTree.java	454	A method should have only one exit point, and that should be the last statement in the method
13801	src/pipe/server/performancequery/structure/TranslateQueryTree.java	474	Avoid instantiating String objects; this is usually unnecessary.
13802	src/pipe/server/performancequery/structure/TranslateQueryTree.java	482	Prefer StringBuffer over += for concatenating strings
13803	src/pipe/server/performancequery/structure/TranslateQueryTree.java	488	Prefer StringBuffer over += for concatenating strings
13804	src/pipe/server/performancequery/structure/TranslateQueryTree.java	586	Found 'DU'-anomaly for variable 'groupCount' (lines '586'-'609').
13805	src/pipe/server/performancequery/structure/TranslateQueryTree.java	607	Found 'DU'-anomaly for variable 'groupCount' (lines '607'-'609').
13806	src/pipe/server/performancequery/structure/TranslateQueryTree.java	677	Avoid excessively long variable names like arcFromTransitions
13807	src/pipe/server/performancequery/structure/TranslateQueryTree.java	677	Found 'DU'-anomaly for variable 'arcFromTransitions' (lines '677'-'750').
13808	src/pipe/server/performancequery/structure/ValueSubtree.java	13	Found non-transient, non-static member. Please mark as transient or provide accessors.
13809	src/pipe/server/serverCommon/DrmaaSession.java	1	Package name contains upper case characters
13810	src/pipe/server/serverCommon/DrmaaSession.java	11	Abstract classes should be named AbstractXXX
13811	src/pipe/server/serverCommon/DrmaaSession.java	14	It is somewhat confusing to have a field name matching the declaring class name
13812	src/pipe/server/serverCommon/DrmaaSession.java	16	Use block level rather than method level synchronization
13813	src/pipe/server/serverCommon/DrmaaSession.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13814	src/pipe/server/serverCommon/PathsWrapper.java	1	Package name contains upper case characters
13815	src/pipe/server/serverCommon/PathsWrapper.java	20	The class 'PathsWrapper' has a Cyclomatic Complexity of 2 (Highest = 15).
13816	src/pipe/server/serverCommon/PathsWrapper.java	23	The Logger variable declaration does not contain the static and final modifiers
13817	src/pipe/server/serverCommon/PathsWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13818	src/pipe/server/serverCommon/PathsWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13819	src/pipe/server/serverCommon/PathsWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13820	src/pipe/server/serverCommon/PathsWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13821	src/pipe/server/serverCommon/PathsWrapper.java	25	Found non-transient, non-static member. Please mark as transient or provide accessors.
13822	src/pipe/server/serverCommon/PathsWrapper.java	26	Avoid excessively long variable names like probInIntervalPath
13823	src/pipe/server/serverCommon/PathsWrapper.java	33	The constructor 'PathsWrapper' has a Cyclomatic Complexity of 15.
13824	src/pipe/server/serverCommon/PathsWrapper.java	40	Avoid excessively long variable names like pathConfigFilePath
13825	src/pipe/server/serverCommon/PathsWrapper.java	45	Avoid assignments in operands
13826	src/pipe/server/serverCommon/PathsWrapper.java	104	Avoid throwing raw exception types.
13827	src/pipe/server/serverCommon/PathsWrapper.java	104	New exception is thrown in catch block, original stack trace may be lost
13828	src/pipe/server/serverCommon/PathsWrapper.java	109	Avoid throwing raw exception types.
13829	src/pipe/server/serverCommon/PathsWrapper.java	109	New exception is thrown in catch block, original stack trace may be lost
13830	src/pipe/server/serverCommon/PathsWrapper.java	115	Avoid throwing raw exception types.
13831	src/pipe/server/serverCommon/PathsWrapper.java	115	New exception is thrown in catch block, original stack trace may be lost
13832	src/pipe/server/serverCommon/ServerAction.java	17	Package name contains upper case characters
13833	src/pipe/server/serverCommon/ServerAction.java	48	The class 'ServerAction' has a Cyclomatic Complexity of 3 (Highest = 11).
13834	src/pipe/server/serverCommon/ServerAction.java	48	To be compliant to J2EE, a webapp should not use any thread.
13835	src/pipe/server/serverCommon/ServerAction.java	48	Too many fields
13836	src/pipe/server/serverCommon/ServerAction.java	50	Avoid variables with short names like e
13837	src/pipe/server/serverCommon/ServerAction.java	53	Avoid variables with short names like p
13838	src/pipe/server/serverCommon/ServerAction.java	58	Found non-transient, non-static member. Please mark as transient or provide accessors.
13839	src/pipe/server/serverCommon/ServerAction.java	58	It is somewhat confusing to have a field name matching the declaring class name
13840	src/pipe/server/serverCommon/ServerAction.java	58	To be compliant to J2EE, a webapp should not use any thread.
13841	src/pipe/server/serverCommon/ServerAction.java	59	Found non-transient, non-static member. Please mark as transient or provide accessors.
13842	src/pipe/server/serverCommon/ServerAction.java	61	Found non-transient, non-static member. Please mark as transient or provide accessors.
13843	src/pipe/server/serverCommon/ServerAction.java	62	Found non-transient, non-static member. Please mark as transient or provide accessors.
13844	src/pipe/server/serverCommon/ServerAction.java	63	Found non-transient, non-static member. Please mark as transient or provide accessors.
13845	src/pipe/server/serverCommon/ServerAction.java	72	Avoid using implementation types like 'ArrayList'; use the interface instead
13846	src/pipe/server/serverCommon/ServerAction.java	72	Avoid using implementation types like 'ArrayList'; use the interface instead
13847	src/pipe/server/serverCommon/ServerAction.java	73	Avoid using implementation types like 'HashMap'; use the interface instead
13848	src/pipe/server/serverCommon/ServerAction.java	73	Avoid using implementation types like 'HashMap'; use the interface instead
13849	src/pipe/server/serverCommon/ServerAction.java	82	Avoid using implementation types like 'HashMap'; use the interface instead
13850	src/pipe/server/serverCommon/ServerAction.java	82	Avoid using implementation types like 'HashMap'; use the interface instead
13851	src/pipe/server/serverCommon/ServerAction.java	84	Avoid variables with short names like in
13852	src/pipe/server/serverCommon/ServerAction.java	87	Use explicit scoping instead of the default package private level
13853	src/pipe/server/serverCommon/ServerAction.java	94	Avoid variables with short names like id
13854	src/pipe/server/serverCommon/ServerAction.java	96	Avoid using implementation types like 'HashMap'; use the interface instead
13855	src/pipe/server/serverCommon/ServerAction.java	96	Avoid using implementation types like 'HashMap'; use the interface instead
13856	src/pipe/server/serverCommon/ServerAction.java	102	Avoid excessively long variable names like analysisLogFilePath
13857	src/pipe/server/serverCommon/ServerAction.java	111	Avoid printStackTrace(); use a logger call instead.
13858	src/pipe/server/serverCommon/ServerAction.java	117	Avoid reassigning parameters such as 'id'
13859	src/pipe/server/serverCommon/ServerAction.java	117	Avoid variables with short names like id
13860	src/pipe/server/serverCommon/ServerAction.java	119	Avoid using implementation types like 'HashMap'; use the interface instead
13861	src/pipe/server/serverCommon/ServerAction.java	119	Avoid using implementation types like 'HashMap'; use the interface instead
13862	src/pipe/server/serverCommon/ServerAction.java	129	When instantiating a SimpleDateFormat object, specify a Locale
13863	src/pipe/server/serverCommon/ServerAction.java	130	When instantiating a SimpleDateFormat object, specify a Locale
13864	src/pipe/server/serverCommon/ServerAction.java	146	Avoid instantiating new objects inside loops
13865	src/pipe/server/serverCommon/ServerAction.java	166	Avoid using final local variables, turn them into fields
13866	src/pipe/server/serverCommon/ServerAction.java	167	When instantiating a SimpleDateFormat object, specify a Locale
13867	src/pipe/server/serverCommon/ServerAction.java	172	Avoid really long methods.
13868	src/pipe/server/serverCommon/ServerAction.java	172	Found 'UR'-anomaly for variable 'extraParams' (lines '172'-'303').
13869	src/pipe/server/serverCommon/ServerAction.java	172	The method 'run' has a Cyclomatic Complexity of 11.
13870	src/pipe/server/serverCommon/ServerAction.java	184	A high ratio of statements to labels in a switch statement. Consider refactoring.
13871	src/pipe/server/serverCommon/ServerAction.java	192	Avoid excessively long variable names like performanceMeasure
13872	src/pipe/server/serverCommon/ServerAction.java	213	To be compliant to J2EE, a webapp should not use any thread.
13873	src/pipe/server/serverCommon/ServerAction.java	213	To be compliant to J2EE, a webapp should not use any thread.
13874	src/pipe/server/serverCommon/ServerAction.java	266	To be compliant to J2EE, a webapp should not use any thread.
13875	src/pipe/server/serverCommon/ServerAction.java	280	Avoid using final local variables, turn them into fields
13876	src/pipe/server/serverCommon/ServerAction.java	366	Avoid printStackTrace(); use a logger call instead.
13877	src/pipe/server/serverCommon/ThreadGroupNameFilter.java	4	Package name contains upper case characters
13878	src/pipe/server/serverCommon/ThreadGroupNameFilter.java	15	Found non-transient, non-static member. Please mark as transient or provide accessors.
13879	src/pipe/server/serverCommon/ThreadGroupNameFilter.java	18	Avoid using ThreadGroup; it is not thread safe
13880	src/pipe/server/serverCommon/ThreadGroupNameFilter.java	27	Avoid using ThreadGroup; it is not thread safe